GeneSeqer. Version of March 12, 2006. Date run: Mon Aug 28 17:14:04 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-ErUvv/C01HBa0163B20/C01HBa0163B20.seq.screen ________________________________________________________________________________ Sequence 1: C01HBa0163B20.1, from 1 to 134102, both strands analyzed. ... started at: Mon Aug 28 17:38:23 2006 EST library file: /tmp/cxgn-bacpublish-resources-L1Mr0E/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 6 ... matches indexed, elapsed seconds = 6 HitsTableSize = 209 EST library file: /tmp/cxgn-bacpublish-resources-L1Mr0E/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 5 ... matches indexed, elapsed seconds = 6 HitsTableSize = 79 ******************************************************************************** EST sequence 211 +strand 737 n (File: SGN-E578078+) 1 GAACTCATAA TGCTCATACC TGGTCCGAAA AGCAGTCTTG GGCACATCTG CTGCTCGTAT 61 TTTCAATTGA TGATAACCAG ATCTCAAGTC GATTTTTGAG AAGGTACAAG CACCTTGTAA 121 CTGATCGAAC AAATCATCAA TGTGAGGAAG ATATTTTCGA AAATTCTCTC ACTATGGTGA 181 TTGACTCAAT TGGAGGAATA TCGGACTCAA GATCTTTGAC TCTTACAATA TGGTAAATTC 241 ACACTTTTGA GATTATTTTG CAATATTTTA AACAAGAGAT GATATGACCT TTAGGAATTA 301 AATTACTGCC ATTCCACTCT AAGACAGGTT CATTAGGAAA GTTGAATTTA ACAACTCTTG 361 TTCGACAGTC TATGGAAGCA TAACAAGCAT GCAACCAATC CATTCCCAAG ATAAAATAAA 421 AATCGACCAT ATCGAATTCC ACCAAATCCA CCCAAGTAAC TCTATTGGGG AAATATATAG 481 GATAACTCCT AAAGACTCTT CTAGCAACAA TGGAGTCACC TACCGGGGTT GTAACAAAAA 541 ATATTTTCTC AAAGGCCTGG CGTCGAATAT GAAGAGACAT ACTCACCCGT TATGGATGCA 601 ATAACATTGG TTTATCTCAT TAGTTTCACA GTCCATGAGC AACTTGAAAT GCATTTGATG 661 GATGTGGTTA CAACCTACCT TTATGGATCA TTTAAATATG AGATATACAT GAAAATTCCT 721 GAAGGATTTG CGATTGC Predicted gene structure (within gDNA segment 10274 to 3279): Exon 1 5409 5396 ( 14 n); cDNA 509 522 ( 14 n); score: 0.643 Intron 1 5395 4274 (1122 n); Pd: 0.191 (s: 0), Pa: 0.000 (s: 0.77) Exon 2 4273 4063 ( 211 n); cDNA 523 734 ( 212 n); score: 0.893 MATCH C01HBa0163B20.1- SGN-E578078+ 0.893 225 0.305 C PGS_C01HBa0163B20.1-_SGN-E578078+ (5409 5396,4273 4063) Alignment (genomic DNA sequence = upper lines): AATGGTCTCG CAGAGTCATT AATTAAACGT TTTCAATTAA TAGCAAGACC ATTGCTTATG 5350 ||||| || | | AATGGAGTCA CCTA...... .......... .......... .......... .......... 522 AAAACTAAGT TTCCCACTTC TGTGTGGGGA CATGCAATTT TGCATGCTGC AACACTTATT 5290 .......... .......... .......... .......... .......... .......... 522 CGTTTCAGAC CGACAAGTTA TCATAAGGTT TTTGCATTGC AATTGGTTAT GAGTCAAGAA 5230 .......... .......... .......... .......... .......... .......... 522 CCTAATATAT CCCATCTAAG AATTTTTGGA AGTGTTGTAC ATGTGCCTGT GTCACCACCA 5170 .......... .......... .......... .......... .......... .......... 522 AATCGCAATA AGATGGGCTC TCAAAGAAGG TTAGGAATAT ATGTTGGGTT TGAGTCACCC 5110 .......... .......... .......... .......... .......... .......... 522 TCCATTATTC TCTATCTTAA ACCATTGACT GGAGACATGT TTACTGCTAG ATTTGCAGAT 5050 .......... .......... .......... .......... .......... .......... 522 TGTCGGTTTG ATGAGACACT TTTCTCAAAA TTAGGGGGAG AGAATAGTGA AATAAAATGA 4990 .......... .......... .......... .......... .......... .......... 522 GAAATTTTGT GGAAAAATTT ATTATTGTCT CATATTGATC CATATTATTC TACTTGCGAA 4930 .......... .......... .......... .......... .......... .......... 522 CAAGAAGTAC AAAAGATTAT TCATCTGCAG AAAATTGCTA ATCAAATGTC AGACGCATTT 4870 .......... .......... .......... .......... .......... .......... 522 ACAGATTTGA AAAGGATTAC TAAATCACAT ATTCCTGCAG AGAATGTCCC AATTCGAATT 4810 .......... .......... .......... .......... .......... .......... 522 GATGTCCCTA AAGGACCATC CACTAGTGTC ATATCTAATG AGTCAAAAAC ACACGTAAAG 4750 .......... .......... .......... .......... .......... .......... 522 CGTGGTAAAC CATTGGGGTC TAAGGATCAA AATCCTAGAA AAAGAAAGAT TAAATGTCAA 4690 .......... .......... .......... .......... .......... .......... 522 GATGACACTA TGAAAAAATC TCATATGGAA GTTCAAAATT TGAATAAGTC TGATATTCAT 4630 .......... .......... .......... .......... .......... .......... 522 GAAAGAATCA ATGAACTTGA AACTCAAAGA AATAATGAAC TATCCATAAA TTTAAGAGAT 4570 .......... .......... .......... .......... .......... .......... 522 GTTGAAACTA ATATGAATCA ATCAGAAATA GTGGTTGATT ATGTCTTTGC ATATAATGTT 4510 .......... .......... .......... .......... .......... .......... 522 GCAACAAATA TCATGCAAGA TAATGAGGAT CATGAACCTC AATCTGTTAT AGAATGTCGA 4450 .......... .......... .......... .......... .......... .......... 522 CAACGAAATG ATTGGCCAAA ATGGCAAAAA GCAATTCAAT CAGAGTTGAA TTCACTTGCC 4390 .......... .......... .......... .......... .......... .......... 522 AAGCGTGAAG TTTTTGGACC TATAGTTCAA ACACCTTATG GAATTAAACC TGTTGGTTAC 4330 .......... .......... .......... .......... .......... .......... 522 AAATGAATTT TTTTGCGAAA AAGAAATGAG AAAAAATAAC ATACAAAGGT ATAAAGCACG 4270 | | .......... .......... .......... .......... .......... ......CCGG 526 CCTTGTGGCA CAAGA-ATTT TCTCAAAGGC CTGGCGTCGA CTATGAAGAG ACATACTCAC 4211 |||| || || | |||| |||||||||| |||||||||| ||||||||| |||||||||| GGTTGTAACA AAAAATATTT TCTCAAAGGC CTGGCGTCGA ATATGAAGAG ACATACTCAC 586 CCGTTTTGGA TGCAATAATA TTGCATTATC TCATTAGTTT CACAGTCCAT GAGCAACTTG 4151 ||||| |||| |||||||| | ||| ||||| |||||||||| |||||||||| |||||||||| CCGTTATGGA TGCAATAACA TTGGTTTATC TCATTAGTTT CACAGTCCAT GAGCAACTTG 646 AAATGCATTT GATGGATGTG GTTATAGCCT ACCTTTATGG ATCACTTGAT AATGAGATAT 4091 |||||||||| |||||||||| |||| | ||| |||||||||| |||| || | ||||||||| AAATGCATTT GATGGATGTG GTTACAACCT ACCTTTATGG ATCATTTAAA TATGAGATAT 706 ACATGAAAAT TCTTGAAGGA TTTGCGAT 4063 |||||||||| || ||||||| |||||||| ACATGAAAAT TCCTGAAGGA TTTGCGAT 734 hqPGS_C01HBa0163B20.1-_SGN-E578078+ (4273 4063) ******************************************************************************** EST sequence 28 +strand 649 n (File: SGN-E539761+) 1 TACGTCAGAA ACTAGGAGTC TTGACAAACA GGTGGAGTTT CAAGTCATTC AGAACGAGAG 61 CGATTTAAAG GAACCTGAAG AGGAGGATCA AGAGCCACAG ACTGAAACTG ATATTCCAGA 121 ATCTATGCCA TCAGATATCC ATCAGAGTAT AGCTCAAGAT CGGCCAAGGA GGGTTGGAGT 181 TCGGCCACCT ACGAGGTATG GTTTTGAGGA CATGGTGGGT TATGCACTGC AGGTTGCTGA 241 AGAGGTAGAT ACATCTGAGC CGTCTACTTA CAAAGAAGCC ATTTTAAGTT CTGATTCTGA 301 AAAATGGTTT GCCGCTATGG GAGATGAGAT GGAGTCCCTA CACAAGAATC AGACATGGGA 361 TCTGGTCATA CAGCCTTCGG GGAGAAAGAT TATTACTTGC AAATGGGTTT TCAAGAAGAA 421 GGAAGGGATA TCACCAGCAG AAGGAGTCAA GTATAAAGTC AGGGTTGTTG CTAGAGGTTT 481 CAACCAAAGA GAGGGAGTGG ACTACAATGA GATCTTCTCA CCAGTGGTCA GACATACTTC 541 CATCCGAGTG TTACTAGCGA TAGTTGCACA TCAGAATCTG GAGCTTGAAA CACTTGATGT 601 GAAGACAGCG TTTCTACATG GAGAGTTGGA GGAAGAGATA TACATGACT Predicted gene structure (within gDNA segment 8843 to 10827): Exon 1 9569 10217 ( 649 n); cDNA 1 649 ( 649 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E539761+ 0.983 649 1.000 C PGS_C01HBa0163B20.1+_SGN-E539761+ (9569 10217) Alignment (genomic DNA sequence = upper lines): TACGTCAGAA ACTGGGAGTC TTGACAAACA GGTGGAGTTT CAAGTCATTC AGAACGAGAG 9628 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| TACGTCAGAA ACTAGGAGTC TTGACAAACA GGTGGAGTTT CAAGTCATTC AGAACGAGAG 60 AGATTTAAAG GAACCTGAAG AGGAGGATCA AGAGCCACAG ACAGAAACTG ATATTCCAGA 9688 ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| CGATTTAAAG GAACCTGAAG AGGAGGATCA AGAGCCACAG ACTGAAACTG ATATTCCAGA 120 ATCTATGCCA TCAGATATCC ATCAGAGTAT AGCTCAAGAT CGGCCAAGGA GGGTTGGAGT 9748 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTATGCCA TCAGATATCC ATCAGAGTAT AGCTCAAGAT CGGCCAAGGA GGGTTGGAGT 180 TCGGCCACCT ACGAGGTATG GTTTTGAGGA CATGGTGGGT TATGCACTGC AGGTTGCTGA 9808 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGCCACCT ACGAGGTATG GTTTTGAGGA CATGGTGGGT TATGCACTGC AGGTTGCTGA 240 AGAGGTAGAT ACATCTGAGC CGTCTACTTA CAAAGAAGCC ATTTTAAGTT CTGATTCTGA 9868 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGGTAGAT ACATCTGAGC CGTCTACTTA CAAAGAAGCC ATTTTAAGTT CTGATTCTGA 300 AAAATGGTTT GCCGCTATGG GAGATGAGAT GGAGTCCCTA CACAAGAATC AGACATGGGA 9928 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATGGTTT GCCGCTATGG GAGATGAGAT GGAGTCCCTA CACAAGAATC AGACATGGGA 360 TCTGGTCATA CAGCCTTCGG GGAGAAAGAT TATTACTTGC AAATGGGTTT TCAAGAAGAA 9988 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGGTCATA CAGCCTTCGG GGAGAAAGAT TATTACTTGC AAATGGGTTT TCAAGAAGAA 420 GGAAGGGATA TCACCACCAG AAGGAGTCAA GTATAAAGCT AGGGTTGTTG CCAGAGGTTT 10048 |||||||||| |||||| ||| |||||||||| |||||||| |||||||||| | |||||||| GGAAGGGATA TCACCAGCAG AAGGAGTCAA GTATAAAGTC AGGGTTGTTG CTAGAGGTTT 480 CAACCAAAGA GAGGGAGTGG ACTACAATGA GATCTTCTCA CCAGTGGTCA GACATACTTC 10108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCAAAGA GAGGGAGTGG ACTACAATGA GATCTTCTCA CCAGTGGTCA GACATACTTC 540 CATCCGAGTG TTACTAGCGA TAGTTGCACA TCAGAATCTG GAGCTTGAAC AACTTGATGT 10168 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| CATCCGAGTG TTACTAGCGA TAGTTGCACA TCAGAATCTG GAGCTTGAAA CACTTGATGT 600 GAAGACAGTG TTTCTATATG GAGAGTTGGA GGAAGAGATA TACATGACT 10217 |||||||| | |||||| ||| |||||||||| |||||||||| ||||||||| GAAGACAGCG TTTCTACATG GAGAGTTGGA GGAAGAGATA TACATGACT 649 hqPGS_C01HBa0163B20.1+_SGN-E539761+ (9569 10217) ******************************************************************************** EST sequence 119 +strand 385 n (File: SGN-E284788+) 1 ACGTTAGAAA CTAGGAGTCT TGACAAACAG GTGGAGTTTC AAGTCATTCA GAACGAGAGC 61 GATTTAAAGG AACCTGAAGA GGAGGATCAA GAGCCACAGA CTGAAACTGA TATTCCAGAA 121 TCTATGCCAT CAGATATCCA TCAGAGTATA GCTCAAGATC GGTCAAGGAG GGTTGGAGTT 181 CGGCCACCTA CGAGGTATGG TTTTGAGGAC ATGGTGGGTT ATGCACTGCA GGCTGCTGAA 241 GAGGTAGATA CATCTGAGCC GTCTACTTAC AAAGAAGCCA TTTTAAGTTC TGATTCTGAA 301 AAATGGTTTG CCGATATGGG AGATGAGATG GAGTCCCTAC ACAAGAATCA GACATGGGAT 361 CTGGTCATAC AGTCTTCGGG GAGAA Predicted gene structure (within gDNA segment 8853 to 10681): Exon 1 9570 9954 ( 385 n); cDNA 1 385 ( 385 n); score: 0.979 MATCH C01HBa0163B20.1+ SGN-E284788+ 0.979 385 1.000 C PGS_C01HBa0163B20.1+_SGN-E284788+ (9570 9954) Alignment (genomic DNA sequence = upper lines): ACGTCAGAAA CTGGGAGTCT TGACAAACAG GTGGAGTTTC AAGTCATTCA GAACGAGAGA 9629 |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACGTTAGAAA CTAGGAGTCT TGACAAACAG GTGGAGTTTC AAGTCATTCA GAACGAGAGC 60 GATTTAAAGG AACCTGAAGA GGAGGATCAA GAGCCACAGA CAGAAACTGA TATTCCAGAA 9689 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GATTTAAAGG AACCTGAAGA GGAGGATCAA GAGCCACAGA CTGAAACTGA TATTCCAGAA 120 TCTATGCCAT CAGATATCCA TCAGAGTATA GCTCAAGATC GGCCAAGGAG GGTTGGAGTT 9749 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| TCTATGCCAT CAGATATCCA TCAGAGTATA GCTCAAGATC GGTCAAGGAG GGTTGGAGTT 180 CGGCCACCTA CGAGGTATGG TTTTGAGGAC ATGGTGGGTT ATGCACTGCA GGTTGCTGAA 9809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| CGGCCACCTA CGAGGTATGG TTTTGAGGAC ATGGTGGGTT ATGCACTGCA GGCTGCTGAA 240 GAGGTAGATA CATCTGAGCC GTCTACTTAC AAAGAAGCCA TTTTAAGTTC TGATTCTGAA 9869 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGTAGATA CATCTGAGCC GTCTACTTAC AAAGAAGCCA TTTTAAGTTC TGATTCTGAA 300 AAATGGTTTG CCGCTATGGG AGATGAGATG GAGTCCCTAC ACAAGAATCA GACATGGGAT 9929 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATGGTTTG CCGATATGGG AGATGAGATG GAGTCCCTAC ACAAGAATCA GACATGGGAT 360 CTGGTCATAC AGCCTTCGGG GAGAA 9954 |||||||||| || ||||||| ||||| CTGGTCATAC AGTCTTCGGG GAGAA 385 hqPGS_C01HBa0163B20.1+_SGN-E284788+ (9570 9954) ******************************************************************************** EST sequence 137 +strand 808 n (File: SGN-E343338+) 1 GTTTCCAAGT TCCAGGGAAG GAAAATCACG TCTGCAAGTT GAAGAAGTCC TTATATGGAC 61 TTAAGCAGTC TCCAAGGCAG TGGTATAAAA GGTTTGACAG CTATATGGTG AAGTTGGGCT 121 ATACTCGGAG CTCATATGAT TGTTGTGTCT ACTACAATAG GCTCAATGAT GATTCATTCA 181 TCTATCTGGT GCTTTATGTA GATGATATGT TGATAGCTGC AAAGAAGAAG TATGACATTC 241 AGAAGCTGAA GGGTTTACTT AGTGCTGAGT TTGAGATGAA GGATCTGGGA GCCGCTCGGA 301 AGATTTTAGG GATGGAGATC ATTAGAGACA GAGAGAGAAG GAAACTTTTC TTGTCACAGA 361 GAAGCTACAT TCAGAAGGTC TTGGCGAGGT TTGGCATGTC TTCATCTAAG CCCATTGATA 421 CCCCCAGTGC TGCCAATATC CATCTCACTG CCATGTTCGC TCCACAGTCA GAAGAAGAGA 481 AGGAGTATAT GTCACGAGTC CCTTATGCCA GTGCCGTAAG AAGTTTGATG TATGCTATGG 541 TCTGTACAAG GCCAGATTTA GCACATGCAG TCAGTGTAGT GAGCAGATTC ATGGGACAAC 601 CAGGGAGAGA ACATTGGCAG GCTGTGAAGA GAATTTTCCG GTACCTTAGA GGTACATCTG 661 ACGTTGGTCT CATTTATGGA GGTGATACTC AGTGCTTGGT TACTGGCTAT TCTGATTCAG 721 ACTATGCTGG AGATGTTGAC ACAAGAAGAT CGATGACTGG CTATGTGTTT ACCCTGGGAG 781 GATCTGTCGT CAGTTGGAAG GCAACTTT Predicted gene structure (within gDNA segment 9628 to 11645): Exon 1 10228 11035 ( 808 n); cDNA 1 808 ( 808 n); score: 0.990 MATCH C01HBa0163B20.1+ SGN-E343338+ 0.990 808 1.000 C PGS_C01HBa0163B20.1+_SGN-E343338+ (10228 11035) Alignment (genomic DNA sequence = upper lines): GTTTCCAAGT TCCAGGGAAG GAAAATCACG TCTGCAAGTT GAAGAAGTCC TTATATGGAC 10287 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCCAAGT TCCAGGGAAG GAAAATCACG TCTGCAAGTT GAAGAAGTCC TTATATGGAC 60 TTAAGCAGTC TCCAAGGCAG TGGTATAAAA GGTTTGACAG CTATATGGTG AAGTTGGGCT 10347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGCAGTC TCCAAGGCAG TGGTATAAAA GGTTTGACAG CTATATGGTG AAGTTGGGCT 120 ATACTCGGAG CTCATATGAT TGTTGTGTCT ACTACAATAG GCTCAATGAT GATTCATTCA 10407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACTCGGAG CTCATATGAT TGTTGTGTCT ACTACAATAG GCTCAATGAT GATTCATTCA 180 TCTATCTGGT GCTTTATGTA GATGATATGT TAATAGCTGC AAAGAAGAAG TATGACATTC 10467 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| TCTATCTGGT GCTTTATGTA GATGATATGT TGATAGCTGC AAAGAAGAAG TATGACATTC 240 AGAAGCTGAA GGGTTTACTT AGTGCTGAGT TTGAGATGAA GGATCTGGGA GCCGCTCGGA 10527 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGCTGAA GGGTTTACTT AGTGCTGAGT TTGAGATGAA GGATCTGGGA GCCGCTCGGA 300 AGATTTTAGG GATGGAGATC ATTAGAGACA GAGAGAGAAG GAAACTTTTC TTGTCACAGA 10587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTTTAGG GATGGAGATC ATTAGAGACA GAGAGAGAAG GAAACTTTTC TTGTCACAGA 360 GAAGCTACAT TCAGAAGGTC TTGGCGAGGT TTGGCATGTC TTCATCTAAG CCCATTGATA 10647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCTACAT TCAGAAGGTC TTGGCGAGGT TTGGCATGTC TTCATCTAAG CCCATTGATA 420 CCCCCAGTGC TGCCAATATC CATCTCACTG CCATGTTCGC TCCACAGTCA GGAGAAGAGA 10707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| CCCCCAGTGC TGCCAATATC CATCTCACTG CCATGTTCGC TCCACAGTCA GAAGAAGAGA 480 AGGAGTATAT GTCACGAGTC CCCTATGCCA GTGCCGTAGG AAGTTTAATG TATGCTATGG 10767 |||||||||| |||||||||| || ||||||| |||||||| | |||||| ||| |||||||||| AGGAGTATAT GTCACGAGTC CCTTATGCCA GTGCCGTAAG AAGTTTGATG TATGCTATGG 540 TCTGTACAAG GCCAGATTTA GCACATGCAG TCAGTGTAGA GAGCAGATTC ATGGGACAAC 10827 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTGTACAAG GCCAGATTTA GCACATGCAG TCAGTGTAGT GAGCAGATTC ATGGGACAAC 600 CAGGGAGAGA ACATTGGCAG GCTGTGAAGA GAATTTTCCG GTACCTTAGA GGTACATCTG 10887 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGGAGAGA ACATTGGCAG GCTGTGAAGA GAATTTTCCG GTACCTTAGA GGTACATCTG 660 ACGTTGGTCT CATTTATGGA GGTGATACTC AGTGCTTAGT TACTGGCTAT TCTGATTCAG 10947 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ACGTTGGTCT CATTTATGGA GGTGATACTC AGTGCTTGGT TACTGGCTAT TCTGATTCAG 720 ACTATGCTGG AGATGTTGAC ACAAGAAGAT CGATGACTGG CTATGTGTTT ACCCTTGGAG 11007 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ACTATGCTGG AGATGTTGAC ACAAGAAGAT CGATGACTGG CTATGTGTTT ACCCTGGGAG 780 GATCTGTCGT CAGTTGGAAG GCAACTTT 11035 |||||||||| |||||||||| |||||||| GATCTGTCGT CAGTTGGAAG GCAACTTT 808 hqPGS_C01HBa0163B20.1+_SGN-E343338+ (10228 11035) ******************************************************************************** EST sequence 183 -strand 641 n (File: SGN-E301078-) 1 ATATGTAAAT TGTAATGAAT AATAAAATGT AACAATTACA AAATTCAAAG ACATACGACA 61 ATAAATCATT CATAGAAAAC TAAATTAAGA AGTCTAACAG AGTGAAAAAA AAGACTAAAA 121 GAAACAGAAT ATTTAAGAAA AAAATACAAT ATAGACATTA TTCTTATAAG ATTGATGTAT 181 ATATAGATGA AAAAATAAGT AAAAATTAGT ACATAACTCT CTGAGTTTTT ATCGACTCCT 241 TTCATATCCT ATCAAAATTC AAGAGTTTTC AGCATCTATT TTTACTATAG AATAAAAATA 301 ATAATCTTGA TAGGGGTTTC ATGAGATAAA GAAGTTGAAT TTATACAAAT AGAATAGAAG 361 GAATACCAAA AGATATCTTA AAGTTTAATT TAAATATTTG GAGGTTATGA ATATGAAAAG 421 ATGATAGTTA TGAATATTAA GAGTGTTGTG CGAAATTTGA GATAATACGA GAAAATATAT 481 AAACGCGAAA ACCAAGACAC CAGTTTTACG TGGTTCACCA ATAAATTGGC TACGTCCACG 541 GGAAGAGAGG GAGCAATTTT ATTATGGAGA GGCAAAAACA GAATTACAGA ATAGGGTTTG 601 CCATAGCGTC TATATATAGT GCTAAGCTAC ACCCTAAAAG G Predicted gene structure (within gDNA segment 18068 to 10983): Exon 1 17433 17397 ( 37 n); cDNA 153 188 ( 36 n); score: 0.676 Intron 1 17396 17063 ( 334 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0) Exon 2 17062 17028 ( 35 n); cDNA 189 223 ( 35 n); score: 0.686 Intron 2 17027 15086 (1942 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.60) Exon 3 15085 15019 ( 67 n); cDNA 224 286 ( 63 n); score: 0.582 Intron 3 15018 14645 ( 374 n); Pd: 0.900 (s: 0.56), Pa: 0.000 (s: 0.62) Exon 4 14644 14604 ( 41 n); cDNA 287 327 ( 41 n); score: 0.622 Intron 4 14603 14542 ( 62 n); Pd: 0.482 (s: 0.62), Pa: 0.582 (s: 0.54) Exon 5 14541 14493 ( 49 n); cDNA 328 376 ( 49 n); score: 0.531 Intron 5 14492 13484 (1009 n); Pd: 0.388 (s: 0.54), Pa: 0.620 (s: 0) Exon 6 13483 13476 ( 8 n); cDNA 377 384 ( 8 n); score: 0.625 Intron 6 13475 13379 ( 97 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 7 13378 13335 ( 44 n); cDNA 385 425 ( 41 n); score: 0.727 Intron 7 13334 11898 (1437 n); Pd: 0.000 (s: 0.73), Pa: 0.000 (s: 0.77) Exon 8 11897 11682 ( 216 n); cDNA 426 641 ( 216 n); score: 0.903 MATCH C01HBa0163B20.1- SGN-E301078- 0.827 497 0.775 C PGS_C01HBa0163B20.1-_SGN-E301078- (17433 17397,17062 17028,15085 15019,14644 14604,14541 14493,13483 13476,13378 13335,11897 11682) Alignment (genomic DNA sequence = upper lines): AGACTCTAAT TTTTTATCCT TGTTGGTTTA TATACATATA TCATTTTTAT GTAGTGTACA 17374 |||| || | || || | || | || || |||| || AGACATTATT CTTATAAGAT TGAT-GTATA TATAGAT... .......... .......... 188 TAAAATTCTG AGGATGAAAA GTATGTCAAA CAAATTAAAA GATTGGCCTA TTTGCTCAGG 17314 .......... .......... .......... .......... .......... .......... 188 CAATCACTTT TATTGTCTAG GTGAAAAATG AAAATAATAC AATTGTAAAC AAATTATTAT 17254 .......... .......... .......... .......... .......... .......... 188 CAAAAGTGGT GATAACAGAG AGCTAAAACT TTATAATCAG AATGTTGTTT GTTAGTTTGT 17194 .......... .......... .......... .......... .......... .......... 188 GTTTAATCAT ATGTGATTAA AATGAATTAG AGTGTATTTG GTTTGGGTCA AAAATTGATC 17134 .......... .......... .......... .......... .......... .......... 188 AAAATCTATT TTCAAGTCAG TTTTTAACTT CTGAAATTAT TTGGAAAATA TAAAAAATAT 17074 .......... .......... .......... .......... .......... .......... 188 TTTAAAATAA GTTAAAAATA ACTTAAAATA AGTTGAAAAG TGTTTGGTAA GATAAAAATG 17014 ||||||| | | ||||| ||| | || | | || .......... .GAAAAAATA AGTAAAAATT AGTACATAAC TCTCTG.... .......... 223 ACTTAAAATA AGTTTAAAAT AACTTAAAAC AAGTCAAAAA CCAAAAGTAG GTCTCCTCCT 16954 .......... .......... .......... .......... .......... .......... 223 ACTTTTTATT TTTTCATGGG ATAATACTCA ATTACCCCCT AGCCTATACA CAAAATTCCT 16894 .......... .......... .......... .......... .......... .......... 223 ACGACACACC TTATCTTTGA TGAGGTCCTA TTACCCCCTC CAACTTTTTT TTAAGTAATT 16834 .......... .......... .......... .......... .......... .......... 223 TATTACTCCT TTGCGTGCCT ACGTGGCAAT AATCGTGATT TCACCCATGT AGGGTGCGTG 16774 .......... .......... .......... .......... .......... .......... 223 AGTGCAGATT TTGGCTAACA ATGATCAATA AAAGTTAGCC ACGTGTCAAA GCAATTTGAA 16714 .......... .......... .......... .......... .......... .......... 223 AAAAAATTCA AAAATAAATT TTATTGTTTC TCTCAAAAGC ATTTCTTCTT CCTCTTTTGA 16654 .......... .......... .......... .......... .......... .......... 223 AAAAATAACT CCATTTTCAT GGTTTTTCAT CTTTGAAGAA GCTCCATCTA TTATCATTCA 16594 .......... .......... .......... .......... .......... .......... 223 AGTTAAATAG CTCCTTGATT TGAAAAGGTA AAGTAAAATT TAATATATTC TTTACATCTT 16534 .......... .......... .......... .......... .......... .......... 223 TTTATGTCGA TTATTAATTC TTATTTTTTT GACAATGTTT ATAAAGTTAG GGTTATGACA 16474 .......... .......... .......... .......... .......... .......... 223 AAATCCGAGT TGAATAAGTT GTGTATGGAT GAGAACGATT CAATGTTTAA CGCGGAAGTG 16414 .......... .......... .......... .......... .......... .......... 223 CGATGCAAGC ATAGAATCTT ACTGCAAATG CAGACGTCTT GGTCAAATCG CAATCCCGGA 16354 .......... .......... .......... .......... .......... .......... 223 AGACGATTTT GGTCTTGTCC TCACTATGAG GCCACAAACT GTAATTTCTT TAGATGGAGA 16294 .......... .......... .......... .......... .......... .......... 223 GACACGTAGA GAGTCGATGA AAGATCTCGT TTTATTATTC CTAAATTGGT GAATATGATT 16234 .......... .......... .......... .......... .......... .......... 223 AACGAGTTAG AAAAAAATTA TGAGTGTGTG AAGATGCAAC TGGAACAACT TGATAATTCC 16174 .......... .......... .......... .......... .......... .......... 223 AACATTGAAC AGTCAAAGTT AAAGGACTAA AAAAATTATG AGCTTGTGAA GATGCAACTG 16114 .......... .......... .......... .......... .......... .......... 223 GAACAGCTTG ATAATTCAGA CATTGAACAG TTAAAGTTAA AGGACTAAAA ACAACTAAGA 16054 .......... .......... .......... .......... .......... .......... 223 GACACAAATA ACATAGATAA AATATGGCCA AAAAGATTTT TTCTTTTATT TTAGGGTAAT 15994 .......... .......... .......... .......... .......... .......... 223 GCTAATTGCT AAACGGCTAG AAATTTGGCC AGAAATTTTA AAAATCTATA ATTTTTTTTA 15934 .......... .......... .......... .......... .......... .......... 223 TTTTAAAATA AATTATTATT TTCTTCTTCT TATTTTAATT AAAAAGTAAA AGCTAAAAGG 15874 .......... .......... .......... .......... .......... .......... 223 ATAAAATATT TAAAGATAAA ATTAAGTTAA TGGCGTGCGT GACTGTTGTC TAGAATCTCG 15814 .......... .......... .......... .......... .......... .......... 223 AGGTCTAAGC TCTTTATTAA CTATAAAAAC TGAAAAAAAG TAAAGCAGAC TTTTCCTCCC 15754 .......... .......... .......... .......... .......... .......... 223 AAGAGAACAG TCAAAGATCC AAATATATCC TTTTGTCCTG TTGTTTTGAC CCATTTTCTT 15694 .......... .......... .......... .......... .......... .......... 223 ATGGAGCCTA AGTATGATTT TTTGGTTGAT ATTTTTTTGG TCGATTTTTA TTTGTTATAT 15634 .......... .......... .......... .......... .......... .......... 223 TATGTTTTTT AGAAAATTAG TTTGACTAAT TTTTAGAGTT AAATTAAATT ATATCAATTC 15574 .......... .......... .......... .......... .......... .......... 223 AATATGTTAA ATTAAAAAAT ATATATATTC AAAAAGTATA TGAAAAGTAT TATAAATTAC 15514 .......... .......... .......... .......... .......... .......... 223 AATGTTTTAC ATATTAATAT GACGAAAAAT ATATCTAAAA ATATTAATAA AAGATTTTAT 15454 .......... .......... .......... .......... .......... .......... 223 AATTTGATTT TAAAAATAGA AATCATAACA AATAATAATA GACGGACGGA GTAGTTATGT 15394 .......... .......... .......... .......... .......... .......... 223 TGCATGTTAG GGATAGAGGG AGTAATTGAC TTACTTGCTA GCATTCGTGT CTTAGAAATC 15334 .......... .......... .......... .......... .......... .......... 223 TACAAGAATA CAGCCATCTT TGTTCGAAAT TTTGTTGTAC TATTTGTATT TGCTTGAGAG 15274 .......... .......... .......... .......... .......... .......... 223 ATTACATTGT CTAATAAGCG AGTTGGATAA AATTTGAATG GATAATGATG TTAATAAATA 15214 .......... .......... .......... .......... .......... .......... 223 CCCATTCGAA AGATATATGG GCTAAAACAA AATTAAAATG TAAGTTATGA TTTAACCTTC 15154 .......... .......... .......... .......... .......... .......... 223 GATTCTTATT AAGTTTGAAT ATCTAATAAA AAATATTTTT TCAATTATAA TTTTATACTC 15094 .......... .......... .......... .......... .......... .......... 223 TCTCGACTAC TATTTATATG ATTCATTTCA GATTTTGATA TTCAATCAAA TTTATGTTTG 15034 | | ||||| | | || ||||| || | || | |||| | | || ........AG TTTTTAT-CG ACTCCTTTCA TATCCT-ATC AAAATTCAAG AGT-T-TTCA 271 ACCTAAATTT TTTATATATC TTTTAAATAA TTTGAGTTAT CAATTACTCT GACTTACAGT 14974 | | |||| || | GCATCTATTT TTACT..... .......... .......... .......... .......... 286 ACTCTATTCA TTTAAATTTT TTTTTGTCTA ATTTGACTTG AAAAGAAATT TAAGAAATGA 14914 .......... .......... .......... .......... .......... .......... 286 ACGAAAACTT TTTAATTCTT TGATACTAAA CATGTCCCTT GAAATGTTGA AGTTAGAGCG 14854 .......... .......... .......... .......... .......... .......... 286 TTGTAAAGAA AAGGTTATTT TTATTTAATC AGGCTAAAAA GAAAATTATA TTATTCTTTT 14794 .......... .......... .......... .......... .......... .......... 286 TGAAATGGAT GAAATACTTG TTATATAGTT AACAAATATA GAAATTTAAT TTCAAGAAAT 14734 .......... .......... .......... .......... .......... .......... 286 TTAAAAAATT TCATTCGCAA ATTTTTAAAT TTTTAACAAA CTTAAATTAT TCAACTCATA 14674 .......... .......... .......... .......... .......... .......... 286 AAAACAAAAT GTGTCACGTA AATATAAATA TAAAAGTGAA AAAACAAAAC TTGA-AAGGT 14615 | || || | || || | || | |||| | || .......... .......... .........A TAGAA-TAAA AATAATAATC TTGATAGGGG 316 TATACTCAGA TGCTAGTACC TTGTCGAATA CGTGAAATAA TTTAATTGCA TTGAATATGA 14555 | | | ||| | TTTCATGAGA T......... .......... .......... .......... .......... 327 ACAAAACTTG TAGCATTGGG AGCTGTA-CA ATAAAAATAT CATAAAAGAG TTATCAAAA- 14497 | | || || | ||| ||||| ||| ||| || ||||| .......... ...-A-AAGA AGTTGAATTT ATACAAATAG AATAGAAGGA ATACCAAAAG 372 ATAGGTAACA AGCATTCATT AGGGTTTGCA AATAAAAATA CCATTCCCTA ATATTCATCC 14437 ||| ATAT...... .......... .......... .......... .......... .......... 376 ACCATTTTCC CTTAGAAAAT GTCAAACAAA TCCCCCATTT TTCCTATTGT TGAACCTCAA 14377 .......... .......... .......... .......... .......... .......... 376 CACTTCAGTG ACTATGGCTT CGACCCTCAA ATCCATTATT TTCAGGTATA TATTACATTG 14317 .......... .......... .......... .......... .......... .......... 376 TTATTACCTA AATTAAAATT ATATTATAGT AAGTGTTGAA CCTCTTATTC GTATTTTTTC 14257 .......... .......... .......... .......... .......... .......... 376 GTATGATTTG CTCATTCATA TTTTAAATTT CTTAATAAAA ATTGGTTCAT CAATGCAATT 14197 .......... .......... .......... .......... .......... .......... 376 TTTGCTCTCC CCTGTTTTAA TAGATTTTGG AAGAAGCAAG AAAACACAAA ATCAGAGAAA 14137 .......... .......... .......... .......... .......... .......... 376 CTGCGAGGTC ATCCATAGAT ACACTTCACT TCAAGCTACA GAAACCCATT TCAAAAGATG 14077 .......... .......... .......... .......... .......... .......... 376 AATCATCGAA GAAGATAAAA AAGAACAGTA GCCGTAAAAG ATGGTGGAAA AATGCTCTGC 14017 .......... .......... .......... .......... .......... .......... 376 TTTTCTTCAA AAAGACCAAA TCCAACAATG AAAAATTCTA CGGCGCCGAC GGTGAAGTTC 13957 .......... .......... .......... .......... .......... .......... 376 ATCACCGGCG ACCTAATTTT CAAGGATCGA TTTCTGGGCC GGTATACATT ACTGAGAGCA 13897 .......... .......... .......... .......... .......... .......... 376 GAAGTGGGTC GAACACGCCT TACCGTACAA CAAGCCGGCC GTCCTCCGGT CCACTCGCCG 13837 .......... .......... .......... .......... .......... .......... 376 GAACTTTAAC TCCTAACCGG AAAGGTGATT TGGAGATCCC CTACATTAAC CTCAGGGAGT 13777 .......... .......... .......... .......... .......... .......... 376 TTAACATGGA CCAGCAGCAG CAGCATAAGA TCTGTACAGC CTCGCCTATG CCAATATATT 13717 .......... .......... .......... .......... .......... .......... 376 TGGTCACGTG AACAGAGCAG TATTTAATTA ATTAAATTGA TAATTTTAAG TGTTACTGCT 13657 .......... .......... .......... .......... .......... .......... 376 AATTAATTAC TCTTATTATC CTAATTTAGA CCTTTTTAGG GTTTCAAATT ACTTGAAAGT 13597 .......... .......... .......... .......... .......... .......... 376 TGATGACCCA TGGGTATCCT CTTTTAGTTC TTTGAATTAT GTGCAACTTT CTTTTATGTA 13537 .......... .......... .......... .......... .......... .......... 376 AAAGTGCTTT AATATTGATG GCATGTAACA ACTTTTTTCT TGTAAATTGT CAGCAGACAG 13477 | | || .......... .......... .......... .......... .......... ...CTTAAAG 383 TATGGATTTT CTTGCAGCCT ATTGTAATGA ACTGCTACAA ACATGCCTTT TTGCTTTGAC 13417 | T......... .......... .......... .......... .......... .......... 384 CATGTTACTC ACTTTTGATA GCGGAGCCAA ATTTTTTATT GATTTGATAT ATTTAGAAGC 13357 || |||| | || |||| | || .......... .......... .......... ........TT AATTT-AAAT ATTT-GGAGG 404 TTGTTGAATA TGATATCACG ATATGAAATT ATAATATGGT ATTATGATAT AGAAATTGAA 13297 || |||||| ||| | | | || TT-ATGAATA TGAAAAGATG AT........ .......... .......... .......... 425 GTTTCGTTTG GACATGCGAT ATGAAATTTT AGTGTTGTAT ATTTTTTCAT AAACATAAAA 13237 .......... .......... .......... .......... .......... .......... 425 ATCTCATAAA TTCTAAAAAT ATTATAAAAT AAACAAAGAA TCATAAAATC GTATAATAAA 13177 .......... .......... .......... .......... .......... .......... 425 TTATTATAAA GTTATTTGTT TTTAACTTAA GTAATTGTTT CATCAGTATA TTTGAGTAAA 13117 .......... .......... .......... .......... .......... .......... 425 AATGAAATAC CTTTCACCGA CTTTTCAAGA TTTTATTATC AACAATCGTG AAGTGTGAGT 13057 .......... .......... .......... .......... .......... .......... 425 TAAAGTGATT ATATATTGGT GAGAATAATA AATTATAAAA ATTAATAATG TGATTATAAA 12997 .......... .......... .......... .......... .......... .......... 425 TTTATTTATA TGTAAAACAA ATTGTTAGTA AATATAAATG TGGATATTTT TAACAAAATG 12937 .......... .......... .......... .......... .......... .......... 425 TAAACTTGTG AGTCAATTTT TGTATTAAAA TAACTCAAAT AATGACATGA TATTCAATAT 12877 .......... .......... .......... .......... .......... .......... 425 GATTCCAAAT TATGGTTTTT GAAGGATATG ATATCATATC ATGAGATGGA ATCAGTGTAA 12817 .......... .......... .......... .......... .......... .......... 425 AATCGCACAT CCAAACGCTA ATTCCATTTC ACGATACCAT ATCGTGATAT AATATCACAT 12757 .......... .......... .......... .......... .......... .......... 425 AATCAAATGC CTATTTAATC TAAATTAAAT AAGATAATGA GGCATTATTT GTAGTGCTCA 12697 .......... .......... .......... .......... .......... .......... 425 AACAAAAAAC TACATGTTAG AGAATGAATT AGTAAACAAA ATTTCAGATT AGCTAAATAG 12637 .......... .......... .......... .......... .......... .......... 425 TTGTACAAGT GATGGACCAC ATGTATATGA ATTGATGCCC AATTTTTAGG GGAAGCCTCG 12577 .......... .......... .......... .......... .......... .......... 425 ATGTTTGTCT TGATATAAAC TATTATTAGT GACCGTTTGG TTGTGGGGTC TCACTCGCTT 12517 .......... .......... .......... .......... .......... .......... 425 GTGGATATTT ATGACTTACA TCATTATCTC ATTTGTGTTT ATTTTCACTG TAGCAAAAGC 12457 .......... .......... .......... .......... .......... .......... 425 AGTGGAGTAA ACATTGAGGG AGTTGGCAAG GCAAACTGCA TGTGATTCTC AGGCCCTCCA 12397 .......... .......... .......... .......... .......... .......... 425 AAAAAAAAAA ACATTAGAGG GGTATATGGT CGGGTTAGAT TGGATCTTTT AAATATTAAA 12337 .......... .......... .......... .......... .......... .......... 425 TTAAATTAAA TTATTTTTGT TAGATTTTAA ATTTATAGGT CAAATCAAAT CAATATAATT 12277 .......... .......... .......... .......... .......... .......... 425 AGGGTTTTCA ATCTAGAGTT TTTTTTAATT TAATTTTTTT TTAATAAAGT ATGCATATAC 12217 .......... .......... .......... .......... .......... .......... 425 ACATATAATT TACTTGTGCT TTAAATTTTT CTTTAGTCCT ATTAAAATAA AACTATCTAA 12157 .......... .......... .......... .......... .......... .......... 425 GGTGTTTCTT AAGAAATAAC ACAAAATATG ATATGATTAA TGACACACTA GAATATTTCA 12097 .......... .......... .......... .......... .......... .......... 425 AATAATAATA ATAATAATAA TGAAATCGCG TAAAAAAATA TTACAAATTA ACAAATCATA 12037 .......... .......... .......... .......... .......... .......... 425 ATGAAAATAA TTATAATTTA AAAGTACTAA ATCATGCTAA AATAAGTTTA ATAAATATTA 11977 .......... .......... .......... .......... .......... .......... 425 CTTACTTGGC TAAATATTAA AGGAAATTAA AATTAGATTA TGTATTTTAA TTGTCTAAAT 11917 .......... .......... .......... .......... .......... .......... 425 CAATGTAAAA TCAAAGAAGA AATATTTAAT ATTATTGTCT GTTGTGCGGA ATTTGAGATA 11857 | || | ||| |||| | | |||||||| | |||||||||| .......... .........A GTTA-TGAAT ATTA-AGAGT GTTGTGCGAA ATTTGAGATA 464 ATACGAGA-A A-ATATAAAC GCGAAAAACA AGACAACAGA TTTACGTGGT TCACCAATAA 11799 |||||||| | | |||||||| ||||||| || ||||| ||| |||||||||| |||||||||| ATACGAGAAA ATATATAAAC GCGAAAACCA AGACACCAGT TTTACGTGGT TCACCAATAA 524 ATTGGCTACG TCCACGGGAA GAGAGGGAGC AGTTTTATTA TGGAGAGGCA AAAACAGAAT 11739 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| ATTGGCTACG TCCACGGGAA GAGAGGGAGC AATTTTATTA TGGAGAGGCA AAAACAGAAT 584 TACAGAATAG GGTTTCCCAT AGCGTCTATA TATAGTGCTA AGCTACGCCC TAACAGG 11682 |||||||||| ||||| |||| |||||||||| |||||||||| |||||| ||| ||| ||| TACAGAATAG GGTTTGCCAT AGCGTCTATA TATAGTGCTA AGCTACACCC TAAAAGG 641 hqPGS_C01HBa0163B20.1-_SGN-E301078- (13378 13335,11897 11682) ******************************************************************************** EST sequence 186 -strand 575 n (File: SGN-E301194-) 1 CATTCATAGA AAACTAAATT AAGAAGTCTA ACAGAGTGAA AAAAAAGACT AAAAGAAACA 61 GAATATTTAA GAAAAAAATA CAATATAGAC ATTATTCTTA TAAGATTGAT GTATATATAG 121 ATGAAAAAAT AAGTAAAAAT TAGTACATAA CTCTCTGAGT TTTTATCGAC TCCTTTCATA 181 TCCTATCAAA ATTCAAGAGT TTTCAGCATC TATTTTTACT ATAGAATAAA AATAATAATC 241 TTGATAGGGG TTTCATGAGA TAAAGAAGTT GAATTTATAC AAATAGAATA GAAGGAATAC 301 CAAAAGATTT CTTAAAGTTT AATTTAAATA TTTGGAGGTT ATGAATATGA AAAGATGATA 361 GTTATGAATA TTAAGAGTGT TGTGCGAAAT TTGAGATAAT ACGAGAAAAT ATATAAACGC 421 GAAAAACAAG ACAACAGATT TACGTGGTTC ACCAATAAAT TGGCTACGTC CACGGGAAGA 481 GAGGGAGCAA TTTTATTATG GAGAGGCAAA AACAGAATTA CAGAATAGGG TTTGCCATAG 541 CGTCTATATA TAGTGCTAAG CTACGCCCTA AAAGG Predicted gene structure (within gDNA segment 14278 to 6577): Exon 1 13378 13335 ( 44 n); cDNA 319 359 ( 41 n); score: 0.727 Intron 1 13334 11898 (1437 n); Pd: 0.000 (s: 0.73), Pa: 0.000 (s: 0.77) Exon 2 11897 11682 ( 216 n); cDNA 360 575 ( 216 n); score: 0.921 MATCH C01HBa0163B20.1- SGN-E301194- 0.921 260 0.452 C PGS_C01HBa0163B20.1-_SGN-E301194- (13378 13335,11897 11682) Alignment (genomic DNA sequence = upper lines): TTGATTTGAT ATATTTAGAA GCTTGTTGAA TATGATATCA CGATATGAAA TTATAATATG 13319 || |||| | |||||| || | || |||| ||||| | | ||| TTAATTT-AA ATATTTGGAG G-TT-ATGAA TATGAAAAGA TGAT...... .......... 359 GTATTATGAT ATAGAAATTG AAGTTTCGTT TGGACATGCG ATATGAAATT TTAGTGTTGT 13259 .......... .......... .......... .......... .......... .......... 359 ATATTTTTTC ATAAACATAA AAATCTCATA AATTCTAAAA ATATTATAAA ATAAACAAAG 13199 .......... .......... .......... .......... .......... .......... 359 AATCATAAAA TCGTATAATA AATTATTATA AAGTTATTTG TTTTTAACTT AAGTAATTGT 13139 .......... .......... .......... .......... .......... .......... 359 TTCATCAGTA TATTTGAGTA AAAATGAAAT ACCTTTCACC GACTTTTCAA GATTTTATTA 13079 .......... .......... .......... .......... .......... .......... 359 TCAACAATCG TGAAGTGTGA GTTAAAGTGA TTATATATTG GTGAGAATAA TAAATTATAA 13019 .......... .......... .......... .......... .......... .......... 359 AAATTAATAA TGTGATTATA AATTTATTTA TATGTAAAAC AAATTGTTAG TAAATATAAA 12959 .......... .......... .......... .......... .......... .......... 359 TGTGGATATT TTTAACAAAA TGTAAACTTG TGAGTCAATT TTTGTATTAA AATAACTCAA 12899 .......... .......... .......... .......... .......... .......... 359 ATAATGACAT GATATTCAAT ATGATTCCAA ATTATGGTTT TTGAAGGATA TGATATCATA 12839 .......... .......... .......... .......... .......... .......... 359 TCATGAGATG GAATCAGTGT AAAATCGCAC ATCCAAACGC TAATTCCATT TCACGATACC 12779 .......... .......... .......... .......... .......... .......... 359 ATATCGTGAT ATAATATCAC ATAATCAAAT GCCTATTTAA TCTAAATTAA ATAAGATAAT 12719 .......... .......... .......... .......... .......... .......... 359 GAGGCATTAT TTGTAGTGCT CAAACAAAAA ACTACATGTT AGAGAATGAA TTAGTAAACA 12659 .......... .......... .......... .......... .......... .......... 359 AAATTTCAGA TTAGCTAAAT AGTTGTACAA GTGATGGACC ACATGTATAT GAATTGATGC 12599 .......... .......... .......... .......... .......... .......... 359 CCAATTTTTA GGGGAAGCCT CGATGTTTGT CTTGATATAA ACTATTATTA GTGACCGTTT 12539 .......... .......... .......... .......... .......... .......... 359 GGTTGTGGGG TCTCACTCGC TTGTGGATAT TTATGACTTA CATCATTATC TCATTTGTGT 12479 .......... .......... .......... .......... .......... .......... 359 TTATTTTCAC TGTAGCAAAA GCAGTGGAGT AAACATTGAG GGAGTTGGCA AGGCAAACTG 12419 .......... .......... .......... .......... .......... .......... 359 CATGTGATTC TCAGGCCCTC CAAAAAAAAA AAACATTAGA GGGGTATATG GTCGGGTTAG 12359 .......... .......... .......... .......... .......... .......... 359 ATTGGATCTT TTAAATATTA AATTAAATTA AATTATTTTT GTTAGATTTT AAATTTATAG 12299 .......... .......... .......... .......... .......... .......... 359 GTCAAATCAA ATCAATATAA TTAGGGTTTT CAATCTAGAG TTTTTTTTAA TTTAATTTTT 12239 .......... .......... .......... .......... .......... .......... 359 TTTTAATAAA GTATGCATAT ACACATATAA TTTACTTGTG CTTTAAATTT TTCTTTAGTC 12179 .......... .......... .......... .......... .......... .......... 359 CTATTAAAAT AAAACTATCT AAGGTGTTTC TTAAGAAATA ACACAAAATA TGATATGATT 12119 .......... .......... .......... .......... .......... .......... 359 AATGACACAC TAGAATATTT CAAATAATAA TAATAATAAT AATGAAATCG CGTAAAAAAA 12059 .......... .......... .......... .......... .......... .......... 359 TATTACAAAT TAACAAATCA TAATGAAAAT AATTATAATT TAAAAGTACT AAATCATGCT 11999 .......... .......... .......... .......... .......... .......... 359 AAAATAAGTT TAATAAATAT TACTTACTTG GCTAAATATT AAAGGAAATT AAAATTAGAT 11939 .......... .......... .......... .......... .......... .......... 359 TATGTATTTT AATTGTCTAA ATCAATGTAA AATCAAAGAA GAAATATTTA ATATTATTGT 11879 | || | | |||||| | .......... .......... .......... .......... .AGTTA-TGA ATATTA-AGA 376 CTGTTGTGCG GAATTTGAGA TAATACGAG- AAA-ATATAA ACGCGAAAAA CAAGACAACA 11821 ||||||||| ||||||||| ||||||||| ||| |||||| |||||||||| |||||||||| GTGTTGTGCG AAATTTGAGA TAATACGAGA AAATATATAA ACGCGAAAAA CAAGACAACA 436 GATTTACGTG GTTCACCAAT AAATTGGCTA CGTCCACGGG AAGAGAGGGA GCAGTTTTAT 11761 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GATTTACGTG GTTCACCAAT AAATTGGCTA CGTCCACGGG AAGAGAGGGA GCAATTTTAT 496 TATGGAGAGG CAAAAACAGA ATTACAGAAT AGGGTTTCCC ATAGCGTCTA TATATAGTGC 11701 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TATGGAGAGG CAAAAACAGA ATTACAGAAT AGGGTTTGCC ATAGCGTCTA TATATAGTGC 556 TAAGCTACGC CCTAACAGG 11682 |||||||||| ||||| ||| TAAGCTACGC CCTAAAAGG 575 hqPGS_C01HBa0163B20.1-_SGN-E301194- (13378 13335,11897 11682) ******************************************************************************** EST sequence 179 -strand 416 n (File: SGN-E219208-) 1 AATGGTGTTC TTTGCGCGTT TGGTGGGACG TTTTGATGTG GCTGATGAAG TTACCCCAGT 61 CAACATTGAT AATTTTGAGT GAGGTATACA ACCCCCCGGA TGCTCTTTGC CATAATAGGT 121 TGTTCAATAC CTGTTTGCCG TAACTAGGAA AATTTTGATG ATGGAGAGAG AAGAACCAAG 181 ATGATCTAAT TTTCCGGGGT GGTAAATCGG CAATGATCAG AATTTAAAAG TACTAAATCA 241 TTCTAAAATA AGTTTAATAA GCATTAGAAG GAAATTAAAA TTAAATTATG TATTTCCCTT 301 GTCTAAATCA ATGTAAAATC AAAGAACAAA TATTTAATAT TATTGTCATT CTTAATGTTA 361 TATTGATTTC CCTTTTGCCT TAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAA Predicted gene structure (within gDNA segment 14832 to 10588): Exon 1 12462 12456 ( 7 n); cDNA 226 232 ( 7 n); score: 0.857 Intron 1 12455 11991 ( 465 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.60) Exon 2 11990 11878 ( 113 n); cDNA 233 347 ( 115 n); score: 0.788 PPA cDNA 382 416 MATCH C01HBa0163B20.1- SGN-E219208- 0.788 120 0.288 C PGS_C01HBa0163B20.1-_SGN-E219208- (12462 12456,11990 11878) Alignment (genomic DNA sequence = upper lines): AAAAGCAGTG GAGTAAACAT TGAGGGAGTT GGCAAGGCAA ACTGCATGTG ATTCTCAGGC 12403 ||||| | AAAAGTA... .......... .......... .......... .......... .......... 232 CCTCCAAAAA AAAAAAACAT TAGAGGGGTA TATGGTCGGG TTAGATTGGA TCTTTTAAAT 12343 .......... .......... .......... .......... .......... .......... 232 ATTAAATTAA ATTAAATTAT TTTTGTTAGA TTTTAAATTT ATAGGTCAAA TCAAATCAAT 12283 .......... .......... .......... .......... .......... .......... 232 ATAATTAGGG TTTTCAATCT AGAGTTTTTT TTAATTTAAT TTTTTTTTAA TAAAGTATGC 12223 .......... .......... .......... .......... .......... .......... 232 ATATACACAT ATAATTTACT TGTGCTTTAA ATTTTTCTTT AGTCCTATTA AAATAAAACT 12163 .......... .......... .......... .......... .......... .......... 232 ATCTAAGGTG TTTCTTAAGA AATAACACAA AATATGATAT GATTAATGAC ACACTAGAAT 12103 .......... .......... .......... .......... .......... .......... 232 ATTTCAAATA ATAATAATAA TAATAATGAA ATCGCGTAAA AAAATATTAC AAATTAACAA 12043 .......... .......... .......... .......... .......... .......... 232 ATCATAATGA AAATAATTAT AATTTAAAAG TACTAAATCA TGCTAAAATA AGTTTAATAA 11983 | ||| | .......... .......... .......... .......... .......... ..CTAAATCA 240 ATAT-TACTT ACTTGGCTAA ATATTA-AAG GAAATTAAAA TTAGATTATG TATTTTAATT 11925 | | | | | || ||| |||| ||| |||||||||| ||| |||||| ||||| || TTCTAAAATA AGTTTAATAA GCATTAGAAG GAAATTAAAA TTAAATTATG TATTTCCCTT 300 GTCTAAATCA ATGTAAAATC AAAGAAGAAA TATTTAATAT TATTGTC 11878 |||||||||| |||||||||| |||||| ||| |||||||||| ||||||| GTCTAAATCA ATGTAAAATC AAAGAACAAA TATTTAATAT TATTGTC 347 hqPGS_C01HBa0163B20.1-_SGN-E219208- (11990 11878) ******************************************************************************** EST sequence 180 -strand 407 n (File: SGN-E219032-) 1 TCTTTGCGCG TTTGGTGGGA CGTTTTGATG TGGCTGATGA AGTTACCCCA GTCAACATTG 61 ATAATTTTGA GTGAGGTATA CAACCCCCGG ATGCTCTTTG CCATAATAGG TTGTTCAATA 121 CCTGTTTGCC GTAACTAGGA AAATTTTGAT GATGGAGAGA GAAGAACCAA GATGATCTAA 181 TTTTCCGGGG TGGTAAATCG GCAATGATCA GAATTTAAAA GTACTAAATC ATTCTAAAAT 241 AAGTTTAATA AGCATTAGAA GGAAATTAAA ATTAAATTAT GTATTTCCCT TGTCTAAATC 301 AATGTAAAAT CAAAGAACAA ATATTTAATA TTATTGTCAT TCTTAATGTT ATATTAATTT 361 CCCCTTTGCC TTAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 14742 to 10588): Exon 1 12462 12456 ( 7 n); cDNA 217 223 ( 7 n); score: 0.857 Intron 1 12455 11991 ( 465 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.60) Exon 2 11990 11878 ( 113 n); cDNA 224 338 ( 115 n); score: 0.788 PPA cDNA 373 407 MATCH C01HBa0163B20.1- SGN-E219032- 0.788 120 0.295 C PGS_C01HBa0163B20.1-_SGN-E219032- (12462 12456,11990 11878) Alignment (genomic DNA sequence = upper lines): AAAAGCAGTG GAGTAAACAT TGAGGGAGTT GGCAAGGCAA ACTGCATGTG ATTCTCAGGC 12403 ||||| | AAAAGTA... .......... .......... .......... .......... .......... 223 CCTCCAAAAA AAAAAAACAT TAGAGGGGTA TATGGTCGGG TTAGATTGGA TCTTTTAAAT 12343 .......... .......... .......... .......... .......... .......... 223 ATTAAATTAA ATTAAATTAT TTTTGTTAGA TTTTAAATTT ATAGGTCAAA TCAAATCAAT 12283 .......... .......... .......... .......... .......... .......... 223 ATAATTAGGG TTTTCAATCT AGAGTTTTTT TTAATTTAAT TTTTTTTTAA TAAAGTATGC 12223 .......... .......... .......... .......... .......... .......... 223 ATATACACAT ATAATTTACT TGTGCTTTAA ATTTTTCTTT AGTCCTATTA AAATAAAACT 12163 .......... .......... .......... .......... .......... .......... 223 ATCTAAGGTG TTTCTTAAGA AATAACACAA AATATGATAT GATTAATGAC ACACTAGAAT 12103 .......... .......... .......... .......... .......... .......... 223 ATTTCAAATA ATAATAATAA TAATAATGAA ATCGCGTAAA AAAATATTAC AAATTAACAA 12043 .......... .......... .......... .......... .......... .......... 223 ATCATAATGA AAATAATTAT AATTTAAAAG TACTAAATCA TGCTAAAATA AGTTTAATAA 11983 | ||| | .......... .......... .......... .......... .......... ..CTAAATCA 231 ATAT-TACTT ACTTGGCTAA ATATTA-AAG GAAATTAAAA TTAGATTATG TATTTTAATT 11925 | | | | | || ||| |||| ||| |||||||||| ||| |||||| ||||| || TTCTAAAATA AGTTTAATAA GCATTAGAAG GAAATTAAAA TTAAATTATG TATTTCCCTT 291 GTCTAAATCA ATGTAAAATC AAAGAAGAAA TATTTAATAT TATTGTC 11878 |||||||||| |||||||||| |||||| ||| |||||||||| ||||||| GTCTAAATCA ATGTAAAATC AAAGAACAAA TATTTAATAT TATTGTC 338 hqPGS_C01HBa0163B20.1-_SGN-E219032- (11990 11878) ******************************************************************************** EST sequence 47 -strand 758 n (File: SGN-E548589-) 1 GACCCTCAAA TCCATTATTT TCAGATTTTG GAAGAAGCAA GAAAACACAA AATCAGAGAA 61 ACTGCGAGGT CATCCATAGA TACACTTCAC TTCAAGCTAC AGAAACCCAT TTCAAAAGAT 121 GAATCATCGA AGAAGATAAA AAAGAACAGT AGCCGTAAAA GATGGTGGAA AAATGCTCTG 181 CTTTTCTTCA AAAAGACCAA ATCCAACAAT GAAAAATTCT ACGGCGCCGA CGGTGAAGTT 241 CATCACCGGC GACCTAATTT TCAAGGATCG ATTTCTGGGC CGGTATACAT TACTGAGAGC 301 AGAAGTGGGT CGAACACGCC TTACCGTACA ACAAGCCGGC CGTCCTCCGG TCCACTCGCC 361 GGAACTTTAA CTCCTAACCG GAAAGGTGAT TTGGAGATCC CCTACATTAA CCTCAGGGAG 421 TTTAACATGG ACCAGCAGCA GCAGCATAAG ATCTGTACAG CCTCGCCTAT GCCAATATAT 481 TTGGTCACGT GAACAGAGCA GTATTTAATT AATTAAATTG ATAATTTTAA GTGTTACTGC 541 TAATTAATTA CTCTTATTAT CCTAATTTAG ACCTTTTTAG GGTTTCAAAT TACTTGAAAG 601 TTGATGACCC ATGGGTATCC TCTTTTAGTT CTTTGAATTA TGTGCAACTT TCTTTTATGT 661 AAAAGTGCTT TAATATTGAT GGCATGTAAC AACTTTTTTC TTGTAAATTG TCAGCAGACA 721 GTATGGATTT TCTTGCAGCC TATTGTAAGA AAAAAAAA Predicted gene structure (within gDNA segment 15005 to 12750): Exon 1 14355 14332 ( 24 n); cDNA 1 24 ( 24 n); score: 1.000 Intron 1 14331 14174 ( 158 n); Pd: 1.000 (s: 0), Pa: 0.980 (s: 1.00) Exon 2 14173 13446 ( 728 n); cDNA 25 752 ( 728 n); score: 0.997 MATCH C01HBa0163B20.1- SGN-E548589- 0.997 752 0.992 C PGS_C01HBa0163B20.1-_SGN-E548589- (14355 14332,14173 13446) Alignment (genomic DNA sequence = upper lines): GACCCTCAAA TCCATTATTT TCAGGTATAT ATTACATTGT TATTACCTAA ATTAAAATTA 14296 |||||||||| |||||||||| |||| GACCCTCAAA TCCATTATTT TCAG...... .......... .......... .......... 24 TATTATAGTA AGTGTTGAAC CTCTTATTCG TATTTTTTCG TATGATTTGC TCATTCATAT 14236 .......... .......... .......... .......... .......... .......... 24 TTTAAATTTC TTAATAAAAA TTGGTTCATC AATGCAATTT TTGCTCTCCC CTGTTTTAAT 14176 .......... .......... .......... .......... .......... .......... 24 AGATTTTGGA AGAAGCAAGA AAACACAAAA TCAGAGAAAC TGCGAGGTCA TCCATAGATA 14116 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..ATTTTGGA AGAAGCAAGA AAACACAAAA TCAGAGAAAC TGCGAGGTCA TCCATAGATA 82 CACTTCACTT CAAGCTACAG AAACCCATTT CAAAAGATGA ATCATCGAAG AAGATAAAAA 14056 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTCACTT CAAGCTACAG AAACCCATTT CAAAAGATGA ATCATCGAAG AAGATAAAAA 142 AGAACAGTAG CCGTAAAAGA TGGTGGAAAA ATGCTCTGCT TTTCTTCAAA AAGACCAAAT 13996 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAACAGTAG CCGTAAAAGA TGGTGGAAAA ATGCTCTGCT TTTCTTCAAA AAGACCAAAT 202 CCAACAATGA AAAATTCTAC GGCGCCGACG GTGAAGTTCA TCACCGGCGA CCTAATTTTC 13936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAACAATGA AAAATTCTAC GGCGCCGACG GTGAAGTTCA TCACCGGCGA CCTAATTTTC 262 AAGGATCGAT TTCTGGGCCG GTATACATTA CTGAGAGCAG AAGTGGGTCG AACACGCCTT 13876 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGATCGAT TTCTGGGCCG GTATACATTA CTGAGAGCAG AAGTGGGTCG AACACGCCTT 322 ACCGTACAAC AAGCCGGCCG TCCTCCGGTC CACTCGCCGG AACTTTAACT CCTAACCGGA 13816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGTACAAC AAGCCGGCCG TCCTCCGGTC CACTCGCCGG AACTTTAACT CCTAACCGGA 382 AAGGTGATTT GGAGATCCCC TACATTAACC TCAGGGAGTT TAACATGGAC CAGCAGCAGC 13756 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGATTT GGAGATCCCC TACATTAACC TCAGGGAGTT TAACATGGAC CAGCAGCAGC 442 AGCATAAGAT CTGTACAGCC TCGCCTATGC CAATATATTT GGTCACGTGA ACAGAGCAGT 13696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCATAAGAT CTGTACAGCC TCGCCTATGC CAATATATTT GGTCACGTGA ACAGAGCAGT 502 ATTTAATTAA TTAAATTGAT AATTTTAAGT GTTACTGCTA ATTAATTACT CTTATTATCC 13636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTAATTAA TTAAATTGAT AATTTTAAGT GTTACTGCTA ATTAATTACT CTTATTATCC 562 TAATTTAGAC CTTTTTAGGG TTTCAAATTA CTTGAAAGTT GATGACCCAT GGGTATCCTC 13576 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTTAGAC CTTTTTAGGG TTTCAAATTA CTTGAAAGTT GATGACCCAT GGGTATCCTC 622 TTTTAGTTCT TTGAATTATG TGCAACTTTC TTTTATGTAA AAGTGCTTTA ATATTGATGG 13516 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTAGTTCT TTGAATTATG TGCAACTTTC TTTTATGTAA AAGTGCTTTA ATATTGATGG 682 CATGTAACAA CTTTTTTCTT GTAAATTGTC AGCAGACAGT ATGGATTTTC TTGCAGCCTA 13456 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGTAACAA CTTTTTTCTT GTAAATTGTC AGCAGACAGT ATGGATTTTC TTGCAGCCTA 742 TTGTAATGAA 13446 |||||| || TTGTAAGAAA 752 hqPGS_C01HBa0163B20.1-_SGN-E548589- (14355 14332,14173 13446) ******************************************************************************** EST sequence 246 +strand 839 n (File: SGN-E541683+) 1 TAAAAATACC ATTCCCTAAT ATTCATCCAC CATTTTCCCT TAGAAAATGT CAAACAAATC 61 CCCCATTTTT CCTATTGTTG AACCTCAACA CTTCAGTGAC TATGGCTTCG ACCCTCAAAT 121 CCATTATTTT CAGATTTTGG AAGAAGCAAG AAAACACAAA ATCAGAGAAA CTGCGAGGTC 181 ATCCATAGAT ACACTTCACT TCAAGCTACA GAAACCCATT TCAAAAGATG AATCATCGAA 241 GAAGATAAAA AAGAACAGTA GCCGTAAAAG ATGGTGGAAA AATGCTCTGC TTTTCTTCAA 301 AAAGACCAAA TCCAACAATG AAAAATTCTA CGGCGCCGAC GGTGAAGTTC ATCACCGGCG 361 ACCTAATTTT CAAGGATCGA TTTCTGGGCC GGTATACATT ACTGAGAGCA GAAGTGGGTC 421 GAACACGCCT TACCGTACAA CAAGCCGGCC GTCCTCCGGT CCACTCGCCG GAACTTTAAC 481 TCCTAACCGG AAAGGTGATT TGGAGATCCC CTACATTAAC CTCAGGGAGT TTAACATGGA 541 CCAGCAGCAG CAGCATAAGA TCTGTACAGC CTCGCCTATG CCAATATATT TGGTCACGTG 601 AACAGAGCAG TATTTAATTA ATTAAATTGA TAATTTTAAG TGTTACTGCT AATTAATTAC 661 TCTTATTATC CTAATTTAGA CCTTTTTAGG GTTTCAAATT ACTTGAAAGT TGATGACCCA 721 TGGGTATCCT CTTTTAGTTC TTTGAATTAT GTGCAACTTT CTTTTATGTA AAAGTGCTTT 781 AATATTGATG GCATGTAACA ACTTTTTTCT TGTAATTGTC AGCAGACAGT ATGGATTTT Predicted gene structure (within gDNA segment 15064 to 12857): Exon 1 14464 14332 ( 133 n); cDNA 1 133 ( 133 n); score: 1.000 Intron 1 14331 14174 ( 158 n); Pd: 1.000 (s: 1.00), Pa: 0.980 (s: 1.00) Exon 2 14173 13467 ( 707 n); cDNA 134 839 ( 706 n); score: 0.999 MATCH C01HBa0163B20.1- SGN-E541683+ 0.999 840 1.001 C PGS_C01HBa0163B20.1-_SGN-E541683+ (14464 14332,14173 13467) Alignment (genomic DNA sequence = upper lines): TAAAAATACC ATTCCCTAAT ATTCATCCAC CATTTTCCCT TAGAAAATGT CAAACAAATC 14405 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAATACC ATTCCCTAAT ATTCATCCAC CATTTTCCCT TAGAAAATGT CAAACAAATC 60 CCCCATTTTT CCTATTGTTG AACCTCAACA CTTCAGTGAC TATGGCTTCG ACCCTCAAAT 14345 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCATTTTT CCTATTGTTG AACCTCAACA CTTCAGTGAC TATGGCTTCG ACCCTCAAAT 120 CCATTATTTT CAGGTATATA TTACATTGTT ATTACCTAAA TTAAAATTAT ATTATAGTAA 14285 |||||||||| ||| CCATTATTTT CAG....... .......... .......... .......... .......... 133 GTGTTGAACC TCTTATTCGT ATTTTTTCGT ATGATTTGCT CATTCATATT TTAAATTTCT 14225 .......... .......... .......... .......... .......... .......... 133 TAATAAAAAT TGGTTCATCA ATGCAATTTT TGCTCTCCCC TGTTTTAATA GATTTTGGAA 14165 ||||||||| .......... .......... .......... .......... .......... .ATTTTGGAA 142 GAAGCAAGAA AACACAAAAT CAGAGAAACT GCGAGGTCAT CCATAGATAC ACTTCACTTC 14105 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCAAGAA AACACAAAAT CAGAGAAACT GCGAGGTCAT CCATAGATAC ACTTCACTTC 202 AAGCTACAGA AACCCATTTC AAAAGATGAA TCATCGAAGA AGATAAAAAA GAACAGTAGC 14045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTACAGA AACCCATTTC AAAAGATGAA TCATCGAAGA AGATAAAAAA GAACAGTAGC 262 CGTAAAAGAT GGTGGAAAAA TGCTCTGCTT TTCTTCAAAA AGACCAAATC CAACAATGAA 13985 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTAAAAGAT GGTGGAAAAA TGCTCTGCTT TTCTTCAAAA AGACCAAATC CAACAATGAA 322 AAATTCTACG GCGCCGACGG TGAAGTTCAT CACCGGCGAC CTAATTTTCA AGGATCGATT 13925 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAATTCTACG GCGCCGACGG TGAAGTTCAT CACCGGCGAC CTAATTTTCA AGGATCGATT 382 TCTGGGCCGG TATACATTAC TGAGAGCAGA AGTGGGTCGA ACACGCCTTA CCGTACAACA 13865 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGGGCCGG TATACATTAC TGAGAGCAGA AGTGGGTCGA ACACGCCTTA CCGTACAACA 442 AGCCGGCCGT CCTCCGGTCC ACTCGCCGGA ACTTTAACTC CTAACCGGAA AGGTGATTTG 13805 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCGGCCGT CCTCCGGTCC ACTCGCCGGA ACTTTAACTC CTAACCGGAA AGGTGATTTG 502 GAGATCCCCT ACATTAACCT CAGGGAGTTT AACATGGACC AGCAGCAGCA GCATAAGATC 13745 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGATCCCCT ACATTAACCT CAGGGAGTTT AACATGGACC AGCAGCAGCA GCATAAGATC 562 TGTACAGCCT CGCCTATGCC AATATATTTG GTCACGTGAA CAGAGCAGTA TTTAATTAAT 13685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACAGCCT CGCCTATGCC AATATATTTG GTCACGTGAA CAGAGCAGTA TTTAATTAAT 622 TAAATTGATA ATTTTAAGTG TTACTGCTAA TTAATTACTC TTATTATCCT AATTTAGACC 13625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAATTGATA ATTTTAAGTG TTACTGCTAA TTAATTACTC TTATTATCCT AATTTAGACC 682 TTTTTAGGGT TTCAAATTAC TTGAAAGTTG ATGACCCATG GGTATCCTCT TTTAGTTCTT 13565 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTAGGGT TTCAAATTAC TTGAAAGTTG ATGACCCATG GGTATCCTCT TTTAGTTCTT 742 TGAATTATGT GCAACTTTCT TTTATGTAAA AGTGCTTTAA TATTGATGGC ATGTAACAAC 13505 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATTATGT GCAACTTTCT TTTATGTAAA AGTGCTTTAA TATTGATGGC ATGTAACAAC 802 TTTTTTCTTG TAAATTGTCA GCAGACAGTA TGGATTTT 13467 |||||||||| | |||||||| |||||||||| |||||||| TTTTTTCTTG T-AATTGTCA GCAGACAGTA TGGATTTT 839 hqPGS_C01HBa0163B20.1-_SGN-E541683+ (14464 14332,14173 13467) ******************************************************************************** EST sequence 255 +strand 331 n (File: SGN-E298606+) 1 AAAAATACCA TTCCCTAATA TTCATCCACC ATTTTCCCTT AGAAAATGTC AAACAAATCC 61 CCCATTTTTC CTATTGTTGA ACCTCAACAC TTCAGTGACT ATGGCTTCGA CCCTCAAATC 121 CATTATTTTC AGATTTTGGA AGAAGCAAGA AAACACAAAA TCAGAGAAAC TGCGAGGTCA 181 TCCATAGATA CACTTCACTT CAAGCTACAG AAACCCATTT CAAAAGATGA ATCATCGAAG 241 AAGATAAAAA AGAACAGTCG CCGTAAAAGA TGGTGGAAAA ATGCTCTGCT TTTCTTCAAA 301 AAGACCAAAT CCAACAATGA AAAATTCTAC G Predicted gene structure (within gDNA segment 15063 to 13365): Exon 1 14463 14332 ( 132 n); cDNA 1 132 ( 132 n); score: 1.000 Intron 1 14331 14174 ( 158 n); Pd: 1.000 (s: 1.00), Pa: 0.980 (s: 1.00) Exon 2 14173 13975 ( 199 n); cDNA 133 331 ( 199 n); score: 0.995 MATCH C01HBa0163B20.1- SGN-E298606+ 0.997 331 1.000 C PGS_C01HBa0163B20.1-_SGN-E298606+ (14463 14332,14173 13975) Alignment (genomic DNA sequence = upper lines): AAAAATACCA TTCCCTAATA TTCATCCACC ATTTTCCCTT AGAAAATGTC AAACAAATCC 14404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATACCA TTCCCTAATA TTCATCCACC ATTTTCCCTT AGAAAATGTC AAACAAATCC 60 CCCATTTTTC CTATTGTTGA ACCTCAACAC TTCAGTGACT ATGGCTTCGA CCCTCAAATC 14344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCATTTTTC CTATTGTTGA ACCTCAACAC TTCAGTGACT ATGGCTTCGA CCCTCAAATC 120 CATTATTTTC AGGTATATAT TACATTGTTA TTACCTAAAT TAAAATTATA TTATAGTAAG 14284 |||||||||| || CATTATTTTC AG........ .......... .......... .......... .......... 132 TGTTGAACCT CTTATTCGTA TTTTTTCGTA TGATTTGCTC ATTCATATTT TAAATTTCTT 14224 .......... .......... .......... .......... .......... .......... 132 AATAAAAATT GGTTCATCAA TGCAATTTTT GCTCTCCCCT GTTTTAATAG ATTTTGGAAG 14164 |||||||||| .......... .......... .......... .......... .......... ATTTTGGAAG 142 AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA CTTCACTTCA 14104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA CTTCACTTCA 202 AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG AACAGTAGCC 14044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG AACAGTCGCC 262 GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC AACAATGAAA 13984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC AACAATGAAA 322 AATTCTACG 13975 ||||||||| AATTCTACG 331 hqPGS_C01HBa0163B20.1-_SGN-E298606+ (14463 14332,14173 13975) ******************************************************************************** EST sequence 17 -strand 391 n (File: SGN-E218860-) 1 TCCTCCGGTC CACTCGCCGG AACTTTAACT CCTAACCGGA AAGGTGATTT GGAGATCCCC 61 TACAATTAAC CTCAGGGAGT TTAACATGGA CCAGCAGCAG CAGCATAAGA TCTGTTCAGC 121 CTCGCCTATG CCAATATATT TGGTCACGTG AACAGAGCAG TATTTAATTA ATTAAATTGA 181 TAATTTTAAG TGTTACTGCT AATTAATTAC TCTTATTATC CTAATTTAGA CCTTTTTAGG 241 GTTTCAAATT ACTTGAAAGT TGATGACCCA TGGGTATCCT CTTTTAGTTC TTTGAATTAT 301 GTGCAACTTT CTTTTATGTA AAAGTGCTTT AATATTGATG GCATGTACCA ACTTTTTTCT 361 TGTAAAAAAA GAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 14465 to 12641): Exon 1 13855 13492 ( 364 n); cDNA 1 365 ( 365 n); score: 0.988 PPA cDNA 366 391 MATCH C01HBa0163B20.1- SGN-E218860- 0.988 364 0.931 C PGS_C01HBa0163B20.1-_SGN-E218860- (13855 13492) Alignment (genomic DNA sequence = upper lines): TCCTCCGGTC CACTCGCCGG AACTTTAACT CCTAACCGGA AAGGTGATTT GGAGATCCCC 13796 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTCCGGTC CACTCGCCGG AACTTTAACT CCTAACCGGA AAGGTGATTT GGAGATCCCC 60 TAC-ATTAAC CTCAGGGAGT TTAACATGGA CCAGCAGCAG CAGCATAAGA TCTGTACAGC 13737 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TACAATTAAC CTCAGGGAGT TTAACATGGA CCAGCAGCAG CAGCATAAGA TCTGTTCAGC 120 CTCGCCTATG CCAATATATT TGGTCACGTG AACAGAGCAG TATTTAATTA ATTAAATTGA 13677 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCGCCTATG CCAATATATT TGGTCACGTG AACAGAGCAG TATTTAATTA ATTAAATTGA 180 TAATTTTAAG TGTTACTGCT AATTAATTAC TCTTATTATC CTAATTTAGA CCTTTTTAGG 13617 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTTTAAG TGTTACTGCT AATTAATTAC TCTTATTATC CTAATTTAGA CCTTTTTAGG 240 GTTTCAAATT ACTTGAAAGT TGATGACCCA TGGGTATCCT CTTTTAGTTC TTTGAATTAT 13557 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCAAATT ACTTGAAAGT TGATGACCCA TGGGTATCCT CTTTTAGTTC TTTGAATTAT 300 GTGCAACTTT CTTTTATGTA AAAGTGCTTT AATATTGATG GCATGTAACA ACTTTTTTCT 13497 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| GTGCAACTTT CTTTTATGTA AAAGTGCTTT AATATTGATG GCATGTACCA ACTTTTTTCT 360 TGTAA 13492 ||||| TGTAA 365 hqPGS_C01HBa0163B20.1-_SGN-E218860- (13855 13492) ******************************************************************************** EST sequence 225 +strand 655 n (File: SGN-E228492+) 1 TCAGATTTTG TAAGAAGCAA GAAAACACAA AATCAGAGAA ACTGCGAGGT CATCCATAGA 61 TACACTTCAC TTCAAGCTAC AGAAACCCAT TTCAAAAGAT GAATCATCGA AGAAGATAAA 121 AAAGAACAGT AGCCGTAAAA GATGGTGGAA AAATGCTCTG CTTTTCTTCA AAAAGACCAA 181 ATCCAACAAT GAAAAATTCT ACGGCGCCGA CGGTGAAGTT CATCACCGGC GACCTAATTT 241 TCAAGGATCG ATTTCTGGGC CGGTATACAT TACTGAGAGC AGAAGTGGGT CGAACACGCC 301 TTACCGTACA ACAAGCCGGC CGTCCTCCGG TCCACTCGCC GGAACTTTAA CTCCTAACCG 361 GAAAGGTGAT TTGGAGATCC CCTACATTAA CCTCAGGGAG TTTAACATGG ACCAGCAGCA 421 GCAGCATAAG ATCTGTACAG CCTCGCCTAT GCCAATATAT TTGGTCACGT GAACAGAGCA 481 GTATTTAATT AATTAAATTG ATAATTTTAA GTGTTACTGC TAATTAATTA CTCTTATTAT 541 CCTAATTTAG ACCTTTTTAG GGTTTCAAAT TACTTGAAAG TTGATGACCC ATGGGTATCC 601 TCTTTTAGTT CTTTGAATTA TGTGCAACTT TCTTTTATGT AAAAGTGCTT TAATA Predicted gene structure (within gDNA segment 14876 to 12913): Exon 1 14173 13523 ( 651 n); cDNA 5 655 ( 651 n); score: 0.998 MATCH C01HBa0163B20.1- SGN-E228492+ 0.998 651 0.994 C PGS_C01HBa0163B20.1-_SGN-E228492+ (14173 13523) Alignment (genomic DNA sequence = upper lines): ATTTTGGAAG AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA 14114 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTGTAAG AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA 64 CTTCACTTCA AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG 14054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCACTTCA AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG 124 AACAGTAGCC GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC 13994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAGTAGCC GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC 184 AACAATGAAA AATTCTACGG CGCCGACGGT GAAGTTCATC ACCGGCGACC TAATTTTCAA 13934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAATGAAA AATTCTACGG CGCCGACGGT GAAGTTCATC ACCGGCGACC TAATTTTCAA 244 GGATCGATTT CTGGGCCGGT ATACATTACT GAGAGCAGAA GTGGGTCGAA CACGCCTTAC 13874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATCGATTT CTGGGCCGGT ATACATTACT GAGAGCAGAA GTGGGTCGAA CACGCCTTAC 304 CGTACAACAA GCCGGCCGTC CTCCGGTCCA CTCGCCGGAA CTTTAACTCC TAACCGGAAA 13814 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTACAACAA GCCGGCCGTC CTCCGGTCCA CTCGCCGGAA CTTTAACTCC TAACCGGAAA 364 GGTGATTTGG AGATCCCCTA CATTAACCTC AGGGAGTTTA ACATGGACCA GCAGCAGCAG 13754 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGATTTGG AGATCCCCTA CATTAACCTC AGGGAGTTTA ACATGGACCA GCAGCAGCAG 424 CATAAGATCT GTACAGCCTC GCCTATGCCA ATATATTTGG TCACGTGAAC AGAGCAGTAT 13694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAAGATCT GTACAGCCTC GCCTATGCCA ATATATTTGG TCACGTGAAC AGAGCAGTAT 484 TTAATTAATT AAATTGATAA TTTTAAGTGT TACTGCTAAT TAATTACTCT TATTATCCTA 13634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAATTAATT AAATTGATAA TTTTAAGTGT TACTGCTAAT TAATTACTCT TATTATCCTA 544 ATTTAGACCT TTTTAGGGTT TCAAATTACT TGAAAGTTGA TGACCCATGG GTATCCTCTT 13574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTAGACCT TTTTAGGGTT TCAAATTACT TGAAAGTTGA TGACCCATGG GTATCCTCTT 604 TTAGTTCTTT GAATTATGTG CAACTTTCTT TTATGTAAAA GTGCTTTAAT A 13523 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | TTAGTTCTTT GAATTATGTG CAACTTTCTT TTATGTAAAA GTGCTTTAAT A 655 hqPGS_C01HBa0163B20.1-_SGN-E228492+ (14173 13523) ******************************************************************************** EST sequence 217 +strand 304 n (File: SGN-E242504+) 1 TCAGATTTTG TTAGAAGCAA GAAAACACAT AATCAGAGAA ACTGCGAGGT CATCCATAGA 61 TACACTTCAC TTCAAGCTAC AGAAACCCAT TTCAAAAGAT GAATCATCGA AGAAGATAAA 121 AAAGAACAGT AGCCGTAAAA GATGGGGGAA AAATGCTCTG CTTTTCTTCA AAAAGACCAA 181 ATCCAACACT GAAAAATTCT ACGGCGCCGA CGGTGAAGTT CATCACCGGC GACCTAATTT 241 TCAAGGATCG AATTCTGGGC TCGGATACAT TACTGAGAGC AGAAGTGGGT CGAACACGCC 301 TTAC Predicted gene structure (within gDNA segment 14885 to 13264): Exon 1 14173 13874 ( 300 n); cDNA 5 304 ( 300 n); score: 0.970 MATCH C01HBa0163B20.1- SGN-E242504+ 0.970 300 0.987 C PGS_C01HBa0163B20.1-_SGN-E242504+ (14173 13874) Alignment (genomic DNA sequence = upper lines): ATTTTGGAAG AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA 14114 |||||| || |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ATTTTGTTAG AAGCAAGAAA ACACATAATC AGAGAAACTG CGAGGTCATC CATAGATACA 64 CTTCACTTCA AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG 14054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCACTTCA AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG 124 AACAGTAGCC GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC 13994 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| AACAGTAGCC GTAAAAGATG GGGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC 184 AACAATGAAA AATTCTACGG CGCCGACGGT GAAGTTCATC ACCGGCGACC TAATTTTCAA 13934 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACACTGAAA AATTCTACGG CGCCGACGGT GAAGTTCATC ACCGGCGACC TAATTTTCAA 244 GGATCGATTT CTGGGCCGGT ATACATTACT GAGAGCAGAA GTGGGTCGAA CACGCCTTAC 13874 ||||||| || |||||| | |||||||||| |||||||||| |||||||||| |||||||||| GGATCGAATT CTGGGCTCGG ATACATTACT GAGAGCAGAA GTGGGTCGAA CACGCCTTAC 304 hqPGS_C01HBa0163B20.1-_SGN-E242504+ (14173 13874) ******************************************************************************** EST sequence 221 +strand 296 n (File: SGN-E244559+) 1 TCAGATTTTG TAAGAAGCAA GAAAACACAA AATCAGAGAA ACTGCGAGGT CATCCATAGA 61 TACACTTCAC TTCAAGCTAC AGAAACCCAT TTCAAAAGAT GAATCATCGA AGAAGATAAA 121 AAAGAACAGT AGCCGTAAAA GATGGTGGAA AAATGCTCTG CTTTTCTTCA AAAAGACCAA 181 ATCCAACAAT GAAAAATTCT ACGGCGCCGA CGGTGAAGTT CATCACCGGC GACCTAATTT 241 TCAAGGATCG ATTTCTGGGC CGGTATACAT TACTGAGAGC AGAAGTGGGT CGAACA Predicted gene structure (within gDNA segment 14876 to 13272): Exon 1 14173 13882 ( 292 n); cDNA 5 296 ( 292 n); score: 0.997 MATCH C01HBa0163B20.1- SGN-E244559+ 0.997 292 0.986 C PGS_C01HBa0163B20.1-_SGN-E244559+ (14173 13882) Alignment (genomic DNA sequence = upper lines): ATTTTGGAAG AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA 14114 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTTGTAAG AAGCAAGAAA ACACAAAATC AGAGAAACTG CGAGGTCATC CATAGATACA 64 CTTCACTTCA AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG 14054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTCACTTCA AGCTACAGAA ACCCATTTCA AAAGATGAAT CATCGAAGAA GATAAAAAAG 124 AACAGTAGCC GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC 13994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAGTAGCC GTAAAAGATG GTGGAAAAAT GCTCTGCTTT TCTTCAAAAA GACCAAATCC 184 AACAATGAAA AATTCTACGG CGCCGACGGT GAAGTTCATC ACCGGCGACC TAATTTTCAA 13934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAATGAAA AATTCTACGG CGCCGACGGT GAAGTTCATC ACCGGCGACC TAATTTTCAA 244 GGATCGATTT CTGGGCCGGT ATACATTACT GAGAGCAGAA GTGGGTCGAA CA 13882 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || GGATCGATTT CTGGGCCGGT ATACATTACT GAGAGCAGAA GTGGGTCGAA CA 296 hqPGS_C01HBa0163B20.1-_SGN-E244559+ (14173 13882) ******************************************************************************** EST sequence 24 +strand 557 n (File: SGN-E347325+) 1 TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC ATCCATATAT 61 ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 121 ATCTTCTACA ATAATTTTGC TATATTTACA ATTACAGATA GTCCATCTCA TTGGCAGTAT 181 TTACCATGAA TAACGATACC CCAAGCATGA TTCATGATCC ATTGATTGAT TCCACAGGAG 241 ATGGAGGCTA TGCATTGAGT GGAAAAATTA TGCTAAGTGC TATTGTTATC TTATTCACTG 301 TTGTTGTTTT CATGGGGGGT CTTCATTTAT ATGCTCGTTG GTACCTTGTG TCTCAGCGCC 361 GCCGTGAACT CCTTCGCCGC CGTAGGGTCA ACCATCGACG GACTCATATT GTTTTCTACG 421 TTGATAATCC TGGTTCCGGT TTGTCTGATG CTAACCGGGG TGTGGAACAG GCGGTTCTCA 481 GTTCCTTGCC GGTTTTTGTT TATTCCGACA AGACTCACCC GGAACCGCTG GAATGTGCTG 541 TTTGTTTATC GGAATTT Predicted gene structure (within gDNA segment 35752 to 37516): Exon 1 36352 36906 ( 555 n); cDNA 1 557 ( 557 n); score: 0.987 MATCH C01HBa0163B20.1+ SGN-E347325+ 0.987 555 0.996 C PGS_C01HBa0163B20.1+_SGN-E347325+ (36352 36906) Alignment (genomic DNA sequence = upper lines): TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC ATCCATATAT 36411 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC ATCCATATAT 60 ATATATATAT ATAT--ATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 36469 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 120 ATCTTCTACA ATAATTTTGC TATATTTACA ATTACAGATA GTCCATCTCA TTGGCAGTAT 36529 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTCTACA ATAATTTTGC TATATTTACA ATTACAGATA GTCCATCTCA TTGGCAGTAT 180 TTACCATGAA TAACGATACC CCAAGCATGA TTCATGATCC ATTGATTGAT TCCACAGGAG 36589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACCATGAA TAACGATACC CCAAGCATGA TTCATGATCC ATTGATTGAT TCCACAGGAG 240 ATGGAGGCTA TGCATTGAGT GGAAAAATTA TGCTAAGTGC TATTGTTATC TTATTCACTG 36649 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGAGGCTA TGCATTGAGT GGAAAAATTA TGCTAAGTGC TATTGTTATC TTATTCACTG 300 TTGTTGTTTT CATGGTGGGT CTTCATTTAT ATGCTCGTTG GTACCTTGTG TCTCAGCGCC 36709 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGTTTT CATGGGGGGT CTTCATTTAT ATGCTCGTTG GTACCTTGTG TCTCAGCGCC 360 GCCGTGAACT CCTTCGCCGC CGTAGGGTCA ACCATCGACG GACTCATATT GTTTTCTACG 36769 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGTGAACT CCTTCGCCGC CGTAGGGTCA ACCATCGACG GACTCATATT GTTTTCTACG 420 TTGATAATCC TGGTTCCGGT TTGTCTGATG CTAACCGGGG TTTGGAACAG GCGGTTCTCA 36829 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| TTGATAATCC TGGTTCCGGT TTGTCTGATG CTAACCGGGG TGTGGAACAG GCGGTTCTCA 480 GTTCCTTGCC GGTTTTTGTT TATTCCGACA AGACTCACCC GGAACCGCTG GAATGTGCTG 36889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCTTGCC GGTTTTTGTT TATTCCGACA AGACTCACCC GGAACCGCTG GAATGTGCTG 540 TTTGTTTATC GGAATTT 36906 |||||||||| ||||||| TTTGTTTATC GGAATTT 557 hqPGS_C01HBa0163B20.1+_SGN-E347325+ (36352 36906) ******************************************************************************** EST sequence 18 +strand 547 n (File: SGN-E315555+) 1 ACTTTCCTCC TTCTCTCTTC TTCCTTCAAC TTGCCCATTT CCCCATCCAT ATATATATAT 61 ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATCTTC 121 TACAATAATT TTGCTATATT TACAATTACA GATAGTCCAT CTCATTGGCA GTATTTACCA 181 TGAATAACGA TACCCCAAGC ATGATTCATG ATCCATTGAT TGATTCCACA GGAGATGGAG 241 GCTATGCATT GAGTGGAAAA ATTATGCTAA GTGCTATTGT TATCTTATTC ACTGTTGTTG 301 TTTTCATGGT GGGTCTTCAT TTATATGCTC GTTGGTACCT TGTGTCTCAG CGCCGCCGTG 361 AACTCCTTCG CCGCCGTAGG GTCAACCATC GACGGACTCA TATTGTTTTC TACGTTGATA 421 ATCCTGGTTC CGGTTTGTCT GATGCTAACC GGGGTTTGGA ACAGGCGGTT CTCAGTTCCT 481 TGCCGGTTTT TGTTTATTCC GACAAGACTC ACCCGGAACC GCTGGAATGT GCTGTTTGTT 541 TATCGGA Predicted gene structure (within gDNA segment 35758 to 37512): Exon 1 36358 36902 ( 545 n); cDNA 1 547 ( 547 n); score: 0.991 MATCH C01HBa0163B20.1+ SGN-E315555+ 0.991 545 0.996 C PGS_C01HBa0163B20.1+_SGN-E315555+ (36358 36902) Alignment (genomic DNA sequence = upper lines): ACTTTCCTCC TTCTCTCTTC TTCCTTCAAC TTGCCCATTT CCCCATCCAT ATATATATAT 36417 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTCCTCC TTCTCTCTTC TTCCTTCAAC TTGCCCATTT CCCCATCCAT ATATATATAT 60 ATATATATAT ATAT--ATAT ATATATATAT ATATATATAT ATATATATAT ATATATCTTC 36475 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATCTTC 120 TACAATAATT TTGCTATATT TACAATTACA GATAGTCCAT CTCATTGGCA GTATTTACCA 36535 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAATAATT TTGCTATATT TACAATTACA GATAGTCCAT CTCATTGGCA GTATTTACCA 180 TGAATAACGA TACCCCAAGC ATGATTCATG ATCCATTGAT TGATTCCACA GGAGATGGAG 36595 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATAACGA TACCCCAAGC ATGATTCATG ATCCATTGAT TGATTCCACA GGAGATGGAG 240 GCTATGCATT GAGTGGAAAA ATTATGCTAA GTGCTATTGT TATCTTATTC ACTGTTGTTG 36655 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTATGCATT GAGTGGAAAA ATTATGCTAA GTGCTATTGT TATCTTATTC ACTGTTGTTG 300 TTTTCATGGT GGGTCTTCAT TTATATGCTC GTTGGTACCT TGTGTCTCAG CGCCGCCGTG 36715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCATGGT GGGTCTTCAT TTATATGCTC GTTGGTACCT TGTGTCTCAG CGCCGCCGTG 360 AACTCCTTCG CCGCCGTAGG GTCAACCATC GACGGACTCA TATTGTTTTC TACGTTGATA 36775 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTCCTTCG CCGCCGTAGG GTCAACCATC GACGGACTCA TATTGTTTTC TACGTTGATA 420 ATCCTGGTTC CGGTTTGTCT GATGCTAACC GGGGTTTGGA ACAGGCGGTT CTCAGTTCCT 36835 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTGGTTC CGGTTTGTCT GATGCTAACC GGGGTTTGGA ACAGGCGGTT CTCAGTTCCT 480 TGCCGGTTTT TGTTTATTCC GACAAGACTC ACCCGGAACC GCTGGAATGT GCTGTTTGTT 36895 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCGGTTTT TGTTTATTCC GACAAGACTC ACCCGGAACC GCTGGAATGT GCTGTTTGTT 540 TATCGGA 36902 ||||||| TATCGGA 547 hqPGS_C01HBa0163B20.1+_SGN-E315555+ (36358 36902) ******************************************************************************** EST sequence 138 +strand 532 n (File: SGN-E276234+) 1 ATTTTGCTAT ATTTACAATT ACAGATTTTC CATCTCATTG GCAGTATTTA CCATGAATAA 61 CGATACCCCA AGCATGATTC ATGATCCATT GATTGATTCC ACAGGAGATG GAGGCTATGC 121 ATTGAGTGGA AAAATTATGC TAAGTGCTAT TGTTATCTTA TTCACTGTTG TTGTTTTCAT 181 GGTGGGTCTT CATTTATATG CTCGTTGGTA CCTTGTGTCT CAGCGCCGCC GTGAACTCCT 241 TCGCCGCCGT AGGGTCAACC ATCGACGGAC TCATATTGTT TTCTACGTTG ATAATCCTGG 301 TTCCGGTTTG TCTGATGCTA ACCGGGGTTT GGAACAGGCG GTTCTCAGTT CCTTGCCGGT 361 TTTTGTTTAT TCCGACAAGA CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA 421 ATTTGAGGAG AATGAAAAGG GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA 481 ATGTATTGAT ATGTGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT CT Predicted gene structure (within gDNA segment 35883 to 37624): Exon 1 36483 37014 ( 532 n); cDNA 1 532 ( 532 n); score: 0.996 MATCH C01HBa0163B20.1+ SGN-E276234+ 0.996 532 1.000 C PGS_C01HBa0163B20.1+_SGN-E276234+ (36483 37014) Alignment (genomic DNA sequence = upper lines): ATTTTGCTAT ATTTACAATT ACAGATAGTC CATCTCATTG GCAGTATTTA CCATGAATAA 36542 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| ATTTTGCTAT ATTTACAATT ACAGATTTTC CATCTCATTG GCAGTATTTA CCATGAATAA 60 CGATACCCCA AGCATGATTC ATGATCCATT GATTGATTCC ACAGGAGATG GAGGCTATGC 36602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATACCCCA AGCATGATTC ATGATCCATT GATTGATTCC ACAGGAGATG GAGGCTATGC 120 ATTGAGTGGA AAAATTATGC TAAGTGCTAT TGTTATCTTA TTCACTGTTG TTGTTTTCAT 36662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGAGTGGA AAAATTATGC TAAGTGCTAT TGTTATCTTA TTCACTGTTG TTGTTTTCAT 180 GGTGGGTCTT CATTTATATG CTCGTTGGTA CCTTGTGTCT CAGCGCCGCC GTGAACTCCT 36722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGGTCTT CATTTATATG CTCGTTGGTA CCTTGTGTCT CAGCGCCGCC GTGAACTCCT 240 TCGCCGCCGT AGGGTCAACC ATCGACGGAC TCATATTGTT TTCTACGTTG ATAATCCTGG 36782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGCCGCCGT AGGGTCAACC ATCGACGGAC TCATATTGTT TTCTACGTTG ATAATCCTGG 300 TTCCGGTTTG TCTGATGCTA ACCGGGGTTT GGAACAGGCG GTTCTCAGTT CCTTGCCGGT 36842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCGGTTTG TCTGATGCTA ACCGGGGTTT GGAACAGGCG GTTCTCAGTT CCTTGCCGGT 360 TTTTGTTTAT TCCGACAAGA CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA 36902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGTTTAT TCCGACAAGA CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA 420 ATTTGAGGAG AATGAAAAGG GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA 36962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGAGGAG AATGAAAAGG GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA 480 ATGTATTGAT ATGTGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT CT 37014 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ATGTATTGAT ATGTGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT CT 532 hqPGS_C01HBa0163B20.1+_SGN-E276234+ (36483 37014) ******************************************************************************** EST sequence 34 +strand 631 n (File: SGN-E306864+) 1 TCTCATTGGC AGTATTTACC ATGAATAACG ATACCCCAAG CATGATTCAT GATCCATTGA 61 TTGATTCCAC AGGAGATGGA GGCTATGCAT TGAGTGGAAA AATTATGCTA AGTGCTATTG 121 TTATCTTATT CACTGTTGTT GTTTTCATGG TGGGTCTTCA TTTATATGCT CGTTGGTACC 181 TTGTGTCTCA GCGCCGCCGT GAACTCCTTC GCCGCCGTAG GGTCAACCAT CGACGGACTC 241 ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC CGGGGTTTGG 301 AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT CACCCGGAAC 361 CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT CGGGTTTTAC 421 CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT TCTCATTCTA 481 CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT CGGACCGGAT ATTAACCGGG 541 TTGAGGTGGC GGTAACAGTG AACGAACCGG GTTCGAGTTC GGGTTGTGAG GAGAATAGTA 601 GTCATCATTC TAATATGACG CCGTTGGGTT G Predicted gene structure (within gDNA segment 35915 to 37755): Exon 1 36515 37145 ( 631 n); cDNA 1 631 ( 631 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E306864+ 1.000 631 1.000 C PGS_C01HBa0163B20.1+_SGN-E306864+ (36515 37145) Alignment (genomic DNA sequence = upper lines): TCTCATTGGC AGTATTTACC ATGAATAACG ATACCCCAAG CATGATTCAT GATCCATTGA 36574 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCATTGGC AGTATTTACC ATGAATAACG ATACCCCAAG CATGATTCAT GATCCATTGA 60 TTGATTCCAC AGGAGATGGA GGCTATGCAT TGAGTGGAAA AATTATGCTA AGTGCTATTG 36634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGATTCCAC AGGAGATGGA GGCTATGCAT TGAGTGGAAA AATTATGCTA AGTGCTATTG 120 TTATCTTATT CACTGTTGTT GTTTTCATGG TGGGTCTTCA TTTATATGCT CGTTGGTACC 36694 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATCTTATT CACTGTTGTT GTTTTCATGG TGGGTCTTCA TTTATATGCT CGTTGGTACC 180 TTGTGTCTCA GCGCCGCCGT GAACTCCTTC GCCGCCGTAG GGTCAACCAT CGACGGACTC 36754 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTGTCTCA GCGCCGCCGT GAACTCCTTC GCCGCCGTAG GGTCAACCAT CGACGGACTC 240 ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC CGGGGTTTGG 36814 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC CGGGGTTTGG 300 AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT CACCCGGAAC 36874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT CACCCGGAAC 360 CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT CGGGTTTTAC 36934 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT CGGGTTTTAC 420 CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT TCTCATTCTA 36994 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT TCTCATTCTA 480 CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT CGGACCGGAT ATTAACCGGG 37054 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT CGGACCGGAT ATTAACCGGG 540 TTGAGGTGGC GGTAACAGTG AACGAACCGG GTTCGAGTTC GGGTTGTGAG GAGAATAGTA 37114 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGGTGGC GGTAACAGTG AACGAACCGG GTTCGAGTTC GGGTTGTGAG GAGAATAGTA 600 GTCATCATTC TAATATGACG CCGTTGGGTT G 37145 |||||||||| |||||||||| |||||||||| | GTCATCATTC TAATATGACG CCGTTGGGTT G 631 hqPGS_C01HBa0163B20.1+_SGN-E306864+ (36515 37145) ******************************************************************************** EST sequence 19 +strand 659 n (File: SGN-E327140+) 1 ATTGGCAGTA TTTACCATGA ATAACGATAC CCCAAGCATG ATTCATGATC CATTGATTGA 61 TTCCACAGGA GATGGAGGCT ATGCATTGAG TGGAAAAATT ATGCTAAGTG CTATTGTTAT 121 CTTATTCACT GTTGTTGTTT TCATGGTGGG TCTTCATTTA TATGCTCGTT GGTACCTTGT 181 GTCTCAGCGC CGCCGTGAAC TCCTTCGCCG CCGTAGGGTC AACCATCGAC GGACTCATAT 241 TGTTTTCTAC GTTGATAATC CTGGTTCCGG TTTGTCTGAT GCTAACCGGG GTTTGGAACA 301 GGCGGTTCTC AGTTCCTTGC CGGTTTTTGT TTATTCCGAC AAGACTCACC CGGAACCGCT 361 GGAATGTGCT GTTTGTTTAT CGGAATTTGA GGAGAATGAA AAGGGTCGGG TTTTACCCAA 421 GTGTAATCAC TCTTTTCATT CGGAATGTAT TGATATGTGG TTTCATTCTC ATTCTACGTG 481 CCCTCTTTGT CGCTCTCCGG TGGAGGCAGT ACTTATCGGA CCGGATATTA ACCGGGTTGA 541 GGTGGCGGTA ACAGTGAACG AACCGGGTTC GAGTTCGGGT TGTGAGGAGA ATAGTAGTCA 601 TCATTCTAAT ATGACGCCGT TGGGTTGCCG GCGAAAAGGA TTGGATCTGA CCGGAGTAA Predicted gene structure (within gDNA segment 35919 to 37787): Exon 1 36519 37177 ( 659 n); cDNA 1 659 ( 659 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E327140+ 1.000 659 1.000 C PGS_C01HBa0163B20.1+_SGN-E327140+ (36519 37177) Alignment (genomic DNA sequence = upper lines): ATTGGCAGTA TTTACCATGA ATAACGATAC CCCAAGCATG ATTCATGATC CATTGATTGA 36578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGCAGTA TTTACCATGA ATAACGATAC CCCAAGCATG ATTCATGATC CATTGATTGA 60 TTCCACAGGA GATGGAGGCT ATGCATTGAG TGGAAAAATT ATGCTAAGTG CTATTGTTAT 36638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCACAGGA GATGGAGGCT ATGCATTGAG TGGAAAAATT ATGCTAAGTG CTATTGTTAT 120 CTTATTCACT GTTGTTGTTT TCATGGTGGG TCTTCATTTA TATGCTCGTT GGTACCTTGT 36698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATTCACT GTTGTTGTTT TCATGGTGGG TCTTCATTTA TATGCTCGTT GGTACCTTGT 180 GTCTCAGCGC CGCCGTGAAC TCCTTCGCCG CCGTAGGGTC AACCATCGAC GGACTCATAT 36758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTCAGCGC CGCCGTGAAC TCCTTCGCCG CCGTAGGGTC AACCATCGAC GGACTCATAT 240 TGTTTTCTAC GTTGATAATC CTGGTTCCGG TTTGTCTGAT GCTAACCGGG GTTTGGAACA 36818 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTTCTAC GTTGATAATC CTGGTTCCGG TTTGTCTGAT GCTAACCGGG GTTTGGAACA 300 GGCGGTTCTC AGTTCCTTGC CGGTTTTTGT TTATTCCGAC AAGACTCACC CGGAACCGCT 36878 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGGTTCTC AGTTCCTTGC CGGTTTTTGT TTATTCCGAC AAGACTCACC CGGAACCGCT 360 GGAATGTGCT GTTTGTTTAT CGGAATTTGA GGAGAATGAA AAGGGTCGGG TTTTACCCAA 36938 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAATGTGCT GTTTGTTTAT CGGAATTTGA GGAGAATGAA AAGGGTCGGG TTTTACCCAA 420 GTGTAATCAC TCTTTTCATT CGGAATGTAT TGATATGTGG TTTCATTCTC ATTCTACGTG 36998 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTAATCAC TCTTTTCATT CGGAATGTAT TGATATGTGG TTTCATTCTC ATTCTACGTG 480 CCCTCTTTGT CGCTCTCCGG TGGAGGCAGT ACTTATCGGA CCGGATATTA ACCGGGTTGA 37058 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCTTTGT CGCTCTCCGG TGGAGGCAGT ACTTATCGGA CCGGATATTA ACCGGGTTGA 540 GGTGGCGGTA ACAGTGAACG AACCGGGTTC GAGTTCGGGT TGTGAGGAGA ATAGTAGTCA 37118 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGCGGTA ACAGTGAACG AACCGGGTTC GAGTTCGGGT TGTGAGGAGA ATAGTAGTCA 600 TCATTCTAAT ATGACGCCGT TGGGTTGCCG GCGAAAAGGA TTGGATCTGA CCGGAGTAA 37177 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCATTCTAAT ATGACGCCGT TGGGTTGCCG GCGAAAAGGA TTGGATCTGA CCGGAGTAA 659 hqPGS_C01HBa0163B20.1+_SGN-E327140+ (36519 37177) ******************************************************************************** EST sequence 27 +strand 659 n (File: SGN-E303553+) 1 ATCGACGGAC TCATATTGTT TTCTACGTTG ATAATCCTGG TTCCGGTTTG TCTGATGCTA 61 ACCGGGGTTT GGAACAGGCG GTTCTCAGTT CCTTGCCGGT TTTTGTTTAT TCCGACAAGA 121 CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA ATTTGAGGAG AATGAAAAGG 181 GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA ATGTATTGAT ATGTGGTTTC 241 ATTCTCATTC TACGTGCCCT CTTTGTCGCT CTCCGGTGGA GGCAGTACTT ATCGGACCGG 301 ATATTAACCG GGTTGAGGTG GCGGTAACAG TGAACGAACC GGGTTCGAGT TCGGGTTGTG 361 AGGAGAATAG TAGTCATCAT TCTAATATGA CGCCGTTGGG TTGCCGGCGA AAAGGATTGG 421 ATCTGACCGG AGTAAGAATA GAGGTACCAA GAAGGAACGA TTTCGAAGCC GATTTGGAAA 481 TGGGAGTGAG AGTAAGTTCA CCGGCGATTC AATCGAGATC ACCAGCGACT CGTTTAATGT 541 CTTTGAGAAG AATCCTAAGT ATGAACAGAA AAACACCCAC CGGAACTAGC CATTCTCCTA 601 GTGGAAGTTG CGCCGCGGAT TTTGATATAG AAACCGGCGG TAGTAGTGGT GGTGGAAAA Predicted gene structure (within gDNA segment 36143 to 38011): Exon 1 36743 37401 ( 659 n); cDNA 1 659 ( 659 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E303553+ 1.000 659 1.000 C PGS_C01HBa0163B20.1+_SGN-E303553+ (36743 37401) Alignment (genomic DNA sequence = upper lines): ATCGACGGAC TCATATTGTT TTCTACGTTG ATAATCCTGG TTCCGGTTTG TCTGATGCTA 36802 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGACGGAC TCATATTGTT TTCTACGTTG ATAATCCTGG TTCCGGTTTG TCTGATGCTA 60 ACCGGGGTTT GGAACAGGCG GTTCTCAGTT CCTTGCCGGT TTTTGTTTAT TCCGACAAGA 36862 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGGGGTTT GGAACAGGCG GTTCTCAGTT CCTTGCCGGT TTTTGTTTAT TCCGACAAGA 120 CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA ATTTGAGGAG AATGAAAAGG 36922 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA ATTTGAGGAG AATGAAAAGG 180 GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA ATGTATTGAT ATGTGGTTTC 36982 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA ATGTATTGAT ATGTGGTTTC 240 ATTCTCATTC TACGTGCCCT CTTTGTCGCT CTCCGGTGGA GGCAGTACTT ATCGGACCGG 37042 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCTCATTC TACGTGCCCT CTTTGTCGCT CTCCGGTGGA GGCAGTACTT ATCGGACCGG 300 ATATTAACCG GGTTGAGGTG GCGGTAACAG TGAACGAACC GGGTTCGAGT TCGGGTTGTG 37102 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATTAACCG GGTTGAGGTG GCGGTAACAG TGAACGAACC GGGTTCGAGT TCGGGTTGTG 360 AGGAGAATAG TAGTCATCAT TCTAATATGA CGCCGTTGGG TTGCCGGCGA AAAGGATTGG 37162 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGAATAG TAGTCATCAT TCTAATATGA CGCCGTTGGG TTGCCGGCGA AAAGGATTGG 420 ATCTGACCGG AGTAAGAATA GAGGTACCAA GAAGGAACGA TTTCGAAGCC GATTTGGAAA 37222 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTGACCGG AGTAAGAATA GAGGTACCAA GAAGGAACGA TTTCGAAGCC GATTTGGAAA 480 TGGGAGTGAG AGTAAGTTCA CCGGCGATTC AATCGAGATC ACCAGCGACT CGTTTAATGT 37282 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGAGTGAG AGTAAGTTCA CCGGCGATTC AATCGAGATC ACCAGCGACT CGTTTAATGT 540 CTTTGAGAAG AATCCTAAGT ATGAACAGAA AAACACCCAC CGGAACTAGC CATTCTCCTA 37342 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGAGAAG AATCCTAAGT ATGAACAGAA AAACACCCAC CGGAACTAGC CATTCTCCTA 600 GTGGAAGTTG CGCCGCGGAT TTTGATATAG AAACCGGCGG TAGTAGTGGT GGTGGAAAA 37401 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GTGGAAGTTG CGCCGCGGAT TTTGATATAG AAACCGGCGG TAGTAGTGGT GGTGGAAAA 659 hqPGS_C01HBa0163B20.1+_SGN-E303553+ (36743 37401) ******************************************************************************** EST sequence 16 +strand 678 n (File: SGN-E371657+) 1 CGACGGACTC ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC 61 CGGGGTTTGG AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT 121 CACCCGGAAC CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT 181 CGGGTTTTAC CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT 241 TCTCATTCTA CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT CGGACCGGAT 301 ATTAACCGGG TTGAGGTGGC GGTAACAGTG AACGAACCGG GTTCGAGTTC GGGTTGTGAG 361 GAGAATAGTA GTCATCATTC TAATATGACG CCGTTGGGTT GCCGGCGAAA AGGATTGGAT 421 CTGACCGGAG TAAGAATAGA GGTACCAAGA AGGAACGATT TCGAAGCCGA TTTGGAAATG 481 GGAGTGAGAG TAAGTTCACC GGCGATTCAA TCGAGATCAC CAGCGACTCG TTTAATGTCT 541 TTGAGAAGAA TCCTAAGTAT GAACAGAAAA ACACCCACCG GAACTAGCCA TTCTCCTAGT 601 GGAAGTTGCG CCGCGGATTT TGATATAGAA ACCGGCGGTA GTAGTGGTGG TGGAAAAATT 661 CAAGTCGGCG GCGAACGC Predicted gene structure (within gDNA segment 36145 to 38032): Exon 1 36745 37422 ( 678 n); cDNA 1 678 ( 678 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E371657+ 1.000 678 1.000 C PGS_C01HBa0163B20.1+_SGN-E371657+ (36745 37422) Alignment (genomic DNA sequence = upper lines): CGACGGACTC ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC 36804 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACGGACTC ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC 60 CGGGGTTTGG AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT 36864 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGGGTTTGG AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT 120 CACCCGGAAC CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT 36924 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCCGGAAC CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT 180 CGGGTTTTAC CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT 36984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGGTTTTAC CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT 240 TCTCATTCTA CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT CGGACCGGAT 37044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCATTCTA CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT CGGACCGGAT 300 ATTAACCGGG TTGAGGTGGC GGTAACAGTG AACGAACCGG GTTCGAGTTC GGGTTGTGAG 37104 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAACCGGG TTGAGGTGGC GGTAACAGTG AACGAACCGG GTTCGAGTTC GGGTTGTGAG 360 GAGAATAGTA GTCATCATTC TAATATGACG CCGTTGGGTT GCCGGCGAAA AGGATTGGAT 37164 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAATAGTA GTCATCATTC TAATATGACG CCGTTGGGTT GCCGGCGAAA AGGATTGGAT 420 CTGACCGGAG TAAGAATAGA GGTACCAAGA AGGAACGATT TCGAAGCCGA TTTGGAAATG 37224 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGACCGGAG TAAGAATAGA GGTACCAAGA AGGAACGATT TCGAAGCCGA TTTGGAAATG 480 GGAGTGAGAG TAAGTTCACC GGCGATTCAA TCGAGATCAC CAGCGACTCG TTTAATGTCT 37284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGTGAGAG TAAGTTCACC GGCGATTCAA TCGAGATCAC CAGCGACTCG TTTAATGTCT 540 TTGAGAAGAA TCCTAAGTAT GAACAGAAAA ACACCCACCG GAACTAGCCA TTCTCCTAGT 37344 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGAAGAA TCCTAAGTAT GAACAGAAAA ACACCCACCG GAACTAGCCA TTCTCCTAGT 600 GGAAGTTGCG CCGCGGATTT TGATATAGAA ACCGGCGGTA GTAGTGGTGG TGGAAAAATT 37404 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAGTTGCG CCGCGGATTT TGATATAGAA ACCGGCGGTA GTAGTGGTGG TGGAAAAATT 660 CAAGTCGGCG GCGAACGC 37422 |||||||||| |||||||| CAAGTCGGCG GCGAACGC 678 hqPGS_C01HBa0163B20.1+_SGN-E371657+ (36745 37422) ******************************************************************************** EST sequence 20 +strand 339 n (File: SGN-E280286+) 1 CGACGGACTC ATATTGTTTT CTACGTTGTT AATCCTGGAT CCGGTTTGTC TGATGCTAAC 61 CGGGGTTTGG AACAGGCGGT TCTCAGTTCC TTGCCGGGTT TTGTTTATTC CGACAAGACT 121 CACCCGGAAC CGCTGGAATG AGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT 181 CGGGTTTTAC CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGATTCAT 241 TCTCATTCTA CGTGCCCTCT TTGTCGCTCT CCGGCGGAGG CAGTACTTAT CTGGACCGGA 301 TATTAACCGG GTTGAGGTGG CGGTAACAGT GAACGAACC Predicted gene structure (within gDNA segment 36145 to 37692): Exon 1 36745 37082 ( 338 n); cDNA 1 339 ( 339 n); score: 0.975 MATCH C01HBa0163B20.1+ SGN-E280286+ 0.975 338 0.997 C PGS_C01HBa0163B20.1+_SGN-E280286+ (36745 37082) Alignment (genomic DNA sequence = upper lines): CGACGGACTC ATATTGTTTT CTACGTTGAT AATCCTGGTT CCGGTTTGTC TGATGCTAAC 36804 |||||||||| |||||||||| |||||||| | |||||||| | |||||||||| |||||||||| CGACGGACTC ATATTGTTTT CTACGTTGTT AATCCTGGAT CCGGTTTGTC TGATGCTAAC 60 CGGGGTTTGG AACAGGCGGT TCTCAGTTCC TTGCCGGTTT TTGTTTATTC CGACAAGACT 36864 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CGGGGTTTGG AACAGGCGGT TCTCAGTTCC TTGCCGGGTT TTGTTTATTC CGACAAGACT 120 CACCCGGAAC CGCTGGAATG TGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT 36924 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CACCCGGAAC CGCTGGAATG AGCTGTTTGT TTATCGGAAT TTGAGGAGAA TGAAAAGGGT 180 CGGGTTTTAC CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGTTTCAT 36984 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| CGGGTTTTAC CCAAGTGTAA TCACTCTTTT CATTCGGAAT GTATTGATAT GTGGATTCAT 240 TCTCATTCTA CGTGCCCTCT TTGTCGCTCT CCGGTGGAGG CAGTACTTAT C-GGACCGGA 37043 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| | |||||||| TCTCATTCTA CGTGCCCTCT TTGTCGCTCT CCGGCGGAGG CAGTACTTAT CTGGACCGGA 300 TATTAACCGG GTTGAGGTGG CGGTAACAGT GAACGAACC 37082 |||||||||| |||||||||| |||||||||| ||||||||| TATTAACCGG GTTGAGGTGG CGGTAACAGT GAACGAACC 339 hqPGS_C01HBa0163B20.1+_SGN-E280286+ (36745 37082) ******************************************************************************** EST sequence 23 +strand 588 n (File: SGN-E338632+) 1 TAACCGGGGT TTGGAACAGG CGGTTCTCAG TTCCTTGCCG GTTTTTGTTT ATTCCGACAA 61 GACTCACCCG GAACCGCTGG AATGTGCTGT TTGTTTATCG GAATTTGAGG AGAATGAAAA 121 GGGTCGGGTT TTACCCAAGT GTAATCACTC TTTTCATTCG GAATGTATTG ATATGTGGTT 181 TCATTCTCAT TCTACGTGCC CTCTTTGTCG CTCTCCGGTG GAGGCAGTAC TTATCGGACC 241 GGATATTAAC CGGGTTGAGG TGGCGGTAAC AGTGAACGAA CCGGGTTCGA GTTCGGGTTG 301 TGAGGAGAAT AGTAGTCATC ATTCTAATAT GACGCCGTTG GGTTGCCGGC GAAAAGGATT 361 GGATCTGACC GGAGTAAGAA TAGAGGTACC AAGAAGGAAC GATTTCGAAG CCGATTTGGA 421 AATGGGAGTG AGAGTAAGTT CACCGGCGAT TCAATCGAGA TCACCAGCGA CTCGTTTAAT 481 GTCTTTGAGA AGAATCCTAA GTATGAACAG AAAAACACCC ACCGGAACTA GCCATTCTCC 541 TAGTGGAAGT TGCGCCGCGG ATTTTGATAT AGAAACCGGC GGTAGTAG Predicted gene structure (within gDNA segment 36201 to 37998): Exon 1 36801 37388 ( 588 n); cDNA 1 588 ( 588 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E338632+ 1.000 588 1.000 C PGS_C01HBa0163B20.1+_SGN-E338632+ (36801 37388) Alignment (genomic DNA sequence = upper lines): TAACCGGGGT TTGGAACAGG CGGTTCTCAG TTCCTTGCCG GTTTTTGTTT ATTCCGACAA 36860 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCGGGGT TTGGAACAGG CGGTTCTCAG TTCCTTGCCG GTTTTTGTTT ATTCCGACAA 60 GACTCACCCG GAACCGCTGG AATGTGCTGT TTGTTTATCG GAATTTGAGG AGAATGAAAA 36920 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTCACCCG GAACCGCTGG AATGTGCTGT TTGTTTATCG GAATTTGAGG AGAATGAAAA 120 GGGTCGGGTT TTACCCAAGT GTAATCACTC TTTTCATTCG GAATGTATTG ATATGTGGTT 36980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTCGGGTT TTACCCAAGT GTAATCACTC TTTTCATTCG GAATGTATTG ATATGTGGTT 180 TCATTCTCAT TCTACGTGCC CTCTTTGTCG CTCTCCGGTG GAGGCAGTAC TTATCGGACC 37040 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATTCTCAT TCTACGTGCC CTCTTTGTCG CTCTCCGGTG GAGGCAGTAC TTATCGGACC 240 GGATATTAAC CGGGTTGAGG TGGCGGTAAC AGTGAACGAA CCGGGTTCGA GTTCGGGTTG 37100 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATATTAAC CGGGTTGAGG TGGCGGTAAC AGTGAACGAA CCGGGTTCGA GTTCGGGTTG 300 TGAGGAGAAT AGTAGTCATC ATTCTAATAT GACGCCGTTG GGTTGCCGGC GAAAAGGATT 37160 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGAGAAT AGTAGTCATC ATTCTAATAT GACGCCGTTG GGTTGCCGGC GAAAAGGATT 360 GGATCTGACC GGAGTAAGAA TAGAGGTACC AAGAAGGAAC GATTTCGAAG CCGATTTGGA 37220 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATCTGACC GGAGTAAGAA TAGAGGTACC AAGAAGGAAC GATTTCGAAG CCGATTTGGA 420 AATGGGAGTG AGAGTAAGTT CACCGGCGAT TCAATCGAGA TCACCAGCGA CTCGTTTAAT 37280 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGGAGTG AGAGTAAGTT CACCGGCGAT TCAATCGAGA TCACCAGCGA CTCGTTTAAT 480 GTCTTTGAGA AGAATCCTAA GTATGAACAG AAAAACACCC ACCGGAACTA GCCATTCTCC 37340 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCTTTGAGA AGAATCCTAA GTATGAACAG AAAAACACCC ACCGGAACTA GCCATTCTCC 540 TAGTGGAAGT TGCGCCGCGG ATTTTGATAT AGAAACCGGC GGTAGTAG 37388 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TAGTGGAAGT TGCGCCGCGG ATTTTGATAT AGAAACCGGC GGTAGTAG 588 hqPGS_C01HBa0163B20.1+_SGN-E338632+ (36801 37388) ******************************************************************************** EST sequence 150 +strand 321 n (File: SGN-E247205+) 1 TTTTGTTTAT TCCGACAAGA CTCACCCGGA ACCGCTGGAG TGTGCTGTTT GTTTATCGGA 61 ATTTGAGGAG AATGAAAAGG GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA 121 ATGTATTGAT ATGTGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT CTCCGGTGGA 181 GGCAGTACTT ATCGGACCGG ATATTAACCG GGTTGAGGTG GCGGTAACAG TGAACGAACC 241 GGGTTCGAGT TCGGGTTGTG AGGAGAATAG TATTCATCAT TCTAATATGA CGCCGTTGGG 301 TTGCCGGCGA AAAGGATTGG A Predicted gene structure (within gDNA segment 36243 to 37773): Exon 1 36843 37163 ( 321 n); cDNA 1 321 ( 321 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E247205+ 0.994 321 1.000 C PGS_C01HBa0163B20.1+_SGN-E247205+ (36843 37163) Alignment (genomic DNA sequence = upper lines): TTTTGTTTAT TCCGACAAGA CTCACCCGGA ACCGCTGGAA TGTGCTGTTT GTTTATCGGA 36902 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TTTTGTTTAT TCCGACAAGA CTCACCCGGA ACCGCTGGAG TGTGCTGTTT GTTTATCGGA 60 ATTTGAGGAG AATGAAAAGG GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA 36962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGAGGAG AATGAAAAGG GTCGGGTTTT ACCCAAGTGT AATCACTCTT TTCATTCGGA 120 ATGTATTGAT ATGTGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT CTCCGGTGGA 37022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTATTGAT ATGTGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT CTCCGGTGGA 180 GGCAGTACTT ATCGGACCGG ATATTAACCG GGTTGAGGTG GCGGTAACAG TGAACGAACC 37082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGTACTT ATCGGACCGG ATATTAACCG GGTTGAGGTG GCGGTAACAG TGAACGAACC 240 GGGTTCGAGT TCGGGTTGTG AGGAGAATAG TAGTCATCAT TCTAATATGA CGCCGTTGGG 37142 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| GGGTTCGAGT TCGGGTTGTG AGGAGAATAG TATTCATCAT TCTAATATGA CGCCGTTGGG 300 TTGCCGGCGA AAAGGATTGG A 37163 |||||||||| |||||||||| | TTGCCGGCGA AAAGGATTGG A 321 hqPGS_C01HBa0163B20.1+_SGN-E247205+ (36843 37163) ******************************************************************************** EST sequence 218 -strand 777 n (File: SGN-E371656-) 1 TTTCATTCGG AATGTATTGA TATGGGTTTC ATTCTCATTC TACGTGCCCT CTTTGTCGCT 61 CTCCGGTGGA GGCAGTACTT ATCGGACCGG ATATTAACCG GGTTGAGGTG GCGGTAACAG 121 TGAACGAACC GGGTTCGAGT TCGGGTTGTG AGGAGAATAG TAGTCATCAT TCTAATATGA 181 CGCCGTTGGG TTGCCGGCGA AAAGGATTGG ATCTGACCGG AGTAAGAATA GAGGTACCAA 241 GAAGGAACGA TTTCGAAGCC GATTTGGAAA TGGGAGTGAG AGTAAGTTCA CCGGCGATTC 301 AATCGAGATC ACCAGCGACT CGTTTAATGT CTTTGAGAAG AATCCTAAGT ATGAACAGAA 361 AAACACCCAC CGGAACTAGC CATTCTCCTA GTGGAAGTTG CGCCGCGGAT TTTGATATAG 421 AAACCGGCGG TAGTAGTGGT GGTGGAAAAA TTCAAGTCGG CGGCGAACGC ATCACAACTC 481 CGTGAGTTAA AAATGCGGGC ACACATCCCT AGGCAAAAGC TGAAAAATAT TGAGTCACGC 541 CGATTGCGTG AAAACAGGAG AAACAGTGAC TTGACTGACA GAAAAGTCCT ATGACACGTG 601 GCAATTGCTG AGTGATTCAC CTTTTACAAG GCAGTCATAG TAGACTTTGA GGGGGGAATG 661 TTTGACTTGT AAATTAATGG TAGGATTAGA AAAATGCAAA GTTGTAAAGC GTTACGTGCA 721 AGAGTCAATT ACAATGTGTC TATTCTAAAA AAAAAAAAAA AAACAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 36342 to 38581): Exon 1 36952 37700 ( 749 n); cDNA 1 748 ( 748 n); score: 0.999 PPA cDNA 749 777 MATCH C01HBa0163B20.1+ SGN-E371656- 0.999 749 0.964 C PGS_C01HBa0163B20.1+_SGN-E371656- (36952 37700) Alignment (genomic DNA sequence = upper lines): TTTCATTCGG AATGTATTGA TATGTGGTTT CATTCTCATT CTACGTGCCC TCTTTGTCGC 37011 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TTTCATTCGG AATGTATTGA TATG-GGTTT CATTCTCATT CTACGTGCCC TCTTTGTCGC 59 TCTCCGGTGG AGGCAGTACT TATCGGACCG GATATTAACC GGGTTGAGGT GGCGGTAACA 37071 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCCGGTGG AGGCAGTACT TATCGGACCG GATATTAACC GGGTTGAGGT GGCGGTAACA 119 GTGAACGAAC CGGGTTCGAG TTCGGGTTGT GAGGAGAATA GTAGTCATCA TTCTAATATG 37131 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGAACGAAC CGGGTTCGAG TTCGGGTTGT GAGGAGAATA GTAGTCATCA TTCTAATATG 179 ACGCCGTTGG GTTGCCGGCG AAAAGGATTG GATCTGACCG GAGTAAGAAT AGAGGTACCA 37191 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGCCGTTGG GTTGCCGGCG AAAAGGATTG GATCTGACCG GAGTAAGAAT AGAGGTACCA 239 AGAAGGAACG ATTTCGAAGC CGATTTGGAA ATGGGAGTGA GAGTAAGTTC ACCGGCGATT 37251 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGAACG ATTTCGAAGC CGATTTGGAA ATGGGAGTGA GAGTAAGTTC ACCGGCGATT 299 CAATCGAGAT CACCAGCGAC TCGTTTAATG TCTTTGAGAA GAATCCTAAG TATGAACAGA 37311 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATCGAGAT CACCAGCGAC TCGTTTAATG TCTTTGAGAA GAATCCTAAG TATGAACAGA 359 AAAACACCCA CCGGAACTAG CCATTCTCCT AGTGGAAGTT GCGCCGCGGA TTTTGATATA 37371 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACACCCA CCGGAACTAG CCATTCTCCT AGTGGAAGTT GCGCCGCGGA TTTTGATATA 419 GAAACCGGCG GTAGTAGTGG TGGTGGAAAA ATTCAAGTCG GCGGCGAACG CATCACAACT 37431 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAACCGGCG GTAGTAGTGG TGGTGGAAAA ATTCAAGTCG GCGGCGAACG CATCACAACT 479 CCGTGAGTTA AAAATGCGGG CACACATCCC TAGGCAAAAG CTGAAAAATA TTGAGTCACG 37491 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTGAGTTA AAAATGCGGG CACACATCCC TAGGCAAAAG CTGAAAAATA TTGAGTCACG 539 CCGATTGCGT GAAAACAGGA GAAACAGTGA CTTGACTGAC AGAAAAGTCC TATGACACGT 37551 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGATTGCGT GAAAACAGGA GAAACAGTGA CTTGACTGAC AGAAAAGTCC TATGACACGT 599 GGCAATTGCT GAGTGATTCA CCTTTTACAA GGCAGTCATA GTAGACTTTG AGGGGGGAAT 37611 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAATTGCT GAGTGATTCA CCTTTTACAA GGCAGTCATA GTAGACTTTG AGGGGGGAAT 659 GTTTGACTTG TAAATTAATG GTAGGATTAG AAAAATGCAA AGTTGTAAAG CGTTACGTGC 37671 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGACTTG TAAATTAATG GTAGGATTAG AAAAATGCAA AGTTGTAAAG CGTTACGTGC 719 AAGAGTCAAT TACAATGTGT CTATTCTAA 37700 |||||||||| |||||||||| ||||||||| AAGAGTCAAT TACAATGTGT CTATTCTAA 748 hqPGS_C01HBa0163B20.1+_SGN-E371656- (36952 37700) ******************************************************************************** EST sequence 263 -strand 528 n (File: SGN-E290438-) 1 AAAGGATTGG ATCTGACCGG AGTAAGAATA GAGGTACCAA GAAGTAACGA TTTCGAAGCC 61 GATTTGGAAA TGGGAGTGAG AGTAAGTTCA CCGGCGATTC AATCGAGATC ACCAGCGACT 121 CGTTTAATGT CTTTGAGAAG AATCCTAAGT ATGAACAGAA AAACACCCAC CGGAACTAGC 181 CATTCTCCTA GTGGAAGTTG CGCCGCGGAT TTTGATATAG AAACCGGCGG TAGTAGTGGT 241 GGTGGAAAAA TTCAAGTCGG CGGCGAACGC ATCACAACTC CGTGAGTTAA AAATGCGGGC 301 ACACATCCCT AGGCAAAAGC TGAAAAATAT TGAGTCACGC CGATTGCGTG AAAACAGGAG 361 AAACAGTGAC TTGACTGACA GAAAAGTCCT ATGACACGTG GCAATTGCTG AGTGATTCAC 421 CTTTTACAAG GCAGTCATAG TAGACTTTGA GGGGGGAATG TTTGACTTGT AAATTAATGG 481 TAGGATTAGA AAAATGCAAA GTTGTAAAGC GTTACGTGCA AGAGTCAA Predicted gene structure (within gDNA segment 36543 to 38280): Exon 1 37153 37680 ( 528 n); cDNA 1 528 ( 528 n); score: 0.998 MATCH C01HBa0163B20.1+ SGN-E290438- 0.998 528 1.000 C PGS_C01HBa0163B20.1+_SGN-E290438- (37153 37680) Alignment (genomic DNA sequence = upper lines): AAAGGATTGG ATCTGACCGG AGTAAGAATA GAGGTACCAA GAAGGAACGA TTTCGAAGCC 37212 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| AAAGGATTGG ATCTGACCGG AGTAAGAATA GAGGTACCAA GAAGTAACGA TTTCGAAGCC 60 GATTTGGAAA TGGGAGTGAG AGTAAGTTCA CCGGCGATTC AATCGAGATC ACCAGCGACT 37272 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTTGGAAA TGGGAGTGAG AGTAAGTTCA CCGGCGATTC AATCGAGATC ACCAGCGACT 120 CGTTTAATGT CTTTGAGAAG AATCCTAAGT ATGAACAGAA AAACACCCAC CGGAACTAGC 37332 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTTAATGT CTTTGAGAAG AATCCTAAGT ATGAACAGAA AAACACCCAC CGGAACTAGC 180 CATTCTCCTA GTGGAAGTTG CGCCGCGGAT TTTGATATAG AAACCGGCGG TAGTAGTGGT 37392 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTCTCCTA GTGGAAGTTG CGCCGCGGAT TTTGATATAG AAACCGGCGG TAGTAGTGGT 240 GGTGGAAAAA TTCAAGTCGG CGGCGAACGC ATCACAACTC CGTGAGTTAA AAATGCGGGC 37452 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGAAAAA TTCAAGTCGG CGGCGAACGC ATCACAACTC CGTGAGTTAA AAATGCGGGC 300 ACACATCCCT AGGCAAAAGC TGAAAAATAT TGAGTCACGC CGATTGCGTG AAAACAGGAG 37512 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACATCCCT AGGCAAAAGC TGAAAAATAT TGAGTCACGC CGATTGCGTG AAAACAGGAG 360 AAACAGTGAC TTGACTGACA GAAAAGTCCT ATGACACGTG GCAATTGCTG AGTGATTCAC 37572 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACAGTGAC TTGACTGACA GAAAAGTCCT ATGACACGTG GCAATTGCTG AGTGATTCAC 420 CTTTTACAAG GCAGTCATAG TAGACTTTGA GGGGGGAATG TTTGACTTGT AAATTAATGG 37632 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTTACAAG GCAGTCATAG TAGACTTTGA GGGGGGAATG TTTGACTTGT AAATTAATGG 480 TAGGATTAGA AAAATGCAAA GTTGTAAAGC GTTACGTGCA AGAGTCAA 37680 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| TAGGATTAGA AAAATGCAAA GTTGTAAAGC GTTACGTGCA AGAGTCAA 528 hqPGS_C01HBa0163B20.1+_SGN-E290438- (37153 37680) ******************************************************************************** EST sequence 22 +strand 752 n (File: SGN-E213530+) 1 AAGGTATGAA TTTTCTCTTT CCTGTTCCAT CTCAAAAAGA AAATCTCTTT CCTGTAGATC 61 AAAATATTTG TGTCTTTTTG TCAAAATGTT AAAAATATTT GAGTGTTAAT TCTGTTCAAT 121 TACACCCAAG GTTGTGGCCT AGTGGTCAAT CAAGTCGGTT GAGAACCATG AGGTCTCTAG 181 TTCAAATCAC CGTAGAGACG AAAGAAGAAC ACTAGGTGAT TTCTTCACAT CTGTTCTAGC 241 CTGAACATCC TTAGTGGACA GTGTAATGAG AGGTGGGCAG GTATCCCGTG GAATTAGCTG 301 AGGTTTGAAA GCGGGCCTTG ACACCAATAT ATCAAAAAAT ATAAAGGGAA ACTTACATAA 361 ATATACTATA TTAAAAAAAT ATTTACCATT TATAGCAATA ACATTTGTTT TTACTTGATC 421 ACTTTTAATA CATTATAATA AAGTTCTAAT ACATATTACG GGGAACAATT TATTATTCAC 481 ATATAAAATT GATGAATAAT ACATTTATCA CTCATTTTAA TACACTTGTA ACACAATGTG 541 TCATTTCTTA CCAAACAAGC ATAATATATT TTTAAAAAAA GTCATAATAC ATATATATTG 601 CATACATATT CACTGTAAAT GCATATTGCA GATTTAACAT AGTATTGCTA TGTATTGNTA 661 CNAAATGGTA ATAAATAAAA AGTATCGCTA AAATCAGTAA TTATTTATTA AAATGTATTC 721 ATCCAAGTAA TTTCCCCCCA CCCCCCCCCC CC Predicted gene structure (within gDNA segment 33768 to 39985): Exon 1 34482 34500 ( 19 n); cDNA 327 345 ( 19 n); score: 0.737 Intron 1 34501 38651 (4151 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.94) Exon 2 38652 38989 ( 338 n); cDNA 346 671 ( 326 n); score: 0.808 MATCH C01HBa0163B20.1+ SGN-E213530+ 0.808 357 0.475 C PGS_C01HBa0163B20.1+_SGN-E213530+ (34482 34500,38652 38989) Alignment (genomic DNA sequence = upper lines): ATGCACCAAT AAATTTAAAA GAAAACTAAA GAAATAATGC TCTAGCTGAA TTTAAACTCT 34541 || | ||| |||| |||| ATATATCAAA AAATATAAA. .......... .......... .......... .......... 345 AGTCTCTAAA GACTTTAGAT GCACCAACAA ATTTAAAAGA AAACTAAAGA AATAATGCTC 34601 .......... .......... .......... .......... .......... .......... 345 TAGCTGAATT TAAACTCTAG TCTCGCGAAT GATTTCTCTA GCTTGTACCA ACAATACAAG 34661 .......... .......... .......... .......... .......... .......... 345 GACACTCCTA TATAACTATA CTCATCATGT GTGCACTGTT AATTATATCA CAATTGTTGT 34721 .......... .......... .......... .......... .......... .......... 345 TATTTCTTAA GATAGATACA TACATATACA TATGGTTTTC AAAGTTAACC GGTGCACGAG 34781 .......... .......... .......... .......... .......... .......... 345 AATCAACACA TTAAATATAG ATCCGCCTCT CATTAAAAGT TAGGGTTATT AGTCTTTAGT 34841 .......... .......... .......... .......... .......... .......... 345 TTGTTGAGTT GTTCCAAAAT TATTATTGAA TTGTAATAAA TTTCTAGATA TAAAAGAGTA 34901 .......... .......... .......... .......... .......... .......... 345 GTTGTGTGGA TGAATTTGTA ATAAAAATGA ATTTAATTTC TTGAAAAAGT AACTAGAACA 34961 .......... .......... .......... .......... .......... .......... 345 GATTAAGTGA ACCTTTAGTC AAGGTACTTT AATGAATCCC ACGGACTAGT AAGTTGTAAT 35021 .......... .......... .......... .......... .......... .......... 345 TTGAAATTTT GATCTAGAGA AGTCAGCAAA AATTGGTGGT TGAAATTCTA TATTGTATAA 35081 .......... .......... .......... .......... .......... .......... 345 TTAATGCAAT ATAAAAGTAT TAGAAAATAA CGATTATTTT AAAAGTAACA AGTAAACTCA 35141 .......... .......... .......... .......... .......... .......... 345 CAAATTTGTT ATTAATATAG TGAACGAAAC AAATAGGCAT AATAAAGAAA GTATAAATGG 35201 .......... .......... .......... .......... .......... .......... 345 AGAGAGTATA TAAGTTGTTA TTGTTGTGAT AAATGGATAA ATACATTTAC AGGAAGACGT 35261 .......... .......... .......... .......... .......... .......... 345 TATTAATGGT GTTTGAATTA TGTAACGCAA CTTTACACGG AAAACTTGAC TACTTACTCC 35321 .......... .......... .......... .......... .......... .......... 345 TCAATCAATT CAACCAACCT AACTAACCTT CTTCATGTCC AAACATTCCA CGATTTATGA 35381 .......... .......... .......... .......... .......... .......... 345 TAAAATAGAT CAAACTATTT CTCTCTTAAA TAGATATCTT AAGTTCAAGT TCGAAATTTA 35441 .......... .......... .......... .......... .......... .......... 345 AAATAATCAA ATTTCAAGCG AATCTCCAAT TCCAATTAAT AAGAAAAAAG ACATTAAGTA 35501 .......... .......... .......... .......... .......... .......... 345 GGTGTTTGAC CATGTGATAT CATATCACGA TATGATATTG TGAGATGGAA TCAGTGTTAC 35561 .......... .......... .......... .......... .......... .......... 345 GATATGCGAT TTTGTGCTGA TTCCAGATGT GACACTGTAT TCTCCAAAAA TTATGAAGTG 35621 .......... .......... .......... .......... .......... .......... 345 GGGTCATATA GAAATACCAT ATCATGATTT AAGTTATTTT AATACAAAAA TTGATTCACG 35681 .......... .......... .......... .......... .......... .......... 345 GGTTTATATT CGATTAAAAT AACCTCACAT TTATATCTAT TAACAATTTA TTTCACATGT 35741 .......... .......... .......... .......... .......... .......... 345 AATAATAAAA TTTATAATCA CATCATTACT CTTAAAATTT ATTAAACTCA CGGATATAAA 35801 .......... .......... .......... .......... .......... .......... 345 ATTTATTATT CTCACGAACA TATAGTCACT TTCACTCACA TTTTATGATT GTTGAGTAAT 35861 .......... .......... .......... .......... .......... .......... 345 AAAATCTAGA AGAGCCCGTG AAAGGTATTT CATTTTTACT CAAAATATAT TGATGAAATA 35921 .......... .......... .......... .......... .......... .......... 345 ATTACTTATG TTGAGAATAA ATAACTTTGT AATAATTTAT TATACGATTT TATAATTATT 35981 .......... .......... .......... .......... .......... .......... 345 TAATAATATT GAATAAATTA AAGGAGCAAT TTTAATAGTT TATTACTTAT TAGATTTTTA 36041 .......... .......... .......... .......... .......... .......... 345 TGTTCATGAG AAAATATACA ATATCAAAAT TTTATATCGC GTATACAACT AAAACTTCAA 36101 .......... .......... .......... .......... .......... .......... 345 TTTCATCTCA TAATTTCATA TCATGATACC AAAATTTTAT ATCGCGTATA CAAATAAAAC 36161 .......... .......... .......... .......... .......... .......... 345 TTTAATTTCA TCTCATAATT CCATATCATG ATACCATCTG GCATAGCCAA ACGGGCTCTA 36221 .......... .......... .......... .......... .......... .......... 345 AAGAGATTCA GGCGGGAAAG GGTGTTTGTG TCATTTGCTA ATCCCGCGTC AACTTTGGCG 36281 .......... .......... .......... .......... .......... .......... 345 TCTTCCATCA CATTACACTC TCTTACTAAA ACCATCATAC CTAAACTTCT CCCTTTTCCC 36341 .......... .......... .......... .......... .......... .......... 345 ACCGAAACCA TCAAGAACTT TCCTCCTTCT CTCTTCTTCC TTCAACTTGC CCATTTCCCC 36401 .......... .......... .......... .......... .......... .......... 345 ATCCATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT 36461 .......... .......... .......... .......... .......... .......... 345 ATATATATAT CTTCTACAAT AATTTTGCTA TATTTACAAT TACAGATAGT CCATCTCATT 36521 .......... .......... .......... .......... .......... .......... 345 GGCAGTATTT ACCATGAATA ACGATACCCC AAGCATGATT CATGATCCAT TGATTGATTC 36581 .......... .......... .......... .......... .......... .......... 345 CACAGGAGAT GGAGGCTATG CATTGAGTGG AAAAATTATG CTAAGTGCTA TTGTTATCTT 36641 .......... .......... .......... .......... .......... .......... 345 ATTCACTGTT GTTGTTTTCA TGGTGGGTCT TCATTTATAT GCTCGTTGGT ACCTTGTGTC 36701 .......... .......... .......... .......... .......... .......... 345 TCAGCGCCGC CGTGAACTCC TTCGCCGCCG TAGGGTCAAC CATCGACGGA CTCATATTGT 36761 .......... .......... .......... .......... .......... .......... 345 TTTCTACGTT GATAATCCTG GTTCCGGTTT GTCTGATGCT AACCGGGGTT TGGAACAGGC 36821 .......... .......... .......... .......... .......... .......... 345 GGTTCTCAGT TCCTTGCCGG TTTTTGTTTA TTCCGACAAG ACTCACCCGG AACCGCTGGA 36881 .......... .......... .......... .......... .......... .......... 345 ATGTGCTGTT TGTTTATCGG AATTTGAGGA GAATGAAAAG GGTCGGGTTT TACCCAAGTG 36941 .......... .......... .......... .......... .......... .......... 345 TAATCACTCT TTTCATTCGG AATGTATTGA TATGTGGTTT CATTCTCATT CTACGTGCCC 37001 .......... .......... .......... .......... .......... .......... 345 TCTTTGTCGC TCTCCGGTGG AGGCAGTACT TATCGGACCG GATATTAACC GGGTTGAGGT 37061 .......... .......... .......... .......... .......... .......... 345 GGCGGTAACA GTGAACGAAC CGGGTTCGAG TTCGGGTTGT GAGGAGAATA GTAGTCATCA 37121 .......... .......... .......... .......... .......... .......... 345 TTCTAATATG ACGCCGTTGG GTTGCCGGCG AAAAGGATTG GATCTGACCG GAGTAAGAAT 37181 .......... .......... .......... .......... .......... .......... 345 AGAGGTACCA AGAAGGAACG ATTTCGAAGC CGATTTGGAA ATGGGAGTGA GAGTAAGTTC 37241 .......... .......... .......... .......... .......... .......... 345 ACCGGCGATT CAATCGAGAT CACCAGCGAC TCGTTTAATG TCTTTGAGAA GAATCCTAAG 37301 .......... .......... .......... .......... .......... .......... 345 TATGAACAGA AAAACACCCA CCGGAACTAG CCATTCTCCT AGTGGAAGTT GCGCCGCGGA 37361 .......... .......... .......... .......... .......... .......... 345 TTTTGATATA GAAACCGGCG GTAGTAGTGG TGGTGGAAAA ATTCAAGTCG GCGGCGAACG 37421 .......... .......... .......... .......... .......... .......... 345 CATCACAACT CCGTGAGTTA AAAATGCGGG CACACATCCC TAGGCAAAAG CTGAAAAATA 37481 .......... .......... .......... .......... .......... .......... 345 TTGAGTCACG CCGATTGCGT GAAAACAGGA GAAACAGTGA CTTGACTGAC AGAAAAGTCC 37541 .......... .......... .......... .......... .......... .......... 345 TATGACACGT GGCAATTGCT GAGTGATTCA CCTTTTACAA GGCAGTCATA GTAGACTTTG 37601 .......... .......... .......... .......... .......... .......... 345 AGGGGGGAAT GTTTGACTTG TAAATTAATG GTAGGATTAG AAAAATGCAA AGTTGTAAAG 37661 .......... .......... .......... .......... .......... .......... 345 CGTTACGTGC AAGAGTCAAT TACAATGTGT CTATTCTAAA TTCGTTGAAT TTTTTTTCCC 37721 .......... .......... .......... .......... .......... .......... 345 TATTATAAAG TATTTGATAA ACGTTGGTTC CTAATTTATG ACTCGTGTAG TTGGTAAGTG 37781 .......... .......... .......... .......... .......... .......... 345 GAATAGTTCA ATCATGTTAA AGTATTACAG TCCAATTTGC AATATCATTA TTTGGAACTT 37841 .......... .......... .......... .......... .......... .......... 345 GTTACACAAA ATTTATATAT ATATATATAT ATATATATAT ATAAAATTTA TTGTTAAGAA 37901 .......... .......... .......... .......... .......... .......... 345 ATATAATAAT GTTAGTTTCA AACGGTGAAA ACTATATTAA TATAAATATT TCTAATGCAG 37961 .......... .......... .......... .......... .......... .......... 345 CTGATTCTTA TATCTCCAAC ATATATTTTA GTGTACTTAT TTGGAAGTGT TTTAGGAAAT 38021 .......... .......... .......... .......... .......... .......... 345 ATCTCAATAA CGTAAAATAA GGAAAAATGA GTAAAATATA CATCAACAAG TGAAAAGTAA 38081 .......... .......... .......... .......... .......... .......... 345 AGTTTTATAA GAATAATTAT TGACTCCGGA GCCTAAATGA TATAAAATGT TAATAAAAAT 38141 .......... .......... .......... .......... .......... .......... 345 TCTAAAACGG TATATGAATA TTTATTTTAA TCAAAAGAAC AAAATCGCTG GAAGTGCATC 38201 .......... .......... .......... .......... .......... .......... 345 AATTTTGCTC GCTCGAAAAA GTAAAATTGT TGTCTTAGCA GCGATTTTCA AAATAAATTT 38261 .......... .......... .......... .......... .......... .......... 345 TTGTTAATGA TTTTTTAATA AATCACTGCC TAATCAGTGA TTTCTTTAAT TTTTTAAATT 38321 .......... .......... .......... .......... .......... .......... 345 ATTTATTTGA AAAAAAAATT AAGAGCCAAG GGCAGCGCGA TTTGTCTCCA AATTGTTTTT 38381 .......... .......... .......... .......... .......... .......... 345 TTATTTTTTC CAATCAATTT TTTTTACAAT TTTTAAAATT AAAATTAAAA TTTCTTAAAG 38441 .......... .......... .......... .......... .......... .......... 345 AAATTTTTAT TTTAAATTTT TCTACTACTT ATTCCAAAAT AATTTTTAAT GATTTTTTAA 38501 .......... .......... .......... .......... .......... .......... 345 AACAAGTAGC AATCAAAATT TTTCTAAAAA ATTGATTTAA AAAAATATAA AAAAAAGTTG 38561 .......... .......... .......... .......... .......... .......... 345 GAGACAAATC GCTGCATTTT TTTTTTAAAT TTCAAATATA AGATTAAGAA AATCACTGCT 38621 .......... .......... .......... .......... .......... .......... 345 TATAGAGCAA TTTATTAATA ATTTTTTTTT GGGAAACTTA TATAAATATA CTAAAATAAA 38681 |||||||||| ||||||||| ||| | |||| .......... .......... .......... GGGAAACTTA CATAAATATA CTATATTAAA 375 AAAATATTTA CCATTTATAG CAATAATATC TTTTTTTCAC TTGATCACTT TTAATTCATT 38741 |||||||||| |||||||||| |||||| || | ||||| || |||||||||| ||||| || | AAAATATTTA CCATTTATAG CAATAACATT TGTTTTT-AC TTGATCACTT TTAATACA-T 433 TTTAATACAA GTT-TAATAC ATATTACAAA TAACAATTTA TTATTCATAT ATAATACAAA 38800 | ||||| || ||| |||||| ||||||| ||||||||| |||||| | || ||| ||| TATAATA-AA GTTCTAATAC ATATTACGGG GAACAATTTA TTATTC--AC AT-ATA-AAA 488 TTTTAATAAT AGATAATACA TTTATTGCAC ATTTTAATAC ACTTATAATA CAATATGTCA 38860 || || | |||||||| ||||| | | |||||||||| |||| ||| | |||| |||| --TTGAT--G A-ATAATACA TTTATCACTC ATTTTAATAC ACTTGTAACA CAATGTGTC- 542 AATTTTTACC AAACAAATAT AATATATTTC AAAAAACAAT TATAATTCAT ATATATTGCA 38920 | || ||||| |||||| || ||||||||| ||||| | | ||||| ||| |||||||||| ATTTCTTACC AAACAAGCAT AATATATTTT TAAAAAAAGT CATAATACAT ATATATTGCA 602 TACATAATTC ACTTTTAATT CATATTGTAG ATTTGACATA GCATTGTTAT -AAATGGTAA 38979 ||||| |||| ||| | ||| ||||||| || |||| ||||| | |||| ||| | || || TACAT-ATTC ACTGTAAATG CATATTGCAG ATTTAACATA GTATTGCTAT GTATTGNTAC 661 TAAATAAAAA 38989 |||| || NAAATGGTAA 671 hqPGS_C01HBa0163B20.1+_SGN-E213530+ (38652 38989) ******************************************************************************** EST sequence 262 +strand 661 n (File: SGN-E354195+) 1 TTGCTTAGGA ATATAATCTC TTGGTCTTAC ATTATAAACT ATTCCTGAAA CTATAAAGGA 61 ATCAGTGGGT AGTGTTTAAA TTGTAAGTTG TCTATGTGGT ATAGCTTAGT GGGTAGATTC 121 ATTTCTACTT AGGCTTGTAA AGCAATAGAG AATATTGCTT GAACGTGAGA TTAAAAACTT 181 TTTCTCATAT TTGTTGTAAT CGTGTTTCAC TTTTGCTTGT GAAGATTAGT GAAAACGATT 241 GAAAATCCTG TGAGACAAGT CGTGGTTTTA CTCCCTTAAG CAAGGAGGTT TCCACGTAAA 301 ATGTTGTGTT GTTTAAACTG CATTTACTTT CTGTTCATAC TTTTTAGTGT GTCAAGTGAA 361 CTGGGTCATT GACTTATAAG TGAAGGCATT TATTCTATCA GGCACCAAGC AACACATTAG 421 AGGGAAGCAT TTTATAAAGT ATTTGTTTGT ATTTTATTTA TATTTTATCT ACTATGTTCA 481 ATTTTTAAAC TGGAGTCTAA CTGATTCACA TATTCTCCAT CGAGAAACAC ATCAGAGGGA 541 AGCACTCTAT GAAGTATTTT ATTTAATTTT TTACCTGATC TTTTCAATAT TTATATTAGA 601 GTTCAAATTA TTTAATTAGA TTTTGACAAC AAACAACATT GTCGAGGGAA GCACACTATG 661 A Predicted gene structure (within gDNA segment 47155 to 39993): Exon 1 44495 44094 ( 402 n); cDNA 1 400 ( 400 n); score: 0.817 MATCH C01HBa0163B20.1- SGN-E354195+ 0.817 402 0.608 C PGS_C01HBa0163B20.1-_SGN-E354195+ (44495 44094) Alignment (genomic DNA sequence = upper lines): TTGTTTAGGA ATTCATTCTC TTGTTCTTAA ACTGTAAACC ATTCCTGAAT CTATAAAGGA 44436 ||| |||||| || | |||| ||| ||||| | | ||||| ||||||||| |||||||||| TTGCTTAGGA ATATAATCTC TTGGTCTTAC ATTATAAACT ATTCCTGAAA CTATAAAGGA 60 ATTGGTGTGT TGTGTTAGAA GTCTAGGTTG TCCAGGTGGG ATAGCTTAGT AGGTAGATTG 44376 || ||| || ||||| || | || |||| || | |||| |||||||||| |||||||| ATCAGTGGGT AGTGTTTAAA TTGTAAGTTG TCTATGTGGT ATAGCTTAGT GGGTAGATTC 120 TTTTCTACTT AGGCTTGTTA AGCAATAGAG GACTATTGCT TAACTGTAAG ATTGATAACT 44316 ||||||||| |||||||| | ||||||||| || ||||||| | | || || ||| | |||| ATTTCTACTT AGGCTTGTAA AGCAATAGA- GAATATTGCT TGAACGTGAG ATTAAAAACT 179 CTTTCTTACG TTTGGTGTAA TCATGTTTCG CTTTTGCTTT TGATGATTAA TGAAAACGAT 44256 ||||| | |||| ||||| || |||||| ||||||||| ||| ||||| |||||||||| TTTTCTCATA TTTGTTGTAA TCGTGTTTCA CTTTTGCTTG TGAAGATTAG TGAAAACGAT 239 TGAAAATCCT GTGAGACGGG TCGTGGTTTT ACTCCCTTAA GCAAGGAGGT TTCCACGTAA 44196 |||||||||| ||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TGAAAATCCT GTGAGACAAG TCGTGGTTTT ACTCCCTTAA GCAAGGAGGT TTCCACGTAA 299 AATCATTGTG TTGATTTTAC TGCATTTAAC TCTTGGTTTT ATTCATTAGT GTAGTAAGGG 44136 ||| ||||| ||| || || |||||||| | || | | | | ||||| || ||| | AAT-GTTGTG TTGTTTAAAC TGCATTTACT TTCTGTTCAT ACTTTTTAGT GTGTCAAGTG 358 ACCTGGTCCA TT-ACTTGTT AAGTGAAGGC ATATATTCTA TCA 44094 | |||| || || |||| | |||||||||| || ||||||| ||| AACTGGGTCA TTGACTT-AT AAGTGAAGGC ATTTATTCTA TCA 400 hqPGS_C01HBa0163B20.1-_SGN-E354195+ (44495 44094) ******************************************************************************** EST sequence 21 -strand 501 n (File: SGN-E203362-) 1 GCTGGAGATG GTGCAGAAAG TAGGTGCACA CTTCCCGATG GCGTCAGAAA GTGACCCTTC 61 CAACCAATGG CAAAGAAGTT TAGGAAAGTG ACTTGCCCAT ATAAAAGGCA CTTTCCTAAA 121 CACTTTTCTT CAGTTTTTGC AACTTGATAA AAACTTTTCA AGAACTCTTG CAAAGGCTCT 181 ACAAAGTAAA GGCAGAATTA TTCCAAGAAC AACAGCAATA TCTTGAGCTT TTCGTCTAGT 241 TGTTTAGGAA TATATTCTCT TGTTCTTAAA CTGTAAACCA TTCCTGAATC TATAAAGGAT 301 TTGGTGTGTT GTGTTAAAAG TCTAGGTTGT CCAGGTGGGA TAGCTTAGTG GGTAGATTGT 361 TTTCTACTTA GGCTTGTTAA GCAATAGAGG ACTATTGCTT AACGGTAAGA TTCATAACTC 421 TTTCTTACGT TTGGTGTAAT CGTGTTTTAC TTTTGCTTTT GAAGATTAGT GAAAACGATT 481 GAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 45966 to 43094): Exon 1 44737 44251 ( 487 n); cDNA 1 484 ( 484 n); score: 0.930 PPA cDNA 485 501 MATCH C01HBa0163B20.1- SGN-E203362- 0.930 487 0.972 C PGS_C01HBa0163B20.1-_SGN-E203362- (44737 44251) Alignment (genomic DNA sequence = upper lines): GCTGAAGACG GTACAGAAAG TAGGTGCACA CTTCCCGATG ACGTCAGAAA GTATGACTTT 44678 |||| ||| | || ||||||| |||||||||| |||||||||| ||||||||| | |||| | GCTGGAGATG GTGCAGAAAG TAGGTGCACA CTTCCCGATG GCGTCAGAAA G--TGACCCT 58 TCCAGCCAAT TGCAAAGAAG TTTAGGAAAG TGACTTGCCC ATATAAAAGG CACTTTCCTA 44618 |||| ||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAACCAAT GGCAAAGAAG TTTAGGAAAG TGACTTGCCC ATATAAAAGG CACTTTCCTA 118 AACATTTTTG TTTAGTTTTT GCAACTTGAT AAAAACTTTT CAAGAACTCT TGCAAAATCT 44558 |||| |||| || ||||||| |||||||||| |||||||||| |||||||||| |||||| || AACACTTTTC TTCAGTTTTT GCAACTTGAT AAAAACTTTT CAAGAACTCT TGCAAAGGCT 178 ACTACAAAGC AAAGGTAGAA TTATTCCAAG AACAACAACA ATATCTGGGG CTTTTCGTAT 44498 |||||||| ||||| |||| |||||||||| ||||||| || |||||| | | |||||||| | -CTACAAAGT AAAGGCAGAA TTATTCCAAG AACAACAGCA ATATCTTGAG CTTTTCGTCT 237 AGTTGTTTAG GAATTCATTC TCTTGTTCTT AAACTGTAAA CCATTCCTGA ATCTATAAAG 44438 |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGTTTAG GAATATATTC TCTTGTTCTT AAACTGTAAA CCATTCCTGA ATCTATAAAG 297 GAATTGGTGT GTTGTGTTAG AAGTCTAGGT TGTCCAGGTG GGATAGCTTA GTAGGTAGAT 44378 || ||||||| ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GATTTGGTGT GTTGTGTTAA AAGTCTAGGT TGTCCAGGTG GGATAGCTTA GTGGGTAGAT 357 TGTTTTCTAC TTAGGCTTGT TAAGCAATAG AGGACTATTG CTTAACTGTA AGATTGATAA 44318 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||||| |||| TGTTTTCTAC TTAGGCTTGT TAAGCAATAG AGGACTATTG CTTAACGGTA AGATTCATAA 417 CTCTTTCTTA CGTTTGGTGT AATCATGTTT CGCTTTTGCT TTTGATGATT AATGAAAACG 44258 |||||||||| |||||||||| |||| ||||| |||||||| ||||| |||| | |||||||| CTCTTTCTTA CGTTTGGTGT AATCGTGTTT TACTTTTGCT TTTGAAGATT AGTGAAAACG 477 ATTGAAA 44251 ||||||| ATTGAAA 484 hqPGS_C01HBa0163B20.1-_SGN-E203362- (44737 44251) ******************************************************************************** EST sequence 194 -strand 662 n (File: SGN-E546563-) 1 AACTCAAATG TTACTTTAAC TGTAAATGTT ATTTGTAGTT TTGATGATTT GACAAACAAT 61 GGGACCTCAT AAAGGTATCA GGTTCTCTAA TTGTGTATTG CAGGTGTCTT GTTTGAGGTA 121 TTGCAGAAGA AACAAAACCA GGGACCTAGT AGAGGTACCA GGCTCTCATG AAAATGAGTC 181 AGTCGACTGC CAGCTGGAGA TGGTACAGAA AGTAGGTGCA CACTTCCCGA TGGCGTCAGA 241 AAAGTGTGAC CTTTTCAGCA AATGGCAAAG GAGTTTAGGA AAGTGACTTG CCCACATAAA 301 AGGCACTTTC CAAAACATTT GTTTTTTAGT TTTTGCAACT TGATAAAAAC TTTTCAAGAA 361 CACTTGCAAA GGCTACACAA AAGGTAGAAT CATTCCAAGA ACAACAGCAA CATCTTGAGC 421 TTGTCGTATA GTTGTTTAGG AATTTATTCT CTTGTTGTTA AATTGTAAAC CACTGCTAAA 481 TCTATAAAGG AATTGGTGTG TTGTGTAAAA GTCTAGGTTG TCCAAGTGGG ATAGCTTAGT 541 GGGTAGATTG TTTTTCTACT TAGGCTTGTT GAGCAATAGA GGACTATTGT TTAACGGTAA 601 GATTGATAAC TCTTTCTTAC GTTTGGTGAA AAAAAAAAAA AAAAAAACTC GAGGGGGGCC 661 CG Predicted gene structure (within gDNA segment 47348 to 43359): Exon 1 44854 44300 ( 555 n); cDNA 74 627 ( 554 n); score: 0.875 PPA cDNA 629 648 MATCH C01HBa0163B20.1- SGN-E546563- 0.875 555 0.838 C PGS_C01HBa0163B20.1-_SGN-E546563- (44854 44300) Alignment (genomic DNA sequence = upper lines): GGTATCAATT TCT-TAATTG AGTATTGCAG GTTTATTGCT TGA-GTATTG CAGATGAAAC 44797 ||||||| | ||| |||||| ||||||||| || | ||| | ||| |||||| |||| ||||| GGTATCAGGT TCTCTAATTG TGTATTGCAG GTGTCTTGTT TGAGGTATTG CAGAAGAAAC 133 AAACTCAGGG ACCTAGTCGA GGTACTAGGC TCTCATGATG AGGAGCCAGT TGATTGTCAG 44737 ||| ||||| ||||||| || ||||| |||| |||||||| | ||| |||| || || ||| AAAACCAGGG ACCTAGTAGA GGTACCAGGC TCTCATGAAA ATGAGTCAGT CGACTGCCAG 193 CTGAAGACGG TACAGAAAGT AGGTGCACAC TTCCCGATGA CGTCAG-AAA GTATGACTTT 44678 ||| ||| || |||||||||| |||||||||| ||||||||| |||||| ||| || |||| || CTGGAGATGG TACAGAAAGT AGGTGCACAC TTCCCGATGG CGTCAGAAAA GTGTGACCTT 253 TCCAGCCAAT TGCAAAGAAG TTTAGGAAAG TGACTTGCCC ATATAAAAGG CACTTTCCTA 44618 | |||| ||| |||||| || |||||||||| |||||||||| | |||||||| |||||||| | TTCAGCAAAT GGCAAAGGAG TTTAGGAAAG TGACTTGCCC ACATAAAAGG CACTTTCCAA 313 AACATTT-TT GTTTAGTTTT TGCAACTTGA TAAAAACTTT TCAAGAACTC TTGCAAAATC 44559 ||||||| || ||||||||| |||||||||| |||||||||| |||||||| | ||||||| | AACATTTGTT TTTTAGTTTT TGCAACTTGA TAAAAACTTT TCAAGAACAC TTGCAAAGGC 373 TACTACAAAG CAAAGGTAGA ATTATTCCAA GAACAACAAC AATATCTGGG GCTTTTCGTA 44499 ||| || | ||||||||| || ||||||| |||||||| | || |||| | |||| ||||| TAC-AC--A- -AAAGGTAGA ATCATTCCAA GAACAACAGC AACATCTTGA GCTTGTCGTA 428 TAGTTGTTTA GGAATTCATT CTCTTGTTCT TAAACTGTAA ACCATTCCTG AATCTATAAA 44439 |||||||||| |||||| ||| |||||||| | |||| ||||| |||| | || |||||||||| TAGTTGTTTA GGAATTTATT CTCTTGTTGT TAAATTGTAA ACCACTGCTA AATCTATAAA 488 GGAATTGGTG TGTTGTGTTA GAAGTCTAGG TTGTCCAGGT GGGATAGCTT AGTAGGTAGA 44379 |||||||||| ||||||| || ||||||||| ||||||| || |||||||||| ||| |||||| GGAATTGGTG TGTTGTG-TA AAAGTCTAGG TTGTCCAAGT GGGATAGCTT AGTGGGTAGA 547 TTG-TTTTCT ACTTAGGCTT GTTAAGCAAT AGAGGACTAT TGCTTAACTG TAAGATTGAT 44320 ||| |||||| |||||||||| ||| |||||| |||||||||| || ||||| | |||||||||| TTGTTTTTCT ACTTAGGCTT GTTGAGCAAT AGAGGACTAT TGTTTAACGG TAAGATTGAT 607 AACTCTTTCT TACGTTTGGT 44300 |||||||||| |||||||||| AACTCTTTCT TACGTTTGGT 627 hqPGS_C01HBa0163B20.1-_SGN-E546563- (44854 44300) ******************************************************************************** EST sequence 272 +strand 407 n (File: SGN-E549133+) 1 AGTGGTAAAG AGGTAGAAAT TGCTATACTC AAAGCAGAAC TGCTTACTGC ACAGAGTGAG 61 GGACCTGGTT CTTCAGTGAT TCAAGCTATG GAGAAGGAAA ATGCTGAGTT GAAGGCGAAT 121 ATCACTGCCC TGCAAGAAAA GTCCATCAAA GATAATGATG CTGCCAATGC ACGACTCACT 181 CTTGTTATCC AGTCCCTGTC TCATCCTCCC CCCTCTTCCT AGCCTATTGA ACACTTTCTT 241 TTGTGTCAAT TTTTTTTGTG GCTTATCACT GTATTGATGG ATATTCAGTT TGTTTTTAAT 301 GTATTAATGT TATGATGGCA TGCCTGTTAA TTTNAAAAAA AAAAAAAAAA AAAAAAAAAA 361 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 46348 to 43756): Exon 1 45541 45205 ( 337 n); cDNA 1 333 ( 333 n); score: 0.847 PPA cDNA 357 407 MATCH C01HBa0163B20.1- SGN-E549133+ 0.847 337 0.828 C PGS_C01HBa0163B20.1-_SGN-E549133+ (45541 45205) Alignment (genomic DNA sequence = upper lines): AGAGGTAAAG AGGCAGAAAT TGTTATACTC AAAGCAGAAC TGCTTACTGC ACAGAGTGAG 45482 || ||||||| ||| |||||| || ||||||| |||||||||| |||||||||| |||||||||| AGTGGTAAAG AGGTAGAAAT TGCTATACTC AAAGCAGAAC TGCTTACTGC ACAGAGTGAG 60 GGACCTGGTT CTTCAGTTGT TCAAGCTCTG GAGAAAGATA ATGATGAGTT GAAGGTGAAG 45422 |||||||||| ||||||| | ||||||| || ||||| || | ||| |||||| ||||| ||| GGACCTGGTT CTTCAGTGAT TCAAGCTATG GAGAAGGAAA ATGCTGAGTT GAAGGCGAAT 120 ATAATTGCCC TGCAAGAAAA GGCCATCAAG GATAATGATG TTGCCAATGC ACGACTCACT 45362 || | ||||| |||||||||| | ||||||| |||||||||| ||||||||| |||||||||| ATCACTGCCC TGCAAGAAAA GTCCATCAAA GATAATGATG CTGCCAATGC ACGACTCACT 180 CTTGTTATCC AGTCCCTATC TCAAACCCCT CCCTCTTCCT AGATTGTTAA TCAATCCTTC 45302 |||||||||| ||||||| || ||| | || |||||||||| || | || | | | ||| CTTGTTATCC AGTCCCTGTC TCATCCTCCC CCCTCTTCCT AGCCTATTGA AC-A--CTTT 237 CGTGTGTCAC TTTTTTTGTT GTGTGGCTTA TCAATATGTC GATGAAT-TT TAGTTTGTTT 45243 | | ||| | ||||| || ||||||||| ||| | | | |||| || || ||||||||| CTTTTGTGTC AATTTTT-TT -TGTGGCTTA TCACTGTATT GATGGATATT CAGTTTGTTT 295 TTAATGTATT TATGTTATGA TGGCATGTTG GTTACTTT 45205 |||||||||| ||||||||| ||||||| |||| ||| TTAATGTATT AATGTTATGA TGGCATGCCT GTTAATTT 333 hqPGS_C01HBa0163B20.1-_SGN-E549133+ (45541 45205) ******************************************************************************** EST sequence 259 +strand 386 n (File: SGN-E309004+) 1 GTGGTAAAGA GGTAGAAATT GCTATACTCA AAGCAGAACT GCTTACTGCA CAGAGTGAGG 61 GACCTGGTTC TTCAGTGATT CAAGCTATGG AGAAGGAAAA TGCTGAGTTG AAGGCGAATA 121 TCACTGCCCT GCAAGAAAAG TCCATCAAAG ATAATGATGC TGCCAATGCA CGACTCACTC 181 TTGTTATCCA GTCCCTGTCT CATCCTCCCC CCTCTTCCTA GCCTATTGAA CACTTTCTTT 241 TGTGTCAATT TTTTTTGTGG CTTATCACTG TATTGATGGA TATTCAGTTT GTTTTTAATG 301 TATTAATGTT ATGATGGCAT GCCCTGTTAA TTTAAAAAAA AAAAAANAAA NNNAAAAAAA 361 AAAAAAAAAA AAAAAAAAAA AAAAAA Predicted gene structure (within gDNA segment 46338 to 43956): Exon 1 45538 45217 ( 322 n); cDNA 3 320 ( 318 n); score: 0.856 PPA cDNA 336 350 MATCH C01HBa0163B20.1- SGN-E309004+ 0.856 322 0.834 C PGS_C01HBa0163B20.1-_SGN-E309004+ (45538 45217) Alignment (genomic DNA sequence = upper lines): GGTAAAGAGG CAGAAATTGT TATACTCAAA GCAGAACTGC TTACTGCACA GAGTGAGGGA 45479 |||||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTAAAGAGG TAGAAATTGC TATACTCAAA GCAGAACTGC TTACTGCACA GAGTGAGGGA 62 CCTGGTTCTT CAGTTGTTCA AGCTCTGGAG AAAGATAATG ATGAGTTGAA GGTGAAGATA 45419 |||||||||| |||| |||| |||| ||||| || || |||| ||||||||| || ||| || CCTGGTTCTT CAGTGATTCA AGCTATGGAG AAGGAAAATG CTGAGTTGAA GGCGAATATC 122 ATTGCCCTGC AAGAAAAGGC CATCAAGGAT AATGATGTTG CCAATGCACG ACTCACTCTT 45359 | |||||||| |||||||| | |||||| ||| ||||||| || |||||||||| |||||||||| ACTGCCCTGC AAGAAAAGTC CATCAAAGAT AATGATGCTG CCAATGCACG ACTCACTCTT 182 GTTATCCAGT CCCTATCTCA AACCCCTCCC TCTTCCTAGA TTGTTAATCA ATCCTTCCGT 45299 |||||||||| |||| ||||| | || ||| ||||||||| | || | | | ||| | | GTTATCCAGT CCCTGTCTCA TCCTCCCCCC TCTTCCTAGC CTATTGAAC- A--CTTTCTT 239 GTGTCACTTT TTTTGTTGTG TGGCTTATCA ATATGTCGAT GAAT-TTTAG TTTGTTTTTA 45240 ||| | | |||| || || |||||||||| | | | ||| | || || || |||||||||| TTGTGTCAAT TTTT-TT-TG TGGCTTATCA CTGTATTGAT GGATATTCAG TTTGTTTTTA 297 ATGTATTTAT GTTATGATGG CAT 45217 ||||||| || |||||||||| ||| ATGTATTAAT GTTATGATGG CAT 320 hqPGS_C01HBa0163B20.1-_SGN-E309004+ (45538 45217) ******************************************************************************** EST sequence 252 -strand 805 n (File: SGN-E352005-) 1 TGAAAATTAA CTGCAAGCAA AATAAATACC AGAAATGATT TTATTAATGA ATCATTGTGA 61 GTACAATTCC TGGTTCTCCT GATTCTCTCT CNTAAGTTTC TCCGTGATTC GAGGGCCTTT 121 AGTAGCGTAT TTCTCGAATT GTTATAAGAT GTAGACCTCT TTGAGATTTT GTCGATCTCT 181 AGAACGTCGA AAAGCGCTTC GTCATTTTAA GTCGATCTCC GTGTAGAACT CCGTTGATCA 241 GCCCTTCGAA GAACTATTGA TGTTGATGTT GTAGCTTTCT CCAATTTGTT GAATGCTTGT 301 TGAAGAGTAT TCAGGATCCC CTTGAATGTC ATGTCTATCC CCTGTTTATA GTTGTAGGGA 361 GTGGACAAGG TTGCTTGCGA TCGGCCAGAT AATGTCATTT TGACACTTGA AACATTTCGA 421 TTCGTTCTTG TATTTGACAG GGACTACCAC CTCATTTGGA CACGTGGCGT CACCTTGTAG 481 GTCTTGAATT CTTAGTCAAT GTGACTCGTT GCATGGGTTT GGACTTCAAC GTGAAATGAA 541 CCTTGGATTT GAATTTAATA AGATGAAATT ATTTATTTGT AAAGCCCAAA TTACTTATTC 601 AGCCTAATGA ACATGGATTT AATTCAAATG ATATATGAAT TTGATCCAAT AAAATTTATG 661 TGTCAACAAG TGCCCATTAC TTTGAGGCTT GTCGACATAG AAGCTTGCCG ATGTTTGCAG 721 ACAAAACTTG AAGTAGCCAA GAATATTTTT TACGTTTTCT TGAGGACTTC TCTACGTGTA 781 GGTTTGCCAC ATTTTTACGA CAAAA Predicted gene structure (within gDNA segment 53594 to 59693): Exon 1 56385 57184 ( 800 n); cDNA 2 805 ( 804 n); score: 0.819 MATCH C01HBa0163B20.1+ SGN-E352005- 0.819 800 0.994 C PGS_C01HBa0163B20.1+_SGN-E352005- (56385 57184) Alignment (genomic DNA sequence = upper lines): GAAAATTAAC TGCAAGCAAA ATAAATAAAA AGAAAAATGT GATTCTATTA CTGAATCGTT 56444 |||||||||| |||||||||| |||||| | || |||| |||| ||||| |||||| || GAAAATTAAC TGCAAGCAAA ATAAAT-ACC AG--AAAT-- GATTTTATTA ATGAATCATT 56 GTGAGTACAA TTCAGTTGTT CTCTTGATTC TGTCTCCTAA GTTTCTCCGC GATTCGAGGG 56504 |||||||||| ||| | ||| ||| |||||| | |||| ||| ||||||||| |||||||||| GTGAGTACAA TTC-CTGGTT CTCCTGATTC TCTCTCNTAA GTTTCTCCGT GATTCGAGGG 115 CCTTCAGT-- --T-TTTCT- GAATTGTTGG ATGATGTAGA CCTCTTTGAG ATATTATCGA 56558 |||| ||| | ||||| |||||||| | |||||||| |||||||||| || || |||| CCTTTAGTAG CGTATTTCTC GAATTGTTAT AAGATGTAGA CCTCTTTGAG ATTTTGTCGA 175 TCTCCGGGAC ATTGGAAAGC GCTTCGTCGT TGT-AGTTGA TTTGCG-GTT GAACTCCGTC 56616 |||| | || | | ||||| |||||||| | | | ||| || | | || || ||||||||| TCTCTAGAAC GTCGAAAAGC GCTTCGTCAT TTTAAGTCGA TCTCCGTGTA GAACTCCGTT 235 GATCACTCCT TCGAAGAACT ATTGATGTTG ATGTTGTAGC TTTCTCCAAT TTTTTGAATG 56676 ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| GATCAGCCCT TCGAAGAACT ATTGATGTTG ATGTTGTAGC TTTCTCCAAT TTGTTGAATG 295 CTTGTTGAAG AGTATTCTAT CTCTCTTTGA ATGTCATGTC TAGCCCCTAT TTATAGTTGT 56736 |||||||||| ||||||| || | |||| |||||||||| || ||||| | |||||||||| CTTGTTGAAG AGTATTCAGG ATCCCCTTGA ATGTCATGTC TATCCCCTGT TTATAGTTGT 355 AGAGAGTGGA CAAGGTTGTT TGTGAT-TGT CAAATGATGT CATTTTGACA CTTGGCACAT 56795 || ||||||| |||||||| | || ||| | || || |||| |||||||||| |||| |||| AGGGAGTGGA CAAGGTTGCT TGCGATCGGC CAGATAATGT CATTTTGACA CTTGAAACAT 415 TTTGATTCGT TCTTGCATTT GACTGGGACT ACCACATCAT TTGGACACGT AGCGTCACCT 56855 || ||||||| ||||| |||| ||| |||||| ||||| |||| |||||||||| ||||||||| TTCGATTCGT TCTTGTATTT GACAGGGACT ACCACCTCAT TTGGACACGT GGCGTCACCT 475 TGTTGGTCTT AGATAATTAG TCATTGTGAC ACGTGTCATG GGTTTGGGCT TTAAGGTGAA 56915 ||| |||||| || |||| ||| |||||| ||| |||| ||||||| || | || ||||| TGTAGGTCTT GAATTCTTAG TCAATGTGAC TCGTTGCATG GGTTTGGACT TCAACGTGAA 535 ATGAACCTTG AATTTGAATT TAATAAGATG GACTTATTTA TTTGTAAAGC CCAAATTAAT 56975 |||||||||| ||||||||| |||||||||| | ||||||| |||||||||| |||||||| | ATGAACCTTG GATTTGAATT TAATAAGATG AAATTATTTA TTTGTAAAGC CCAAATTACT 595 TTTTCATCCC AAATGAACAT TGATTTAATT CAAATTTTGT ATGAATTTGA TCCAATACAA 57035 | |||| || ||||||||| ||||||||| ||||| | | |||||||||| ||||||| || TATTCA-GCC TAATGAACAT GGATTTAATT CAAATGATAT ATGAATTTGA TCCAATAAAA 654 TTTATTTGTC TACAAATGCC CCTTATTTTG AGGACTGTCG ATGTAGATGT TTGCCGAAGT 57095 ||||| |||| |||| |||| | ||| |||| ||| ||||| | |||| | ||||||| || TTTATGTGTC AACAAGTGCC CATTACTTTG AGGCTTGTCG ACATAGAAGC TTGCCGATGT 714 TTGGCGACAA GACTTGAAGT AGTCATGAAT GTGTTTTCCC TTTT-TTTA- GACTCCTCTG 57153 ||| ||||| ||||||||| || || |||| | |||| | |||| || | |||| |||| TTGCAGACAA AACTTGAAGT AGCCAAGAAT ATTTTTTACG TTTTCTTGAG GACTTCTCTA 774 TGTGTAGGCT TTCCAAATTT TGACGAAGAA A 57184 ||||||| | | ||| |||| | |||| || | CGTGTAGGTT TGCCACATTT TTACGACAAA A 805 hqPGS_C01HBa0163B20.1+_SGN-E352005- (56385 57184) ******************************************************************************** EST sequence 287 -strand 671 n (File: SGN-E349707-) 1 CGAATTGTTA TAAGATGTAG ACCTCTTTGA GATTTTGTCG ATCTCTAGAA CGTCGAAAAG 61 CGCTTCGTCA TTTTAAGTCG ATCTCCGTGT AGAACTCCGT TGATCAGCCC TTCGAAGAAC 121 TATTGATGTT GATGTTGTAG CTTTCTCCAA TTTGTTGAAT GCTTGTTGAA GAGTATTCAG 181 GATCCCCTTG AATGTCATGT CTATCCCCTG TTTATAGTTG TAGGGAGTGG ACAAGGTTGC 241 TTGCGATCGG CCAGATAATG TCATTTTGAC ACTTGAAACA TTTCGATTCG TTCTTGTATT 301 TGACAGGGAC TACCACCTCA TTTGGACACG TGGCGTCACC TTGTAGGTCT TGAATTCTTA 361 GTCAATGTGA CTCGTTGCAT GGGTTTGGAC TTCAACGTGA AATGAACCTT GGATTTGAAT 421 TTAATAAGAT GAAATTATTT ATTTGTAAAG CCCAAATTAC TTATTCAGCC TAATGAACAT 481 GGATTTAATT CAAATGATAT ATGAATTTGA TCCAATAAAA TTTATGTGTC AACAAGTGCC 541 CATTACTTTG AGGCTTGTCG ACATAGAAGC TTGCCGATGT TTGCAGACAA AACTTGAAGT 601 AGCCAAGAAT ATTTTTTACG TTTTCTTGAG GACTTCTCTA CGTGTAGGTT TGCCACATTT 661 TTACGACAAA A Predicted gene structure (within gDNA segment 54934 to 59693): Exon 1 56519 57184 ( 666 n); cDNA 2 671 ( 670 n); score: 0.833 MATCH C01HBa0163B20.1+ SGN-E349707- 0.833 666 0.993 C PGS_C01HBa0163B20.1+_SGN-E349707- (56519 57184) Alignment (genomic DNA sequence = upper lines): GAATTGTTGG ATGATGTAGA CCTCTTTGAG ATATTATCGA TCTCCGGGAC ATTGGAAAGC 56578 |||||||| | |||||||| |||||||||| || || |||| |||| | || | | ||||| GAATTGTTAT AAGATGTAGA CCTCTTTGAG ATTTTGTCGA TCTCTAGAAC GTCGAAAAGC 61 GCTTCGTCGT TGT-AGTTGA TTTGCG-GTT GAACTCCGTC GATCACTCCT TCGAAGAACT 56636 |||||||| | | | ||| || | | || || ||||||||| ||||| ||| |||||||||| GCTTCGTCAT TTTAAGTCGA TCTCCGTGTA GAACTCCGTT GATCAGCCCT TCGAAGAACT 121 ATTGATGTTG ATGTTGTAGC TTTCTCCAAT TTTTTGAATG CTTGTTGAAG AGTATTCTAT 56696 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ||||||| ATTGATGTTG ATGTTGTAGC TTTCTCCAAT TTGTTGAATG CTTGTTGAAG AGTATTCAGG 181 CTCTCTTTGA ATGTCATGTC TAGCCCCTAT TTATAGTTGT AGAGAGTGGA CAAGGTTGTT 56756 || | |||| |||||||||| || ||||| | |||||||||| || ||||||| |||||||| | ATCCCCTTGA ATGTCATGTC TATCCCCTGT TTATAGTTGT AGGGAGTGGA CAAGGTTGCT 241 TGTGAT-TGT CAAATGATGT CATTTTGACA CTTGGCACAT TTTGATTCGT TCTTGCATTT 56815 || ||| | || || |||| |||||||||| |||| |||| || ||||||| ||||| |||| TGCGATCGGC CAGATAATGT CATTTTGACA CTTGAAACAT TTCGATTCGT TCTTGTATTT 301 GACTGGGACT ACCACATCAT TTGGACACGT AGCGTCACCT TGTTGGTCTT AGATAATTAG 56875 ||| |||||| ||||| |||| |||||||||| ||||||||| ||| |||||| || |||| GACAGGGACT ACCACCTCAT TTGGACACGT GGCGTCACCT TGTAGGTCTT GAATTCTTAG 361 TCATTGTGAC ACGTGTCATG GGTTTGGGCT TTAAGGTGAA ATGAACCTTG AATTTGAATT 56935 ||| |||||| ||| |||| ||||||| || | || ||||| |||||||||| ||||||||| TCAATGTGAC TCGTTGCATG GGTTTGGACT TCAACGTGAA ATGAACCTTG GATTTGAATT 421 TAATAAGATG GACTTATTTA TTTGTAAAGC CCAAATTAAT TTTTCATCCC AAATGAACAT 56995 |||||||||| | ||||||| |||||||||| |||||||| | | |||| || ||||||||| TAATAAGATG AAATTATTTA TTTGTAAAGC CCAAATTACT TATTCA-GCC TAATGAACAT 480 TGATTTAATT CAAATTTTGT ATGAATTTGA TCCAATACAA TTTATTTGTC TACAAATGCC 57055 ||||||||| ||||| | | |||||||||| ||||||| || ||||| |||| |||| |||| GGATTTAATT CAAATGATAT ATGAATTTGA TCCAATAAAA TTTATGTGTC AACAAGTGCC 540 CCTTATTTTG AGGACTGTCG ATGTAGATGT TTGCCGAAGT TTGGCGACAA GACTTGAAGT 57115 | ||| |||| ||| ||||| | |||| | ||||||| || ||| ||||| ||||||||| CATTACTTTG AGGCTTGTCG ACATAGAAGC TTGCCGATGT TTGCAGACAA AACTTGAAGT 600 AGTCATGAAT GTGTTTTCCC TTTT-TTTA- GACTCCTCTG TGTGTAGGCT TTCCAAATTT 57173 || || |||| | |||| | |||| || | |||| |||| ||||||| | | ||| |||| AGCCAAGAAT ATTTTTTACG TTTTCTTGAG GACTTCTCTA CGTGTAGGTT TGCCACATTT 660 TGACGAAGAA A 57184 | |||| || | TTACGACAAA A 671 hqPGS_C01HBa0163B20.1+_SGN-E349707- (56519 57184) ******************************************************************************** EST sequence 216 -strand 618 n (File: SGN-E351299-) 1 CGAAAAGCGC TTCGTCATTT TAAGTCGATC TCCGTGTAGA ACTCCGTTGA TCAGCCCTTC 61 GAAGAACTAT TGATGTTGAT GTTGTAGCTT TCTCCAATTT GTTGAATGCT TGTTGAAGAG 121 TATTCAGGAT CCCCTTGAAT GTCATGTCTA TCCCCTGTTT ATAGTTGTAG GGAGTGGACA 181 AGGTTGCTTG CGATCGGCCA GATAATGTCA TTTTGACACT TGAAACATTT CGATTCGTTC 241 TTGTATTTGA CAGGGACTAC CACCTCATTT GGACACGTGG CGTCACCTTG TAGGTCTTGA 301 ATTCTTAGTC AATGTGACTC GTTGCATGGG TTTGGACTTC AACGTGAAAT GAACCTTGGA 361 TTTGAATTTA ATAAGATGAA ATTATTTATT TGTAAAGCCC AAATTACTTA TTCAGCCTAA 421 TGAACATGGA TTTAATTCAA ATGATATATG AATTTGATCC AATAAAATTT ATGTGTCAAC 481 AAGTGCCCAT TACTTTGAGG CTTGTCGACA TAGAAGCTTG CCGATGTTTG CAGACAAAAC 541 TTGAAGTAGC CAAGAATATT TTTTACGTTT TCTTGAGGAC TTCTCTACGT GTAGGTTTGC 601 CACATTTTTA CGACAAAA Predicted gene structure (within gDNA segment 55464 to 59693): Exon 1 56574 57184 ( 611 n); cDNA 4 618 ( 615 n); score: 0.836 MATCH C01HBa0163B20.1+ SGN-E351299- 0.836 611 0.989 C PGS_C01HBa0163B20.1+_SGN-E351299- (56574 57184) Alignment (genomic DNA sequence = upper lines): AAAGCGCTTC GTCGTTGT-A GTTGATTTGC G-GTTGAACT CCGTCGATCA CTCCTTCGAA 56631 |||||||||| ||| || | | || ||| | | | || ||||| |||| ||||| |||||||| AAAGCGCTTC GTCATTTTAA GTCGATCTCC GTGTAGAACT CCGTTGATCA GCCCTTCGAA 63 GAACTATTGA TGTTGATGTT GTAGCTTTCT CCAATTTTTT GAATGCTTGT TGAAGAGTAT 56691 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GAACTATTGA TGTTGATGTT GTAGCTTTCT CCAATTTGTT GAATGCTTGT TGAAGAGTAT 123 TCTATCTCTC TTTGAATGTC ATGTCTAGCC CCTATTTATA GTTGTAGAGA GTGGACAAGG 56751 || || | ||||||||| ||||||| || ||| |||||| ||||||| || |||||||||| TCAGGATCCC CTTGAATGTC ATGTCTATCC CCTGTTTATA GTTGTAGGGA GTGGACAAGG 183 TTGTTTGTGA T-TGTCAAAT GATGTCATTT TGACACTTGG CACATTTTGA TTCGTTCTTG 56810 ||| ||| || | | || || ||||||||| ||||||||| |||||| || |||||||||| TTGCTTGCGA TCGGCCAGAT AATGTCATTT TGACACTTGA AACATTTCGA TTCGTTCTTG 243 CATTTGACTG GGACTACCAC ATCATTTGGA CACGTAGCGT CACCTTGTTG GTCTTAGATA 56870 ||||||| | |||||||||| ||||||||| ||||| |||| |||||||| | ||||| || TATTTGACAG GGACTACCAC CTCATTTGGA CACGTGGCGT CACCTTGTAG GTCTTGAATT 303 ATTAGTCATT GTGACACGTG TCATGGGTTT GGGCTTTAAG GTGAAATGAA CCTTGAATTT 56930 ||||||| | ||||| ||| ||||||||| || ||| || |||||||||| ||||| |||| CTTAGTCAAT GTGACTCGTT GCATGGGTTT GGACTTCAAC GTGAAATGAA CCTTGGATTT 363 GAATTTAATA AGATGGACTT ATTTATTTGT AAAGCCCAAA TTAATTTTTC ATCCCAAATG 56990 |||||||||| ||||| | || |||||||||| |||||||||| ||| || ||| | || |||| GAATTTAATA AGATGAAATT ATTTATTTGT AAAGCCCAAA TTACTTATTC A-GCCTAATG 422 AACATTGATT TAATTCAAAT TTTGTATGAA TTTGATCCAA TACAATTTAT TTGTCTACAA 57050 ||||| |||| |||||||||| | |||||| |||||||||| || ||||||| |||| |||| AACATGGATT TAATTCAAAT GATATATGAA TTTGATCCAA TAAAATTTAT GTGTCAACAA 482 ATGCCCCTTA TTTTGAGGAC TGTCGATGTA GATGTTTGCC GAAGTTTGGC GACAAGACTT 57110 ||||| ||| ||||||| |||||| || || | ||||| || ||||| ||||| |||| GTGCCCATTA CTTTGAGGCT TGTCGACATA GAAGCTTGCC GATGTTTGCA GACAAAACTT 542 GAAGTAGTCA TGAATGTGTT TTCCCTTTT- TTTA-GACTC CTCTGTGTGT AGGCTTTCCA 57168 ||||||| || |||| | || || | |||| || | |||| |||| |||| ||| || ||| GAAGTAGCCA AGAATATTTT TTACGTTTTC TTGAGGACTT CTCTACGTGT AGGTTTGCCA 602 AATTTTGACG AAGAAA 57184 ||||| ||| | ||| CATTTTTACG ACAAAA 618 hqPGS_C01HBa0163B20.1+_SGN-E351299- (56574 57184) ******************************************************************************** EST sequence 130 +strand 584 n (File: SGN-E333295+) 1 TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 61 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA 121 TGACAAAGAA GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG 181 CAGCCTGTGT CACCCTGACT AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT 241 CAACAAAGTC AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA 301 CCCTCTCCGC AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG 361 CCACTGTGGC AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA 421 GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG 481 AGGAACTAAN GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAANGATA 541 TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTAT Predicted gene structure (within gDNA segment 62694 to 64488): Exon 1 63294 63878 ( 585 n); cDNA 1 584 ( 584 n); score: 0.991 MATCH C01HBa0163B20.1+ SGN-E333295+ 0.991 585 1.002 C PGS_C01HBa0163B20.1+_SGN-E333295+ (63294 63878) Alignment (genomic DNA sequence = upper lines): TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 63353 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 60 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA 63413 |||||||||| |||||||||| ||||| |||| |||||||||| |||| |||| |||||||||| TTGTTTCATA GGGAACTCCC CCCAT-AAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA 119 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 63473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 179 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT 63533 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT 239 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 63593 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 299 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 63653 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 359 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC 63713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC 419 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT 63773 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT 479 GAGGAACTAA GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT 63833 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| GAGGAACTAA NGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAANGAT 539 ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTAT 63878 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTAT 584 hqPGS_C01HBa0163B20.1+_SGN-E333295+ (63294 63878) ******************************************************************************** EST sequence 53 +strand 473 n (File: SGN-E330837+) 1 TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTGACT TACAAGAAGA ACCATAGGGG 61 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA 121 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 181 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT 241 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 301 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 361 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT 421 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCT Predicted gene structure (within gDNA segment 62694 to 64376): Exon 1 63294 63766 ( 473 n); cDNA 1 473 ( 473 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E330837+ 0.994 473 1.000 C PGS_C01HBa0163B20.1+_SGN-E330837+ (63294 63766) Alignment (genomic DNA sequence = upper lines): TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 63353 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTGACT TACAAGAAGA ACCATAGGGG 60 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA 63413 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTTCATA GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA 120 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 63473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 180 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT 63533 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT 240 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 63593 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 300 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 63653 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 360 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC 63713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT 420 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCT 63766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCT 473 hqPGS_C01HBa0163B20.1+_SGN-E330837+ (63294 63766) ******************************************************************************** EST sequence 80 +strand 652 n (File: SGN-E332231+) 1 ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 61 TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 121 CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 181 CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACATCATC AAATGGAGTT GCAACTTCAA 241 CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 301 TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 361 CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 421 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 481 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 541 TGGATGACCT CAAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 601 GTTTCACAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TG Predicted gene structure (within gDNA segment 62697 to 64560): Exon 1 63297 63950 ( 654 n); cDNA 1 652 ( 652 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E332231+ 0.994 654 1.003 C PGS_C01HBa0163B20.1+_SGN-E332231+ (63297 63950) Alignment (genomic DNA sequence = upper lines): ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 63356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 60 TTTCATAGGG AACTCCCCCC ATAAAAAAAA ATCCAAAAAA ACAAAAAAAC CAAAAAAATG 63416 |||||||||| |||||||||| || ||||||| |||||||||| | ||||||| |||||||||| TTTCATAGGG AACTCCCCCC AT-AAAAAAA ATCCAAAAAA ATCAAAAAAC CAAAAAAATG 119 ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG TGGTGGCTTG TGTGGTGGCA 63476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG TGGTGGCTTG TGTGGTGGCA 179 GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACATCAT CAAATGGAGT TGCAACTTCA 63536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACATCAT CAAATGGAGT TGCAACTTCA 239 ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG TGAAAAGACC 63596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG TGAAAAGACC 299 CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC ATTCGAAGCC 63656 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC ATTCGAAGCC 359 ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA AGCTGCCAGT 63716 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA AGCTGCCAGT 419 GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT AGCCGTTGAG 63776 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT AGCCGTTGAG 479 GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCAAAGAT GAAGGATATA 63836 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCAAAGAT GAAGGATATA 539 GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGAAGAGAC TTGTTTAGAT 63896 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGAAGAGAC TTGTTTAGAT 599 GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA TGATGAAGCT AATG 63950 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||| GGTTTCA-CA AATCAGAATA CAGTGCAACC CGTGACGAAA TGATGAAGCT AATG 652 hqPGS_C01HBa0163B20.1+_SGN-E332231+ (63297 63950) ******************************************************************************** EST sequence 5 +strand 558 n (File: SGN-E331580+) 1 ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 61 TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 121 CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 181 CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACATCATC AAATGGAGTT GCAACTTCAA 241 CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 301 TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 361 CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 421 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 481 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 541 TGGATGACCT CAAGTCAT Predicted gene structure (within gDNA segment 62697 to 64465): Exon 1 63297 63855 ( 559 n); cDNA 1 558 ( 558 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E331580+ 0.995 559 1.002 C PGS_C01HBa0163B20.1+_SGN-E331580+ (63297 63855) Alignment (genomic DNA sequence = upper lines): ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 63356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 60 TTTCATAGGG AACTCCCCCC ATAAAAAAAA ATCCAAAAAA ACAAAAAAAC CAAAAAAATG 63416 |||||||||| |||||||||| || ||||||| |||||||||| | ||||||| |||||||||| TTTCATAGGG AACTCCCCCC AT-AAAAAAA ATCCAAAAAA ATCAAAAAAC CAAAAAAATG 119 ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG TGGTGGCTTG TGTGGTGGCA 63476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG TGGTGGCTTG TGTGGTGGCA 179 GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACATCAT CAAATGGAGT TGCAACTTCA 63536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACATCAT CAAATGGAGT TGCAACTTCA 239 ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG TGAAAAGACC 63596 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG TGAAAAGACC 299 CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC ATTCGAAGCC 63656 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC ATTCGAAGCC 359 ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA AGCTGCCAGT 63716 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA AGCTGCCAGT 419 GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT AGCCGTTGAG 63776 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT AGCCGTTGAG 479 GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCAAAGAT GAAGGATATA 63836 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCAAAGAT GAAGGATATA 539 GTGGATGACC TCAAGTCAT 63855 |||||||||| ||||||||| GTGGATGACC TCAAGTCAT 558 hqPGS_C01HBa0163B20.1+_SGN-E331580+ (63297 63855) ******************************************************************************** EST sequence 159 +strand 818 n (File: SGN-E334509+) 1 ACAGCCTTCA ATAAAACCCC TCTGAGTTCT TCACTTACAA GAAGAACCAT AGGGGTTGTT 61 TCATAGGGAA CTCCCCCCAT AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 121 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 181 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 241 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 301 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 361 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 421 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 481 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 541 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 601 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 661 CGGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 721 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 781 CCGTAAGCTC CTTCAAATTC TGCCCTCAGC CTAATGCT Predicted gene structure (within gDNA segment 62699 to 64897): Exon 1 63299 64118 ( 820 n); cDNA 1 818 ( 818 n); score: 0.988 MATCH C01HBa0163B20.1+ SGN-E334509+ 0.988 820 1.002 C PGS_C01HBa0163B20.1+_SGN-E334509+ (63299 64118) Alignment (genomic DNA sequence = upper lines): ACAGCCTTCA ATAAAACCCC TCTGAGTTCT TCACTTACAA GAAGAACCAT AGGGGTTGTT 63358 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCCTTCA ATAAAACCCC TCTGAGTTCT TCACTTACAA GAAGAACCAT AGGGGTTGTT 60 TCATAGGGAA CTCCCCCCAT AAAAAAAAAT CCAAAAAAAC AAAAAAACCA AAAAAATGAC 63418 |||||||||| |||||||||| ||||||||| ||||||||| ||||||||| |||||||||| TCATAGGGAA CTCCCCCCAT -AAAAAAAAT CCAAAAAAAT CAAAAAACCA AAAAAATGAC 119 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 63478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 179 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 63538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 239 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 63598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 299 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 63658 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 359 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 63718 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 419 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 63778 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 479 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 63838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 539 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 63898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 599 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 63958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 659 CC-GGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 64017 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 719 AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 64077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 779 ACCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC T 64118 |||||||||| |||||||| | |||||| | |||||||||| | ACCGTAAGCT CCTTCAAA-T TCTGCC-CTC AGCCTAATGC T 818 hqPGS_C01HBa0163B20.1+_SGN-E334509+ (63299 64118) ******************************************************************************** EST sequence 156 +strand 816 n (File: SGN-E334504+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 661 GGGAGCTGAG TAGCAATGCT CTTTTCATGG TCAACAACTT TGGTGAAATG ATCACACAAA 721 ACACAGGCCT TACCCGCAAA TTGNTATCAA ACAGTGACTC ATTTGTCGAA GCTAGTAACC 781 GTAAGCTCCT TCAAATTTCT GCCTCAAGCC TAATGC Predicted gene structure (within gDNA segment 62700 to 64825): Exon 1 63300 64117 ( 818 n); cDNA 1 816 ( 816 n); score: 0.993 MATCH C01HBa0163B20.1+ SGN-E334504+ 0.993 818 1.002 C PGS_C01HBa0163B20.1+_SGN-E334504+ (63300 64117) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 63359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA 63419 |||||||||| ||||||||| |||||||||| |||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCAT- AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 119 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 63479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 179 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 63539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 239 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 63599 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 299 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 63659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 359 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 63719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 419 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 63779 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 479 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 63839 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 539 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 63899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 599 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 63959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 659 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGTGAAAT GATCACACAA 64019 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CGGGAGCTGA GTAGCAATGC TCTTTTCATG GTCAACAACT TTGGTGAAAT GATCACACAA 719 AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA AGCTAGTAAC 64079 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| AACACAGGCC TTACCCGCAA ATTGNTATCA AACAGTGACT CATTTGTCGA AGCTAGTAAC 779 CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGC 64117 |||||||||| |||||||||| ||||| |||| |||||||| CGTAAGCTCC TTCAAATTTC TGCCT-CAAG CCTAATGC 816 hqPGS_C01HBa0163B20.1+_SGN-E334504+ (63300 64117) ******************************************************************************** EST sequence 2 +strand 793 n (File: SGN-E547512+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 121 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 181 TGTGTCACCC TGACTAAACA TGATTCTGAC CCTTCATCAA ATGGAGTTGC AACTTCAACA 241 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 301 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 361 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 421 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 481 CTAAGGGGCT CTGTCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 541 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 601 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACC 661 CGGGAGCTAA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 721 AACACAGGCC TTACCCGCAA ATTGNTATCA AACAGTGACT CATTTGTCGA AGCCAGTAAC 781 CGTAAGCTCC TTC Predicted gene structure (within gDNA segment 62700 to 64702): Exon 1 63300 64092 ( 793 n); cDNA 1 793 ( 793 n); score: 0.984 MATCH C01HBa0163B20.1+ SGN-E547512+ 0.984 793 1.000 C PGS_C01HBa0163B20.1+_SGN-E547512+ (63300 64092) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 63359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA 63419 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 120 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 63479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 180 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 63539 |||||||||| |||||||||| ||||||||| | ||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAC CCTTCATCAA ATGGAGTTGC AACTTCAACA 240 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 63599 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 300 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 63659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 360 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 63719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 420 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 63779 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 480 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 63839 |||||||||| || ||||||| |||||||||| |||||||||| | |||||||| |||||||||| CTAAGGGGCT CTGTCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 540 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 63899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 600 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 63959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACC 660 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGTGAAAT GATCACACAA 64019 |||||||| | |||||||||| |||||||||| ||||||| || | |||||||| |||||||||| CGGGAGCTAA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 720 AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA AGCTAGTAAC 64079 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ||| |||||| AACACAGGCC TTACCCGCAA ATTGNTATCA AACAGTGACT CATTTGTCGA AGCCAGTAAC 780 CGTAAGCTCC TTC 64092 |||||||||| ||| CGTAAGCTCC TTC 793 hqPGS_C01HBa0163B20.1+_SGN-E547512+ (63300 64092) ******************************************************************************** EST sequence 170 +strand 766 n (File: SGN-E334024+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CNGTGAAATG ATCACACAAA 721 ACACAGGCCT TACCCGCAAT TGTTATCAAA CAGTGACTCA TTTGTC Predicted gene structure (within gDNA segment 62700 to 64677): Exon 1 63300 64067 ( 768 n); cDNA 1 766 ( 766 n); score: 0.987 MATCH C01HBa0163B20.1+ SGN-E334024+ 0.987 768 1.003 C PGS_C01HBa0163B20.1+_SGN-E334024+ (63300 64067) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 63359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA 63419 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCAT- AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA 119 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 63479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 179 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 63539 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC AACTTCAACA 239 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 63599 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 299 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 63659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 359 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 63719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 419 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 63779 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 479 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 63839 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 539 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 63899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 599 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 63959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 659 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGTGAAAT GATCACACAA 64019 |||||||||| |||||||||| |||||||||| ||||||| || | ||||||| |||||||||| CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCNGTGAAAT GATCACACAA 719 AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTC 64067 |||||||||| |||||||| | |||||||||| |||||||||| |||||||| AACACAGGCC TTACCCGC-A ATTGTTATCA AACAGTGACT CATTTGTC 766 hqPGS_C01HBa0163B20.1+_SGN-E334024+ (63300 64067) ******************************************************************************** EST sequence 57 +strand 691 n (File: SGN-E332090+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG T Predicted gene structure (within gDNA segment 62700 to 64601): Exon 1 63300 63991 ( 692 n); cDNA 1 691 ( 691 n); score: 0.996 MATCH C01HBa0163B20.1+ SGN-E332090+ 0.996 692 1.001 C PGS_C01HBa0163B20.1+_SGN-E332090+ (63300 63991) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 63359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA 63419 |||||||||| ||||||||| |||||||||| |||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCAT- AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 119 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 63479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 179 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 63539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 239 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 63599 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 299 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 63659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 359 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 63719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 419 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 63779 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 479 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 63839 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 539 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 63899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 599 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 63959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 659 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GT 63991 |||||||||| |||||||||| |||||||||| || CGGGAGCTGA GTAGCAATGC TCTTTCCATG GT 691 hqPGS_C01HBa0163B20.1+_SGN-E332090+ (63300 63991) ******************************************************************************** EST sequence 8 +strand 466 n (File: SGN-E331435+) 1 CAGCCTTCAA TAAAACCCCT CTGAGGTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCT Predicted gene structure (within gDNA segment 62700 to 64376): Exon 1 63300 63766 ( 467 n); cDNA 1 466 ( 466 n); score: 0.991 MATCH C01HBa0163B20.1+ SGN-E331435+ 0.991 467 1.002 C PGS_C01HBa0163B20.1+_SGN-E331435+ (63300 63766) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 63359 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGGTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA 63419 |||||||||| ||||||||| |||||||||| |||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCAT- AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 119 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 63479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 179 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 63539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 239 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 63599 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 299 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 63659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 359 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 63719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 419 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCT 63766 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCT 466 hqPGS_C01HBa0163B20.1+_SGN-E331435+ (63300 63766) ******************************************************************************** EST sequence 97 +strand 746 n (File: SGN-E332545+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 661 GGAGCTGAGT AGCAATGCTC TTTTCATGGT CAANCACTTT GGTGAAATGA TCACACAAAA 721 CACAGGCCTT ACCCGCAAAT TGTTAT Predicted gene structure (within gDNA segment 62701 to 64657): Exon 1 63301 64047 ( 747 n); cDNA 1 746 ( 746 n); score: 0.992 MATCH C01HBa0163B20.1+ SGN-E332545+ 0.992 747 1.001 C PGS_C01HBa0163B20.1+_SGN-E332545+ (63301 64047) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 63360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 63420 |||||||||| |||||||| | |||||||||| ||||||| | |||||||||| |||||||||| ATAGGGAACT CCCCCCAT-A AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 119 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 63480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 179 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 63540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 239 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 63600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 299 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 63660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 359 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 63720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 419 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 63780 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 479 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 63840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 539 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 63900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 599 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 63960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 659 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT TGGTGAAATG ATCACACAAA 64020 |||||||||| |||||||||| |||| ||||| |||| |||| |||||||||| |||||||||| GGGAGCTGAG TAGCAATGCT CTTTTCATGG TCAANCACTT TGGTGAAATG ATCACACAAA 719 ACACAGGCCT TACCCGCAAA TTGTTAT 64047 |||||||||| |||||||||| ||||||| ACACAGGCCT TACCCGCAAA TTGTTAT 746 hqPGS_C01HBa0163B20.1+_SGN-E332545+ (63301 64047) ******************************************************************************** EST sequence 68 +strand 742 n (File: SGN-E331950+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CCGTGAAATG ATCACACAAA 721 ACACAGGCCT TACCCGCAAA TT Predicted gene structure (within gDNA segment 62701 to 64652): Exon 1 63301 64042 ( 742 n); cDNA 1 742 ( 742 n); score: 0.989 MATCH C01HBa0163B20.1+ SGN-E331950+ 0.989 742 1.000 C PGS_C01HBa0163B20.1+_SGN-E331950+ (63301 64042) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 63360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 63420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 120 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 63480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 180 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 63540 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 240 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 63600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 300 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 63660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 360 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 63720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 420 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 63780 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 480 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 63840 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 540 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 63900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 600 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 63960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||| | TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 660 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT TGGTGAAATG ATCACACAAA 64020 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| |||||||||| GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CCGTGAAATG ATCACACAAA 720 ACACAGGCCT TACCCGCAAA TT 64042 |||||||||| |||||||||| || ACACAGGCCT TACCCGCAAA TT 742 hqPGS_C01HBa0163B20.1+_SGN-E331950+ (63301 64042) ******************************************************************************** EST sequence 136 +strand 715 n (File: SGN-E334152+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT TGGGTGAAAT GATCA Predicted gene structure (within gDNA segment 62701 to 64733): Exon 1 63301 64014 ( 714 n); cDNA 1 715 ( 715 n); score: 0.989 MATCH C01HBa0163B20.1+ SGN-E334152+ 0.989 714 0.999 C PGS_C01HBa0163B20.1+_SGN-E334152+ (63301 64014) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 63360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 63420 |||||||||| |||||||| | |||||||||| ||||||| | |||||||||| |||||||||| ATAGGGAACT CCCCCCAT-A AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 119 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 63480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 179 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 63540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 239 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 63600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 299 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 63660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 359 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 63720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 419 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 63780 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 479 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 63840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 539 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 63900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 599 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 63960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 659 -GGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TT-GGTGAAA TGATCA 64014 ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||| GGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGGTGAAA TGATCA 715 hqPGS_C01HBa0163B20.1+_SGN-E334152+ (63301 64014) ******************************************************************************** EST sequence 162 +strand 712 n (File: SGN-E334584+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACACCCGG 661 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AAACACTTTG GTGAAATGAT CA Predicted gene structure (within gDNA segment 62701 to 64624): Exon 1 63301 64014 ( 714 n); cDNA 1 712 ( 712 n); score: 0.992 MATCH C01HBa0163B20.1+ SGN-E334584+ 0.992 714 1.003 C PGS_C01HBa0163B20.1+_SGN-E334584+ (63301 64014) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 63360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 63420 |||||||||| |||||||| | |||||||||| ||||||| | |||||||||| |||||||||| ATAGGGAACT CCCCCCAT-A AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 119 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 63480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 179 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 63540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 239 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 63600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 299 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 63660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 359 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 63720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 419 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 63780 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 479 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 63840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 539 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 63900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 599 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 63960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTA-CACCC 658 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT TGGTGAAATG ATCA 64014 |||||||||| |||||||||| |||||||||| |||| |||| |||||||||| |||| GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAAACACTT TGGTGAAATG ATCA 712 hqPGS_C01HBa0163B20.1+_SGN-E334584+ (63301 64014) ******************************************************************************** EST sequence 66 +strand 677 n (File: SGN-E332023+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 661 GGAGCTGAGT AGCAATG Predicted gene structure (within gDNA segment 62701 to 64588): Exon 1 63301 63978 ( 678 n); cDNA 1 677 ( 677 n); score: 0.996 MATCH C01HBa0163B20.1+ SGN-E332023+ 0.996 678 1.001 C PGS_C01HBa0163B20.1+_SGN-E332023+ (63301 63978) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 63360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 63420 |||||||||| |||||||| | |||||||||| ||||||| | |||||||||| |||||||||| ATAGGGAACT CCCCCCAT-A AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 119 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 63480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 179 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 63540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 239 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 63600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 299 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 63660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 359 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 63720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 419 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 63780 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 479 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 63840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 539 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 63900 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 599 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 63960 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 659 GGGAGCTGAG TAGCAATG 63978 |||||||||| |||||||| GGGAGCTGAG TAGCAATG 677 hqPGS_C01HBa0163B20.1+_SGN-E332023+ (63301 63978) ******************************************************************************** EST sequence 94 +strand 465 n (File: SGN-E332788+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCT Predicted gene structure (within gDNA segment 62701 to 64376): Exon 1 63301 63766 ( 466 n); cDNA 1 465 ( 465 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E332788+ 0.994 466 1.002 C PGS_C01HBa0163B20.1+_SGN-E332788+ (63301 63766) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 63360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 63420 |||||||||| |||||||| | |||||||||| ||||||| | |||||||||| |||||||||| ATAGGGAACT CCCCCCAT-A AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 119 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 63480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 179 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 63540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 239 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 63600 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 299 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 63660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 359 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 63720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 419 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCT 63766 |||||||||| |||||||||| |||||||||| |||||||||| |||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCT 465 hqPGS_C01HBa0163B20.1+_SGN-E332788+ (63301 63766) ******************************************************************************** EST sequence 189 +strand 666 n (File: SGN-E330458+) 1 GCCTTCAATA AAACCCCTCT GAGTTCTTCA CTTACAAGAA GAACCATAGG GGTTGTTTCA 61 TAGGGAACTC CCCCCATAAA AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG 121 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 181 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 241 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 301 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 361 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 421 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 481 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 541 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 601 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 661 GAGCTG Predicted gene structure (within gDNA segment 62702 to 64578): Exon 1 63302 63968 ( 667 n); cDNA 1 666 ( 666 n); score: 0.996 MATCH C01HBa0163B20.1+ SGN-E330458+ 0.996 667 1.002 C PGS_C01HBa0163B20.1+_SGN-E330458+ (63302 63968) Alignment (genomic DNA sequence = upper lines): GCCTTCAATA AAACCCCTCT GAGTTCTTCA CTTACAAGAA GAACCATAGG GGTTGTTTCA 63361 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTTCAATA AAACCCCTCT GAGTTCTTCA CTTACAAGAA GAACCATAGG GGTTGTTTCA 60 TAGGGAACTC CCCCCATAAA AAAAAATCCA AAAAAACAAA AAAACCAAAA AAATGACAAA 63421 |||||||||| ||||||| || |||||||||| |||||| || |||||||||| |||||||||| TAGGGAACTC CCCCCAT-AA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 119 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 63481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 179 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 63541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 239 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 63601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 299 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 63661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 359 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 63721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 419 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 63781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 479 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 63841 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 539 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 63901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 599 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 63961 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 659 GGAGCTG 63968 ||||||| GGAGCTG 666 hqPGS_C01HBa0163B20.1+_SGN-E330458+ (63302 63968) ******************************************************************************** EST sequence 197 +strand 640 n (File: SGN-E330049+) 1 CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 61 AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 121 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 181 TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 241 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 301 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 361 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 421 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 481 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 541 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 601 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA Predicted gene structure (within gDNA segment 62703 to 64553): Exon 1 63303 63943 ( 641 n); cDNA 1 640 ( 640 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E330049+ 0.995 641 1.002 C PGS_C01HBa0163B20.1+_SGN-E330049+ (63303 63943) Alignment (genomic DNA sequence = upper lines): CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 63362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 60 AGGGAACTCC CCCCATAAAA AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG 63422 |||||||||| |||||| ||| |||||||||| ||||| ||| |||||||||| |||||||||| AGGGAACTCC CCCCAT-AAA AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG 119 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 63482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 179 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 63542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 239 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 63602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 299 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 63662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 359 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 63722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 419 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 63782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 479 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 63842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 539 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 63902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 599 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA A 63943 |||||||||| |||||||||| |||||||||| |||||||||| | ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA A 640 hqPGS_C01HBa0163B20.1+_SGN-E330049+ (63303 63943) ******************************************************************************** EST sequence 193 +strand 576 n (File: SGN-E330071+) 1 CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 61 AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 121 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 181 TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 241 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 301 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 361 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 421 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 481 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 541 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATG Predicted gene structure (within gDNA segment 62703 to 64489): Exon 1 63303 63879 ( 577 n); cDNA 1 576 ( 576 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E330071+ 0.995 577 1.002 C PGS_C01HBa0163B20.1+_SGN-E330071+ (63303 63879) Alignment (genomic DNA sequence = upper lines): CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 63362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 60 AGGGAACTCC CCCCATAAAA AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG 63422 |||||||||| |||||| ||| |||||||||| ||||| ||| |||||||||| |||||||||| AGGGAACTCC CCCCAT-AAA AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG 119 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 63482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 179 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 63542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 239 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 63602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 299 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 63662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 359 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 63722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 419 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 63782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 479 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 63842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 539 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATG 63879 |||||||||| |||||||||| |||||||||| ||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATG 576 hqPGS_C01HBa0163B20.1+_SGN-E330071+ (63303 63879) ******************************************************************************** EST sequence 42 +strand 875 n (File: SGN-E378573+) 1 TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGNG TTGTTTCATA 61 GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 121 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 181 TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT TCAACAAAGT 241 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 301 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 361 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 421 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 481 GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 541 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 601 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACCCGGG 661 AGCTAAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 721 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAACCGTA 781 AGCTCCTTCA ATTTCTGCCT CCAGNCTAAT GCTGTGGGTT CTGCCAGTGG AGGCGGACAA 841 TANCAGACCA TTCAGGAAGC ACTTTCAGCT GTCCC Predicted gene structure (within gDNA segment 62705 to 64889): Exon 1 63305 64180 ( 876 n); cDNA 1 875 ( 875 n); score: 0.973 MATCH C01HBa0163B20.1+ SGN-E378573+ 0.973 876 1.001 C PGS_C01HBa0163B20.1+_SGN-E378573+ (63305 64180) Alignment (genomic DNA sequence = upper lines): TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGG-G TTGTTTCATA 63363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGNG TTGTTTCATA 60 GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA ATGACAAAGA 63423 |||||||||| |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 120 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 63483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 180 TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 63543 |||||||||| |||||||||| ||||| | | |||||||||| |||||||||| |||||||||| TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT TCAACAAAGT 240 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 63603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 300 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 63663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 360 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 63723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 420 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 63783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 480 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 63843 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 540 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 63903 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 600 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGT ACCACCCGGG 63963 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACCCGGG 660 AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAACTTTGG TGAAATGATC ACACAAAACA 64023 |||| ||||| |||||||||| |||||||||| ||| ||| || |||||||||| |||||||||| AGCTAAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 720 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCT AGTAACCGTA 64083 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAACCGTA 780 AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTACCAGT GGAGGCGGAC 64143 ||||||||| |||||||||| ||| || ||| ||||||||| |||| ||||| |||||||||| AGCTCCTTC- AATTTCTGCC TCC-AGNCTA ATGCTGTGGG TTCTGCCAGT GGAGGCGGAC 838 AATACAAGAC CATTCAGGAA GCACTTCAAG CTGTCCC 64180 |||| |||| |||||||||| |||||| || ||||||| AATANCAGAC CATTCAGGAA GCACTTTCAG CTGTCCC 875 hqPGS_C01HBa0163B20.1+_SGN-E378573+ (63305 64180) ******************************************************************************** EST sequence 168 +strand 823 n (File: SGN-E334554+) 1 TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 61 GGAACTCCCC CCATAAAAAA AATCCAAAAA AATCAAAAAA CCAAAAAAAT GACAAAGAAG 121 GTGGTAATTG GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC 181 ACCCTGACTA AACATGATTC TGATACATCA TCAAATGGAG TTGCAACTTC AACAAAGTCA 241 GTTGAATCTA TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA 301 GCAAAGAATG TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA 361 GACATCAAGA ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC 421 ACCAAAGACG CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG 481 GGCTCTATCG CTAGGATTGA GAACTTTGAT TTCTCAAAGA TGAAGGATAT AGTGGATGAC 541 CTCAAGTCAT GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC 601 AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC CACCCGGGAA 661 GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT GAAATGATCA CACAAAACAC 721 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 781 GCTCCTTCAA ATTTCTGCCT CAAGCCTAAT GCTGTGGTTT CTA Predicted gene structure (within gDNA segment 62705 to 64738): Exon 1 63305 64128 ( 824 n); cDNA 1 823 ( 823 n); score: 0.992 MATCH C01HBa0163B20.1+ SGN-E334554+ 0.992 824 1.001 C PGS_C01HBa0163B20.1+_SGN-E334554+ (63305 64128) Alignment (genomic DNA sequence = upper lines): TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 63364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 60 GGAACTCCCC CCATAAAAAA AAATCCAAAA AAACAAAAAA ACCAAAAAAA TGACAAAGAA 63424 |||||||||| |||| ||||| |||||||||| ||| ||||| |||||||||| |||||||||| GGAACTCCCC CCAT-AAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA 119 GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 63484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 179 CACCCTGACT AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT CAACAAAGTC 63544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCCTGACT AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT CAACAAAGTC 239 AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 63604 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 299 AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 63664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 359 AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 63724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 419 CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 63784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 479 GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAAGGATA TAGTGGATGA 63844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAAGGATA TAGTGGATGA 539 CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 63904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 599 CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGTA CCACCCGGG- 63963 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGTA CCACCCGGGA 659 AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAACTTTGG TGAAATGATC ACACAAAACA 64023 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAACTTTGG TGAAATGATC ACACAAAACA 719 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCT AGTAACCGTA 64083 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCT AGTAACCGTA 779 AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTA 64128 |||||||||| |||||||||| | |||||||| |||||||||| ||||| AGCTCCTTCA AATTTCTGCC T-CAAGCCTA ATGCTGTGGT TTCTA 823 hqPGS_C01HBa0163B20.1+_SGN-E334554+ (63305 64128) ******************************************************************************** EST sequence 44 +strand 653 n (File: SGN-E374064+) 1 TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 61 GGAACTCCCC CCATAAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA 121 GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 181 CACCCTGACT AAACATGATT CTGACCCTTC ATCAAATGGA GTTGCAACTT CAACAAAGTC 241 AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 301 AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 361 AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 421 CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 481 GGGCTCTGTC GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA TAGTGGATGA 541 CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 601 CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGCA CCA Predicted gene structure (within gDNA segment 62705 to 64612): Exon 1 63305 63957 ( 653 n); cDNA 1 653 ( 653 n); score: 0.988 MATCH C01HBa0163B20.1+ SGN-E374064+ 0.988 653 1.000 C PGS_C01HBa0163B20.1+_SGN-E374064+ (63305 63957) Alignment (genomic DNA sequence = upper lines): TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 63364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 60 GGAACTCCCC CCATAAAAAA AAATCCAAAA AAACAAAAAA ACCAAAAAAA TGACAAAGAA 63424 |||||||||| |||||||||| |||||||||| ||| ||||| |||||||||| |||||||||| GGAACTCCCC CCATAAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA 120 GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 63484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 180 CACCCTGACT AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT CAACAAAGTC 63544 |||||||||| |||||||||| |||| | || |||||||||| |||||||||| |||||||||| CACCCTGACT AAACATGATT CTGACCCTTC ATCAAATGGA GTTGCAACTT CAACAAAGTC 240 AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 63604 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 300 AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 63664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 360 AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 63724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 420 CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 63784 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 480 GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAAGGATA TAGTGGATGA 63844 ||||||| || |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| GGGCTCTGTC GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA TAGTGGATGA 540 CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 63904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 600 CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGTA CCA 63957 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ||| CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGCA CCA 653 hqPGS_C01HBa0163B20.1+_SGN-E374064+ (63305 63957) ******************************************************************************** EST sequence 133 +strand 702 n (File: SGN-E333363+) 1 CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT CATAGGGAAC TCCCCCCATA 61 AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA AGAAGGTGGT AATTGGTGGA 121 ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT GTGTCACCCT GACTAAACAT 181 GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA AGTCAGTTGA ATCTATGTGT 241 CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT CCGCAGCAAA GAATGTGTCC 301 GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG TGGCAGACAT CAAGAATGCC 361 ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC CTTACACCAA AGACGCTCTC 421 CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC TAAGGGGCTC TATCGCTAGG 481 ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT 541 AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT 601 GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCG GGGAGCTGAG TAGCAATGGC 661 TCTTCCATGG TCANCAACTT TGGTGAAATG ATCACACAAA AC Predicted gene structure (within gDNA segment 62720 to 64632): Exon 1 63320 64022 ( 703 n); cDNA 1 702 ( 702 n); score: 0.987 MATCH C01HBa0163B20.1+ SGN-E333363+ 0.987 703 1.001 C PGS_C01HBa0163B20.1+_SGN-E333363+ (63320 64022) Alignment (genomic DNA sequence = upper lines): CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT CATAGGGAAC TCCCCCCATA 63379 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT CATAGGGAAC TCCCCCCAT- 59 AAAAAAAATC CAAAAAAACA AAAAAACCAA AAAAATGACA AAGAAGGTGG TAATTGGTGG 63439 |||||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA AAGAAGGTGG TAATTGGTGG 119 AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC TGTGTCACCC TGACTAAACA 63499 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC TGTGTCACCC TGACTAAACA 179 TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA AAGTCAGTTG AATCTATGTG 63559 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA AAGTCAGTTG AATCTATGTG 239 TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC TCCGCAGCAA AGAATGTGTC 63619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC TCCGCAGCAA AGAATGTGTC 299 CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT GTGGCAGACA TCAAGAATGC 63679 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT GTGGCAGACA TCAAGAATGC 359 CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT CCTTACACCA AAGACGCTCT 63739 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT CCTTACACCA AAGACGCTCT 419 CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA CTAAGGGGCT CTATCGCTAG 63799 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA CTAAGGGGCT CTATCGCTAG 479 GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG GATGACCTCA AGTCATGGCT 63859 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG GATGACCTCA AGTCATGGCT 539 TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT TTCACCAAAT CAGAATACAG 63919 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT TTCACCAAAT CAGAATACAG 599 TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC CGGGAGCTGA GTAGCAATGC 63979 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||||| TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC GGGGAGCTGA GTAGCAATGG 659 TCTTTCCATG GTCAACAACT TTGGTGAAAT GATCACACAA AAC 64022 ||||||| |||| ||||| |||||||||| |||||||||| ||| CTCTTCCATG GTCANCAACT TTGGTGAAAT GATCACACAA AAC 702 hqPGS_C01HBa0163B20.1+_SGN-E333363+ (63320 64022) ******************************************************************************** EST sequence 89 +strand 550 n (File: SGN-E332731+) 1 TTCACTTACA AGAAGAACCA TACGGGTTGT TTCATACGGA ACTCCCCCCA TAATAAAAAT 61 CCAAAAAAAT CCAAAAACCA AAAAAATGAC AAAGAAGGTG GTAATTGGCG GAATAGCTTC 121 TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC CTGTGTCACC CTGACTAAAC ATGATTCTGA 181 TACATCATCA AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC 241 ACCATACAAA CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA 301 GGACTACATC AATGTTGCAT TCCAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA 361 CACTGAGCCA GTTAAGAAAG CTGCCAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG 421 TGAAGAGGTG TTTGATCTAC CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 481 CTTTGATTTC TCAAGATGAA GGATATAGTG GATGACCTCG AGTCATGGCT TAGCGCTGTC 541 GTTGCTTATG Predicted gene structure (within gDNA segment 62728 to 64489): Exon 1 63328 63879 ( 552 n); cDNA 1 550 ( 550 n); score: 0.976 MATCH C01HBa0163B20.1+ SGN-E332731+ 0.976 552 1.004 C PGS_C01HBa0163B20.1+_SGN-E332731+ (63328 63879) Alignment (genomic DNA sequence = upper lines): TTCACTTACA AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAA 63387 |||||||||| |||||||||| || ||||||| |||||| ||| |||||||||| | || ||||| TTCACTTACA AGAAGAACCA TACGGGTTGT TTCATACGGA ACTCCCCCCA T-AATAAAAA 59 TCCAAAAAAA CAAAAAAACC AAAAAAATGA CAAAGAAGGT GGTAATTGGT GGAATAGCTT 63447 |||||||||| ||||||| |||||||||| |||||||||| ||||||||| |||||||||| TCCAAAAAAA TCCAAAAACC AAAAAAATGA CAAAGAAGGT GGTAATTGGC GGAATAGCTT 119 CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG CCTGTGTCAC CCTGACTAAA CATGATTCTG 63507 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG CCTGTGTCAC CCTGACTAAA CATGATTCTG 179 ATACATCATC AAATGGAGTT GCAACTTCAA CAAAGTCAGT TGAATCTATG TGTCAACCCA 63567 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACATCATC AAATGGAGTT GCAACTTCAA CAAAGTCAGT TGAATCTATG TGTCAACCCA 239 CACCATACAA ACAAACTTGT GAAAAGACCC TCTCCGCAGC AAAGAATGTG TCCGATCCAA 63627 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCATACAA ACAAACTTGT GAAAAGACCC TCTCCGCAGC AAAGAATGTG TCCGATCCAA 299 AGGACTACAT CAAGGTTGCA TTCGAAGCCA CTGTGGCAGA CATCAAGAAT GCCATCAAGA 63687 |||||||||| ||| |||||| ||| |||||| |||||||||| |||||||||| |||||||||| AGGACTACAT CAATGTTGCA TTCCAAGCCA CTGTGGCAGA CATCAAGAAT GCCATCAAGA 359 ACACTGAGCC AGTTAAGAAA GCTGCCAGTG ATCCTTACAC CAAAGACGCT CTCCTTGCTT 63747 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACTGAGCC AGTTAAGAAA GCTGCCAGTG ATCCTTACAC CAAAGACGCT CTCCTTGCTT 419 GTGAAGAGGT GTTTGATCTA GCCGTTGAGG AACTAAGGGG CTCTATCGCT AGGATTGAGA 63807 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTGAAGAGGT GTTTGATCTA CCCGTTGAGG AACTAAGGGG CTCTATCGCT AGGATTGAGA 479 ACTTTGATTT CTCAAAGATG AAGGATATAG TGGATGACCT CAAGTCATGG CTTAGCGCTG 63867 |||||||||| ||| |||||| |||||||||| |||||||||| | |||||||| |||||||||| ACTTTGATTT CTC-AAGATG AAGGATATAG TGGATGACCT CGAGTCATGG CTTAGCGCTG 538 TCGTTGCTTA TG 63879 |||||||||| || TCGTTGCTTA TG 550 hqPGS_C01HBa0163B20.1+_SGN-E332731+ (63328 63879) ******************************************************************************** EST sequence 165 +strand 653 n (File: SGN-E334715+) 1 AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAA TCCAAAAAAA 61 CAAAAAAAAC CAAAAAAATG ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG 121 TGGTGGCTTG TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT 181 CAAATGGAGT TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA 241 AACAAACTTG TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA 301 TCAAGGTTGC ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC 361 CAGTTAAGAA AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG 421 TGTTTGATCT AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT 481 TCTCTAAGAT GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT 541 ATGAAGAGAC TTGTTTAGAT GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA 601 TGATGAAGCT AATGAGCACC ACTCGGGAGC TGAGTAGCAA TGCTCTTTCC ATG Predicted gene structure (within gDNA segment 62738 to 64599): Exon 1 63338 63989 ( 652 n); cDNA 1 653 ( 653 n); score: 0.988 MATCH C01HBa0163B20.1+ SGN-E334715+ 0.988 652 0.998 C PGS_C01HBa0163B20.1+_SGN-E334715+ (63338 63989) Alignment (genomic DNA sequence = upper lines): AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAA TCCAAAAAAA 63397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAA TCCAAAAAAA 60 CAAAAAAA-C CAAAAAAATG ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG 63456 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAAAAAC CAAAAAAATG ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG 120 TGGTGGCTTG TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACATCAT 63516 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| TGGTGGCTTG TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT 180 CAAATGGAGT TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA 63576 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATGGAGT TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA 240 AACAAACTTG TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA 63636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAAACTTG TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA 300 TCAAGGTTGC ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC 63696 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGTTGC ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC 360 CAGTTAAGAA AGCTGCCAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG 63756 |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTAAGAA AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG 420 TGTTTGATCT AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT 63816 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTGATCT AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT 480 TCTCAAAGAT GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT 63876 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCTAAGAT GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT 540 ATGAAGAGAC TTGTTTAGAT GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA 63936 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGAGAC TTGTTTAGAT GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA 600 TGATGAAGCT AATGAGTACC ACCCGGGAGC TGAGTAGCAA TGCTCTTTCC ATG 63989 |||||||||| |||||| ||| || ||||||| |||||||||| |||||||||| ||| TGATGAAGCT AATGAGCACC ACTCGGGAGC TGAGTAGCAA TGCTCTTTCC ATG 653 hqPGS_C01HBa0163B20.1+_SGN-E334715+ (63338 63989) ******************************************************************************** EST sequence 205 +strand 767 n (File: SGN-E546809+) 1 AGGGAACTCC CCCCATTAAA AAAATCCAAA AAAATCAAAA AAACCAAAAA AATGACAAAG 61 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 121 GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG GAGTTGCAAC TTCAACAAAG 181 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 241 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 301 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 361 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 421 AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 481 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 541 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACCCGG 601 GAGCTAAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 661 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAACCGT 721 AAGCTCCTTT CAATTTCTGC CTCCAAGCCT AATGCTGTGG GTTCTGC Predicted gene structure (within gDNA segment 62763 to 64802): Exon 1 63363 64127 ( 765 n); cDNA 1 765 ( 765 n); score: 0.976 MATCH C01HBa0163B20.1+ SGN-E546809+ 0.976 765 0.997 C PGS_C01HBa0163B20.1+_SGN-E546809+ (63363 64127) Alignment (genomic DNA sequence = upper lines): AGGGAACTCC CCCCATAAAA AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG 63422 |||||||||| |||||| ||| |||| | || |||| ||||| |||||||||| |||||||||| AGGGAACTCC CCCCATTAAA AAAATCCAAA AAAATCAAAA AAACCAAAAA AATGACAAAG 60 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 63482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 120 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 63542 |||||||||| |||||||||| |||||| | |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG GAGTTGCAAC TTCAACAAAG 180 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 63602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 240 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 63662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 300 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 63722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 360 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 63782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 420 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 63842 ||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 480 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 63902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 540 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 63962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACCCGG 600 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 64022 ||||| |||| |||||||||| |||||||||| |||| ||| | |||||||||| |||||||||| GAGCTAAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 660 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 64082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAACCGT 720 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCT 64127 ||||||||| ||||||||| |||||||||| |||||||||| |||| AAGCTCCTTT CAATTTCTGC CTCCAAGCCT AATGCTGTGG GTTCT 765 hqPGS_C01HBa0163B20.1+_SGN-E546809+ (63363 64127) ******************************************************************************** EST sequence 82 +strand 542 n (File: SGN-E332238+) 1 CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA GTCAAACAAG GTGGTAATTG 61 GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 121 AACATGATTC TGATACATCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 181 TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 241 TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 301 ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 361 CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTATCG 421 CTAGGATTGA GAACTTTGAT TTCTCAAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 481 GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 541 AC Predicted gene structure (within gDNA segment 62353 to 64527): Exon 1 63374 63917 ( 544 n); cDNA 1 542 ( 542 n); score: 0.989 MATCH C01HBa0163B20.1+ SGN-E332238+ 0.989 544 1.004 C PGS_C01HBa0163B20.1+_SGN-E332238+ (63374 63917) Alignment (genomic DNA sequence = upper lines): CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT 63433 ||||| |||| |||||||||| |||| |||| |||||||||| | | |||| | |||||||||| CCCAT-AAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA A-GTCAAACA AGGTGGTAAT 58 TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC 63493 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC 118 TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC 63553 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC 178 TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA 63613 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA 238 TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA 63673 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA 298 GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA 63733 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA 358 CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTAT 63793 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTAT 418 CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC 63853 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC 478 ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA 63913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA 538 ATAC 63917 |||| ATAC 542 hqPGS_C01HBa0163B20.1+_SGN-E332238+ (63374 63917) ******************************************************************************** EST sequence 178 +strand 640 n (File: SGN-E329360+) 1 AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG AAGGTGGTAA TTGGTGGAAT 61 AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT GTCACCCTGA CTAAACATGA 121 TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA 181 ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA 241 TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT 301 CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT TACACCAAAG ACGCTCTCCT 361 TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA AGGGGCTCTA TCGCTAGGAT 421 TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT GACCTCAAGT CATGGCTTAG 481 CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC ACCAAATCAG AATACAGTGC 541 AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG GAGCTGAGTA GCAATGCTCT 601 TTCCATGGTC AACAACTTCG GTGAAATGAT CACACAAAAC Predicted gene structure (within gDNA segment 62783 to 64632): Exon 1 63383 64022 ( 640 n); cDNA 1 640 ( 640 n); score: 0.991 MATCH C01HBa0163B20.1+ SGN-E329360+ 0.991 640 1.000 C PGS_C01HBa0163B20.1+_SGN-E329360+ (63383 64022) Alignment (genomic DNA sequence = upper lines): AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG AAGGTGGTAA TTGGTGGAAT 63442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG AAGGTGGTAA TTGGTGGAAT 60 AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT GTCACCCTGA CTAAACATGA 63502 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT GTCACCCTGA CTAAACATGA 120 TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA 63562 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA 180 ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA 63622 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA 240 TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT 63682 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT 300 CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT TACACCAAAG ACGCTCTCCT 63742 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT TACACCAAAG ACGCTCTCCT 360 TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA AGGGGCTCTA TCGCTAGGAT 63802 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA AGGGGCTCTA TCGCTAGGAT 420 TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT GACCTCAAGT CATGGCTTAG 63862 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT GACCTCAAGT CATGGCTTAG 480 CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC ACCAAATCAG AATACAGTGC 63922 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC ACCAAATCAG AATACAGTGC 540 AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG GAGCTGAGTA GCAATGCTCT 63982 |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG GAGCTGAGTA GCAATGCTCT 600 TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 64022 |||||||||| |||||||| | |||||||||| |||||||||| TTCCATGGTC AACAACTTCG GTGAAATGAT CACACAAAAC 640 hqPGS_C01HBa0163B20.1+_SGN-E329360+ (63383 64022) ******************************************************************************** EST sequence 208 +strand 735 n (File: SGN-E546845+) 1 AAAATCAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC 61 TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT 121 CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT 181 ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT 241 ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG 301 AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG 361 AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG 421 ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG 481 CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG 541 AAATGATGAA GCTAATGAGC ACCACCCGGG AGCTAAGTAG CAATGCTCTT TCCATGGTCA 601 ACAGCTTCGG TGAAATGATC ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA 661 GTGACTCATT TGTCGAAGCC AGTAACCGTA AGCTCCCTTC AATTTCTGCC TCCAAGCCTA 721 TGCTGTGGTT TCTGC Predicted gene structure (within gDNA segment 62740 to 65089): Exon 1 63394 64127 ( 734 n); cDNA 1 733 ( 733 n); score: 0.978 MATCH C01HBa0163B20.1+ SGN-E546845+ 0.978 734 0.999 C PGS_C01HBa0163B20.1+_SGN-E546845+ (63394 64127) Alignment (genomic DNA sequence = upper lines): AAAACAAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC 63453 |||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATCAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC 60 TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACAT 63513 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| | | TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT 120 CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT 63573 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT 180 ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT 63633 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT 240 ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG 63693 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG 300 AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG 63753 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG 360 AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTAT CGCTAGGATT GAGAACTTTG 63813 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG 420 ATTTCTCAAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG 63873 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG 480 CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG 63933 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG 540 AAATGATGAA GCTAATGAGT ACCACCCGGG AGCTGAGTAG CAATGCTCTT TCCATGGTCA 63993 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| AAATGATGAA GCTAATGAGC ACCACCCGGG AGCTAAGTAG CAATGCTCTT TCCATGGTCA 600 ACAACTTTGG TGAAATGATC ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA 64053 ||| ||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCTTCGG TGAAATGATC ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA 660 GTGACTCATT TGTCGAAGCT AGTAACCGTA AGCTCCTTCA AATTTCTGCC TCCAAGCCTA 64113 |||||||||| ||||||||| |||||||||| |||||| | |||||||||| ||||||||| GTGACTCATT TGTCGAAGCC AGTAACCGTA AGCTCCCTTC AATTTCTGCC TCCAAGCCT- 719 ATGCTGTGGT TTCT 64127 |||||||||| |||| ATGCTGTGGT TTCT 733 hqPGS_C01HBa0163B20.1+_SGN-E546845+ (63394 64127) ******************************************************************************** EST sequence 74 +strand 722 n (File: SGN-E331929+) 1 AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 61 GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC 121 AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 181 AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GGCTACATCA AGGTTGCATT 241 CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 301 TGCTAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 361 CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA 421 GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 481 TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 541 GAGCACCACT CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT 601 GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 661 AGCCAGTAAT CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTGC 721 CA Predicted gene structure (within gDNA segment 62810 to 64777): Exon 1 63410 64131 ( 722 n); cDNA 1 722 ( 722 n); score: 0.985 MATCH C01HBa0163B20.1+ SGN-E331929+ 0.985 722 1.000 C PGS_C01HBa0163B20.1+_SGN-E331929+ (63410 64131) Alignment (genomic DNA sequence = upper lines): AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 63469 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 60 GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC 63529 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC 120 AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 63589 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 180 AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT 63649 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GGCTACATCA AGGTTGCATT 240 CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 63709 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 300 TGCCAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 63769 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 360 CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA 63829 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA 420 GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 63889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 480 TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 63949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 540 GAGTACCACC CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGTGAAAT 64009 ||| ||||| |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| GAGCACCACT CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT 600 GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 64069 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 660 AGCTAGTAAC CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTAC 64129 ||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | AGCCAGTAAT CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTGC 720 CA 64131 || CA 722 hqPGS_C01HBa0163B20.1+_SGN-E331929+ (63410 64131) ******************************************************************************** EST sequence 146 +strand 784 n (File: SGN-E333795+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 301 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAAGT GTTTGATCTA GCCGTTGAGG 361 AACTAAGGGG CTCTATCGCT ANGATTGAGA ACTTTGATTT CTCNAAGATG AAGGATATAG 421 TGGATGACCC TCAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 481 GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATGAGTACCA 541 CCCGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 601 AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 661 ACCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC TGTGGTTTCT ACCAGTGGAG 721 GCGGACAATA CNAGACCATT CAGGAAGCAC TTNCAGCTGT CCCCAGAAGC AGTCCAACTC 781 CTTT Predicted gene structure (within gDNA segment 62819 to 64811): Exon 1 63419 64201 ( 783 n); cDNA 1 784 ( 784 n); score: 0.984 MATCH C01HBa0163B20.1+ SGN-E333795+ 0.984 783 0.999 C PGS_C01HBa0163B20.1+_SGN-E333795+ (63419 64201) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 63478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 63538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 63598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 63658 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAA-GA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 63717 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| TGTGGCAGAC ATCAAGAATG CCATCAAGGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 300 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 63777 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAAGT GTTTGATCTA GCCGTTGAGG 360 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 63837 |||||||||| |||||||||| | |||||||| |||||||||| ||| |||||| |||||||||| AACTAAGGGG CTCTATCGCT ANGATTGAGA ACTTTGATTT CTCNAAGATG AAGGATATAG 420 TGGATGACCT CAAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 63897 ||||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATGACCC TCAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 480 GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATGAGTACCA 63957 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATGAGTACCA 540 CCCGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 64017 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 600 AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 64077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 660 ACCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC TGTGGTTTCT ACCAGTGGAG 64137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC TGTGGTTTCT ACCAGTGGAG 720 GCGGACAATA CAAGACCATT CAGGAAGCAC TTCAAGCTGT CCCCAGGAGC AGTCCAACTC 64197 |||||||||| | |||||||| |||||||||| || |||||| |||||| ||| |||||||||| GCGGACAATA CNAGACCATT CAGGAAGCAC TTNCAGCTGT CCCCAGAAGC AGTCCAACTC 780 CTTT 64201 |||| CTTT 784 hqPGS_C01HBa0163B20.1+_SGN-E333795+ (63419 64201) ******************************************************************************** EST sequence 103 +strand 711 n (File: SGN-E332713+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 301 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 361 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 421 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 481 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 541 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 601 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 661 CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCTAATGCTG TGGTTTCTAC C Predicted gene structure (within gDNA segment 62819 to 64740): Exon 1 63419 64130 ( 712 n); cDNA 1 711 ( 711 n); score: 0.999 MATCH C01HBa0163B20.1+ SGN-E332713+ 0.999 712 1.001 C PGS_C01HBa0163B20.1+_SGN-E332713+ (63419 64130) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 63478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 63538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 63598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 63658 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 63718 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 300 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 63778 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 360 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 63838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 420 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 63898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 480 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 63958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 540 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 64018 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 600 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 64078 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 660 CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA CC 64130 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| || CCGTAAGCTC CTTCAAATTT CTGCCTCCAA G-CTAATGCT GTGGTTTCTA CC 711 hqPGS_C01HBa0163B20.1+_SGN-E332713+ (63419 64130) ******************************************************************************** EST sequence 108 +strand 712 n (File: SGN-E332866+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 301 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 361 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 421 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 481 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 541 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 601 AAACACAGGC CTTACCCGCA AATTGTTATN CAACAGTGAC TCATTTGTCG AAGCTAGTAA 661 CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA CC Predicted gene structure (within gDNA segment 62819 to 64740): Exon 1 63419 64130 ( 712 n); cDNA 1 712 ( 712 n); score: 0.997 MATCH C01HBa0163B20.1+ SGN-E332866+ 0.997 712 1.000 C PGS_C01HBa0163B20.1+_SGN-E332866+ (63419 64130) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 63478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 63538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 63598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 63658 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 63718 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 300 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 63778 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 360 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 63838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 420 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 63898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 480 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 63958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 540 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 64018 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 600 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 64078 |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| |||||||||| AAACACAGGC CTTACCCGCA AATTGTTATN CAACAGTGAC TCATTTGTCG AAGCTAGTAA 660 CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA CC 64130 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA CC 712 hqPGS_C01HBa0163B20.1+_SGN-E332866+ (63419 64130) ******************************************************************************** EST sequence 115 +strand 608 n (File: SGN-E333056+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 301 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 361 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 421 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 481 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 541 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAA CTTTGGTGAA ATGATCACAC 601 AAAACACA Predicted gene structure (within gDNA segment 62819 to 64635): Exon 1 63419 64025 ( 607 n); cDNA 1 608 ( 608 n); score: 0.996 MATCH C01HBa0163B20.1+ SGN-E333056+ 0.996 607 0.998 C PGS_C01HBa0163B20.1+_SGN-E333056+ (63419 64025) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 63478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 63538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 63598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 63658 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 63718 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 300 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 63778 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 360 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 63838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 420 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 63898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 480 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 63958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 540 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAAC-AA CTTTGGTGAA ATGATCACAC 64017 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAA CTTTGGTGAA ATGATCACAC 600 AAAACACA 64025 |||||||| AAAACACA 608 hqPGS_C01HBa0163B20.1+_SGN-E333056+ (63419 64025) ******************************************************************************** EST sequence 176 +strand 792 n (File: SGN-E333892+) 1 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 61 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 121 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 181 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 241 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 301 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 361 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 421 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 481 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 541 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 601 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 661 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 721 CAATACAAGA CCATTCAGGA AGCACTTNCA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 781 GTTATCCCTG AT Predicted gene structure (within gDNA segment 62823 to 64869): Exon 1 63423 64213 ( 791 n); cDNA 1 792 ( 792 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E333892+ 0.994 791 0.999 C PGS_C01HBa0163B20.1+_SGN-E333892+ (63423 64213) Alignment (genomic DNA sequence = upper lines): AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 63482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 60 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 63542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 120 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 63602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 180 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 63662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 240 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 63722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 300 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 63782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 360 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 63842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 420 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 63902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 480 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 63962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 540 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 64022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 600 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 64082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 660 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 64142 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 720 CAATACAAGA CCATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 64202 |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| |||||||||| CAATACAAGA CCATTCAGGA AGCACTTNCA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 780 GTTAT-CCTG AT 64213 ||||| |||| || GTTATCCCTG AT 792 hqPGS_C01HBa0163B20.1+_SGN-E333892+ (63423 64213) ******************************************************************************** EST sequence 173 +strand 790 n (File: SGN-E333848+) 1 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 61 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 121 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 181 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 241 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 301 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 361 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 421 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 481 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 541 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 601 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 661 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 721 CAATACAAGA ACATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 781 GTTATCCTGA Predicted gene structure (within gDNA segment 62823 to 64822): Exon 1 63423 64212 ( 790 n); cDNA 1 790 ( 790 n); score: 0.999 MATCH C01HBa0163B20.1+ SGN-E333848+ 0.999 790 1.000 C PGS_C01HBa0163B20.1+_SGN-E333848+ (63423 64212) Alignment (genomic DNA sequence = upper lines): AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 63482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 60 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 63542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 120 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 63602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 180 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 63662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 240 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 63722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 300 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 63782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 360 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 63842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 420 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 63902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 480 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 63962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 540 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 64022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 600 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 64082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 660 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 64142 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 720 CAATACAAGA CCATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 64202 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATACAAGA ACATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 780 GTTATCCTGA 64212 |||||||||| GTTATCCTGA 790 hqPGS_C01HBa0163B20.1+_SGN-E333848+ (63423 64212) ******************************************************************************** EST sequence 127 +strand 708 n (File: SGN-E333232+) 1 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 61 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 121 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 181 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 241 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 301 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 361 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 421 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 481 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 541 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 601 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 661 AAGCTCCTTC AAATTTCTGC CNTCAAGCCT AATGCTGTGG TTTCTACC Predicted gene structure (within gDNA segment 62823 to 64740): Exon 1 63423 64130 ( 708 n); cDNA 1 708 ( 708 n); score: 0.997 MATCH C01HBa0163B20.1+ SGN-E333232+ 0.997 708 1.000 C PGS_C01HBa0163B20.1+_SGN-E333232+ (63423 64130) Alignment (genomic DNA sequence = upper lines): AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 63482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 60 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 63542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 120 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 63602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 180 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 63662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 240 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 63722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 300 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 63782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 360 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 63842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 420 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 63902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 480 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 63962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 540 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 64022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 600 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 64082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 660 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACC 64130 |||||||||| |||||||||| | ||||||| |||||||||| |||||||| AAGCTCCTTC AAATTTCTGC CNTCAAGCCT AATGCTGTGG TTTCTACC 708 hqPGS_C01HBa0163B20.1+_SGN-E333232+ (63423 64130) ******************************************************************************** EST sequence 199 +strand 780 n (File: SGN-E546751+) 1 GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 61 AACATGATTC TGACCCTTCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 121 TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 181 TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 241 ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 301 CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTGTCG 361 CTAGGATTGA GAACTTTGAT TTCTCTAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 421 GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 481 ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC CACCCGGGAG CTAAGTAGCA 541 ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC ACAAAACACA GGCCTTACCC 601 GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG TAACCGTAAG CTCCTTCAAA 661 TTTCTGCCTC CAAGCCTAAT GCTGTGGGTT CTGCCAGTGG AGGCGGACNA TACNAGACCA 721 TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCAAAC TCCTTTCGTT ATCCTGATCA Predicted gene structure (within gDNA segment 62836 to 64825): Exon 1 63436 64215 ( 780 n); cDNA 1 780 ( 780 n); score: 0.981 MATCH C01HBa0163B20.1+ SGN-E546751+ 0.981 780 1.000 C PGS_C01HBa0163B20.1+_SGN-E546751+ (63436 64215) Alignment (genomic DNA sequence = upper lines): GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 63495 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 60 AACATGATTC TGATACATCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 63555 |||||||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||||||||| AACATGATTC TGACCCTTCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 120 TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 63615 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 180 TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 63675 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 240 ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 63735 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 300 CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTATCG 63795 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTGTCG 360 CTAGGATTGA GAACTTTGAT TTCTCAAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 63855 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CTAGGATTGA GAACTTTGAT TTCTCTAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 420 GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 63915 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 480 ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC CACCCGGGAG CTGAGTAGCA 63975 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| || ||||||| ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC CACCCGGGAG CTAAGTAGCA 540 ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC ACAAAACACA GGCCTTACCC 64035 |||||||||| |||||||||| | ||| |||| |||||||||| |||||||||| |||||||||| ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC ACAAAACACA GGCCTTACCC 600 GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG TAACCGTAAG CTCCTTCAAA 64095 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG TAACCGTAAG CTCCTTCAAA 660 TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG AGGCGGACAA TACAAGACCA 64155 |||||||||| |||||||||| ||||||| || || ||||||| |||||||| | ||| |||||| TTTCTGCCTC CAAGCCTAAT GCTGTGGGTT CTGCCAGTGG AGGCGGACNA TACNAGACCA 720 TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC TCCTTTCGTT ATCCTGATCA 64215 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCAAAC TCCTTTCGTT ATCCTGATCA 780 hqPGS_C01HBa0163B20.1+_SGN-E546751+ (63436 64215) ******************************************************************************** EST sequence 84 +strand 414 n (File: SGN-E332772+) 1 TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT CAAATGGAGT 61 TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG 121 TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC 181 ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA 241 AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT 301 AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCTAAGAT 361 GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGA Predicted gene structure (within gDNA segment 62867 to 64490): Exon 1 63467 63880 ( 414 n); cDNA 1 414 ( 414 n); score: 0.993 MATCH C01HBa0163B20.1+ SGN-E332772+ 0.993 414 1.000 C PGS_C01HBa0163B20.1+_SGN-E332772+ (63467 63880) Alignment (genomic DNA sequence = upper lines): TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACATCAT CAAATGGAGT 63526 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT CAAATGGAGT 60 TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG 63586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG 120 TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC 63646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC 180 ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA 63706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA 240 AGCTGCCAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT 63766 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT 300 AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCAAAGAT 63826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCTAAGAT 360 GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGA 63880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGA 414 hqPGS_C01HBa0163B20.1+_SGN-E332772+ (63467 63880) ******************************************************************************** EST sequence 117 +strand 436 n (File: SGN-E326012+) 1 TCCGCAGCAT AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 61 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 121 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 181 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 241 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 301 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 361 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 421 AACACAGGCC TTACCC Predicted gene structure (within gDNA segment 62910 to 64645): Exon 1 63600 64035 ( 436 n); cDNA 1 436 ( 436 n); score: 0.984 MATCH C01HBa0163B20.1+ SGN-E326012+ 0.984 436 1.000 C PGS_C01HBa0163B20.1+_SGN-E326012+ (63600 64035) Alignment (genomic DNA sequence = upper lines): TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 63659 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAT AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 60 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 63719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 120 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 63779 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 180 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 63839 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 240 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 63899 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 300 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 63959 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 360 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAACT TTGGTGAAAT GATCACACAA 64019 |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| |||||||||| CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 420 AACACAGGCC TTACCC 64035 |||||||||| |||||| AACACAGGCC TTACCC 436 hqPGS_C01HBa0163B20.1+_SGN-E326012+ (63600 64035) ******************************************************************************** EST sequence 100 +strand 685 n (File: SGN-E332551+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 601 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGG 661 TGTTTGTGGT GATGGTTTCG TTATG Predicted gene structure (within gDNA segment 63024 to 64998): Exon 1 63705 64388 ( 684 n); cDNA 1 685 ( 685 n); score: 0.980 MATCH C01HBa0163B20.1+ SGN-E332551+ 0.980 684 0.999 C PGS_C01HBa0163B20.1+_SGN-E332551+ (63705 64388) Alignment (genomic DNA sequence = upper lines): AAAGCTGCCA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 63764 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG 63824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 63884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 63944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGTA CCACCCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT 64004 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| || ||| ||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 64064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCTA GTAACCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 64124 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTACCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG 64184 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA 64244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 64304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 600 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTT-GG 64363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGG 660 TGTTTGTGGT GATGGTTTCG TTATG 64388 |||||||||| |||||||||| ||||| TGTTTGTGGT GATGGTTTCG TTATG 685 hqPGS_C01HBa0163B20.1+_SGN-E332551+ (63705 64388) ******************************************************************************** EST sequence 87 +strand 658 n (File: SGN-E332650+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAACG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 601 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG Predicted gene structure (within gDNA segment 63024 to 64972): Exon 1 63705 64362 ( 658 n); cDNA 1 658 ( 658 n); score: 0.982 MATCH C01HBa0163B20.1+ SGN-E332650+ 0.982 658 1.000 C PGS_C01HBa0163B20.1+_SGN-E332650+ (63705 64362) Alignment (genomic DNA sequence = upper lines): AAAGCTGCCA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 63764 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG 63824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 63884 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAACG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 63944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGTA CCACCCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT 64004 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| || ||| ||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 64064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCTA GTAACCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 64124 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTACCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG 64184 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA 64244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 64304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 600 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 64362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 658 hqPGS_C01HBa0163B20.1+_SGN-E332650+ (63705 64362) ******************************************************************************** EST sequence 153 +strand 657 n (File: SGN-E334702+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCAACCAAG ACCATAATCA 601 CCGGTGACCA GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTG Predicted gene structure (within gDNA segment 63024 to 64972): Exon 1 63705 64362 ( 658 n); cDNA 1 657 ( 657 n); score: 0.982 MATCH C01HBa0163B20.1+ SGN-E334702+ 0.982 658 1.002 C PGS_C01HBa0163B20.1+_SGN-E334702+ (63705 64362) Alignment (genomic DNA sequence = upper lines): AAAGCTGCCA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 63764 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG 63824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 63884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 63944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGTA CCACCCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT 64004 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| || ||| ||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 64064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCTA GTAACCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 64124 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTACCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG 64184 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA 64244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 64304 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG G-CCAACCAA GACCATAATC 599 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 64362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 657 hqPGS_C01HBa0163B20.1+_SGN-E334702+ (63705 64362) ******************************************************************************** EST sequence 141 +strand 650 n (File: SGN-E334236+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 601 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC Predicted gene structure (within gDNA segment 63024 to 64964): Exon 1 63705 64354 ( 650 n); cDNA 1 650 ( 650 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E334236+ 0.983 650 1.000 C PGS_C01HBa0163B20.1+_SGN-E334236+ (63705 64354) Alignment (genomic DNA sequence = upper lines): AAAGCTGCCA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 63764 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG 63824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 63884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 63944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGTA CCACCCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT 64004 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| || ||| ||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 64064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCTA GTAACCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 64124 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTACCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG 64184 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA 64244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 64304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 600 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC 64354 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC 650 hqPGS_C01HBa0163B20.1+_SGN-E334236+ (63705 64354) ******************************************************************************** EST sequence 91 +strand 413 n (File: SGN-E332787+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCCGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCCAGCCTAA TGC Predicted gene structure (within gDNA segment 63024 to 64826): Exon 1 63705 64117 ( 413 n); cDNA 1 413 ( 413 n); score: 0.976 MATCH C01HBa0163B20.1+ SGN-E332787+ 0.976 413 1.000 C PGS_C01HBa0163B20.1+_SGN-E332787+ (63705 64117) Alignment (genomic DNA sequence = upper lines): AAAGCTGCCA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 63764 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG 63824 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 63884 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 63944 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGTA CCACCCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT 64004 |||||||| | |||| ||||| |||||||||| |||||||||| |||||||||| || ||| || CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCCGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 64064 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCTA GTAACCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGC 64117 |||||||| | |||| ||||| |||||||||| |||||||||| || ||||||| ||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCCAGCCTAA TGC 413 hqPGS_C01HBa0163B20.1+_SGN-E332787+ (63705 64117) ******************************************************************************** EST sequence 11 +strand 532 n (File: SGN-E331514+) 1 TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 61 CTTTGATTTC TCAAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 121 CGTTGCTTAT GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG 181 TGACGAAATG ATGAAGCTAA TGAGTACCAC CCGGGAGCTG AGTAGCAATG CTCTTTCCAT 241 GGTCAACAAC TTTGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC 301 AAACAGTGAC TCATTTGTCG AAGCTAGTAA CCGTAAGCTC CTTCAAATTT CTGCCTCCAA 361 GCCTAATGCT GTGGTTTCTA CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCACT 421 TCAAGCTGTC CCCAGGAGCA GTCCAACTCC TTTCGTTATC CTGATCAAGG CGGGTACATA 481 CAAGGAACAC ATTGAAATCG AAAAGAACAT GCTAAATGTT GTGCTTATTG GT Predicted gene structure (within gDNA segment 63149 to 64890): Exon 1 63749 64280 ( 532 n); cDNA 1 532 ( 532 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E331514+ 1.000 532 1.000 C PGS_C01HBa0163B20.1+_SGN-E331514+ (63749 64280) Alignment (genomic DNA sequence = upper lines): TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 63808 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 60 CTTTGATTTC TCAAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 63868 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGATTTC TCAAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 120 CGTTGCTTAT GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG 63928 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGCTTAT GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG 180 TGACGAAATG ATGAAGCTAA TGAGTACCAC CCGGGAGCTG AGTAGCAATG CTCTTTCCAT 63988 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACGAAATG ATGAAGCTAA TGAGTACCAC CCGGGAGCTG AGTAGCAATG CTCTTTCCAT 240 GGTCAACAAC TTTGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC 64048 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCAACAAC TTTGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC 300 AAACAGTGAC TCATTTGTCG AAGCTAGTAA CCGTAAGCTC CTTCAAATTT CTGCCTCCAA 64108 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACAGTGAC TCATTTGTCG AAGCTAGTAA CCGTAAGCTC CTTCAAATTT CTGCCTCCAA 360 GCCTAATGCT GTGGTTTCTA CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCACT 64168 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTAATGCT GTGGTTTCTA CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCACT 420 TCAAGCTGTC CCCAGGAGCA GTCCAACTCC TTTCGTTATC CTGATCAAGG CGGGTACATA 64228 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGCTGTC CCCAGGAGCA GTCCAACTCC TTTCGTTATC CTGATCAAGG CGGGTACATA 480 CAAGGAACAC ATTGAAATCG AAAAGAACAT GCTAAATGTT GTGCTTATTG GT 64280 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || CAAGGAACAC ATTGAAATCG AAAAGAACAT GCTAAATGTT GTGCTTATTG GT 532 hqPGS_C01HBa0163B20.1+_SGN-E331514+ (63749 64280) ******************************************************************************** EST sequence 203 +strand 560 n (File: SGN-E331151+) 1 GCCGCTCTAT CTTTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 61 ACCTCAAGTC ATGGCTTATC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 121 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACTCTGG 181 AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 241 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAATCGTA 301 AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT GGAAGCGGAC 361 AATACAAGAC CATTCAAGAA GCACTTCAAG CTGTCCCCAA GAGCAGTCCA ACTCCTTTCG 421 TTATCCTGAT CAAGGCGGGT ACATACAAGG AACACATTCA AATCGAAAAG AACATGCTAA 481 ATGTTGTGCT TATTGGTGAA AGCCCAACCA AGACCATAAT CACCGGTGAC CAGGCAGTAG 541 TTCCTAACCG TATATCAACA Predicted gene structure (within gDNA segment 63067 to 64953): Exon 1 63787 64343 ( 557 n); cDNA 4 560 ( 557 n); score: 0.969 MATCH C01HBa0163B20.1+ SGN-E331151+ 0.969 557 0.995 C PGS_C01HBa0163B20.1+_SGN-E331151+ (63787 64343) Alignment (genomic DNA sequence = upper lines): GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCAAAGAT GAAGGATATA GTGGATGACC 63846 |||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| GCTCTATCTT TAGGATTGAG AACTTTGATT TCTCTAAGAT GAAGGATATA GTGGATGACC 63 TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGAAGAGAC TTGTTTAGAT GGTTTCACCA 63906 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGTCATG GCTTATCGCT GTCGTTGCTT ATGAAGAGAC TTGTTTAGAT GGTTTCACCA 123 AATCAGAATA CAGTGCAACC CGTGACGAAA TGATGAAGCT AATGAGTACC ACCCGGGAGC 63966 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| || | ||||| AATCAGAATA CAGTGCAACC CGTGACGAAA TGATGAAGCT AATGAGCACC ACTCTGGAGC 183 TGAGTAGCAA TGCTCTTTCC ATGGTCAACA ACTTTGGTGA AATGATCACA CAAAACACAG 64026 |||||||||| |||||||||| |||||||||| ||| ||||| |||||||||| |||||||||| TGAGTAGCAA TGCTCTTTCC ATGGTCAACA GCTTCGGTGA AATGATCACA CAAAACACAG 243 GCCTTACCCG CAAATTGTTA TCAAACAGTG ACTCATTTGT CGAAGCTAGT AACCGTAAGC 64086 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| || ||||||| GCCTTACCCG CAAATTGTTA TCAAACAGTG ACTCATTTGT CGAAGCCAGT AATCGTAAGC 303 TCCTTCAAAT TTCTGCCTCC AAGCCTAATG CTGTGGTTTC TACCAGTGGA GGCGGACAAT 64146 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ||||||||| TCCTTCAAAT TTCTGCCTCC AAGCCTAATG CTGTGGTTTC TGCCAGTGGA AGCGGACAAT 363 ACAAGACCAT TCAGGAAGCA CTTCAAGCTG TCCCCAGGAG CAGTCCAACT CCTTTCGTTA 64206 |||||||||| ||| |||||| |||||||||| |||||| ||| |||||||||| |||||||||| ACAAGACCAT TCAAGAAGCA CTTCAAGCTG TCCCCAAGAG CAGTCCAACT CCTTTCGTTA 423 TCCTGATCAA GGCGGGTACA TACAAGGAAC ACATTGAAAT CGAAAAGAAC ATGCTAAATG 64266 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TCCTGATCAA GGCGGGTACA TACAAGGAAC ACATTCAAAT CGAAAAGAAC ATGCTAAATG 483 TTGTGCTTAT TGGTGAAGGC CCAACCAAGA CCATAATCAC CGGTGACCAG GCAGTAGTTC 64326 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTGTGCTTAT TGGTGAAAGC CCAACCAAGA CCATAATCAC CGGTGACCAG GCAGTAGTTC 543 CTAACCGTAT ATCAACA 64343 |||||||||| ||||||| CTAACCGTAT ATCAACA 560 hqPGS_C01HBa0163B20.1+_SGN-E331151+ (63787 64343) ******************************************************************************** EST sequence 122 +strand 694 n (File: SGN-E333376+) 1 AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 61 AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 121 GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 181 TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 241 ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 301 GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 361 CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 421 TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 481 AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA CAGCCACCCT 541 TGGTGTTTGT GGTGATGGTT TCGTTATGAA GGACATGGGT ATTGAAAACA CAGCAGGACC 601 CACAAAAGAA CAAGCCGTTG CATTGAGAAT TAATGCTGAN TAGGCTGNTC TCTACAACTG 661 NCATATCGAT GGTTACCAAG ACACGTTATA CGCT Predicted gene structure (within gDNA segment 63221 to 65619): Exon 1 63821 64514 ( 694 n); cDNA 1 694 ( 694 n); score: 0.991 MATCH C01HBa0163B20.1+ SGN-E333376+ 0.991 694 1.000 C PGS_C01HBa0163B20.1+_SGN-E333376+ (63821 64514) Alignment (genomic DNA sequence = upper lines): AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 63880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 60 AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 63940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 120 GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 64000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 180 TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 64060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 240 ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 64120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 300 GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 64180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 360 CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 64240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 420 TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 64300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 480 AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA CAGCCACCCT 64360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA CAGCCACCCT 540 TGGTGTTTGT GGTGATGGTT TCGTTATGAA GGACATGGGT ATTGAAAACA CAGCAGGACC 64420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGTTTGT GGTGATGGTT TCGTTATGAA GGACATGGGT ATTGAAAACA CAGCAGGACC 600 CACAAAAGAA CAAGCCGTTG CATTGAGAAT TAATGCTGAT AAGGCTGTTC TCTACAACTG 64480 |||||||||| |||||||||| |||||||||| ||||||||| |||||| || |||||||||| CACAAAAGAA CAAGCCGTTG CATTGAGAAT TAATGCTGAN TAGGCTGNTC TCTACAACTG 660 CAATATCGAT GGTTACCAAG ACACGTTATA TGCT 64514 |||||||| |||||||||| |||||||||| ||| NCATATCGAT GGTTACCAAG ACACGTTATA CGCT 694 hqPGS_C01HBa0163B20.1+_SGN-E333376+ (63821 64514) ******************************************************************************** EST sequence 111 +strand 530 n (File: SGN-E333032+) 1 AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 61 AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 121 GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 181 TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 241 ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 301 GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 361 CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 421 TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 481 AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA Predicted gene structure (within gDNA segment 63221 to 64960): Exon 1 63821 64350 ( 530 n); cDNA 1 530 ( 530 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E333032+ 1.000 530 1.000 C PGS_C01HBa0163B20.1+_SGN-E333032+ (63821 64350) Alignment (genomic DNA sequence = upper lines): AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 63880 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 60 AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 63940 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 120 GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 64000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 180 TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 64060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 240 ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 64120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 300 GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 64180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 360 CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 64240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 420 TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 64300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 480 AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA 64350 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA 530 hqPGS_C01HBa0163B20.1+_SGN-E333032+ (63821 64350) ******************************************************************************** EST sequence 63 +strand 758 n (File: SGN-E332184+) 1 TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 61 CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 121 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 181 TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 241 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 301 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 361 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 421 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 481 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 541 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 601 CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 661 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC CAAACTGCAA ATTGATTGTG 721 AGGAAACAGG TCCTAATCAA GCTGCATGAT CACTGCTC Predicted gene structure (within gDNA segment 63296 to 65266): Exon 1 63896 64656 ( 761 n); cDNA 1 758 ( 758 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E332184+ 0.995 761 1.004 C PGS_C01HBa0163B20.1+_SGN-E332184+ (63896 64656) Alignment (genomic DNA sequence = upper lines): TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 63955 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 60 CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 64015 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 120 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 64075 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 180 TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 64135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 240 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 64195 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 300 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 64255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 360 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 64315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 420 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 64375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 480 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 64435 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 540 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 64495 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 600 CCAAGACACG TTATATGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 64555 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 660 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC CAAAACTGCA AATTGATTGT 64615 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC C-AAACTGCA AATTGATTGT 719 GAGGAAACCA GGTCCTAATC AAGCTTGCAT GATCACTGCT C 64656 ||||||| || |||||||||| |||| ||||| |||||||||| | GAGGAAA-CA GGTCCTAATC AAGC-TGCAT GATCACTGCT C 758 hqPGS_C01HBa0163B20.1+_SGN-E332184+ (63896 64656) ******************************************************************************** EST sequence 60 +strand 756 n (File: SGN-E331978+) 1 TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 61 CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 121 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 181 TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 241 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 301 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 361 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 421 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 481 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 541 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 601 CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 661 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC AAAACTGCAA ATTGATTGTG 721 AGGAAACCAG GTCCTAATCA AGCTTGCATG ATCACT Predicted gene structure (within gDNA segment 63296 to 65262): Exon 1 63896 64652 ( 757 n); cDNA 1 756 ( 756 n); score: 0.997 MATCH C01HBa0163B20.1+ SGN-E331978+ 0.997 757 1.001 C PGS_C01HBa0163B20.1+_SGN-E331978+ (63896 64652) Alignment (genomic DNA sequence = upper lines): TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 63955 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 60 CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 64015 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 120 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 64075 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 180 TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 64135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 240 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 64195 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 300 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 64255 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 360 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 64315 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 420 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 64375 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 480 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 64435 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 540 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 64495 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 600 CCAAGACACG TTATATGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 64555 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 660 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC CAAAACTGCA AATTGATTGT 64615 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTT- CAAAACTGCA AATTGATTGT 719 GAGGAAACCA GGTCCTAATC AAGCTTGCAT GATCACT 64652 |||||||||| |||||||||| |||||||||| ||||||| GAGGAAACCA GGTCCTAATC AAGCTTGCAT GATCACT 756 hqPGS_C01HBa0163B20.1+_SGN-E331978+ (63896 64652) ******************************************************************************** EST sequence 77 +strand 643 n (File: SGN-E332171+) 1 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 61 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 121 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 181 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 241 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 301 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 361 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 421 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 481 GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 541 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGANGAAACC 601 AGGTCCTAAT CAAGCTTGCA TGATCACTGC TCAAGGAAGG ATG Predicted gene structure (within gDNA segment 63425 to 65277): Exon 1 64025 64667 ( 643 n); cDNA 1 643 ( 643 n); score: 0.997 MATCH C01HBa0163B20.1+ SGN-E332171+ 0.997 643 1.000 C PGS_C01HBa0163B20.1+_SGN-E332171+ (64025 64667) Alignment (genomic DNA sequence = upper lines): AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 64084 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 60 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 64144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 120 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 64204 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 180 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 64264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 240 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 64324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 300 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 64384 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 360 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 64444 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 420 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 64504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 480 GTTATATGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 64564 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 540 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 64624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGANGAAACC 600 AGGTCCTAAT CAAGCTTGCA TGATCACTGC TCAAGGAAGG ATG 64667 |||||||||| |||||||||| |||||||||| |||||||||| ||| AGGTCCTAAT CAAGCTTGCA TGATCACTGC TCAAGGAAGG ATG 643 hqPGS_C01HBa0163B20.1+_SGN-E332171+ (64025 64667) ******************************************************************************** EST sequence 71 +strand 629 n (File: SGN-E332127+) 1 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 61 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 121 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 181 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 241 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 301 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 361 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 421 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 481 GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 541 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 601 AGGTCCTAAT CAAGCTTGCA TGATCACTG Predicted gene structure (within gDNA segment 63425 to 65263): Exon 1 64025 64653 ( 629 n); cDNA 1 629 ( 629 n); score: 0.998 MATCH C01HBa0163B20.1+ SGN-E332127+ 0.998 629 1.000 C PGS_C01HBa0163B20.1+_SGN-E332127+ (64025 64653) Alignment (genomic DNA sequence = upper lines): AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 64084 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 60 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 64144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 120 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 64204 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 180 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 64264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 240 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 64324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 300 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 64384 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 360 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 64444 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 420 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 64504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 480 GTTATATGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 64564 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 540 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 64624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 600 AGGTCCTAAT CAAGCTTGCA TGATCACTG 64653 |||||||||| |||||||||| ||||||||| AGGTCCTAAT CAAGCTTGCA TGATCACTG 629 hqPGS_C01HBa0163B20.1+_SGN-E332127+ (64025 64653) ******************************************************************************** EST sequence 37 +strand 967 n (File: SGN-E378571+) 1 TTTGTCGAAG CCAGTAACCG TCAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 61 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 121 AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 181 GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 241 ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 301 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 361 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 421 AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 481 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 541 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 601 AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 661 CCAGCACTCA CTAGCGCCAA TCCACCANGT CAAGTCTATC TTGGACGTCC ATGGAAGGAG 721 TTTTCCAAGA CCATCATAAT GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG 781 TCACCATGGA ACACAACTGA TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC 841 AGAGGACCAG GTGCTGCACT TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCCAAAGGAT 901 ATTTCAGGAG ACGTTATTAA CAGCTTCACT GCCGGTAAAT TCATTAATAC ACACAGCCAT 961 GGTTACC Predicted gene structure (within gDNA segment 63264 to 65764): Exon 1 64062 65029 ( 968 n); cDNA 1 967 ( 967 n); score: 0.979 MATCH C01HBa0163B20.1+ SGN-E378571+ 0.979 968 1.001 C PGS_C01HBa0163B20.1+_SGN-E378571+ (64062 65029) Alignment (genomic DNA sequence = upper lines): TTTGTCGAAG CTAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 64121 |||||||||| | |||||||| | |||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAAG CCAGTAACCG TCAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 60 GTTTCTACCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 64181 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 120 AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 64241 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 180 GAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 64301 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 240 ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 64361 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 300 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 64421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 360 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC 64481 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| |||||||||| ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 420 AATATCGATG GTTACCAAGA CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT 64541 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 480 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 64601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 540 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 64661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 600 AGGATGAGAA AAGATTCCTT AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT 64721 |||||||||| |||||||||| ||| |||| |||||||| | |||||||||| |||||||||| AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 660 CAAGCACTCA CTAGCGCCAA TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG 64781 | |||||||| |||||||||| ||||||| ||||||||| |||||||||| |||||||||| CCAGCACTCA CTAGCGCCAA TCCACCANGT CAAGTCTATC TTGGACGTCC ATGGAAGGAG 720 TTTTCCAAGA CCATCATAAT GCAATCAAAC ATCGATGGAT TCGTTGATCC ATCAGGATGG 64841 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| TTTTCCAAGA CCATCATAAT GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG 780 TCACCATGGA ACACAACTGA TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC 64901 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCATGGA ACACAACTGA TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC 840 AGAGGACCAG GTGCTGCACT TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT 64961 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| AGAGGACCAG GTGCTGCACT TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCCAAAGGAT 900 ATTTCAGGAG ACGTTATTAA CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA 65021 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ATTTCAGGAG ACGTTATTAA CAGCTTCACT GCCGGTAAAT TCATTAATAC AC-ACAGCCA 959 TGGTTACC 65029 |||||||| TGGTTACC 967 hqPGS_C01HBa0163B20.1+_SGN-E378571+ (64062 65029) ******************************************************************************** EST sequence 40 +strand 682 n (File: SGN-E374055+) 1 TTTGTCGAAG CCAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 61 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 121 AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 181 GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 241 ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 301 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 361 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 421 AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 481 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 541 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 601 AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 661 CCAGCACTCA CTAGCGCCAA TC Predicted gene structure (within gDNA segment 63354 to 65353): Exon 1 64062 64743 ( 682 n); cDNA 1 682 ( 682 n); score: 0.982 MATCH C01HBa0163B20.1+ SGN-E374055+ 0.982 682 1.000 C PGS_C01HBa0163B20.1+_SGN-E374055+ (64062 64743) Alignment (genomic DNA sequence = upper lines): TTTGTCGAAG CTAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 64121 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAAG CCAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 60 GTTTCTACCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 64181 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 120 AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 64241 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 180 GAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 64301 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 240 ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 64361 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 300 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 64421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 360 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC 64481 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| |||||||||| ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 420 AATATCGATG GTTACCAAGA CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT 64541 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 480 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 64601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 540 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 64661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 600 AGGATGAGAA AAGATTCCTT AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT 64721 |||||||||| |||||||||| ||| |||| |||||||| | |||||||||| |||||||||| AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 660 CAAGCACTCA CTAGCGCCAA TC 64743 | |||||||| |||||||||| || CCAGCACTCA CTAGCGCCAA TC 682 hqPGS_C01HBa0163B20.1+_SGN-E374055+ (64062 64743) ******************************************************************************** EST sequence 212 -strand 772 n (File: SGN-E547511-) 1 CGTTATGAAG GACATGGGTA TGAAAACACA GCAGGACCCA CAAAAGAACA AGCCGTTGCA 61 TTGAGAATTA ATGCCGATAG GGCTGTTCTC TACAACTGCA ATATCGATGG TTACCAAGAC 121 ACGTTATACG CTCACTCAGG AAGACAATTT TATCGTGATT GTACCATTAC AGGCACCATT 181 GATTTCTTGT TTGGTGATGC AAGTGCTGTT TTCCAAAACT GCAAATTGAT TGTGAGGAAA 241 CCAGGTCCTA ATCAAGCTTG CATGATCACT GCTCAAGGAA GGATGAGAAA AGATTCCTTT 301 GGTACATTCG TTATCCAGAA TTGTGACATC AAGGCTGATC CAGCACTCAC TAGCGCCAAT 361 CCACCAGTCA AAGTCTATCT TGGACGTCCA TGGAAGGAGT TTTCCAAGAC CATCATAATG 421 CAATCAAACA TCGATGGATT CGTCGATCCA TCAGGATGGT CACCATGGAA CACAACTGAT 481 TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG TGCTGCACTT 541 GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA CGTTATTAAC 601 AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAGT GTTTGATATT 661 CCCTATGAAG CTGGCATGAT GAAGAGTGTA ATTGCATATA CCATTCNACC CTGTAATTTT 721 TTCTAATTAT TCANAAATTA TATTTCCTAA AAAAAAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 63772 to 66546): Exon 1 64382 65127 ( 746 n); cDNA 1 748 ( 748 n); score: 0.973 PPA cDNA 749 772 MATCH C01HBa0163B20.1+ SGN-E547511- 0.973 746 0.966 C PGS_C01HBa0163B20.1+_SGN-E547511- (64382 65127) Alignment (genomic DNA sequence = upper lines): CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC ACAAAAGAAC AAGCCGTTGC 64441 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CGTTATGAAG GACATGGGTA -TGAAAACAC AGCAGGACCC ACAAAAGAAC AAGCCGTTGC 59 ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC AATATCGATG GTTACCAAGA 64501 |||||||||| ||||| |||| ||||||||| |||||||||| |||||||||| |||||||||| ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC AATATCGATG GTTACCAAGA 119 CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 64561 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 179 TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 64621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 239 ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 64681 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 299 AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT CAAGCACTCA CTAGCGCCAA 64741 ||| |||| |||||||| | |||||||||| |||||||||| | |||||||| |||||||||| TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT CCAGCACTCA CTAGCGCCAA 359 TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG TTTTCCAAGA CCATCATAAT 64801 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG TTTTCCAAGA CCATCATAAT 419 GCAATCAAAC ATCGATGGAT TCGTTGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 64861 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 479 TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 64921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 539 TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 64981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 599 CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAA TGTTTGATAT 65041 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAG TGTTTGATAT 659 TCCCTATGAA GCTGGCATGA TGAAG-GTGT AATTACATAT ACCATTC-AT CCTGTAATTT 65099 |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||| | |||||||||| TCCCTATGAA GCTGGCATGA TGAAGAGTGT AATTGCATAT ACCATTCNAC CCTGTAATTT 719 TTTCTAATTA TTCA-AAATT ATATTTCCT 65127 |||||||||| |||| ||||| ||||||||| TTTCTAATTA TTCANAAATT ATATTTCCT 748 hqPGS_C01HBa0163B20.1+_SGN-E547511- (64382 65127) ******************************************************************************** EST sequence 231 -strand 731 n (File: SGN-E374054-) 1 AAACACAGCA GGACCCACAA AAGAACAAGC CGTTGCATTG AGAATTAATG CCGATAGGGC 61 TGTTCTCTAC AACTGCAATA TCGATGGTTA CCAAGACACG TTATACGCTC ACTCAGGAAG 121 ACAATTTTAT CGTGATTGTA CCATTACAGG CACCATTGAT TTCTTGTTTG GTGATGCAAG 181 TGCTGTTTTC CAAAACTGCA AATTGATTGT GAGGAAACCA GGTCCTAATC AAGCTTGCAT 241 GATCACTGCT CAAGGAAGGA TGAGAAAAGA TTCCTTTGGT ACATTCGTTA TCCAGAATTG 301 TGACATCAAG GCTGATCCAG CACTCACTAG CGCCAATCCA CCAGTCAAAG TCTATCTTGG 361 ACGTCCATGG AAGGAGTTTT CCAAGACCAT CATAATGCAA TCAAACATCG ATGGATTCGT 421 CGATCCATCA GGATGGTCAC CATGGAACAC AACTGATTTT GGAATACACA CATGTTTTTA 481 TGCAGAGTAT CAGAACAGAG GACCAGGTGC TGCACTTGAC AAAAGAGTCT CCACATGGAG 541 AGGTTACCAA AAGGATATTT CAGGAGACGT TATTAACAGC TTCACTGCCG GTAAATTCAT 601 TAATACACAA CAGCCATGGT TACCAGTGTT TGATATTCCC TATGAAGCTG GCATGATGAA 661 GGTGTAATTG CATATACCAT TCACCCTGTA ATTTTTTCTA ATTATTCAAA ATTATATTTC 721 CTAAAAAAAA A Predicted gene structure (within gDNA segment 63796 to 65808): Exon 1 64406 65127 ( 722 n); cDNA 1 722 ( 722 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E374054- 0.983 722 0.988 C PGS_C01HBa0163B20.1+_SGN-E374054- (64406 65127) Alignment (genomic DNA sequence = upper lines): AAACACAGCA GGACCCACAA AAGAACAAGC CGTTGCATTG AGAATTAATG CTGATAAGGC 64465 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| AAACACAGCA GGACCCACAA AAGAACAAGC CGTTGCATTG AGAATTAATG CCGATAGGGC 60 TGTTCTCTAC AACTGCAATA TCGATGGTTA CCAAGACACG TTATATGCTC ACTCAGGAAG 64525 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TGTTCTCTAC AACTGCAATA TCGATGGTTA CCAAGACACG TTATACGCTC ACTCAGGAAG 120 ACAATTTTAT CGTGATTGTA CCATTACAGG CACCATTGAT TTCTTGTTTG GTGATGCAAG 64585 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATTTTAT CGTGATTGTA CCATTACAGG CACCATTGAT TTCTTGTTTG GTGATGCAAG 180 TGCTGTTTTC CAAAACTGCA AATTGATTGT GAGGAAACCA GGTCCTAATC AAGCTTGCAT 64645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGTTTTC CAAAACTGCA AATTGATTGT GAGGAAACCA GGTCCTAATC AAGCTTGCAT 240 GATCACTGCT CAAGGAAGGA TGAGAAAAGA TTCCTTAGGT GGATTCGTTA TCCAAAATTG 64705 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| |||| ||||| GATCACTGCT CAAGGAAGGA TGAGAAAAGA TTCCTTTGGT ACATTCGTTA TCCAGAATTG 300 TGACATCAAG GCTGATCAAG CACTCACTAG CGCCAATCCA CCAGTCAAAG TCTATCTTGG 64765 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TGACATCAAG GCTGATCCAG CACTCACTAG CGCCAATCCA CCAGTCAAAG TCTATCTTGG 360 ACGTCCATGG AAGGAGTTTT CCAAGACCAT CATAATGCAA TCAAACATCG ATGGATTCGT 64825 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTCCATGG AAGGAGTTTT CCAAGACCAT CATAATGCAA TCAAACATCG ATGGATTCGT 420 TGATCCATCA GGATGGTCAC CATGGAACAC AACTGATTTT GGAATACACA CATGTTTTTA 64885 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATCCATCA GGATGGTCAC CATGGAACAC AACTGATTTT GGAATACACA CATGTTTTTA 480 TGCAGAGTAT CAGAACAGAG GACCAGGTGC TGCACTTGAC AAAAGAGTCT CCACATGGAG 64945 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGAGTAT CAGAACAGAG GACCAGGTGC TGCACTTGAC AAAAGAGTCT CCACATGGAG 540 AGGTTACCAA AAGGATATTT CAGGAGACGT TATTAACAGC TTCACTGCCG GTAAATTCAT 65005 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTACCAA AAGGATATTT CAGGAGACGT TATTAACAGC TTCACTGCCG GTAAATTCAT 600 TAATACACAA CAGCCATGGT TACCAATGTT TGATATTCCC TATGAAGCTG GCATGATGAA 65065 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| TAATACACAA CAGCCATGGT TACCAGTGTT TGATATTCCC TATGAAGCTG GCATGATGAA 660 GGTGTAATTA CATATACCAT TCATCCTGTA ATTTTTTCTA ATTATTCAAA ATTATATTTC 65125 ||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| GGTGTAATTG CATATACCAT TCACCCTGTA ATTTTTTCTA ATTATTCAAA ATTATATTTC 720 CT 65127 || CT 722 hqPGS_C01HBa0163B20.1+_SGN-E374054- (64406 65127) ******************************************************************************** EST sequence 282 -strand 702 n (File: SGN-E549438-) 1 TTGCATTGAG AATTAATGCC GATAGGGCTG TTCTCTACAA CTGCAATATC GATGGTTACC 61 AAGACACGTT ATACGCTCAC TCAGGAAGAC AATTTTATCG TGATTGTACC ATTACAGGCA 121 CCATTGATTT CTTGTTTGGT GATGCAAGTG CTGTTTTCCA AAACTGCAAA TTGATTGTGA 181 GGAAACCAGG TCCTAATCAA GCTTGCATGA TCACTGCTCA AGGAAGGATG AGAAAAGATT 241 CCTTTGGTAC ATTCGTTATC CAGAATTGTG ACATCAAGGC TGATCCAGCA CTCACTAGCG 301 CCAATCCACC AGTCAAAGTC TATCTTGGAC GTCCATGGAA GGAGTTTTCC AAGACCATCA 361 TAATGCAATC AAACATCGAT GGATTCGTCG ATCCATCAGG ATGGTCACCA TGGAACACAA 421 CTGATTTTGG AATACACACA TGTTTTTATG CAGAGTATCA GAACAGAGGA CCAGGTGCTG 481 CACTTGACAA AAGAGTCTCC ACATGGAGAG GTTACCAAAA GGATATTTCA GGAGACGTTA 541 TTAACAGCTT CACTGCCGGT AAATTCATTA ATACACAACA GCCATGGTTA CCAGTGTTTG 601 ATATTCCCTA TGAAGCTGGC ATGATGAAGG TGTAATTGCA TATACCATTC ACCCCTGTAA 661 TTTTTTCTAA TTATTCAAAA TTATATTTCC TAAAAAAAAA AA Predicted gene structure (within gDNA segment 63828 to 65828): Exon 1 64438 65127 ( 690 n); cDNA 1 691 ( 691 n); score: 0.979 PPA cDNA 692 702 MATCH C01HBa0163B20.1+ SGN-E549438- 0.979 690 0.983 C PGS_C01HBa0163B20.1+_SGN-E549438- (64438 65127) Alignment (genomic DNA sequence = upper lines): TTGCATTGAG AATTAATGCT GATAAGGCTG TTCTCTACAA CTGCAATATC GATGGTTACC 64497 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TTGCATTGAG AATTAATGCC GATAGGGCTG TTCTCTACAA CTGCAATATC GATGGTTACC 60 AAGACACGTT ATATGCTCAC TCAGGAAGAC AATTTTATCG TGATTGTACC ATTACAGGCA 64557 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACACGTT ATACGCTCAC TCAGGAAGAC AATTTTATCG TGATTGTACC ATTACAGGCA 120 CCATTGATTT CTTGTTTGGT GATGCAAGTG CTGTTTTCCA AAACTGCAAA TTGATTGTGA 64617 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTGATTT CTTGTTTGGT GATGCAAGTG CTGTTTTCCA AAACTGCAAA TTGATTGTGA 180 GGAAACCAGG TCCTAATCAA GCTTGCATGA TCACTGCTCA AGGAAGGATG AGAAAAGATT 64677 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAACCAGG TCCTAATCAA GCTTGCATGA TCACTGCTCA AGGAAGGATG AGAAAAGATT 240 CCTTAGGTGG ATTCGTTATC CAAAATTGTG ACATCAAGGC TGATCAAGCA CTCACTAGCG 64737 |||| ||| |||||||||| || ||||||| |||||||||| ||||| |||| |||||||||| CCTTTGGTAC ATTCGTTATC CAGAATTGTG ACATCAAGGC TGATCCAGCA CTCACTAGCG 300 CCAATCCACC AGTCAAAGTC TATCTTGGAC GTCCATGGAA GGAGTTTTCC AAGACCATCA 64797 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATCCACC AGTCAAAGTC TATCTTGGAC GTCCATGGAA GGAGTTTTCC AAGACCATCA 360 TAATGCAATC AAACATCGAT GGATTCGTTG ATCCATCAGG ATGGTCACCA TGGAACACAA 64857 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TAATGCAATC AAACATCGAT GGATTCGTCG ATCCATCAGG ATGGTCACCA TGGAACACAA 420 CTGATTTTGG AATACACACA TGTTTTTATG CAGAGTATCA GAACAGAGGA CCAGGTGCTG 64917 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGATTTTGG AATACACACA TGTTTTTATG CAGAGTATCA GAACAGAGGA CCAGGTGCTG 480 CACTTGACAA AAGAGTCTCC ACATGGAGAG GTTACCAAAA GGATATTTCA GGAGACGTTA 64977 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTGACAA AAGAGTCTCC ACATGGAGAG GTTACCAAAA GGATATTTCA GGAGACGTTA 540 TTAACAGCTT CACTGCCGGT AAATTCATTA ATACACAACA GCCATGGTTA CCAATGTTTG 65037 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTAACAGCTT CACTGCCGGT AAATTCATTA ATACACAACA GCCATGGTTA CCAGTGTTTG 600 ATATTCCCTA TGAAGCTGGC ATGATGAAGG TGTAATTACA TATACCATTC A-TCCTGTAA 65096 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| | ||||||| ATATTCCCTA TGAAGCTGGC ATGATGAAGG TGTAATTGCA TATACCATTC ACCCCTGTAA 660 TTTTTTCTAA TTATTCAAAA TTATATTTCC T 65127 |||||||||| |||||||||| |||||||||| | TTTTTTCTAA TTATTCAAAA TTATATTTCC T 691 hqPGS_C01HBa0163B20.1+_SGN-E549438- (64438 65127) ******************************************************************************** EST sequence 234 -strand 649 n (File: SGN-E374063-) 1 CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 61 TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 121 ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 181 TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT CCAGCACTCA CTAGCGCCAA 241 TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGAAAGGAG TTTTCCAAGA CCATCATAAT 301 GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 361 TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 421 TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 481 CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAG TGTTTGATAT 541 TCCCTATGAA GCTGGCATGA TGAAGGTGTA ATTGCATATA CCATTCACCC TGTAATTTTT 601 TCTAATTATT CAAAATTATA TTTCCTATTT CCTTTGTATA AAAAAAAAA Predicted gene structure (within gDNA segment 63802 to 65858): Exon 1 64502 65127 ( 626 n); cDNA 1 626 ( 626 n); score: 0.982 PPA cDNA 638 649 MATCH C01HBa0163B20.1+ SGN-E374063- 0.982 626 0.965 C PGS_C01HBa0163B20.1+_SGN-E374063- (64502 65127) Alignment (genomic DNA sequence = upper lines): CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 64561 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 60 TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 64621 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 120 ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 64681 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 180 AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT CAAGCACTCA CTAGCGCCAA 64741 ||| |||| |||||||| | |||||||||| |||||||||| | |||||||| |||||||||| TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT CCAGCACTCA CTAGCGCCAA 240 TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG TTTTCCAAGA CCATCATAAT 64801 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGAAAGGAG TTTTCCAAGA CCATCATAAT 300 GCAATCAAAC ATCGATGGAT TCGTTGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 64861 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 360 TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 64921 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 420 TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 64981 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 480 CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAA TGTTTGATAT 65041 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAG TGTTTGATAT 540 TCCCTATGAA GCTGGCATGA TGAAGGTGTA ATTACATATA CCATTCATCC TGTAATTTTT 65101 |||||||||| |||||||||| |||||||||| ||| |||||| ||||||| || |||||||||| TCCCTATGAA GCTGGCATGA TGAAGGTGTA ATTGCATATA CCATTCACCC TGTAATTTTT 600 TCTAATTATT CAAAATTATA TTTCCT 65127 |||||||||| |||||||||| |||||| TCTAATTATT CAAAATTATA TTTCCT 626 hqPGS_C01HBa0163B20.1+_SGN-E374063- (64502 65127) ******************************************************************************** EST sequence 240 -strand 471 n (File: SGN-E226303-) 1 TCGTTATCCA GAATTGTGAC ATCAAGGCTG ATAAAGCACT CACTAGCGCC AATCCACCAG 61 TCAAAGTCTA TCTTGGACGT CCATGGAAGG AGTTTTCCAA GACCATCATA ATGCAATCAA 121 ACATCGATGG ATTCGTCGAT CCATCAGGAT GGTCCCCATG GAACCCAACT GATTTTGGAA 181 TACACACATG TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA 241 GAGTCTCCAC ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCC 301 CTGCCGGTAA ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG 361 AAGCTGGCAT GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA 421 TTCAAAATTA TATTTCCTAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 63981 to 66048): Exon 1 64690 65127 ( 438 n); cDNA 1 438 ( 438 n); score: 0.986 PPA cDNA 439 471 MATCH C01HBa0163B20.1+ SGN-E226303- 0.986 438 0.930 C PGS_C01HBa0163B20.1+_SGN-E226303- (64690 65127) Alignment (genomic DNA sequence = upper lines): TCGTTATCCA AAATTGTGAC ATCAAGGCTG ATCAAGCACT CACTAGCGCC AATCCACCAG 64749 |||||||||| ||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TCGTTATCCA GAATTGTGAC ATCAAGGCTG ATAAAGCACT CACTAGCGCC AATCCACCAG 60 TCAAAGTCTA TCTTGGACGT CCATGGAAGG AGTTTTCCAA GACCATCATA ATGCAATCAA 64809 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTCTA TCTTGGACGT CCATGGAAGG AGTTTTCCAA GACCATCATA ATGCAATCAA 120 ACATCGATGG ATTCGTTGAT CCATCAGGAT GGTCACCATG GAACACAACT GATTTTGGAA 64869 |||||||||| |||||| ||| |||||||||| |||| ||||| |||| ||||| |||||||||| ACATCGATGG ATTCGTCGAT CCATCAGGAT GGTCCCCATG GAACCCAACT GATTTTGGAA 180 TACACACATG TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA 64929 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACACATG TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA 240 GAGTCTCCAC ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCA 64989 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GAGTCTCCAC ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCC 300 CTGCCGGTAA ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG 65049 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCCGGTAA ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG 360 AAGCTGGCAT GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA 65109 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTGGCAT GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA 420 TTCAAAATTA TATTTCCT 65127 |||||||||| |||||||| TTCAAAATTA TATTTCCT 438 hqPGS_C01HBa0163B20.1+_SGN-E226303- (64690 65127) ******************************************************************************** EST sequence 243 -strand 442 n (File: SGN-E226674-) 1 TAAAGCACTC ACTAGCGCCA ATCCACCAGT CAAAGTCTAT CTTGGACGTC CATGGAAGGA 61 GTTTTCCAAG ACCATCATAA TGCAATCAAA CATCGATGGA TTCGTCGATC CATCAGGATG 121 GTCACCATGG AACACAACTG ATTTTGGAAT ACACACATGT TTTTATGCAG AGTATCAGAA 181 CAGAGGACCA GGTGCTGCAC TTGACAAAAG AGTCTCCACA TGGAGAGGTT ACCAAAAGGA 241 TATTTCAGGA GACGTTATTA ACAGCTTCAC TGCCGGTAAA TTCATTAATA CACAACAGCC 301 ATGGTTACCA ATGTTTGATA TTCCCTATGA AGCTGGCATG ATGAAGGTGT AATTACATAT 361 ACCATTCATC CTGTAATTTT TTCTAATTAT TCAAAATTAT ATTTCCTAAA AAAAAAAAAA 421 AAAAAAAAAA AAAAAAAAAA AC Predicted gene structure (within gDNA segment 64093 to 66068): Exon 1 64723 65127 ( 405 n); cDNA 3 407 ( 405 n); score: 0.998 PPA cDNA 408 442 MATCH C01HBa0163B20.1+ SGN-E226674- 0.998 405 0.916 C PGS_C01HBa0163B20.1+_SGN-E226674- (64723 65127) Alignment (genomic DNA sequence = upper lines): AAGCACTCAC TAGCGCCAAT CCACCAGTCA AAGTCTATCT TGGACGTCCA TGGAAGGAGT 64782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCACTCAC TAGCGCCAAT CCACCAGTCA AAGTCTATCT TGGACGTCCA TGGAAGGAGT 62 TTTCCAAGAC CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT 64842 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTTCCAAGAC CATCATAATG CAATCAAACA TCGATGGATT CGTCGATCCA TCAGGATGGT 122 CACCATGGAA CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA 64902 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCATGGAA CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA 182 GAGGACCAGG TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA 64962 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGACCAGG TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA 242 TTTCAGGAGA CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT 65022 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCAGGAGA CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT 302 GGTTACCAAT GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC 65082 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTTACCAAT GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC 362 CATTCATCCT GTAATTTTTT CTAATTATTC AAAATTATAT TTCCT 65127 |||||||||| |||||||||| |||||||||| |||||||||| ||||| CATTCATCCT GTAATTTTTT CTAATTATTC AAAATTATAT TTCCT 407 hqPGS_C01HBa0163B20.1+_SGN-E226674- (64723 65127) ******************************************************************************** EST sequence 277 -strand 399 n (File: SGN-E220264-) 1 CAAAGTCTAT CTTGGACGTC CATGAAAGGA GTTTTCCAAG ACCATCATAA TGCAATCAAA 61 CATCGATGGA TTCGTCGATC CATCAGGATG GTCACCATGG AACACAACTG ATTTTGGAAT 121 ACACACATGT TTTTATGCAG AGTATCAGAA CAGAGGACCA GGTGCTGCAC TTGACAAAAG 181 AGTCTCCACA TGGAGAGGTT ACCAAAAGGA TATTTCAGGA GACGTTATTA ACAGCTTCAC 241 TGCCGGTAAA TTCATTAATA CACAACAGCC ATGGTTACCA ATGTTTGATA TTCCCTATGA 301 AGCTGGCATG ATGAAGGTGT AATTACATAT ACCATTCATC CTGTAATTTT TTCTAATTAT 361 TCAAAATTAT ATTTCCTATT TAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 64141 to 65911): Exon 1 64751 65127 ( 377 n); cDNA 1 377 ( 377 n); score: 0.995 PPA cDNA 382 399 MATCH C01HBa0163B20.1+ SGN-E220264- 0.995 377 0.945 C PGS_C01HBa0163B20.1+_SGN-E220264- (64751 65127) Alignment (genomic DNA sequence = upper lines): CAAAGTCTAT CTTGGACGTC CATGGAAGGA GTTTTCCAAG ACCATCATAA TGCAATCAAA 64810 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CAAAGTCTAT CTTGGACGTC CATGAAAGGA GTTTTCCAAG ACCATCATAA TGCAATCAAA 60 CATCGATGGA TTCGTTGATC CATCAGGATG GTCACCATGG AACACAACTG ATTTTGGAAT 64870 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CATCGATGGA TTCGTCGATC CATCAGGATG GTCACCATGG AACACAACTG ATTTTGGAAT 120 ACACACATGT TTTTATGCAG AGTATCAGAA CAGAGGACCA GGTGCTGCAC TTGACAAAAG 64930 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACACATGT TTTTATGCAG AGTATCAGAA CAGAGGACCA GGTGCTGCAC TTGACAAAAG 180 AGTCTCCACA TGGAGAGGTT ACCAAAAGGA TATTTCAGGA GACGTTATTA ACAGCTTCAC 64990 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTCCACA TGGAGAGGTT ACCAAAAGGA TATTTCAGGA GACGTTATTA ACAGCTTCAC 240 TGCCGGTAAA TTCATTAATA CACAACAGCC ATGGTTACCA ATGTTTGATA TTCCCTATGA 65050 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCGGTAAA TTCATTAATA CACAACAGCC ATGGTTACCA ATGTTTGATA TTCCCTATGA 300 AGCTGGCATG ATGAAGGTGT AATTACATAT ACCATTCATC CTGTAATTTT TTCTAATTAT 65110 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGGCATG ATGAAGGTGT AATTACATAT ACCATTCATC CTGTAATTTT TTCTAATTAT 360 TCAAAATTAT ATTTCCT 65127 |||||||||| ||||||| TCAAAATTAT ATTTCCT 377 hqPGS_C01HBa0163B20.1+_SGN-E220264- (64751 65127) ******************************************************************************** EST sequence 222 -strand 352 n (File: SGN-E216887-) 1 CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT CACCATGGAA 61 CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 121 TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 181 CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 241 GTTTGATATT CCCAATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 301 GTAAATTATT CTAATTATTC AAAAAAATAT TTCCTAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 64183 to 66176): Exon 1 64793 65127 ( 335 n); cDNA 1 335 ( 335 n); score: 0.985 PPA cDNA 336 352 MATCH C01HBa0163B20.1+ SGN-E216887- 0.985 335 0.952 C PGS_C01HBa0163B20.1+_SGN-E216887- (64793 65127) Alignment (genomic DNA sequence = upper lines): CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT CACCATGGAA 64852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT CACCATGGAA 60 CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 64912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 120 TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 64972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 180 CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 65032 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 240 GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 65092 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGATATT CCCAATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 300 GTAATTTTTT CTAATTATTC AAAATTATAT TTCCT 65127 |||| || || |||||||||| |||| |||| ||||| GTAAATTATT CTAATTATTC AAAAAAATAT TTCCT 335 hqPGS_C01HBa0163B20.1+_SGN-E216887- (64793 65127) ******************************************************************************** EST sequence 274 -strand 330 n (File: SGN-E220168-) 1 TTCGTCGATC CATCAGGATG GTCACCATGG AACACAAACT GATTTTGGAA TACACACATG 61 TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA GAGTCTCCAC 121 ATGGAGAGGT TACCAAAAGG ATATTTCAGG AAACGTTATT AACAGCTTCA CTGCCGGTAA 181 ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG AAGCTGGCAT 241 GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA TTCAAAATTA 301 TATTTCCTAT TTAAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 64157 to 65911): Exon 1 64821 65127 ( 307 n); cDNA 1 308 ( 308 n); score: 0.985 PPA cDNA 313 330 MATCH C01HBa0163B20.1+ SGN-E220168- 0.985 307 0.930 C PGS_C01HBa0163B20.1+_SGN-E220168- (64821 65127) Alignment (genomic DNA sequence = upper lines): TTCGTTGATC CATCAGGATG GTCACCATGG AACACAA-CT GATTTTGGAA TACACACATG 64879 ||||| |||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TTCGTCGATC CATCAGGATG GTCACCATGG AACACAAACT GATTTTGGAA TACACACATG 60 TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA GAGTCTCCAC 64939 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA GAGTCTCCAC 120 ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCA CTGCCGGTAA 64999 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| ATGGAGAGGT TACCAAAAGG ATATTTCAGG AAACGTTATT AACAGCTTCA CTGCCGGTAA 180 ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG AAGCTGGCAT 65059 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG AAGCTGGCAT 240 GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA TTCAAAATTA 65119 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA TTCAAAATTA 300 TATTTCCT 65127 |||||||| TATTTCCT 308 hqPGS_C01HBa0163B20.1+_SGN-E220168- (64821 65127) ******************************************************************************** EST sequence 250 -strand 321 n (File: SGN-E224767-) 1 CCCCATGGAA CCCAACTGAT TTTGGAATAC ACCCATGTTT TTATGCAGAG TATCAGAACA 61 GAGGACCAGG TGCTGCACTT GCCAAAAGAG TCTCCACATG GAGAGGTTCC CAAAAGGATA 121 TTTCAGGAGA CGTTATTAAC AGCTTCCCTG CCGGTAAATT CATTAATACC CCCCAGCCAT 181 GGTTACCAAT GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATCC 241 CATTCATCCT GTAATTTTTT CTAATTATTC AAAATTACCT TTCCTAAAAA AAAAAAAACC 301 CAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 64125 to 66159): Exon 1 64845 65127 ( 283 n); cDNA 3 285 ( 283 n); score: 0.961 PPA cDNA 286 299 MATCH C01HBa0163B20.1+ SGN-E224767- 0.961 283 0.882 C PGS_C01HBa0163B20.1+_SGN-E224767- (64845 65127) Alignment (genomic DNA sequence = upper lines): CCATGGAACA CAACTGATTT TGGAATACAC ACATGTTTTT ATGCAGAGTA TCAGAACAGA 64904 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CCATGGAACC CAACTGATTT TGGAATACAC CCATGTTTTT ATGCAGAGTA TCAGAACAGA 62 GGACCAGGTG CTGCACTTGA CAAAAGAGTC TCCACATGGA GAGGTTACCA AAAGGATATT 64964 |||||||||| ||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GGACCAGGTG CTGCACTTGC CAAAAGAGTC TCCACATGGA GAGGTTCCCA AAAGGATATT 122 TCAGGAGACG TTATTAACAG CTTCACTGCC GGTAAATTCA TTAATACACA ACAGCCATGG 65024 |||||||||| |||||||||| |||| ||||| |||||||||| ||||||| | ||||||||| TCAGGAGACG TTATTAACAG CTTCCCTGCC GGTAAATTCA TTAATACCCC CCAGCCATGG 182 TTACCAATGT TTGATATTCC CTATGAAGCT GGCATGATGA AGGTGTAATT ACATATACCA 65084 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTACCAATGT TTGATATTCC CTATGAAGCT GGCATGATGA AGGTGTAATT ACATATCCCA 242 TTCATCCTGT AATTTTTTCT AATTATTCAA AATTATATTT CCT 65127 |||||||||| |||||||||| |||||||||| ||||| ||| ||| TTCATCCTGT AATTTTTTCT AATTATTCAA AATTACCTTT CCT 285 hqPGS_C01HBa0163B20.1+_SGN-E224767- (64845 65127) ******************************************************************************** EST sequence 248 -strand 305 n (File: SGN-E224547-) 1 TGATTTTGGA ATACACACAT GTTTTTATGC AGAGTATCAG AACAGAGGGC CAGGTGTTGC 61 ACTTGACAAA AGAGTCTCCA CATGGAGAGG TTTCCAAAAG GATATTTCAG GAGACGTTAT 121 TAACAGCTTC ACTGCCGGTA AATTCATTAA TACACAACAG CCATGGTTAC CAATGTTTGA 181 TATTCCCTAT GAAGCTGGCA TGATGAAGGT GTAATTACAT ATACCATTCA TCCTGTAATT 241 TTTTCTAATT ATTCAAAATT ATCTTTCCTA GAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 301 AAAAA Predicted gene structure (within gDNA segment 64249 to 66150): Exon 1 64859 65127 ( 269 n); cDNA 1 269 ( 269 n); score: 0.985 PPA cDNA 270 305 MATCH C01HBa0163B20.1+ SGN-E224547- 0.985 269 0.882 C PGS_C01HBa0163B20.1+_SGN-E224547- (64859 65127) Alignment (genomic DNA sequence = upper lines): TGATTTTGGA ATACACACAT GTTTTTATGC AGAGTATCAG AACAGAGGAC CAGGTGCTGC 64918 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||| ||| TGATTTTGGA ATACACACAT GTTTTTATGC AGAGTATCAG AACAGAGGGC CAGGTGTTGC 60 ACTTGACAAA AGAGTCTCCA CATGGAGAGG TTACCAAAAG GATATTTCAG GAGACGTTAT 64978 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| ACTTGACAAA AGAGTCTCCA CATGGAGAGG TTTCCAAAAG GATATTTCAG GAGACGTTAT 120 TAACAGCTTC ACTGCCGGTA AATTCATTAA TACACAACAG CCATGGTTAC CAATGTTTGA 65038 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAGCTTC ACTGCCGGTA AATTCATTAA TACACAACAG CCATGGTTAC CAATGTTTGA 180 TATTCCCTAT GAAGCTGGCA TGATGAAGGT GTAATTACAT ATACCATTCA TCCTGTAATT 65098 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTCCCTAT GAAGCTGGCA TGATGAAGGT GTAATTACAT ATACCATTCA TCCTGTAATT 240 TTTTCTAATT ATTCAAAATT ATATTTCCT 65127 |||||||||| |||||||||| || |||||| TTTTCTAATT ATTCAAAATT ATCTTTCCT 269 hqPGS_C01HBa0163B20.1+_SGN-E224547- (64859 65127) ******************************************************************************** EST sequence 30 -strand 637 n (File: SGN-E540107-) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TGATGTCAAA AAAAAAA Predicted gene structure (within gDNA segment 73425 to 66458): Exon 1 72025 71957 ( 69 n); cDNA 80 148 ( 69 n); score: 0.971 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.96), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 149 166 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 (s: 0), Pa: 0.000 (s: 0) Exon 3 67757 67721 ( 37 n); cDNA 167 200 ( 34 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 4 67357 67314 ( 44 n); cDNA 201 242 ( 42 n); score: 0.727 PPA cDNA 628 637 MATCH C01HBa0163B20.1- SGN-E540107- 0.971 168 0.264 C PGS_C01HBa0163B20.1-_SGN-E540107- (72025 71957,70349 70332,67757 67721,67357 67314) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT CATTCATCTA GTGTGTGTGC GTGAATTCGA 71966 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAGT TTAGACTTTC CTTGAGAAGT GACCATGCAA GCTTGTGTAT CACCTGGTTT 71906 |||||||| TCCTAACAA. .......... .......... .......... .......... .......... 148 CCTCACAATC AATTGGCAGT TTTGGAAGCA TCACTAAAAA TGAAATCAAT GTTGCCTGTA 71846 .......... .......... .......... .......... .......... .......... 148 ATGATAGAGT CACGGAACAA TTATCTGTAC GAGTGAGCGT ATAGGATGTA TTGGAAACCA 71786 .......... .......... .......... .......... .......... .......... 148 TCGATTTTGT AGTTGTAGAC AATTGCTTTA TCATCATTAA TCCTCAATGC AACAACTTGT 71726 .......... .......... .......... .......... .......... .......... 148 TCTTTTACTG GTCCTGCTCT GTTTTCAATA CCGATGTCCC TGATAACGAA CCTTTCACCA 71666 .......... .......... .......... .......... .......... .......... 148 GAAACACCAA GGGAGGTTGT ATGCCATTTT ACTACACCGC CACCATTCTT ACTCCCTTGT 71606 .......... .......... .......... .......... .......... .......... 148 CACCCAGTGA CAGTGGCGGT AGCCATAAAT TTCACAAAGA GTGTCCAAAA ATTGTATAGG 71546 .......... .......... .......... .......... .......... .......... 148 GGTATATTTT TTCTTTTGGA TGAATGAGTG CACTAGAAAT TTTAAAAATT AAAGTACGTA 71486 .......... .......... .......... .......... .......... .......... 148 ATATACATGA AAATTTTTGG AAAGAAAAGA TGAAAAGATG AATGAGTGGA CTAGAAAATT 71426 .......... .......... .......... .......... .......... .......... 148 TAAAAATTAA ACTATGTAGT ATACATGAAA TTTGTGGGGG GGGGGGGGGA TACCAAATAT 71366 .......... .......... .......... .......... .......... .......... 148 ATATGAATTT TTTTTTTAAA AAAACGAGGA AAAGCTACTG CTAGGGAAAT TTGAACTCAC 71306 .......... .......... .......... .......... .......... .......... 148 AAGCGCTTAA ATGTTTGGCT CTTTCAAGAC AACTTAAACC ACTAGGCTGC ACCTTAAACC 71246 .......... .......... .......... .......... .......... .......... 148 ACTAGGCTAC ACCTTGTTGT GTTAAGGGTG TCCAAAATAA ATTAGTTAAC CATTTTGTAT 71186 .......... .......... .......... .......... .......... .......... 148 ATTATTTTAC TTGTATATAC TATGTAATTT ACCGACGAAG GGTGTCCAAT AGTATATAGC 71126 .......... .......... .......... .......... .......... .......... 148 TACGCCCCTG CCTAGTGATT ATGGTCTTGG TTGGCCCTTC ACCAATAAAC ACAACATTTG 71066 .......... .......... .......... .......... .......... .......... 148 CCTGTCTTTT CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA 71006 .......... .......... .......... .......... .......... .......... 148 GGAGTTGTAT AGTTCATGAG GACAGCGTTA AGTTCTCCTG AAATGGTCTT GTATTGTCCG 70946 .......... .......... .......... .......... .......... .......... 148 TCACCACTTG CAGAAACCAC AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG 70886 .......... .......... .......... .......... .......... .......... 148 CTACTGGCTT CAACAAACCA GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT 70826 .......... .......... .......... .......... .......... .......... 148 TTTGTGATCG TTTCACCGAA AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCTCTTT 70766 .......... .......... .......... .......... .......... .......... 148 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 .......... .......... .......... .......... .......... .......... 148 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 .......... .......... .......... .......... .......... .......... 148 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 .......... .......... .......... .......... .......... .......... 148 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 148 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 148 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 148 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 | .......... .......... .......... .......... .......... ......ATGG 152 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 | ||| | || || | TATCAGAGCT AAGG...... .......... .......... .......... .......... 166 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 166 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 166 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 166 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 166 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 166 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 166 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 166 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 166 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 166 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 166 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 166 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 166 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 166 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 166 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 166 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 166 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 166 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 166 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 166 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 166 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCACTGTG GCACCAGCGC ACCTCTTATG 69026 .......... .......... .......... .......... .......... .......... 166 CACATGTCTA AACCATCTTA GTCTCGCTTC CCACATCTTG TTCTTCACAT AGGTAACTCT 68966 .......... .......... .......... .......... .......... .......... 166 CCTCTTCTCC CAGATAACCT CATTCTTAAT CTTATCGCTT CTAGTATGCT CACACATTTA 68906 .......... .......... .......... .......... .......... .......... 166 TCTCAACATA TGCATCTACG AAACATGCAT CTTTTGTACA TATGAGTGCT TGACTGGCCA 68846 .......... .......... .......... .......... .......... .......... 166 ACACTCCAAC CTACATAACA AGAACACTCT AAACACCAAT TTGTAGAACT TACCTTTAAG 68786 .......... .......... .......... .......... .......... .......... 166 TCTAGGTGGT ACCTTCTTAT CATACTAAAC TCTAGAGGCA AGCCTCTATT TCATCCATGT 68726 .......... .......... .......... .......... .......... .......... 166 TGCTCTAGTG GGATGTGTGA CATCATCATT GATGTGCTCG TTACCCTGTA TTATGAGCCC 68666 .......... .......... .......... .......... .......... .......... 166 AAGATACTTA AAACTTTCTG TCTTAGAAAT AGTTTAAGTG GCAAGCCTTA CTTCCACGTT 68606 .......... .......... .......... .......... .......... .......... 166 CACTTCATAT GACACGCTAT TGAATTTGCA CTCCAAATAT TCTATTTTGT TCATGCTCAA 68546 .......... .......... .......... .......... .......... .......... 166 CATGGACCCT TCGAACTCTA TAGTCTCTTT CCAAATCTCC AACATAGCAT TAACTCAATT 68486 .......... .......... .......... .......... .......... .......... 166 TGGTGTCTAA TCAATCAGTA TTATGTCTTC TGCAAATAAT ATACACAGAG GAACCTCTTC 68426 .......... .......... .......... .......... .......... .......... 166 CTGAATAGAG CACATCAGTT CATCTATCAC CAAGACAAAT AGGAAAGCAC TAAGAATTGA 68366 .......... .......... .......... .......... .......... .......... 166 TCCCTTAATT GAAGTGTAGC CTCATCGTAA CTGGTAAGTG CTCTGAGTCT TTTCCGATTG 68306 .......... .......... .......... .......... .......... .......... 166 TTTTATGATG ACCCAGACCG TCGTTATTGG CACCTACACT ACAACTTGGT GGGAGAACCA 68246 .......... .......... .......... .......... .......... .......... 166 CTACTAGTTA TCAACTAAAG CAATAAACCT ACAAACTAAG GTATTAACGT TACGGAAGCA 68186 .......... .......... .......... .......... .......... .......... 166 AGTTAAATAA CTAAAGACAA TGTTCCATTT CTAAACAATG GTATAACAAC TAACTAATAA 68126 .......... .......... .......... .......... .......... .......... 166 TGTGGAAGAT AAACCTAGAA CCTGAAAGTC AATGTACTAA AATTAGAAAT AAGAACCAAA 68066 .......... .......... .......... .......... .......... .......... 166 TCTAACAATA ATTTCTTGTG AACTATCTAA CTAACTAAAA CAAGGTCTAC GTCCAAAAAT 68006 .......... .......... .......... .......... .......... .......... 166 GATGGACATA GACTAAAGAA AATTTTATGG CAATTCGAAC GATGTGTCTC ACCCTTGAAC 67946 .......... .......... .......... .......... .......... .......... 166 TCGAAGTGAT CATCGATCTC CTAAGAGAGG TCTATCAACA GTCGTGCAAG ATGCGCTGTA 67886 .......... .......... .......... .......... .......... .......... 166 CTCAACAAAA ATATGATCAA GTGCAGAATC GGTACACAAC CACGGTGTAG TGGTAAGTCA 67826 .......... .......... .......... .......... .......... .......... 166 CGTGGCTATC CCACTAGTGT AACATAAACA AGCAATTACA GGATTATAAA ACATGCATAA 67766 .......... .......... .......... .......... .......... .......... 166 ATATCAACAT ATTCAATACT ATCACAAGAA CAATATCACA GTTCACATGT TATATCATGT 67706 | |||||| || ||||| |||| || | | |||| ........AG ATTCAACACG ATCAC-AGAA -GAT-GGATA GTTCG..... .......... 200 AGTTGGTCCT CTCACGGAAC CCAAAATCAA ATTGTTAGCA TGCCGGAATG TGGCTATCAA 67646 .......... .......... .......... .......... .......... .......... 200 ATCCATTTTA TGGAAAACAT GAAAATCGAT CCCAATTAGC ATGTCGAAAT GTGAAAATCC 67586 .......... .......... .......... .......... .......... .......... 200 GATTCAAGTT AGAGTGTCGT AACGTGGCAG CTGATCCCAA TCACATATTA CAATAACACA 67526 .......... .......... .......... .......... .......... .......... 200 TCAAGATCAC ACGTTCAAGT CATAATTTCA TTGTGTCAAT ATTCATATTT CTCATTTCAA 67466 .......... .......... .......... .......... .......... .......... 200 CATCTATGAT CAATATTGTG TTATGTATAC ACATACAAGT ATCATAACGA AGCAAAGCAA 67406 .......... .......... .......... .......... .......... .......... 200 ATGTATATCA TACAATAATA GAATCAAAAC CATCACCAAC CTTAAAACAA GCTTGAAACC 67346 || ||||| || .......... .......... .......... .......... ........AA GCTTGGAA-T 211 CTAGACAGAT TGATCCATTC CTTTCCAGAT TC 67314 | ||| || | |||| |||| || ||| | || CGAGA-AGTT TGATGGATTC AATTTCAGTT TC 242 hqPGS_C01HBa0163B20.1-_SGN-E540107- (72025 71957,70349 70332,67757 67721,67357 67314) ******************************************************************************** EST sequence 32 -strand 636 n (File: SGN-E540114-) 1 TAATTTTTGA GTTGCCGCGA CGTTTCCCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAAATAA GGCGTTGATT TTGCCTCTTT TAAGAA Predicted gene structure (within gDNA segment 73425 to 66468): Exon 1 72025 71957 ( 69 n); cDNA 80 148 ( 69 n); score: 0.971 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.96), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 149 166 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 (s: 0), Pa: 0.000 (s: 0) Exon 3 67757 67721 ( 37 n); cDNA 167 200 ( 34 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 4 67357 67314 ( 44 n); cDNA 201 242 ( 42 n); score: 0.727 MATCH C01HBa0163B20.1- SGN-E540114- 0.971 168 0.264 C PGS_C01HBa0163B20.1-_SGN-E540114- (72025 71957,70349 70332,67757 67721,67357 67314) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT CATTCATCTA GTGTGTGTGC GTGAATTCGA 71966 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAGT TTAGACTTTC CTTGAGAAGT GACCATGCAA GCTTGTGTAT CACCTGGTTT 71906 |||||||| TCCTAACAA. .......... .......... .......... .......... .......... 148 CCTCACAATC AATTGGCAGT TTTGGAAGCA TCACTAAAAA TGAAATCAAT GTTGCCTGTA 71846 .......... .......... .......... .......... .......... .......... 148 ATGATAGAGT CACGGAACAA TTATCTGTAC GAGTGAGCGT ATAGGATGTA TTGGAAACCA 71786 .......... .......... .......... .......... .......... .......... 148 TCGATTTTGT AGTTGTAGAC AATTGCTTTA TCATCATTAA TCCTCAATGC AACAACTTGT 71726 .......... .......... .......... .......... .......... .......... 148 TCTTTTACTG GTCCTGCTCT GTTTTCAATA CCGATGTCCC TGATAACGAA CCTTTCACCA 71666 .......... .......... .......... .......... .......... .......... 148 GAAACACCAA GGGAGGTTGT ATGCCATTTT ACTACACCGC CACCATTCTT ACTCCCTTGT 71606 .......... .......... .......... .......... .......... .......... 148 CACCCAGTGA CAGTGGCGGT AGCCATAAAT TTCACAAAGA GTGTCCAAAA ATTGTATAGG 71546 .......... .......... .......... .......... .......... .......... 148 GGTATATTTT TTCTTTTGGA TGAATGAGTG CACTAGAAAT TTTAAAAATT AAAGTACGTA 71486 .......... .......... .......... .......... .......... .......... 148 ATATACATGA AAATTTTTGG AAAGAAAAGA TGAAAAGATG AATGAGTGGA CTAGAAAATT 71426 .......... .......... .......... .......... .......... .......... 148 TAAAAATTAA ACTATGTAGT ATACATGAAA TTTGTGGGGG GGGGGGGGGA TACCAAATAT 71366 .......... .......... .......... .......... .......... .......... 148 ATATGAATTT TTTTTTTAAA AAAACGAGGA AAAGCTACTG CTAGGGAAAT TTGAACTCAC 71306 .......... .......... .......... .......... .......... .......... 148 AAGCGCTTAA ATGTTTGGCT CTTTCAAGAC AACTTAAACC ACTAGGCTGC ACCTTAAACC 71246 .......... .......... .......... .......... .......... .......... 148 ACTAGGCTAC ACCTTGTTGT GTTAAGGGTG TCCAAAATAA ATTAGTTAAC CATTTTGTAT 71186 .......... .......... .......... .......... .......... .......... 148 ATTATTTTAC TTGTATATAC TATGTAATTT ACCGACGAAG GGTGTCCAAT AGTATATAGC 71126 .......... .......... .......... .......... .......... .......... 148 TACGCCCCTG CCTAGTGATT ATGGTCTTGG TTGGCCCTTC ACCAATAAAC ACAACATTTG 71066 .......... .......... .......... .......... .......... .......... 148 CCTGTCTTTT CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA 71006 .......... .......... .......... .......... .......... .......... 148 GGAGTTGTAT AGTTCATGAG GACAGCGTTA AGTTCTCCTG AAATGGTCTT GTATTGTCCG 70946 .......... .......... .......... .......... .......... .......... 148 TCACCACTTG CAGAAACCAC AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG 70886 .......... .......... .......... .......... .......... .......... 148 CTACTGGCTT CAACAAACCA GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT 70826 .......... .......... .......... .......... .......... .......... 148 TTTGTGATCG TTTCACCGAA AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCTCTTT 70766 .......... .......... .......... .......... .......... .......... 148 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 .......... .......... .......... .......... .......... .......... 148 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 .......... .......... .......... .......... .......... .......... 148 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 .......... .......... .......... .......... .......... .......... 148 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 148 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 148 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 148 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 | .......... .......... .......... .......... .......... ......ATGG 152 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 | ||| | || || | TATCAGAGCT AAGG...... .......... .......... .......... .......... 166 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 166 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 166 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 166 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 166 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 166 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 166 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 166 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 166 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 166 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 166 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 166 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 166 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 166 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 166 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 166 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 166 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 166 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 166 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 166 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 166 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCACTGTG GCACCAGCGC ACCTCTTATG 69026 .......... .......... .......... .......... .......... .......... 166 CACATGTCTA AACCATCTTA GTCTCGCTTC CCACATCTTG TTCTTCACAT AGGTAACTCT 68966 .......... .......... .......... .......... .......... .......... 166 CCTCTTCTCC CAGATAACCT CATTCTTAAT CTTATCGCTT CTAGTATGCT CACACATTTA 68906 .......... .......... .......... .......... .......... .......... 166 TCTCAACATA TGCATCTACG AAACATGCAT CTTTTGTACA TATGAGTGCT TGACTGGCCA 68846 .......... .......... .......... .......... .......... .......... 166 ACACTCCAAC CTACATAACA AGAACACTCT AAACACCAAT TTGTAGAACT TACCTTTAAG 68786 .......... .......... .......... .......... .......... .......... 166 TCTAGGTGGT ACCTTCTTAT CATACTAAAC TCTAGAGGCA AGCCTCTATT TCATCCATGT 68726 .......... .......... .......... .......... .......... .......... 166 TGCTCTAGTG GGATGTGTGA CATCATCATT GATGTGCTCG TTACCCTGTA TTATGAGCCC 68666 .......... .......... .......... .......... .......... .......... 166 AAGATACTTA AAACTTTCTG TCTTAGAAAT AGTTTAAGTG GCAAGCCTTA CTTCCACGTT 68606 .......... .......... .......... .......... .......... .......... 166 CACTTCATAT GACACGCTAT TGAATTTGCA CTCCAAATAT TCTATTTTGT TCATGCTCAA 68546 .......... .......... .......... .......... .......... .......... 166 CATGGACCCT TCGAACTCTA TAGTCTCTTT CCAAATCTCC AACATAGCAT TAACTCAATT 68486 .......... .......... .......... .......... .......... .......... 166 TGGTGTCTAA TCAATCAGTA TTATGTCTTC TGCAAATAAT ATACACAGAG GAACCTCTTC 68426 .......... .......... .......... .......... .......... .......... 166 CTGAATAGAG CACATCAGTT CATCTATCAC CAAGACAAAT AGGAAAGCAC TAAGAATTGA 68366 .......... .......... .......... .......... .......... .......... 166 TCCCTTAATT GAAGTGTAGC CTCATCGTAA CTGGTAAGTG CTCTGAGTCT TTTCCGATTG 68306 .......... .......... .......... .......... .......... .......... 166 TTTTATGATG ACCCAGACCG TCGTTATTGG CACCTACACT ACAACTTGGT GGGAGAACCA 68246 .......... .......... .......... .......... .......... .......... 166 CTACTAGTTA TCAACTAAAG CAATAAACCT ACAAACTAAG GTATTAACGT TACGGAAGCA 68186 .......... .......... .......... .......... .......... .......... 166 AGTTAAATAA CTAAAGACAA TGTTCCATTT CTAAACAATG GTATAACAAC TAACTAATAA 68126 .......... .......... .......... .......... .......... .......... 166 TGTGGAAGAT AAACCTAGAA CCTGAAAGTC AATGTACTAA AATTAGAAAT AAGAACCAAA 68066 .......... .......... .......... .......... .......... .......... 166 TCTAACAATA ATTTCTTGTG AACTATCTAA CTAACTAAAA CAAGGTCTAC GTCCAAAAAT 68006 .......... .......... .......... .......... .......... .......... 166 GATGGACATA GACTAAAGAA AATTTTATGG CAATTCGAAC GATGTGTCTC ACCCTTGAAC 67946 .......... .......... .......... .......... .......... .......... 166 TCGAAGTGAT CATCGATCTC CTAAGAGAGG TCTATCAACA GTCGTGCAAG ATGCGCTGTA 67886 .......... .......... .......... .......... .......... .......... 166 CTCAACAAAA ATATGATCAA GTGCAGAATC GGTACACAAC CACGGTGTAG TGGTAAGTCA 67826 .......... .......... .......... .......... .......... .......... 166 CGTGGCTATC CCACTAGTGT AACATAAACA AGCAATTACA GGATTATAAA ACATGCATAA 67766 .......... .......... .......... .......... .......... .......... 166 ATATCAACAT ATTCAATACT ATCACAAGAA CAATATCACA GTTCACATGT TATATCATGT 67706 | |||||| || ||||| |||| || | | |||| ........AG ATTCAACACG ATCAC-AGAA -GAT-GGATA GTTCG..... .......... 200 AGTTGGTCCT CTCACGGAAC CCAAAATCAA ATTGTTAGCA TGCCGGAATG TGGCTATCAA 67646 .......... .......... .......... .......... .......... .......... 200 ATCCATTTTA TGGAAAACAT GAAAATCGAT CCCAATTAGC ATGTCGAAAT GTGAAAATCC 67586 .......... .......... .......... .......... .......... .......... 200 GATTCAAGTT AGAGTGTCGT AACGTGGCAG CTGATCCCAA TCACATATTA CAATAACACA 67526 .......... .......... .......... .......... .......... .......... 200 TCAAGATCAC ACGTTCAAGT CATAATTTCA TTGTGTCAAT ATTCATATTT CTCATTTCAA 67466 .......... .......... .......... .......... .......... .......... 200 CATCTATGAT CAATATTGTG TTATGTATAC ACATACAAGT ATCATAACGA AGCAAAGCAA 67406 .......... .......... .......... .......... .......... .......... 200 ATGTATATCA TACAATAATA GAATCAAAAC CATCACCAAC CTTAAAACAA GCTTGAAACC 67346 || ||||| || .......... .......... .......... .......... ........AA GCTTGGAA-T 211 CTAGACAGAT TGATCCATTC CTTTCCAGAT TC 67314 | ||| || | |||| |||| || ||| | || CGAGA-AGTT TGATGGATTC AATTTCAGTT TC 242 hqPGS_C01HBa0163B20.1-_SGN-E540114- (72025 71957,70349 70332,67757 67721,67357 67314) ******************************************************************************** EST sequence 227 +strand 638 n (File: SGN-E540110+) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TTGATGTCAA AAAAAAAA Predicted gene structure (within gDNA segment 73415 to 66438): Exon 1 72025 71957 ( 69 n); cDNA 80 148 ( 69 n); score: 0.971 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.96), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 149 166 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 (s: 0), Pa: 0.000 (s: 0) Exon 3 67757 67721 ( 37 n); cDNA 167 200 ( 34 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 4 67357 67314 ( 44 n); cDNA 201 242 ( 42 n); score: 0.727 PPA cDNA 629 638 MATCH C01HBa0163B20.1- SGN-E540110+ 0.971 168 0.263 C PGS_C01HBa0163B20.1-_SGN-E540110+ (72025 71957,70349 70332,67757 67721,67357 67314) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT CATTCATCTA GTGTGTGTGC GTGAATTCGA 71966 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAGT TTAGACTTTC CTTGAGAAGT GACCATGCAA GCTTGTGTAT CACCTGGTTT 71906 |||||||| TCCTAACAA. .......... .......... .......... .......... .......... 148 CCTCACAATC AATTGGCAGT TTTGGAAGCA TCACTAAAAA TGAAATCAAT GTTGCCTGTA 71846 .......... .......... .......... .......... .......... .......... 148 ATGATAGAGT CACGGAACAA TTATCTGTAC GAGTGAGCGT ATAGGATGTA TTGGAAACCA 71786 .......... .......... .......... .......... .......... .......... 148 TCGATTTTGT AGTTGTAGAC AATTGCTTTA TCATCATTAA TCCTCAATGC AACAACTTGT 71726 .......... .......... .......... .......... .......... .......... 148 TCTTTTACTG GTCCTGCTCT GTTTTCAATA CCGATGTCCC TGATAACGAA CCTTTCACCA 71666 .......... .......... .......... .......... .......... .......... 148 GAAACACCAA GGGAGGTTGT ATGCCATTTT ACTACACCGC CACCATTCTT ACTCCCTTGT 71606 .......... .......... .......... .......... .......... .......... 148 CACCCAGTGA CAGTGGCGGT AGCCATAAAT TTCACAAAGA GTGTCCAAAA ATTGTATAGG 71546 .......... .......... .......... .......... .......... .......... 148 GGTATATTTT TTCTTTTGGA TGAATGAGTG CACTAGAAAT TTTAAAAATT AAAGTACGTA 71486 .......... .......... .......... .......... .......... .......... 148 ATATACATGA AAATTTTTGG AAAGAAAAGA TGAAAAGATG AATGAGTGGA CTAGAAAATT 71426 .......... .......... .......... .......... .......... .......... 148 TAAAAATTAA ACTATGTAGT ATACATGAAA TTTGTGGGGG GGGGGGGGGA TACCAAATAT 71366 .......... .......... .......... .......... .......... .......... 148 ATATGAATTT TTTTTTTAAA AAAACGAGGA AAAGCTACTG CTAGGGAAAT TTGAACTCAC 71306 .......... .......... .......... .......... .......... .......... 148 AAGCGCTTAA ATGTTTGGCT CTTTCAAGAC AACTTAAACC ACTAGGCTGC ACCTTAAACC 71246 .......... .......... .......... .......... .......... .......... 148 ACTAGGCTAC ACCTTGTTGT GTTAAGGGTG TCCAAAATAA ATTAGTTAAC CATTTTGTAT 71186 .......... .......... .......... .......... .......... .......... 148 ATTATTTTAC TTGTATATAC TATGTAATTT ACCGACGAAG GGTGTCCAAT AGTATATAGC 71126 .......... .......... .......... .......... .......... .......... 148 TACGCCCCTG CCTAGTGATT ATGGTCTTGG TTGGCCCTTC ACCAATAAAC ACAACATTTG 71066 .......... .......... .......... .......... .......... .......... 148 CCTGTCTTTT CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA 71006 .......... .......... .......... .......... .......... .......... 148 GGAGTTGTAT AGTTCATGAG GACAGCGTTA AGTTCTCCTG AAATGGTCTT GTATTGTCCG 70946 .......... .......... .......... .......... .......... .......... 148 TCACCACTTG CAGAAACCAC AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG 70886 .......... .......... .......... .......... .......... .......... 148 CTACTGGCTT CAACAAACCA GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT 70826 .......... .......... .......... .......... .......... .......... 148 TTTGTGATCG TTTCACCGAA AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCTCTTT 70766 .......... .......... .......... .......... .......... .......... 148 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 .......... .......... .......... .......... .......... .......... 148 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 .......... .......... .......... .......... .......... .......... 148 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 .......... .......... .......... .......... .......... .......... 148 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 148 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 148 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 148 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 | .......... .......... .......... .......... .......... ......ATGG 152 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 | ||| | || || | TATCAGAGCT AAGG...... .......... .......... .......... .......... 166 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 166 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 166 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 166 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 166 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 166 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 166 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 166 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 166 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 166 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 166 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 166 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 166 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 166 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 166 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 166 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 166 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 166 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 166 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 166 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 166 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCACTGTG GCACCAGCGC ACCTCTTATG 69026 .......... .......... .......... .......... .......... .......... 166 CACATGTCTA AACCATCTTA GTCTCGCTTC CCACATCTTG TTCTTCACAT AGGTAACTCT 68966 .......... .......... .......... .......... .......... .......... 166 CCTCTTCTCC CAGATAACCT CATTCTTAAT CTTATCGCTT CTAGTATGCT CACACATTTA 68906 .......... .......... .......... .......... .......... .......... 166 TCTCAACATA TGCATCTACG AAACATGCAT CTTTTGTACA TATGAGTGCT TGACTGGCCA 68846 .......... .......... .......... .......... .......... .......... 166 ACACTCCAAC CTACATAACA AGAACACTCT AAACACCAAT TTGTAGAACT TACCTTTAAG 68786 .......... .......... .......... .......... .......... .......... 166 TCTAGGTGGT ACCTTCTTAT CATACTAAAC TCTAGAGGCA AGCCTCTATT TCATCCATGT 68726 .......... .......... .......... .......... .......... .......... 166 TGCTCTAGTG GGATGTGTGA CATCATCATT GATGTGCTCG TTACCCTGTA TTATGAGCCC 68666 .......... .......... .......... .......... .......... .......... 166 AAGATACTTA AAACTTTCTG TCTTAGAAAT AGTTTAAGTG GCAAGCCTTA CTTCCACGTT 68606 .......... .......... .......... .......... .......... .......... 166 CACTTCATAT GACACGCTAT TGAATTTGCA CTCCAAATAT TCTATTTTGT TCATGCTCAA 68546 .......... .......... .......... .......... .......... .......... 166 CATGGACCCT TCGAACTCTA TAGTCTCTTT CCAAATCTCC AACATAGCAT TAACTCAATT 68486 .......... .......... .......... .......... .......... .......... 166 TGGTGTCTAA TCAATCAGTA TTATGTCTTC TGCAAATAAT ATACACAGAG GAACCTCTTC 68426 .......... .......... .......... .......... .......... .......... 166 CTGAATAGAG CACATCAGTT CATCTATCAC CAAGACAAAT AGGAAAGCAC TAAGAATTGA 68366 .......... .......... .......... .......... .......... .......... 166 TCCCTTAATT GAAGTGTAGC CTCATCGTAA CTGGTAAGTG CTCTGAGTCT TTTCCGATTG 68306 .......... .......... .......... .......... .......... .......... 166 TTTTATGATG ACCCAGACCG TCGTTATTGG CACCTACACT ACAACTTGGT GGGAGAACCA 68246 .......... .......... .......... .......... .......... .......... 166 CTACTAGTTA TCAACTAAAG CAATAAACCT ACAAACTAAG GTATTAACGT TACGGAAGCA 68186 .......... .......... .......... .......... .......... .......... 166 AGTTAAATAA CTAAAGACAA TGTTCCATTT CTAAACAATG GTATAACAAC TAACTAATAA 68126 .......... .......... .......... .......... .......... .......... 166 TGTGGAAGAT AAACCTAGAA CCTGAAAGTC AATGTACTAA AATTAGAAAT AAGAACCAAA 68066 .......... .......... .......... .......... .......... .......... 166 TCTAACAATA ATTTCTTGTG AACTATCTAA CTAACTAAAA CAAGGTCTAC GTCCAAAAAT 68006 .......... .......... .......... .......... .......... .......... 166 GATGGACATA GACTAAAGAA AATTTTATGG CAATTCGAAC GATGTGTCTC ACCCTTGAAC 67946 .......... .......... .......... .......... .......... .......... 166 TCGAAGTGAT CATCGATCTC CTAAGAGAGG TCTATCAACA GTCGTGCAAG ATGCGCTGTA 67886 .......... .......... .......... .......... .......... .......... 166 CTCAACAAAA ATATGATCAA GTGCAGAATC GGTACACAAC CACGGTGTAG TGGTAAGTCA 67826 .......... .......... .......... .......... .......... .......... 166 CGTGGCTATC CCACTAGTGT AACATAAACA AGCAATTACA GGATTATAAA ACATGCATAA 67766 .......... .......... .......... .......... .......... .......... 166 ATATCAACAT ATTCAATACT ATCACAAGAA CAATATCACA GTTCACATGT TATATCATGT 67706 | |||||| || ||||| |||| || | | |||| ........AG ATTCAACACG ATCAC-AGAA -GAT-GGATA GTTCG..... .......... 200 AGTTGGTCCT CTCACGGAAC CCAAAATCAA ATTGTTAGCA TGCCGGAATG TGGCTATCAA 67646 .......... .......... .......... .......... .......... .......... 200 ATCCATTTTA TGGAAAACAT GAAAATCGAT CCCAATTAGC ATGTCGAAAT GTGAAAATCC 67586 .......... .......... .......... .......... .......... .......... 200 GATTCAAGTT AGAGTGTCGT AACGTGGCAG CTGATCCCAA TCACATATTA CAATAACACA 67526 .......... .......... .......... .......... .......... .......... 200 TCAAGATCAC ACGTTCAAGT CATAATTTCA TTGTGTCAAT ATTCATATTT CTCATTTCAA 67466 .......... .......... .......... .......... .......... .......... 200 CATCTATGAT CAATATTGTG TTATGTATAC ACATACAAGT ATCATAACGA AGCAAAGCAA 67406 .......... .......... .......... .......... .......... .......... 200 ATGTATATCA TACAATAATA GAATCAAAAC CATCACCAAC CTTAAAACAA GCTTGAAACC 67346 || ||||| || .......... .......... .......... .......... ........AA GCTTGGAA-T 211 CTAGACAGAT TGATCCATTC CTTTCCAGAT TC 67314 | ||| || | |||| |||| || ||| | || CGAGA-AGTT TGATGGATTC AATTTCAGTT TC 242 hqPGS_C01HBa0163B20.1-_SGN-E540110+ (72025 71957,70349 70332,67757 67721,67357 67314) ******************************************************************************** EST sequence 229 +strand 632 n (File: SGN-E548332+) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CATCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACTA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TTTATGTCAA AA Predicted gene structure (within gDNA segment 73415 to 66498): Exon 1 72025 71957 ( 69 n); cDNA 80 148 ( 69 n); score: 0.971 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.96), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 149 166 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 (s: 0), Pa: 0.000 (s: 0) Exon 3 67757 67721 ( 37 n); cDNA 167 200 ( 34 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 4 67357 67314 ( 44 n); cDNA 201 242 ( 42 n); score: 0.727 MATCH C01HBa0163B20.1- SGN-E548332+ 0.971 168 0.266 C PGS_C01HBa0163B20.1-_SGN-E548332+ (72025 71957,70349 70332,67757 67721,67357 67314) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT CATTCATCTA GTGTGTGTGC GTGAATTCGA 71966 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAGT TTAGACTTTC CTTGAGAAGT GACCATGCAA GCTTGTGTAT CACCTGGTTT 71906 |||||||| TCCTAACAA. .......... .......... .......... .......... .......... 148 CCTCACAATC AATTGGCAGT TTTGGAAGCA TCACTAAAAA TGAAATCAAT GTTGCCTGTA 71846 .......... .......... .......... .......... .......... .......... 148 ATGATAGAGT CACGGAACAA TTATCTGTAC GAGTGAGCGT ATAGGATGTA TTGGAAACCA 71786 .......... .......... .......... .......... .......... .......... 148 TCGATTTTGT AGTTGTAGAC AATTGCTTTA TCATCATTAA TCCTCAATGC AACAACTTGT 71726 .......... .......... .......... .......... .......... .......... 148 TCTTTTACTG GTCCTGCTCT GTTTTCAATA CCGATGTCCC TGATAACGAA CCTTTCACCA 71666 .......... .......... .......... .......... .......... .......... 148 GAAACACCAA GGGAGGTTGT ATGCCATTTT ACTACACCGC CACCATTCTT ACTCCCTTGT 71606 .......... .......... .......... .......... .......... .......... 148 CACCCAGTGA CAGTGGCGGT AGCCATAAAT TTCACAAAGA GTGTCCAAAA ATTGTATAGG 71546 .......... .......... .......... .......... .......... .......... 148 GGTATATTTT TTCTTTTGGA TGAATGAGTG CACTAGAAAT TTTAAAAATT AAAGTACGTA 71486 .......... .......... .......... .......... .......... .......... 148 ATATACATGA AAATTTTTGG AAAGAAAAGA TGAAAAGATG AATGAGTGGA CTAGAAAATT 71426 .......... .......... .......... .......... .......... .......... 148 TAAAAATTAA ACTATGTAGT ATACATGAAA TTTGTGGGGG GGGGGGGGGA TACCAAATAT 71366 .......... .......... .......... .......... .......... .......... 148 ATATGAATTT TTTTTTTAAA AAAACGAGGA AAAGCTACTG CTAGGGAAAT TTGAACTCAC 71306 .......... .......... .......... .......... .......... .......... 148 AAGCGCTTAA ATGTTTGGCT CTTTCAAGAC AACTTAAACC ACTAGGCTGC ACCTTAAACC 71246 .......... .......... .......... .......... .......... .......... 148 ACTAGGCTAC ACCTTGTTGT GTTAAGGGTG TCCAAAATAA ATTAGTTAAC CATTTTGTAT 71186 .......... .......... .......... .......... .......... .......... 148 ATTATTTTAC TTGTATATAC TATGTAATTT ACCGACGAAG GGTGTCCAAT AGTATATAGC 71126 .......... .......... .......... .......... .......... .......... 148 TACGCCCCTG CCTAGTGATT ATGGTCTTGG TTGGCCCTTC ACCAATAAAC ACAACATTTG 71066 .......... .......... .......... .......... .......... .......... 148 CCTGTCTTTT CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA 71006 .......... .......... .......... .......... .......... .......... 148 GGAGTTGTAT AGTTCATGAG GACAGCGTTA AGTTCTCCTG AAATGGTCTT GTATTGTCCG 70946 .......... .......... .......... .......... .......... .......... 148 TCACCACTTG CAGAAACCAC AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG 70886 .......... .......... .......... .......... .......... .......... 148 CTACTGGCTT CAACAAACCA GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT 70826 .......... .......... .......... .......... .......... .......... 148 TTTGTGATCG TTTCACCGAA AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCTCTTT 70766 .......... .......... .......... .......... .......... .......... 148 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 .......... .......... .......... .......... .......... .......... 148 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 .......... .......... .......... .......... .......... .......... 148 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 .......... .......... .......... .......... .......... .......... 148 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 148 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 148 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 148 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 | .......... .......... .......... .......... .......... ......ATGG 152 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 | ||| | || || | TATCAGAGCT AAGG...... .......... .......... .......... .......... 166 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 166 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 166 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 166 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 166 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 166 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 166 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 166 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 166 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 166 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 166 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 166 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 166 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 166 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 166 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 166 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 166 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 166 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 166 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 166 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 166 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCACTGTG GCACCAGCGC ACCTCTTATG 69026 .......... .......... .......... .......... .......... .......... 166 CACATGTCTA AACCATCTTA GTCTCGCTTC CCACATCTTG TTCTTCACAT AGGTAACTCT 68966 .......... .......... .......... .......... .......... .......... 166 CCTCTTCTCC CAGATAACCT CATTCTTAAT CTTATCGCTT CTAGTATGCT CACACATTTA 68906 .......... .......... .......... .......... .......... .......... 166 TCTCAACATA TGCATCTACG AAACATGCAT CTTTTGTACA TATGAGTGCT TGACTGGCCA 68846 .......... .......... .......... .......... .......... .......... 166 ACACTCCAAC CTACATAACA AGAACACTCT AAACACCAAT TTGTAGAACT TACCTTTAAG 68786 .......... .......... .......... .......... .......... .......... 166 TCTAGGTGGT ACCTTCTTAT CATACTAAAC TCTAGAGGCA AGCCTCTATT TCATCCATGT 68726 .......... .......... .......... .......... .......... .......... 166 TGCTCTAGTG GGATGTGTGA CATCATCATT GATGTGCTCG TTACCCTGTA TTATGAGCCC 68666 .......... .......... .......... .......... .......... .......... 166 AAGATACTTA AAACTTTCTG TCTTAGAAAT AGTTTAAGTG GCAAGCCTTA CTTCCACGTT 68606 .......... .......... .......... .......... .......... .......... 166 CACTTCATAT GACACGCTAT TGAATTTGCA CTCCAAATAT TCTATTTTGT TCATGCTCAA 68546 .......... .......... .......... .......... .......... .......... 166 CATGGACCCT TCGAACTCTA TAGTCTCTTT CCAAATCTCC AACATAGCAT TAACTCAATT 68486 .......... .......... .......... .......... .......... .......... 166 TGGTGTCTAA TCAATCAGTA TTATGTCTTC TGCAAATAAT ATACACAGAG GAACCTCTTC 68426 .......... .......... .......... .......... .......... .......... 166 CTGAATAGAG CACATCAGTT CATCTATCAC CAAGACAAAT AGGAAAGCAC TAAGAATTGA 68366 .......... .......... .......... .......... .......... .......... 166 TCCCTTAATT GAAGTGTAGC CTCATCGTAA CTGGTAAGTG CTCTGAGTCT TTTCCGATTG 68306 .......... .......... .......... .......... .......... .......... 166 TTTTATGATG ACCCAGACCG TCGTTATTGG CACCTACACT ACAACTTGGT GGGAGAACCA 68246 .......... .......... .......... .......... .......... .......... 166 CTACTAGTTA TCAACTAAAG CAATAAACCT ACAAACTAAG GTATTAACGT TACGGAAGCA 68186 .......... .......... .......... .......... .......... .......... 166 AGTTAAATAA CTAAAGACAA TGTTCCATTT CTAAACAATG GTATAACAAC TAACTAATAA 68126 .......... .......... .......... .......... .......... .......... 166 TGTGGAAGAT AAACCTAGAA CCTGAAAGTC AATGTACTAA AATTAGAAAT AAGAACCAAA 68066 .......... .......... .......... .......... .......... .......... 166 TCTAACAATA ATTTCTTGTG AACTATCTAA CTAACTAAAA CAAGGTCTAC GTCCAAAAAT 68006 .......... .......... .......... .......... .......... .......... 166 GATGGACATA GACTAAAGAA AATTTTATGG CAATTCGAAC GATGTGTCTC ACCCTTGAAC 67946 .......... .......... .......... .......... .......... .......... 166 TCGAAGTGAT CATCGATCTC CTAAGAGAGG TCTATCAACA GTCGTGCAAG ATGCGCTGTA 67886 .......... .......... .......... .......... .......... .......... 166 CTCAACAAAA ATATGATCAA GTGCAGAATC GGTACACAAC CACGGTGTAG TGGTAAGTCA 67826 .......... .......... .......... .......... .......... .......... 166 CGTGGCTATC CCACTAGTGT AACATAAACA AGCAATTACA GGATTATAAA ACATGCATAA 67766 .......... .......... .......... .......... .......... .......... 166 ATATCAACAT ATTCAATACT ATCACAAGAA CAATATCACA GTTCACATGT TATATCATGT 67706 | |||||| || ||||| |||| || | | |||| ........AG ATTCAACACG ATCAC-AGAA -GAT-GGATA GTTCG..... .......... 200 AGTTGGTCCT CTCACGGAAC CCAAAATCAA ATTGTTAGCA TGCCGGAATG TGGCTATCAA 67646 .......... .......... .......... .......... .......... .......... 200 ATCCATTTTA TGGAAAACAT GAAAATCGAT CCCAATTAGC ATGTCGAAAT GTGAAAATCC 67586 .......... .......... .......... .......... .......... .......... 200 GATTCAAGTT AGAGTGTCGT AACGTGGCAG CTGATCCCAA TCACATATTA CAATAACACA 67526 .......... .......... .......... .......... .......... .......... 200 TCAAGATCAC ACGTTCAAGT CATAATTTCA TTGTGTCAAT ATTCATATTT CTCATTTCAA 67466 .......... .......... .......... .......... .......... .......... 200 CATCTATGAT CAATATTGTG TTATGTATAC ACATACAAGT ATCATAACGA AGCAAAGCAA 67406 .......... .......... .......... .......... .......... .......... 200 ATGTATATCA TACAATAATA GAATCAAAAC CATCACCAAC CTTAAAACAA GCTTGAAACC 67346 || ||||| || .......... .......... .......... .......... ........AA GCTTGGAA-T 211 CTAGACAGAT TGATCCATTC CTTTCCAGAT TC 67314 | ||| || | |||| |||| || ||| | || CGAGA-AGTT TGATGGATTC AATTTCAGTT TC 242 hqPGS_C01HBa0163B20.1-_SGN-E548332+ (72025 71957,70349 70332,67757 67721,67357 67314) ******************************************************************************** EST sequence 237 +strand 574 n (File: SGN-E286267+) 1 AATTTTTGAG TTGCCGCGAC GTTTCGCCCT ATTTTTACAG AGTAGGGATG TAAACAGTTA 61 CCACGAAATA TTGAGTTTTC TCTTTCTCTT GAAAGTTCTT GTGTTCTTTA TTCATCTAGT 121 GTGTGTGCGT GAATTCGATC CTAACAAATG GTATCAGAGC TAAGGAGATT CAACACGATC 181 ACAGAAGATG GATAGTTCGA AGCTTGGAAT CGAGAAGTTT GATGGATTCA ATTTCAGTTT 241 CTGGAAGATG CAGATCGAAG ATTATCTGTA CCAGAAAGAT TTTCACGAGC CGTTGACCGG 301 GGTGAAGACG AAATCCATGA CTGAGGAGAA GTGGAAACTC AAGGATCGCC AGGCTCTAGG 361 GTTGATCCGG TTCACTTTGT CAAGAAACAT GGCGTTCAAC ATCGTGAAGA AGAAGACTAC 421 GTCCGGTCTG TTGAAGGCAC TATCAAATAT GTATGAAAAA CCATCGGCTA TGAACAAAGT 481 ATATTTGATG CGTAGATTGT TCAATTTACA GATGTTTGAA ACTGGATACG TTTCTGATCA 541 TATAAACGAG TTCAATATGA TTTGGAGTCA ACTC Predicted gene structure (within gDNA segment 73405 to 66468): Exon 1 72025 71957 ( 69 n); cDNA 79 147 ( 69 n); score: 0.971 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.96), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 148 165 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 (s: 0), Pa: 0.000 (s: 0) Exon 3 67757 67721 ( 37 n); cDNA 166 199 ( 34 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.73) Exon 4 67357 67314 ( 44 n); cDNA 200 241 ( 42 n); score: 0.727 MATCH C01HBa0163B20.1- SGN-E286267+ 0.971 168 0.293 C PGS_C01HBa0163B20.1-_SGN-E286267+ (72025 71957,70349 70332,67757 67721,67357 67314) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT CATTCATCTA GTGTGTGTGC GTGAATTCGA 71966 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 138 TCCTAACAGT TTAGACTTTC CTTGAGAAGT GACCATGCAA GCTTGTGTAT CACCTGGTTT 71906 |||||||| TCCTAACAA. .......... .......... .......... .......... .......... 147 CCTCACAATC AATTGGCAGT TTTGGAAGCA TCACTAAAAA TGAAATCAAT GTTGCCTGTA 71846 .......... .......... .......... .......... .......... .......... 147 ATGATAGAGT CACGGAACAA TTATCTGTAC GAGTGAGCGT ATAGGATGTA TTGGAAACCA 71786 .......... .......... .......... .......... .......... .......... 147 TCGATTTTGT AGTTGTAGAC AATTGCTTTA TCATCATTAA TCCTCAATGC AACAACTTGT 71726 .......... .......... .......... .......... .......... .......... 147 TCTTTTACTG GTCCTGCTCT GTTTTCAATA CCGATGTCCC TGATAACGAA CCTTTCACCA 71666 .......... .......... .......... .......... .......... .......... 147 GAAACACCAA GGGAGGTTGT ATGCCATTTT ACTACACCGC CACCATTCTT ACTCCCTTGT 71606 .......... .......... .......... .......... .......... .......... 147 CACCCAGTGA CAGTGGCGGT AGCCATAAAT TTCACAAAGA GTGTCCAAAA ATTGTATAGG 71546 .......... .......... .......... .......... .......... .......... 147 GGTATATTTT TTCTTTTGGA TGAATGAGTG CACTAGAAAT TTTAAAAATT AAAGTACGTA 71486 .......... .......... .......... .......... .......... .......... 147 ATATACATGA AAATTTTTGG AAAGAAAAGA TGAAAAGATG AATGAGTGGA CTAGAAAATT 71426 .......... .......... .......... .......... .......... .......... 147 TAAAAATTAA ACTATGTAGT ATACATGAAA TTTGTGGGGG GGGGGGGGGA TACCAAATAT 71366 .......... .......... .......... .......... .......... .......... 147 ATATGAATTT TTTTTTTAAA AAAACGAGGA AAAGCTACTG CTAGGGAAAT TTGAACTCAC 71306 .......... .......... .......... .......... .......... .......... 147 AAGCGCTTAA ATGTTTGGCT CTTTCAAGAC AACTTAAACC ACTAGGCTGC ACCTTAAACC 71246 .......... .......... .......... .......... .......... .......... 147 ACTAGGCTAC ACCTTGTTGT GTTAAGGGTG TCCAAAATAA ATTAGTTAAC CATTTTGTAT 71186 .......... .......... .......... .......... .......... .......... 147 ATTATTTTAC TTGTATATAC TATGTAATTT ACCGACGAAG GGTGTCCAAT AGTATATAGC 71126 .......... .......... .......... .......... .......... .......... 147 TACGCCCCTG CCTAGTGATT ATGGTCTTGG TTGGCCCTTC ACCAATAAAC ACAACATTTG 71066 .......... .......... .......... .......... .......... .......... 147 CCTGTCTTTT CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA 71006 .......... .......... .......... .......... .......... .......... 147 GGAGTTGTAT AGTTCATGAG GACAGCGTTA AGTTCTCCTG AAATGGTCTT GTATTGTCCG 70946 .......... .......... .......... .......... .......... .......... 147 TCACCACTTG CAGAAACCAC AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG 70886 .......... .......... .......... .......... .......... .......... 147 CTACTGGCTT CAACAAACCA GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT 70826 .......... .......... .......... .......... .......... .......... 147 TTTGTGATCG TTTCACCGAA AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCTCTTT 70766 .......... .......... .......... .......... .......... .......... 147 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 .......... .......... .......... .......... .......... .......... 147 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 .......... .......... .......... .......... .......... .......... 147 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 .......... .......... .......... .......... .......... .......... 147 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 147 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 147 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 147 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 | .......... .......... .......... .......... .......... ......ATGG 151 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 | ||| | || || | TATCAGAGCT AAGG...... .......... .......... .......... .......... 165 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 165 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 165 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 165 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 165 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 165 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 165 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 165 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 165 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 165 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 165 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 165 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 165 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 165 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 165 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 165 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 165 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 165 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 165 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 165 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 165 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCACTGTG GCACCAGCGC ACCTCTTATG 69026 .......... .......... .......... .......... .......... .......... 165 CACATGTCTA AACCATCTTA GTCTCGCTTC CCACATCTTG TTCTTCACAT AGGTAACTCT 68966 .......... .......... .......... .......... .......... .......... 165 CCTCTTCTCC CAGATAACCT CATTCTTAAT CTTATCGCTT CTAGTATGCT CACACATTTA 68906 .......... .......... .......... .......... .......... .......... 165 TCTCAACATA TGCATCTACG AAACATGCAT CTTTTGTACA TATGAGTGCT TGACTGGCCA 68846 .......... .......... .......... .......... .......... .......... 165 ACACTCCAAC CTACATAACA AGAACACTCT AAACACCAAT TTGTAGAACT TACCTTTAAG 68786 .......... .......... .......... .......... .......... .......... 165 TCTAGGTGGT ACCTTCTTAT CATACTAAAC TCTAGAGGCA AGCCTCTATT TCATCCATGT 68726 .......... .......... .......... .......... .......... .......... 165 TGCTCTAGTG GGATGTGTGA CATCATCATT GATGTGCTCG TTACCCTGTA TTATGAGCCC 68666 .......... .......... .......... .......... .......... .......... 165 AAGATACTTA AAACTTTCTG TCTTAGAAAT AGTTTAAGTG GCAAGCCTTA CTTCCACGTT 68606 .......... .......... .......... .......... .......... .......... 165 CACTTCATAT GACACGCTAT TGAATTTGCA CTCCAAATAT TCTATTTTGT TCATGCTCAA 68546 .......... .......... .......... .......... .......... .......... 165 CATGGACCCT TCGAACTCTA TAGTCTCTTT CCAAATCTCC AACATAGCAT TAACTCAATT 68486 .......... .......... .......... .......... .......... .......... 165 TGGTGTCTAA TCAATCAGTA TTATGTCTTC TGCAAATAAT ATACACAGAG GAACCTCTTC 68426 .......... .......... .......... .......... .......... .......... 165 CTGAATAGAG CACATCAGTT CATCTATCAC CAAGACAAAT AGGAAAGCAC TAAGAATTGA 68366 .......... .......... .......... .......... .......... .......... 165 TCCCTTAATT GAAGTGTAGC CTCATCGTAA CTGGTAAGTG CTCTGAGTCT TTTCCGATTG 68306 .......... .......... .......... .......... .......... .......... 165 TTTTATGATG ACCCAGACCG TCGTTATTGG CACCTACACT ACAACTTGGT GGGAGAACCA 68246 .......... .......... .......... .......... .......... .......... 165 CTACTAGTTA TCAACTAAAG CAATAAACCT ACAAACTAAG GTATTAACGT TACGGAAGCA 68186 .......... .......... .......... .......... .......... .......... 165 AGTTAAATAA CTAAAGACAA TGTTCCATTT CTAAACAATG GTATAACAAC TAACTAATAA 68126 .......... .......... .......... .......... .......... .......... 165 TGTGGAAGAT AAACCTAGAA CCTGAAAGTC AATGTACTAA AATTAGAAAT AAGAACCAAA 68066 .......... .......... .......... .......... .......... .......... 165 TCTAACAATA ATTTCTTGTG AACTATCTAA CTAACTAAAA CAAGGTCTAC GTCCAAAAAT 68006 .......... .......... .......... .......... .......... .......... 165 GATGGACATA GACTAAAGAA AATTTTATGG CAATTCGAAC GATGTGTCTC ACCCTTGAAC 67946 .......... .......... .......... .......... .......... .......... 165 TCGAAGTGAT CATCGATCTC CTAAGAGAGG TCTATCAACA GTCGTGCAAG ATGCGCTGTA 67886 .......... .......... .......... .......... .......... .......... 165 CTCAACAAAA ATATGATCAA GTGCAGAATC GGTACACAAC CACGGTGTAG TGGTAAGTCA 67826 .......... .......... .......... .......... .......... .......... 165 CGTGGCTATC CCACTAGTGT AACATAAACA AGCAATTACA GGATTATAAA ACATGCATAA 67766 .......... .......... .......... .......... .......... .......... 165 ATATCAACAT ATTCAATACT ATCACAAGAA CAATATCACA GTTCACATGT TATATCATGT 67706 | |||||| || ||||| |||| || | | |||| ........AG ATTCAACACG ATCAC-AGAA -GAT-GGATA GTTCG..... .......... 199 AGTTGGTCCT CTCACGGAAC CCAAAATCAA ATTGTTAGCA TGCCGGAATG TGGCTATCAA 67646 .......... .......... .......... .......... .......... .......... 199 ATCCATTTTA TGGAAAACAT GAAAATCGAT CCCAATTAGC ATGTCGAAAT GTGAAAATCC 67586 .......... .......... .......... .......... .......... .......... 199 GATTCAAGTT AGAGTGTCGT AACGTGGCAG CTGATCCCAA TCACATATTA CAATAACACA 67526 .......... .......... .......... .......... .......... .......... 199 TCAAGATCAC ACGTTCAAGT CATAATTTCA TTGTGTCAAT ATTCATATTT CTCATTTCAA 67466 .......... .......... .......... .......... .......... .......... 199 CATCTATGAT CAATATTGTG TTATGTATAC ACATACAAGT ATCATAACGA AGCAAAGCAA 67406 .......... .......... .......... .......... .......... .......... 199 ATGTATATCA TACAATAATA GAATCAAAAC CATCACCAAC CTTAAAACAA GCTTGAAACC 67346 || ||||| || | .......... .......... .......... .......... ........AA GCTTGGAATC 211 CTAGACAGAT TGATCCATTC CTTTCCAGAT TC 67314 ||| || | |||| |||| || ||| | || -GAGA-AGTT TGATGGATTC AATTTCAGTT TC 241 hqPGS_C01HBa0163B20.1-_SGN-E286267+ (72025 71957,70349 70332,67757 67721,67357 67314) ******************************************************************************** EST sequence 172 -strand 790 n (File: SGN-E333848-) 1 TCAGGATAAC GAAAGGAGTT GGACTGCTCC TGGGGACAGC TTGAAGTGCT TCCTGAATGT 61 TCTTGTATTG TCCGCCTCCA CTGGTAGAAA CCACAGCATT AGGCTTGGAG GCAGAAATTT 121 GAAGGAGCTT ACGGTTACTA GCTTCGACAA ATGAGTCACT GTTTGATAAC AATTTGCGGG 181 TAAGGCCTGT GTTTTGTGTG ATCATTTCAC CAAAGTTGTT GACCATGGAA AGAGCATTGC 241 TACTCAGCTC CCGGGTGGTA CTCATTAGCT TCATCATTTC GTCACGGGTT GCACTGTATT 301 CTGATTTGGT GAAACCATCT AAACAAGTCT CTTCATAAGC AACGACAGCG CTAAGCCATG 361 ACTTGAGGTC ATCCACTATA TCCTTCATCT TTGAGAAATC AAAGTTCTCA ATCCTAGCGA 421 TAGAGCCCCT TAGTTCCTCA ACGGCTAGAT CAAACACCTC TTCACAAGCA AGGAGAGCGT 481 CTTTGGTGTA AGGATCACTG GCAGCTTTCT TAACTGGCTC AGTGTTCTTG ATGGCATTCT 541 TGATGTCTGC CACAGTGGCT TCGAATGCAA CCTTGATGTA GTCCTTTGGA TCGGACACAT 601 TCTTTGCTGC GGAGAGGGTC TTTTCACAAG TTTGTTTGTA TGGTGTGGGT TGACACATAG 661 ATTCAACTGA CTTTGTTGAA GTTGCAACTC CATTTGATGA TGTATCAGAA TCATGTTTAG 721 TCAGGGTGAC ACAGGCTGCC ACCACACAAG CCACCACAAG AACAGAAGCT ATTCCACCAA 781 TTACCACCTT Predicted gene structure (within gDNA segment 72394 to 67191): Exon 1 71019 70587 ( 433 n); cDNA 1 435 ( 435 n); score: 0.828 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 436 465 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E333848- 0.828 464 0.587 C PGS_C01HBa0163B20.1-_SGN-E333848- (71019 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): TCAGGATAAT GAAAGGAGTT GTATAGTTCA TGAGGACAGC GTTAAGTTCT CCTGAAATGG 70960 ||||||||| |||||||||| | | | || || ||||||| | |||| || | |||| TCAGGATAAC GAAAGGAGTT GGACTGCTCC TGGGGACAGC TTGAAGTGCT TCCTGAATGT 60 TCTTGTATTG TCCGTCACCA CTTGCAGAAA CCACAGCATT AGGCTTGGAG GGAGAAATTT 70900 |||||||||| |||| | ||| || | ||||| |||||||||| |||||||||| | |||||||| TCTTGTATTG TCCGCCTCCA CTGGTAGAAA CCACAGCATT AGGCTTGGAG GCAGAAATTT 120 GAAGGAGCTT ATGGCTACTG GCTTCAACAA ACCAGTCACT ATTTGATAAC AATTTGCGGG 70840 |||||||||| | || |||| ||||| |||| | ||||||| ||||||||| |||||||||| GAAGGAGCTT ACGGTTACTA GCTTCGACAA ATGAGTCACT GTTTGATAAC AATTTGCGGG 180 TAAGGCCAGT GGTTTTTGTG ATCGTTTCAC CGAAAACTGT TGGCCATGGA AAGAGCATTG 70780 ||||||| || | ||| |||| ||| |||||| | ||| ||| || ||||||| |||||||||| TAAGGCCTGT GTTTTGTGTG ATCATTTCAC C-AAAGTTGT TGACCATGGA AAGAGCATTG 239 ATACTCAGCT --C-TTTCGT ATTCAATATC TTCATCATTT TGTTGTGGGT TGCACTCTGT 70723 ||||||||| | | || | ||| || | |||||||||| || |||| |||||| | | CTACTCAGCT CCCGGGTGGT ACTCATTAGC TTCATCATTT CGTCACGGGT TGCACTGTAT 299 TCTGATTTGA TAAAACCATC TGAGCAAGTC TCTTCATAGG CAATCACAGT GCTAAGCCAT 70663 ||||||||| | |||||||| | | |||||| |||||||| | ||| |||| |||||||||| TCTGATTTGG TGAAACCATC TAAACAAGTC TCTTCATAAG CAACGACAGC GCTAAGCCAT 359 GTCTTGAGGT CTTCCACCAC ATCCTTGATC TTAGAGAAAT CAAAGTTCTC AATCTTAGCG 70603 | |||||||| | ||||| | |||||| ||| || ||||||| |||||||||| |||| ||||| GACTTGAGGT CATCCACTAT ATCCTTCATC TTTGAGAAAT CAAAGTTCTC AATCCTAGCG 419 ATAGAGCGTC TTTGGTGTAA GGATCACTGG CAGCTTTCTT AATCGGCTCG GTGTTTTTTG 70543 ||||||| | || | | ATAGAGCCCC TTAGTT.... .......... .......... .......... .......... 435 AGGTCATTCT TGATGTCTGA CACAGGCTGG CACCACAAGA ACAGAAGCTA TTCCACCGAT 70483 .......... .......... .......... .......... .......... .......... 435 TACCACCTTC TTTGCAATTT TATCAAATCA CATGTTAAGC CAATCATAGT TTTGAAAAAG 70423 .......... .......... .......... .......... .......... .......... 435 GCATGAAGTT TTGACCATTA GTTTTAAATG TGTGTGTTTT GGGAAAAAAT AATCATATGA 70363 .......... .......... .......... .......... .......... .......... 435 TAATTTGTTA CAGCCGTTTT CAAAACTAAA GGTCAAAAAC TTCATGCCTT CGAGAAAATT 70303 .......... .......... .......... .......... .......... .......... 435 TTATTTATTT TTGTAAAATA ATAGTTGAGT TGTCACTTGA TTTTTGGAAA ATTAAGAAAA 70243 .......... .......... .......... .......... .......... .......... 435 CCATTTAAAA AGATAATTTT GAAATTTTTT CAATGAACTT AATTTTAAGG GTTCAAGCGA 70183 .......... .......... .......... .......... .......... .......... 435 TCCTCTCAGA AAAGTTATAT GTGGTTGACC AACGAATTAA ATATGTCAAT AATGAAAATA 70123 .......... .......... .......... .......... .......... .......... 435 TTTAAGAATT ATTCGTGAAA AGAACTTATT TAAAAATGAA CAGAAATTAT TTGATACATA 70063 .......... .......... .......... .......... .......... .......... 435 AACATTCATA CTATTTCAAG AAATGAAATA ATTCTAATGT GGAAGTTTCA GAAATAATTC 70003 .......... .......... .......... .......... .......... .......... 435 TAGCTTAACA ATTTATTCGA ATCAAAATTT TCAAATAAGC GAGTAGCTCA AACGCTTAAA 69943 .......... .......... .......... .......... .......... .......... 435 TATGAATATG TATTATTTGA TAACTATGAA AGAATATGAA AAATATTTTA ACTTATCCTG 69883 .......... .......... .......... .......... .......... .......... 435 ACAAGCCTGG ATTTGCCCAA AAGACAAGTT AGTTCACTTA GCATTTGTGA AAAAGATACA 69823 .......... .......... .......... .......... .......... .......... 435 TTTTTTTATT TAAGTCAATT GCACAAACCT TGTATTGTTT GTAATCATGG AAGGATTTGA 69763 .......... .......... .......... .......... .......... .......... 435 CATTTATCCC TACCTTGTTA ATAGAACTTC AAAATATACA TGAGAGGTGG GCTACACCAC 69703 .......... .......... .......... .......... .......... .......... 435 GTCTCCCCGG TTACATGTCA AAAGATATTT CTAAGACTTC GGTTGAACAC TTCCTTAGAG 69643 .......... .......... .......... .......... .......... .......... 435 AGAACACTAT TAATTAAAGA CACTCTAATT AGTGAAATAA AGGTATCAAT TCAAACTCTT 69583 .......... .......... .......... .......... .......... .......... 435 AATTTCTCGT TGAGGATTCA ATAACAAATC CACTAAAATA TCATTAGGTA GTGTATGAGA 69523 .......... .......... .......... .......... .......... .......... 435 AGGGTACAGT GTATGCAGAA CATATTACTA TCTCAACGAG ATAGAGAGAC TTCTTCTGAA 69463 .......... .......... .......... .......... .......... .......... 435 AGACTCTCGA TTCAAGTTTA TCAAAACCAA GTAATTATAT AAGAAAATAA CAATGAAAAA 69403 .......... .......... .......... .......... .......... .......... 435 AGCATAGTCA TTAATTAATA AGAAAAACAG TGCAAAGTCT ACACGAAAAA AACACTAACA 69343 .......... .......... .......... .......... .......... .......... 435 AGAGTAAAAT ATTGTAATCA AACACATTAA CAACATATGG CAGGAACTAC AAGGGTACAA 69283 .......... .......... .......... .......... .......... .......... 435 CAATTACTAT GACAGACAAA CAAACAAGCC TAAACCTTCG CAAGGCAACA CACCCTCCAT 69223 .......... .......... .......... .......... .......... .......... 435 CCCTTCTATC CCTCTACCTT AATCAAGGAT CTATACTCCT TCCTATCTAG AGTCGTGACC 69163 .......... .......... .......... .......... .......... .......... 435 TCGATAACAT GAAGTTGTGT CATATATTGT ATAATCACCT TTTTCTCAAT ACTTCTTTGG 69103 .......... .......... .......... .......... .......... .......... 435 CCTACATATA TCCTTTGTGA ATCCCCAACA ACTAGATTCT CACTCCTCCT CAC 69050 || |||| ||||| || || |||| | ||| .......... .......... ..CCTCAACG GCTAGA-TCA AACACCTCTT CAC 465 hqPGS_C01HBa0163B20.1-_SGN-E333848- (71019 70587,69080 69050) ******************************************************************************** EST sequence 175 -strand 792 n (File: SGN-E333892-) 1 ATCAGGGATA ACGAAAGGAG TTGGACTGCT CCTGGGGACA GCTGNAAGTG CTTCCTGAAT 61 GGTCTTGTAT TGTCCGCCTC CACTGGTAGA AACCACAGCA TTAGGCTTGG AGGCAGAAAT 121 TTGAAGGAGC TTACGGTTAC TAGCTTCGAC AAATGAGTCA CTGTTTGATA ACAATTTGCG 181 GGTAAGGCCT GTGTTTTGTG TGATCATTTC ACCAAAGTTG TTGACCATGG AAAGAGCATT 241 GCTACTCAGC TCCCGGGTGG TACTCATTAG CTTCATCATT TCGTCACGGG TTGCACTGTA 301 TTCTGATTTG GTGAAACCAT CTAAACAAGT CTCTTCATAA GCAACGACAG CGCTAAGCCA 361 TGACTTGAGG TCATCCACTA TATCCTTCAT CTTTGAGAAA TCAAAGTTCT CAATCCTAGC 421 GATAGAGCCC CTTAGTTCCT CAACGGCTAG ATCAAACACC TCTTCACAAG CAAGGAGAGC 481 GTCTTTGGTG TAAGGATCAC TGGCAGCTTT CTTAACTGGC TCAGTGTTCT TGATGGCATT 541 CTTGATGTCT GCCACAGTGG CTTCGAATGC AACCTTGATG TAGTCCTTTG GATCGGACAC 601 ATTCTTTGCT GCGGAGAGGG TCTTTTCACA AGTTTGTTTG TATGGTGTGG GTTGACACAT 661 AGATTCAACT GACTTTGTTG AAGTTGCAAC TCCATTTGAT GATGTATCAG AATCATGTTT 721 AGTCAGGGTG ACACAGGCTG CCACCACACA AGCCACCACA AGAACAGAAG CTATTCCACC 781 AATTACCACC TT Predicted gene structure (within gDNA segment 72144 to 67191): Exon 1 71550 71545 ( 6 n); cDNA 1 6 ( 6 n); score: 0.667 Intron 1 71544 71016 ( 529 n); Pd: 0.468 (s: 0), Pa: 0.965 (s: 0.72) Exon 2 71015 70587 ( 429 n); cDNA 7 437 ( 431 n); score: 0.826 Intron 2 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 3 69080 69050 ( 31 n); cDNA 438 467 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E333892- 0.826 466 0.588 C PGS_C01HBa0163B20.1-_SGN-E333892- (71550 71545,71015 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): ATAGGGGTAT ATTTTTTCTT TTGGATGAAT GAGTGCACTA GAAATTTTAA AAATTAAAGT 71491 || || ATCAGG.... .......... .......... .......... .......... .......... 6 ACGTAATATA CATGAAAATT TTTGGAAAGA AAAGATGAAA AGATGAATGA GTGGACTAGA 71431 .......... .......... .......... .......... .......... .......... 6 AAATTTAAAA ATTAAACTAT GTAGTATACA TGAAATTTGT GGGGGGGGGG GGGGATACCA 71371 .......... .......... .......... .......... .......... .......... 6 AATATATATG AATTTTTTTT TTAAAAAAAC GAGGAAAAGC TACTGCTAGG GAAATTTGAA 71311 .......... .......... .......... .......... .......... .......... 6 CTCACAAGCG CTTAAATGTT TGGCTCTTTC AAGACAACTT AAACCACTAG GCTGCACCTT 71251 .......... .......... .......... .......... .......... .......... 6 AAACCACTAG GCTACACCTT GTTGTGTTAA GGGTGTCCAA AATAAATTAG TTAACCATTT 71191 .......... .......... .......... .......... .......... .......... 6 TGTATATTAT TTTACTTGTA TATACTATGT AATTTACCGA CGAAGGGTGT CCAATAGTAT 71131 .......... .......... .......... .......... .......... .......... 6 ATAGCTACGC CCCTGCCTAG TGATTATGGT CTTGGTTGGC CCTTCACCAA TAAACACAAC 71071 .......... .......... .......... .......... .......... .......... 6 ATTTGCCTGT CTTTTCAATT TCAATGTGTT CCTTGTATGT ACCGGCCTTG ATCAGGATAA 71011 ||||| .......... .......... .......... .......... .......... .....GATAA 11 TGAAAGGAGT TGTATAGTTC ATGAGGACAG CGTTAAGTTC TCCTGAAATG GTCTTGTATT 70951 ||||||||| || | | || || |||||| | |||| | | | |||| |||||||||| CGAAAGGAGT TGGACTGCTC CTGGGGACAG CTGNAAGTGC TTCCTGAATG GTCTTGTATT 71 GTCCGTCACC ACTTGCAGAA ACCACAGCAT TAGGCTTGGA GGGAGAAATT TGAAGGAGCT 70891 ||||| | || ||| | |||| |||||||||| |||||||||| || ||||||| |||||||||| GTCCGCCTCC ACTGGTAGAA ACCACAGCAT TAGGCTTGGA GGCAGAAATT TGAAGGAGCT 131 TATGGCTACT GGCTTCAACA AACCAGTCAC TATTTGATAA CAATTTGCGG GTAAGGCCAG 70831 || || |||| ||||| ||| || |||||| | |||||||| |||||||||| |||||||| | TACGGTTACT AGCTTCGACA AATGAGTCAC TGTTTGATAA CAATTTGCGG GTAAGGCCTG 191 TGGTTTTTGT GATCGTTTCA CCGAAAACTG TTGGCCATGG AAAGAGCATT GATACTCAGC 70771 || ||| ||| |||| ||||| || ||| || ||| |||||| |||||||||| | |||||||| TGTTTTGTGT GATCATTTCA CC-AAAGTTG TTGACCATGG AAAGAGCATT GCTACTCAGC 250 T--C-TTTCG TATTCAATAT CTTCATCATT TTGTTGTGGG TTGCACTCTG TTCTGATTTG 70714 | | | | || ||| || |||||||||| | || ||| ||||||| | |||||||||| TCCCGGGTGG TACTCATTAG CTTCATCATT TCGTCACGGG TTGCACTGTA TTCTGATTTG 310 ATAAAACCAT CTGAGCAAGT CTCTTCATAG GCAATCACAG TGCTAAGCCA TGTCTTGAGG 70654 | ||||||| || | ||||| ||||||||| |||| |||| ||||||||| || ||||||| GTGAAACCAT CTAAACAAGT CTCTTCATAA GCAACGACAG CGCTAAGCCA TGACTTGAGG 370 TCTTCCACCA CATCCTTGAT CTTAGAGAAA TCAAAGTTCT CAATCTTAGC GATAGAGCGT 70594 || ||||| | |||||| || ||| |||||| |||||||||| ||||| |||| |||||||| TCATCCACTA TATCCTTCAT CTTTGAGAAA TCAAAGTTCT CAATCCTAGC GATAGAGCCC 430 CTTTGGTGTA AGGATCACTG GCAGCTTTCT TAATCGGCTC GGTGTTTTTT GAGGTCATTC 70534 ||| | | CTTAGTT... .......... .......... .......... .......... .......... 437 TTGATGTCTG ACACAGGCTG GCACCACAAG AACAGAAGCT ATTCCACCGA TTACCACCTT 70474 .......... .......... .......... .......... .......... .......... 437 CTTTGCAATT TTATCAAATC ACATGTTAAG CCAATCATAG TTTTGAAAAA GGCATGAAGT 70414 .......... .......... .......... .......... .......... .......... 437 TTTGACCATT AGTTTTAAAT GTGTGTGTTT TGGGAAAAAA TAATCATATG ATAATTTGTT 70354 .......... .......... .......... .......... .......... .......... 437 ACAGCCGTTT TCAAAACTAA AGGTCAAAAA CTTCATGCCT TCGAGAAAAT TTTATTTATT 70294 .......... .......... .......... .......... .......... .......... 437 TTTGTAAAAT AATAGTTGAG TTGTCACTTG ATTTTTGGAA AATTAAGAAA ACCATTTAAA 70234 .......... .......... .......... .......... .......... .......... 437 AAGATAATTT TGAAATTTTT TCAATGAACT TAATTTTAAG GGTTCAAGCG ATCCTCTCAG 70174 .......... .......... .......... .......... .......... .......... 437 AAAAGTTATA TGTGGTTGAC CAACGAATTA AATATGTCAA TAATGAAAAT ATTTAAGAAT 70114 .......... .......... .......... .......... .......... .......... 437 TATTCGTGAA AAGAACTTAT TTAAAAATGA ACAGAAATTA TTTGATACAT AAACATTCAT 70054 .......... .......... .......... .......... .......... .......... 437 ACTATTTCAA GAAATGAAAT AATTCTAATG TGGAAGTTTC AGAAATAATT CTAGCTTAAC 69994 .......... .......... .......... .......... .......... .......... 437 AATTTATTCG AATCAAAATT TTCAAATAAG CGAGTAGCTC AAACGCTTAA ATATGAATAT 69934 .......... .......... .......... .......... .......... .......... 437 GTATTATTTG ATAACTATGA AAGAATATGA AAAATATTTT AACTTATCCT GACAAGCCTG 69874 .......... .......... .......... .......... .......... .......... 437 GATTTGCCCA AAAGACAAGT TAGTTCACTT AGCATTTGTG AAAAAGATAC ATTTTTTTAT 69814 .......... .......... .......... .......... .......... .......... 437 TTAAGTCAAT TGCACAAACC TTGTATTGTT TGTAATCATG GAAGGATTTG ACATTTATCC 69754 .......... .......... .......... .......... .......... .......... 437 CTACCTTGTT AATAGAACTT CAAAATATAC ATGAGAGGTG GGCTACACCA CGTCTCCCCG 69694 .......... .......... .......... .......... .......... .......... 437 GTTACATGTC AAAAGATATT TCTAAGACTT CGGTTGAACA CTTCCTTAGA GAGAACACTA 69634 .......... .......... .......... .......... .......... .......... 437 TTAATTAAAG ACACTCTAAT TAGTGAAATA AAGGTATCAA TTCAAACTCT TAATTTCTCG 69574 .......... .......... .......... .......... .......... .......... 437 TTGAGGATTC AATAACAAAT CCACTAAAAT ATCATTAGGT AGTGTATGAG AAGGGTACAG 69514 .......... .......... .......... .......... .......... .......... 437 TGTATGCAGA ACATATTACT ATCTCAACGA GATAGAGAGA CTTCTTCTGA AAGACTCTCG 69454 .......... .......... .......... .......... .......... .......... 437 ATTCAAGTTT ATCAAAACCA AGTAATTATA TAAGAAAATA ACAATGAAAA AAGCATAGTC 69394 .......... .......... .......... .......... .......... .......... 437 ATTAATTAAT AAGAAAAACA GTGCAAAGTC TACACGAAAA AAACACTAAC AAGAGTAAAA 69334 .......... .......... .......... .......... .......... .......... 437 TATTGTAATC AAACACATTA ACAACATATG GCAGGAACTA CAAGGGTACA ACAATTACTA 69274 .......... .......... .......... .......... .......... .......... 437 TGACAGACAA ACAAACAAGC CTAAACCTTC GCAAGGCAAC ACACCCTCCA TCCCTTCTAT 69214 .......... .......... .......... .......... .......... .......... 437 CCCTCTACCT TAATCAAGGA TCTATACTCC TTCCTATCTA GAGTCGTGAC CTCGATAACA 69154 .......... .......... .......... .......... .......... .......... 437 TGAAGTTGTG TCATATATTG TATAATCACC TTTTTCTCAA TACTTCTTTG GCCTACATAT 69094 .......... .......... .......... .......... .......... .......... 437 ATCCTTTGTG AATCCCCAAC AACTAGATTC TCACTCCTCC TCAC 69050 || |||| ||||| || || |||| |||| .......... ...CCTCAAC GGCTAGA-TC AAACACCTCT TCAC 467 hqPGS_C01HBa0163B20.1-_SGN-E333892- (71015 70587,69080 69050) ******************************************************************************** EST sequence 102 -strand 711 n (File: SGN-E332713-) 1 GGTAGAAACC ACAGCATTAG CTTGGAGGCA GAAATTTGAA GGAGCTTACG GTTACTAGCT 61 TCGACAAATG AGTCACTGTT TGATAACAAT TTGCGGGTAA GGCCTGTGTT TTGTGTGATC 121 ATTTCACCAA AGTTGTTGAC CATGGAAAGA GCATTGCTAC TCAGCTCCCG GGTGGTACTC 181 ATTAGCTTCA TCATTTCGTC ACGGGTTGCA CTGTATTCTG ATTTGGTGAA ACCATCTAAA 241 CAAGTCTCTT CATAAGCAAC GACAGCGCTA AGCCATGACT TGAGGTCATC CACTATATCC 301 TTCATCTTTG AGAAATCAAA GTTCTCAATC CTAGCGATAG AGCCCCTTAG TTCCTCAACG 361 GCTAGATCAA ACACCTCTTC ACAAGCAAGG AGAGCGTCTT TGGTGTAAGG ATCACTGGCA 421 GCTTTCTTAA CTGGCTCAGT GTTCTTGATG GCATTCTTGA TGTCTGCCAC AGTGGCTTCG 481 AATGCAACCT TGATGTAGTC CTTTGGATCG GACACATTCT TTGCTGCGGA GAGGGTCTTT 541 TCACAAGTTT GTTTGTATGG TGTGGGTTGA CACATAGATT CAACTGACTT TGTTGAAGTT 601 GCAACTCCAT TTGATGATGT ATCAGAATCA TGTTTAGTCA GGGTGACACA GGCTGCCACC 661 ACACAAGCCA CCACAAGAAC AGAAGCTATT CCACCAATTA CCACCTTCTT T Predicted gene structure (within gDNA segment 71574 to 67151): Exon 1 70934 70587 ( 348 n); cDNA 4 352 ( 349 n); score: 0.838 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 353 382 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E332713- 0.838 379 0.533 C PGS_C01HBa0163B20.1-_SGN-E332713- (70934 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): AGAAACCACA GCATTAGGCT TGGAGGGAGA AATTTGAAGG AGCTTATGGC TACTGGCTTC 70875 |||||||||| |||||| ||| |||||| ||| |||||||||| |||||| || |||| ||||| AGAAACCACA GCATTA-GCT TGGAGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC 62 AACAAACCAG TCACTATTTG ATAACAATTT GCGGGTAAGG CCAGTGGTTT TTGTGATCGT 70815 ||||| || ||||| |||| |||||||||| |||||||||| || ||| ||| ||||||| | GACAAATGAG TCACTGTTTG ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT 122 TTCACCGAAA ACTGTTGGCC ATGGAAAGAG CATTGATACT CAGCT--C-T TTCGTATTCA 70758 |||||| ||| ||||| || |||||||||| ||||| |||| ||||| | | ||| ||| TTCACC-AAA GTTGTTGACC ATGGAAAGAG CATTGCTACT CAGCTCCCGG GTGGTACTCA 181 ATATCTTCAT CATTTTGTTG TGGGTTGCAC TCTGTTCTGA TTTGATAAAA CCATCTGAGC 70698 || |||||| ||||| || ||||||||| | | |||||| |||| | ||| |||||| | | TTAGCTTCAT CATTTCGTCA CGGGTTGCAC TGTATTCTGA TTTGGTGAAA CCATCTAAAC 241 AAGTCTCTTC ATAGGCAATC ACAGTGCTAA GCCATGTCTT GAGGTCTTCC ACCACATCCT 70638 |||||||||| ||| |||| |||| ||||| |||||| ||| |||||| ||| || | ||||| AAGTCTCTTC ATAAGCAACG ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCCT 301 TGATCTTAGA GAAATCAAAG TTCTCAATCT TAGCGATAGA GCGTCTTTGG TGTAAGGATC 70578 | ||||| || |||||||||| ||||||||| |||||||||| || ||| | | TCATCTTTGA GAAATCAAAG TTCTCAATCC TAGCGATAGA GCCCCTTAGT T......... 352 ACTGGCAGCT TTCTTAATCG GCTCGGTGTT TTTTGAGGTC ATTCTTGATG TCTGACACAG 70518 .......... .......... .......... .......... .......... .......... 352 GCTGGCACCA CAAGAACAGA AGCTATTCCA CCGATTACCA CCTTCTTTGC AATTTTATCA 70458 .......... .......... .......... .......... .......... .......... 352 AATCACATGT TAAGCCAATC ATAGTTTTGA AAAAGGCATG AAGTTTTGAC CATTAGTTTT 70398 .......... .......... .......... .......... .......... .......... 352 AAATGTGTGT GTTTTGGGAA AAAATAATCA TATGATAATT TGTTACAGCC GTTTTCAAAA 70338 .......... .......... .......... .......... .......... .......... 352 CTAAAGGTCA AAAACTTCAT GCCTTCGAGA AAATTTTATT TATTTTTGTA AAATAATAGT 70278 .......... .......... .......... .......... .......... .......... 352 TGAGTTGTCA CTTGATTTTT GGAAAATTAA GAAAACCATT TAAAAAGATA ATTTTGAAAT 70218 .......... .......... .......... .......... .......... .......... 352 TTTTTCAATG AACTTAATTT TAAGGGTTCA AGCGATCCTC TCAGAAAAGT TATATGTGGT 70158 .......... .......... .......... .......... .......... .......... 352 TGACCAACGA ATTAAATATG TCAATAATGA AAATATTTAA GAATTATTCG TGAAAAGAAC 70098 .......... .......... .......... .......... .......... .......... 352 TTATTTAAAA ATGAACAGAA ATTATTTGAT ACATAAACAT TCATACTATT TCAAGAAATG 70038 .......... .......... .......... .......... .......... .......... 352 AAATAATTCT AATGTGGAAG TTTCAGAAAT AATTCTAGCT TAACAATTTA TTCGAATCAA 69978 .......... .......... .......... .......... .......... .......... 352 AATTTTCAAA TAAGCGAGTA GCTCAAACGC TTAAATATGA ATATGTATTA TTTGATAACT 69918 .......... .......... .......... .......... .......... .......... 352 ATGAAAGAAT ATGAAAAATA TTTTAACTTA TCCTGACAAG CCTGGATTTG CCCAAAAGAC 69858 .......... .......... .......... .......... .......... .......... 352 AAGTTAGTTC ACTTAGCATT TGTGAAAAAG ATACATTTTT TTATTTAAGT CAATTGCACA 69798 .......... .......... .......... .......... .......... .......... 352 AACCTTGTAT TGTTTGTAAT CATGGAAGGA TTTGACATTT ATCCCTACCT TGTTAATAGA 69738 .......... .......... .......... .......... .......... .......... 352 ACTTCAAAAT ATACATGAGA GGTGGGCTAC ACCACGTCTC CCCGGTTACA TGTCAAAAGA 69678 .......... .......... .......... .......... .......... .......... 352 TATTTCTAAG ACTTCGGTTG AACACTTCCT TAGAGAGAAC ACTATTAATT AAAGACACTC 69618 .......... .......... .......... .......... .......... .......... 352 TAATTAGTGA AATAAAGGTA TCAATTCAAA CTCTTAATTT CTCGTTGAGG ATTCAATAAC 69558 .......... .......... .......... .......... .......... .......... 352 AAATCCACTA AAATATCATT AGGTAGTGTA TGAGAAGGGT ACAGTGTATG CAGAACATAT 69498 .......... .......... .......... .......... .......... .......... 352 TACTATCTCA ACGAGATAGA GAGACTTCTT CTGAAAGACT CTCGATTCAA GTTTATCAAA 69438 .......... .......... .......... .......... .......... .......... 352 ACCAAGTAAT TATATAAGAA AATAACAATG AAAAAAGCAT AGTCATTAAT TAATAAGAAA 69378 .......... .......... .......... .......... .......... .......... 352 AACAGTGCAA AGTCTACACG AAAAAAACAC TAACAAGAGT AAAATATTGT AATCAAACAC 69318 .......... .......... .......... .......... .......... .......... 352 ATTAACAACA TATGGCAGGA ACTACAAGGG TACAACAATT ACTATGACAG ACAAACAAAC 69258 .......... .......... .......... .......... .......... .......... 352 AAGCCTAAAC CTTCGCAAGG CAACACACCC TCCATCCCTT CTATCCCTCT ACCTTAATCA 69198 .......... .......... .......... .......... .......... .......... 352 AGGATCTATA CTCCTTCCTA TCTAGAGTCG TGACCTCGAT AACATGAAGT TGTGTCATAT 69138 .......... .......... .......... .......... .......... .......... 352 ATTGTATAAT CACCTTTTTC TCAATACTTC TTTGGCCTAC ATATATCCTT TGTGAATCCC 69078 || .......... .......... .......... .......... .......... .......CCT 355 CAACAACTAG ATTCTCACTC CTCCTCAC 69050 |||| |||| | || || | ||| |||| CAACGGCTAG A-TCAAACAC CTCTTCAC 382 hqPGS_C01HBa0163B20.1-_SGN-E332713- (70934 70587,69080 69050) ******************************************************************************** EST sequence 107 -strand 712 n (File: SGN-E332866-) 1 GGTAGAAACC ACAGCATTAG GCTTGGAGGC AGAAATTTGA AGGAGCTTAC GGTTACTAGC 61 TTCGACAAAT GAGTCACTGT TGNATAACAA TTTGCGGGTA AGGCCTGTGT TTTGTGTGAT 121 CATTTCACCA AAGTTGTTGA CCATGGAAAG AGCATTGCTA CTCAGCTCCC GGGTGGTACT 181 CATTAGCTTC ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA 241 ACAAGTCTCT TCATAAGCAA CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC 301 CTTCATCTTT GAGAAATCAA AGTTCTCAAT CCTAGCGATA GAGCCCCTTA GTTCCTCAAC 361 GGCTAGATCA AACACCTCTT CACAAGCAAG GAGAGCGTCT TTGGTGTAAG GATCACTGGC 421 AGCTTTCTTA ACTGGCTCAG TGTTCTTGAT GGCATTCTTG ATGTCTGCCA CAGTGGCTTC 481 GAATGCAACC TTGATGTAGT CCTTTGGATC GGACACATTC TTTGCTGCGG AGAGGGTCTT 541 TTCACAAGTT TGTTTGTATG GTGTGGGTTG ACACATAGAT TCAACTGACT TTGTTGAAGT 601 TGCAACTCCA TTTGATGATG TATCAGAATC ATGTTTAGTC AGGGTGACAC AGGCTGCCAC 661 CACACAAGCC ACCACAAGAA CAGAAGCTAT TCCACCAATT ACCACCTTCT TT Predicted gene structure (within gDNA segment 71574 to 67151): Exon 1 70934 70587 ( 348 n); cDNA 4 353 ( 350 n); score: 0.835 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 354 383 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E332866- 0.835 379 0.532 C PGS_C01HBa0163B20.1-_SGN-E332866- (70934 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): AGAAACCACA GCATTAGGCT TGGAGGGAGA AATTTGAAGG AGCTTATGGC TACTGGCTTC 70875 |||||||||| |||||||||| |||||| ||| |||||||||| |||||| || |||| ||||| AGAAACCACA GCATTAGGCT TGGAGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC 63 AACAAACCAG TCACTATTTG ATAACAATTT GCGGGTAAGG CCAGTGGTTT TTGTGATCGT 70815 ||||| || ||||| || |||||||||| |||||||||| || ||| ||| ||||||| | GACAAATGAG TCACTGTTGN ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT 123 TTCACCGAAA ACTGTTGGCC ATGGAAAGAG CATTGATACT CAGCT--C-T TTCGTATTCA 70758 |||||| ||| ||||| || |||||||||| ||||| |||| ||||| | | ||| ||| TTCACC-AAA GTTGTTGACC ATGGAAAGAG CATTGCTACT CAGCTCCCGG GTGGTACTCA 182 ATATCTTCAT CATTTTGTTG TGGGTTGCAC TCTGTTCTGA TTTGATAAAA CCATCTGAGC 70698 || |||||| ||||| || ||||||||| | | |||||| |||| | ||| |||||| | | TTAGCTTCAT CATTTCGTCA CGGGTTGCAC TGTATTCTGA TTTGGTGAAA CCATCTAAAC 242 AAGTCTCTTC ATAGGCAATC ACAGTGCTAA GCCATGTCTT GAGGTCTTCC ACCACATCCT 70638 |||||||||| ||| |||| |||| ||||| |||||| ||| |||||| ||| || | ||||| AAGTCTCTTC ATAAGCAACG ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCCT 302 TGATCTTAGA GAAATCAAAG TTCTCAATCT TAGCGATAGA GCGTCTTTGG TGTAAGGATC 70578 | ||||| || |||||||||| ||||||||| |||||||||| || ||| | | TCATCTTTGA GAAATCAAAG TTCTCAATCC TAGCGATAGA GCCCCTTAGT T......... 353 ACTGGCAGCT TTCTTAATCG GCTCGGTGTT TTTTGAGGTC ATTCTTGATG TCTGACACAG 70518 .......... .......... .......... .......... .......... .......... 353 GCTGGCACCA CAAGAACAGA AGCTATTCCA CCGATTACCA CCTTCTTTGC AATTTTATCA 70458 .......... .......... .......... .......... .......... .......... 353 AATCACATGT TAAGCCAATC ATAGTTTTGA AAAAGGCATG AAGTTTTGAC CATTAGTTTT 70398 .......... .......... .......... .......... .......... .......... 353 AAATGTGTGT GTTTTGGGAA AAAATAATCA TATGATAATT TGTTACAGCC GTTTTCAAAA 70338 .......... .......... .......... .......... .......... .......... 353 CTAAAGGTCA AAAACTTCAT GCCTTCGAGA AAATTTTATT TATTTTTGTA AAATAATAGT 70278 .......... .......... .......... .......... .......... .......... 353 TGAGTTGTCA CTTGATTTTT GGAAAATTAA GAAAACCATT TAAAAAGATA ATTTTGAAAT 70218 .......... .......... .......... .......... .......... .......... 353 TTTTTCAATG AACTTAATTT TAAGGGTTCA AGCGATCCTC TCAGAAAAGT TATATGTGGT 70158 .......... .......... .......... .......... .......... .......... 353 TGACCAACGA ATTAAATATG TCAATAATGA AAATATTTAA GAATTATTCG TGAAAAGAAC 70098 .......... .......... .......... .......... .......... .......... 353 TTATTTAAAA ATGAACAGAA ATTATTTGAT ACATAAACAT TCATACTATT TCAAGAAATG 70038 .......... .......... .......... .......... .......... .......... 353 AAATAATTCT AATGTGGAAG TTTCAGAAAT AATTCTAGCT TAACAATTTA TTCGAATCAA 69978 .......... .......... .......... .......... .......... .......... 353 AATTTTCAAA TAAGCGAGTA GCTCAAACGC TTAAATATGA ATATGTATTA TTTGATAACT 69918 .......... .......... .......... .......... .......... .......... 353 ATGAAAGAAT ATGAAAAATA TTTTAACTTA TCCTGACAAG CCTGGATTTG CCCAAAAGAC 69858 .......... .......... .......... .......... .......... .......... 353 AAGTTAGTTC ACTTAGCATT TGTGAAAAAG ATACATTTTT TTATTTAAGT CAATTGCACA 69798 .......... .......... .......... .......... .......... .......... 353 AACCTTGTAT TGTTTGTAAT CATGGAAGGA TTTGACATTT ATCCCTACCT TGTTAATAGA 69738 .......... .......... .......... .......... .......... .......... 353 ACTTCAAAAT ATACATGAGA GGTGGGCTAC ACCACGTCTC CCCGGTTACA TGTCAAAAGA 69678 .......... .......... .......... .......... .......... .......... 353 TATTTCTAAG ACTTCGGTTG AACACTTCCT TAGAGAGAAC ACTATTAATT AAAGACACTC 69618 .......... .......... .......... .......... .......... .......... 353 TAATTAGTGA AATAAAGGTA TCAATTCAAA CTCTTAATTT CTCGTTGAGG ATTCAATAAC 69558 .......... .......... .......... .......... .......... .......... 353 AAATCCACTA AAATATCATT AGGTAGTGTA TGAGAAGGGT ACAGTGTATG CAGAACATAT 69498 .......... .......... .......... .......... .......... .......... 353 TACTATCTCA ACGAGATAGA GAGACTTCTT CTGAAAGACT CTCGATTCAA GTTTATCAAA 69438 .......... .......... .......... .......... .......... .......... 353 ACCAAGTAAT TATATAAGAA AATAACAATG AAAAAAGCAT AGTCATTAAT TAATAAGAAA 69378 .......... .......... .......... .......... .......... .......... 353 AACAGTGCAA AGTCTACACG AAAAAAACAC TAACAAGAGT AAAATATTGT AATCAAACAC 69318 .......... .......... .......... .......... .......... .......... 353 ATTAACAACA TATGGCAGGA ACTACAAGGG TACAACAATT ACTATGACAG ACAAACAAAC 69258 .......... .......... .......... .......... .......... .......... 353 AAGCCTAAAC CTTCGCAAGG CAACACACCC TCCATCCCTT CTATCCCTCT ACCTTAATCA 69198 .......... .......... .......... .......... .......... .......... 353 AGGATCTATA CTCCTTCCTA TCTAGAGTCG TGACCTCGAT AACATGAAGT TGTGTCATAT 69138 .......... .......... .......... .......... .......... .......... 353 ATTGTATAAT CACCTTTTTC TCAATACTTC TTTGGCCTAC ATATATCCTT TGTGAATCCC 69078 || .......... .......... .......... .......... .......... .......CCT 356 CAACAACTAG ATTCTCACTC CTCCTCAC 69050 |||| |||| | || || | ||| |||| CAACGGCTAG A-TCAAACAC CTCTTCAC 383 hqPGS_C01HBa0163B20.1-_SGN-E332866- (70934 70587,69080 69050) ******************************************************************************** EST sequence 126 -strand 708 n (File: SGN-E333232-) 1 GGTAGAAACC ACAGCATTAG GCTTGANGGC AGAAATTTGA AGGAGCTTAC GGTTACTAGC 61 TTCGACAAAT GAGTCACTGT TTGATAACAA TTTGCGGGTA AGGCCTGTGT TTTGTGTGAT 121 CATTTCACCA AAGTTGTTGA CCATGGAAAG AGCATTGCTA CTCAGCTCCC GGGTGGTACT 181 CATTAGCTTC ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA 241 ACAAGTCTCT TCATAAGCAA CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC 301 CTTCATCTTT GAGAAATCAA AGTTCTCAAT CCTAGCGATA GAGCCCCTTA GTTCCTCAAC 361 GGCTAGATCA AACACCTCTT CACAAGCAAG GAGAGCGTCT TTGGTGTAAG GATCACTGGC 421 AGCTTTCTTA ACTGGCTCAG TGTTCTTGAT GGCATTCTTG ATGTCTGCCA CAGTGGCTTC 481 GAATGCAACC TTGATGTAGT CCTTTGGATC GGACACATTC TTTGCTGCGG AGAGGGTCTT 541 TTCACAAGTT TGTTTGTATG GTGTGGGTTG ACACATAGAT TCAACTGACT TTGTTGAAGT 601 TGCAACTCCA TTTGATGATG TATCAGAATC ATGTTTAGTC AGGGTGACAC AGGCTGCCAC 661 CACACAAGCC ACCACAAGAA CAGAAGCTAT TCCACCAATT ACCACCTT Predicted gene structure (within gDNA segment 71574 to 67191): Exon 1 70934 70587 ( 348 n); cDNA 4 353 ( 350 n); score: 0.835 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 354 383 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E333232- 0.835 379 0.535 C PGS_C01HBa0163B20.1-_SGN-E333232- (70934 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): AGAAACCACA GCATTAGGCT TGGAGGGAGA AATTTGAAGG AGCTTATGGC TACTGGCTTC 70875 |||||||||| |||||||||| || || ||| |||||||||| |||||| || |||| ||||| AGAAACCACA GCATTAGGCT TGANGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC 63 AACAAACCAG TCACTATTTG ATAACAATTT GCGGGTAAGG CCAGTGGTTT TTGTGATCGT 70815 ||||| || ||||| |||| |||||||||| |||||||||| || ||| ||| ||||||| | GACAAATGAG TCACTGTTTG ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT 123 TTCACCGAAA ACTGTTGGCC ATGGAAAGAG CATTGATACT CAGCT--C-T TTCGTATTCA 70758 |||||| ||| ||||| || |||||||||| ||||| |||| ||||| | | ||| ||| TTCACC-AAA GTTGTTGACC ATGGAAAGAG CATTGCTACT CAGCTCCCGG GTGGTACTCA 182 ATATCTTCAT CATTTTGTTG TGGGTTGCAC TCTGTTCTGA TTTGATAAAA CCATCTGAGC 70698 || |||||| ||||| || ||||||||| | | |||||| |||| | ||| |||||| | | TTAGCTTCAT CATTTCGTCA CGGGTTGCAC TGTATTCTGA TTTGGTGAAA CCATCTAAAC 242 AAGTCTCTTC ATAGGCAATC ACAGTGCTAA GCCATGTCTT GAGGTCTTCC ACCACATCCT 70638 |||||||||| ||| |||| |||| ||||| |||||| ||| |||||| ||| || | ||||| AAGTCTCTTC ATAAGCAACG ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCCT 302 TGATCTTAGA GAAATCAAAG TTCTCAATCT TAGCGATAGA GCGTCTTTGG TGTAAGGATC 70578 | ||||| || |||||||||| ||||||||| |||||||||| || ||| | | TCATCTTTGA GAAATCAAAG TTCTCAATCC TAGCGATAGA GCCCCTTAGT T......... 353 ACTGGCAGCT TTCTTAATCG GCTCGGTGTT TTTTGAGGTC ATTCTTGATG TCTGACACAG 70518 .......... .......... .......... .......... .......... .......... 353 GCTGGCACCA CAAGAACAGA AGCTATTCCA CCGATTACCA CCTTCTTTGC AATTTTATCA 70458 .......... .......... .......... .......... .......... .......... 353 AATCACATGT TAAGCCAATC ATAGTTTTGA AAAAGGCATG AAGTTTTGAC CATTAGTTTT 70398 .......... .......... .......... .......... .......... .......... 353 AAATGTGTGT GTTTTGGGAA AAAATAATCA TATGATAATT TGTTACAGCC GTTTTCAAAA 70338 .......... .......... .......... .......... .......... .......... 353 CTAAAGGTCA AAAACTTCAT GCCTTCGAGA AAATTTTATT TATTTTTGTA AAATAATAGT 70278 .......... .......... .......... .......... .......... .......... 353 TGAGTTGTCA CTTGATTTTT GGAAAATTAA GAAAACCATT TAAAAAGATA ATTTTGAAAT 70218 .......... .......... .......... .......... .......... .......... 353 TTTTTCAATG AACTTAATTT TAAGGGTTCA AGCGATCCTC TCAGAAAAGT TATATGTGGT 70158 .......... .......... .......... .......... .......... .......... 353 TGACCAACGA ATTAAATATG TCAATAATGA AAATATTTAA GAATTATTCG TGAAAAGAAC 70098 .......... .......... .......... .......... .......... .......... 353 TTATTTAAAA ATGAACAGAA ATTATTTGAT ACATAAACAT TCATACTATT TCAAGAAATG 70038 .......... .......... .......... .......... .......... .......... 353 AAATAATTCT AATGTGGAAG TTTCAGAAAT AATTCTAGCT TAACAATTTA TTCGAATCAA 69978 .......... .......... .......... .......... .......... .......... 353 AATTTTCAAA TAAGCGAGTA GCTCAAACGC TTAAATATGA ATATGTATTA TTTGATAACT 69918 .......... .......... .......... .......... .......... .......... 353 ATGAAAGAAT ATGAAAAATA TTTTAACTTA TCCTGACAAG CCTGGATTTG CCCAAAAGAC 69858 .......... .......... .......... .......... .......... .......... 353 AAGTTAGTTC ACTTAGCATT TGTGAAAAAG ATACATTTTT TTATTTAAGT CAATTGCACA 69798 .......... .......... .......... .......... .......... .......... 353 AACCTTGTAT TGTTTGTAAT CATGGAAGGA TTTGACATTT ATCCCTACCT TGTTAATAGA 69738 .......... .......... .......... .......... .......... .......... 353 ACTTCAAAAT ATACATGAGA GGTGGGCTAC ACCACGTCTC CCCGGTTACA TGTCAAAAGA 69678 .......... .......... .......... .......... .......... .......... 353 TATTTCTAAG ACTTCGGTTG AACACTTCCT TAGAGAGAAC ACTATTAATT AAAGACACTC 69618 .......... .......... .......... .......... .......... .......... 353 TAATTAGTGA AATAAAGGTA TCAATTCAAA CTCTTAATTT CTCGTTGAGG ATTCAATAAC 69558 .......... .......... .......... .......... .......... .......... 353 AAATCCACTA AAATATCATT AGGTAGTGTA TGAGAAGGGT ACAGTGTATG CAGAACATAT 69498 .......... .......... .......... .......... .......... .......... 353 TACTATCTCA ACGAGATAGA GAGACTTCTT CTGAAAGACT CTCGATTCAA GTTTATCAAA 69438 .......... .......... .......... .......... .......... .......... 353 ACCAAGTAAT TATATAAGAA AATAACAATG AAAAAAGCAT AGTCATTAAT TAATAAGAAA 69378 .......... .......... .......... .......... .......... .......... 353 AACAGTGCAA AGTCTACACG AAAAAAACAC TAACAAGAGT AAAATATTGT AATCAAACAC 69318 .......... .......... .......... .......... .......... .......... 353 ATTAACAACA TATGGCAGGA ACTACAAGGG TACAACAATT ACTATGACAG ACAAACAAAC 69258 .......... .......... .......... .......... .......... .......... 353 AAGCCTAAAC CTTCGCAAGG CAACACACCC TCCATCCCTT CTATCCCTCT ACCTTAATCA 69198 .......... .......... .......... .......... .......... .......... 353 AGGATCTATA CTCCTTCCTA TCTAGAGTCG TGACCTCGAT AACATGAAGT TGTGTCATAT 69138 .......... .......... .......... .......... .......... .......... 353 ATTGTATAAT CACCTTTTTC TCAATACTTC TTTGGCCTAC ATATATCCTT TGTGAATCCC 69078 || .......... .......... .......... .......... .......... .......CCT 356 CAACAACTAG ATTCTCACTC CTCCTCAC 69050 |||| |||| | || || | ||| |||| CAACGGCTAG A-TCAAACAC CTCTTCAC 383 hqPGS_C01HBa0163B20.1-_SGN-E333232- (70934 70587,69080 69050) ******************************************************************************** EST sequence 167 -strand 823 n (File: SGN-E334554-) 1 TAGAAACCAC AGCATTAGGC TTGAGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC 61 GACAAATGAG TCACTGTTTG ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT 121 TTCACCAAAG TTGTTGACCA TGGAAAGAGC ATTGCTACTC AGCTTCCCGG GTGGTACTCA 181 TTAGCTTCAT CATTTCGTCA CGGGTTGCAC TGTATTCTGA TTTGGTGAAA CCATCTAAAC 241 AAGTCTCTTC ATAAGCAACG ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCCT 301 TCATCTTTGA GAAATCAAAG TTCTCAATCC TAGCGATAGA GCCCCTTAGT TCCTCAACGG 361 CTAGATCAAA CACCTCTTCA CAAGCAAGGA GAGCGTCTTT GGTGTAAGGA TCACTGGCAG 421 CTTTCTTAAC TGGCTCAGTG TTCTTGATGG CATTCTTGAT GTCTGCCACA GTGGCTTCGA 481 ATGCAACCTT GATGTAGTCC TTTGGATCGG ACACATTCTT TGCTGCGGAG AGGGTCTTTT 541 CACAAGTTTG TTTGTATGGT GTGGGTTGAC ACATAGATTC AACTGACTTT GTTGAAGTTG 601 CAACTCCATT TGATGATGTA TCAGAATCAT GTTTAGTCAG GGTGACACAG GCTGCCACCA 661 CACAAGCCAC CACAAGAACA GAAGCTATTC CACCAATTAC CACCTTCTTT GTCATTTTTT 721 TGGTTTTTTG ATTTTTTTGG ATTTTTTTTA TGGGGGGAGT TCCCTATGAA ACAACCCCTA 781 TGGTTCTTCT TGTAAGTGAA GAACTCAGAG GGGTTTTATT GAA Predicted gene structure (within gDNA segment 75100 to 67549): Exon 1 70934 70587 ( 348 n); cDNA 2 351 ( 350 n); score: 0.830 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 352 381 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E334554- 0.830 379 0.461 C PGS_C01HBa0163B20.1-_SGN-E334554- (70934 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): AGAAACCACA GCATTAGGCT TGGAGGGAGA AATTTGAAGG AGCTTATGGC TACTGGCTTC 70875 |||||||||| |||||||||| | |||| ||| |||||||||| |||||| || |||| ||||| AGAAACCACA GCATTAGGCT T-GAGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC 60 AACAAACCAG TCACTATTTG ATAACAATTT GCGGGTAAGG CCAGTGGTTT TTGTGATCGT 70815 ||||| || ||||| |||| |||||||||| |||||||||| || ||| ||| ||||||| | GACAAATGAG TCACTGTTTG ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT 120 TTCACCGAAA ACTGTTGGCC ATGGAAAGAG CATTGATACT CAGC-T--C- TTTCGTATTC 70759 |||||| ||| ||||| || |||||||||| ||||| |||| |||| | | | ||| || TTCACC-AAA GTTGTTGACC ATGGAAAGAG CATTGCTACT CAGCTTCCCG GGTGGTACTC 179 AATATCTTCA TCATTTTGTT GTGGGTTGCA CTCTGTTCTG ATTTGATAAA ACCATCTGAG 70699 | || ||||| |||||| || |||||||| || | ||||| ||||| | || ||||||| | ATTAGCTTCA TCATTTCGTC ACGGGTTGCA CTGTATTCTG ATTTGGTGAA ACCATCTAAA 239 CAAGTCTCTT CATAGGCAAT CACAGTGCTA AGCCATGTCT TGAGGTCTTC CACCACATCC 70639 |||||||||| |||| |||| |||| |||| ||||||| || ||||||| || ||| | |||| CAAGTCTCTT CATAAGCAAC GACAGCGCTA AGCCATGACT TGAGGTCATC CACTATATCC 299 TTGATCTTAG AGAAATCAAA GTTCTCAATC TTAGCGATAG AGCGTCTTTG GTGTAAGGAT 70579 || ||||| | |||||||||| |||||||||| ||||||||| ||| ||| | | TTCATCTTTG AGAAATCAAA GTTCTCAATC CTAGCGATAG AGCCCCTTAG TT........ 351 CACTGGCAGC TTTCTTAATC GGCTCGGTGT TTTTTGAGGT CATTCTTGAT GTCTGACACA 70519 .......... .......... .......... .......... .......... .......... 351 GGCTGGCACC ACAAGAACAG AAGCTATTCC ACCGATTACC ACCTTCTTTG CAATTTTATC 70459 .......... .......... .......... .......... .......... .......... 351 AAATCACATG TTAAGCCAAT CATAGTTTTG AAAAAGGCAT GAAGTTTTGA CCATTAGTTT 70399 .......... .......... .......... .......... .......... .......... 351 TAAATGTGTG TGTTTTGGGA AAAAATAATC ATATGATAAT TTGTTACAGC CGTTTTCAAA 70339 .......... .......... .......... .......... .......... .......... 351 ACTAAAGGTC AAAAACTTCA TGCCTTCGAG AAAATTTTAT TTATTTTTGT AAAATAATAG 70279 .......... .......... .......... .......... .......... .......... 351 TTGAGTTGTC ACTTGATTTT TGGAAAATTA AGAAAACCAT TTAAAAAGAT AATTTTGAAA 70219 .......... .......... .......... .......... .......... .......... 351 TTTTTTCAAT GAACTTAATT TTAAGGGTTC AAGCGATCCT CTCAGAAAAG TTATATGTGG 70159 .......... .......... .......... .......... .......... .......... 351 TTGACCAACG AATTAAATAT GTCAATAATG AAAATATTTA AGAATTATTC GTGAAAAGAA 70099 .......... .......... .......... .......... .......... .......... 351 CTTATTTAAA AATGAACAGA AATTATTTGA TACATAAACA TTCATACTAT TTCAAGAAAT 70039 .......... .......... .......... .......... .......... .......... 351 GAAATAATTC TAATGTGGAA GTTTCAGAAA TAATTCTAGC TTAACAATTT ATTCGAATCA 69979 .......... .......... .......... .......... .......... .......... 351 AAATTTTCAA ATAAGCGAGT AGCTCAAACG CTTAAATATG AATATGTATT ATTTGATAAC 69919 .......... .......... .......... .......... .......... .......... 351 TATGAAAGAA TATGAAAAAT ATTTTAACTT ATCCTGACAA GCCTGGATTT GCCCAAAAGA 69859 .......... .......... .......... .......... .......... .......... 351 CAAGTTAGTT CACTTAGCAT TTGTGAAAAA GATACATTTT TTTATTTAAG TCAATTGCAC 69799 .......... .......... .......... .......... .......... .......... 351 AAACCTTGTA TTGTTTGTAA TCATGGAAGG ATTTGACATT TATCCCTACC TTGTTAATAG 69739 .......... .......... .......... .......... .......... .......... 351 AACTTCAAAA TATACATGAG AGGTGGGCTA CACCACGTCT CCCCGGTTAC ATGTCAAAAG 69679 .......... .......... .......... .......... .......... .......... 351 ATATTTCTAA GACTTCGGTT GAACACTTCC TTAGAGAGAA CACTATTAAT TAAAGACACT 69619 .......... .......... .......... .......... .......... .......... 351 CTAATTAGTG AAATAAAGGT ATCAATTCAA ACTCTTAATT TCTCGTTGAG GATTCAATAA 69559 .......... .......... .......... .......... .......... .......... 351 CAAATCCACT AAAATATCAT TAGGTAGTGT ATGAGAAGGG TACAGTGTAT GCAGAACATA 69499 .......... .......... .......... .......... .......... .......... 351 TTACTATCTC AACGAGATAG AGAGACTTCT TCTGAAAGAC TCTCGATTCA AGTTTATCAA 69439 .......... .......... .......... .......... .......... .......... 351 AACCAAGTAA TTATATAAGA AAATAACAAT GAAAAAAGCA TAGTCATTAA TTAATAAGAA 69379 .......... .......... .......... .......... .......... .......... 351 AAACAGTGCA AAGTCTACAC GAAAAAAACA CTAACAAGAG TAAAATATTG TAATCAAACA 69319 .......... .......... .......... .......... .......... .......... 351 CATTAACAAC ATATGGCAGG AACTACAAGG GTACAACAAT TACTATGACA GACAAACAAA 69259 .......... .......... .......... .......... .......... .......... 351 CAAGCCTAAA CCTTCGCAAG GCAACACACC CTCCATCCCT TCTATCCCTC TACCTTAATC 69199 .......... .......... .......... .......... .......... .......... 351 AAGGATCTAT ACTCCTTCCT ATCTAGAGTC GTGACCTCGA TAACATGAAG TTGTGTCATA 69139 .......... .......... .......... .......... .......... .......... 351 TATTGTATAA TCACCTTTTT CTCAATACTT CTTTGGCCTA CATATATCCT TTGTGAATCC 69079 || .......... .......... .......... .......... .......... ........CC 353 CCAACAACTA GATTCTCACT CCTCCTCAC 69050 |||| ||| || || || |||| |||| TCAACGGCTA GA-TCAAACA CCTCTTCAC 381 hqPGS_C01HBa0163B20.1-_SGN-E334554- (70934 70587,69080 69050) ******************************************************************************** EST sequence 158 -strand 818 n (File: SGN-E334509-) 1 AGCATTAGGC TGAGGGCAGA ATTTGAAGGA GCTTACGGTT ACTAGCTTCG ACAAATGAGT 61 CACTGTTTGA TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT TCACCAAAGT 121 TGTTGACCAT GGAAAGAGCA TTGCTACTCA GCTCCCCGGG TGGTACTCAT TAGCTTCATC 181 ATTTCGTCAC GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA AGTCTCTTCA 241 TAAGCAACGA CAGCGCTAAG CCATGACTTG AGGTCATCCA CTATATCCTT CATCTTTGAG 301 AAATCAAAGT TCTCAATCCT AGCGATAGAG CCCCTTAGTT CCTCAACGGC TAGATCAAAC 361 ACCTCTTCAC AAGCAAGGAG AGCGTCTTTG GTGTAAGGAT CACTGGCAGC TTTCTTAACT 421 GGCTCAGTGT TCTTGATGGC ATTCTTGATG TCTGCCACAG TGGCTTCGAA TGCAACCTTG 481 ATGTAGTCCT TTGGATCGGA CACATTCTTT GCTGCGGAGA GGGTCTTTTC ACAAGTTTGT 541 TTGTATGGTG TGGGTTGACA CATAGATTCA ACTGACTTTG TTGAAGTTGC AACTCCATTT 601 GATGATGTAT CAGAATCATG TTTAGTCAGG GTGACACAGG CTGCCACCAC ACAAGCCACC 661 ACAAGAACAG AAGCTATTCC ACCAATTACC ACCTTCTTTG TCATTTTTTT GGTTTTTTGA 721 TTTTTTTGGA TTTTTTTTAT GGGGGGAGTT CCCTATGAAA CAACCCCTAT GGTTCTTCTT 781 GTAAGTGAAG AACTCAGAGG GGTTTTATTG AAGGCTGT Predicted gene structure (within gDNA segment 74990 to 67489): Exon 1 70925 70587 ( 339 n); cDNA 1 340 ( 340 n); score: 0.817 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 341 370 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E334509- 0.817 370 0.452 C PGS_C01HBa0163B20.1-_SGN-E334509- (70925 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): AGCATTAGGC TTGGAGGGAG AAATTTGAAG GAGCTTATGG CTACTGGCTT CAACAAACCA 70866 |||||||||| | ||||| ||||||||| ||||||| || |||| |||| | ||||| | AGCATTAGGC -T-GAGGGCA GAATTTGAAG GAGCTTACGG TTACTAGCTT CGACAAATGA 58 GTCACTATTT GATAACAATT TGCGGGTAAG GCCAGTGGTT TTTGTGATCG TTTCACCGAA 70806 |||||| ||| |||||||||| |||||||||| ||| ||| || | ||||||| ||||||| || GTCACTGTTT GATAACAATT TGCGGGTAAG GCCTGTGTTT TGTGTGATCA TTTCACC-AA 117 AACTGTTGGC CATGGAAAGA GCATTGATAC TCAGCT---C -TTTCGTATT CAATATCTTC 70750 | ||||| | |||||||||| |||||| ||| |||||| | | ||| | || || |||| AGTTGTTGAC CATGGAAAGA GCATTGCTAC TCAGCTCCCC GGGTGGTACT CATTAGCTTC 177 ATCATTTTGT TGTGGGTTGC ACTCTGTTCT GATTTGATAA AACCATCTGA GCAAGTCTCT 70690 ||||||| || ||||||| ||| | |||| |||||| | | |||||||| | ||||||||| ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA ACAAGTCTCT 237 TCATAGGCAA TCACAGTGCT AAGCCATGTC TTGAGGTCTT CCACCACATC CTTGATCTTA 70630 ||||| |||| |||| ||| |||||||| | |||||||| | |||| | ||| ||| ||||| TCATAAGCAA CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC CTTCATCTTT 297 GAGAAATCAA AGTTCTCAAT CTTAGCGATA GAGCGTCTTT GGTGTAAGGA TCACTGGCAG 70570 |||||||||| |||||||||| | |||||||| |||| ||| | | GAGAAATCAA AGTTCTCAAT CCTAGCGATA GAGCCCCTTA GTT....... .......... 340 CTTTCTTAAT CGGCTCGGTG TTTTTTGAGG TCATTCTTGA TGTCTGACAC AGGCTGGCAC 70510 .......... .......... .......... .......... .......... .......... 340 CACAAGAACA GAAGCTATTC CACCGATTAC CACCTTCTTT GCAATTTTAT CAAATCACAT 70450 .......... .......... .......... .......... .......... .......... 340 GTTAAGCCAA TCATAGTTTT GAAAAAGGCA TGAAGTTTTG ACCATTAGTT TTAAATGTGT 70390 .......... .......... .......... .......... .......... .......... 340 GTGTTTTGGG AAAAAATAAT CATATGATAA TTTGTTACAG CCGTTTTCAA AACTAAAGGT 70330 .......... .......... .......... .......... .......... .......... 340 CAAAAACTTC ATGCCTTCGA GAAAATTTTA TTTATTTTTG TAAAATAATA GTTGAGTTGT 70270 .......... .......... .......... .......... .......... .......... 340 CACTTGATTT TTGGAAAATT AAGAAAACCA TTTAAAAAGA TAATTTTGAA ATTTTTTCAA 70210 .......... .......... .......... .......... .......... .......... 340 TGAACTTAAT TTTAAGGGTT CAAGCGATCC TCTCAGAAAA GTTATATGTG GTTGACCAAC 70150 .......... .......... .......... .......... .......... .......... 340 GAATTAAATA TGTCAATAAT GAAAATATTT AAGAATTATT CGTGAAAAGA ACTTATTTAA 70090 .......... .......... .......... .......... .......... .......... 340 AAATGAACAG AAATTATTTG ATACATAAAC ATTCATACTA TTTCAAGAAA TGAAATAATT 70030 .......... .......... .......... .......... .......... .......... 340 CTAATGTGGA AGTTTCAGAA ATAATTCTAG CTTAACAATT TATTCGAATC AAAATTTTCA 69970 .......... .......... .......... .......... .......... .......... 340 AATAAGCGAG TAGCTCAAAC GCTTAAATAT GAATATGTAT TATTTGATAA CTATGAAAGA 69910 .......... .......... .......... .......... .......... .......... 340 ATATGAAAAA TATTTTAACT TATCCTGACA AGCCTGGATT TGCCCAAAAG ACAAGTTAGT 69850 .......... .......... .......... .......... .......... .......... 340 TCACTTAGCA TTTGTGAAAA AGATACATTT TTTTATTTAA GTCAATTGCA CAAACCTTGT 69790 .......... .......... .......... .......... .......... .......... 340 ATTGTTTGTA ATCATGGAAG GATTTGACAT TTATCCCTAC CTTGTTAATA GAACTTCAAA 69730 .......... .......... .......... .......... .......... .......... 340 ATATACATGA GAGGTGGGCT ACACCACGTC TCCCCGGTTA CATGTCAAAA GATATTTCTA 69670 .......... .......... .......... .......... .......... .......... 340 AGACTTCGGT TGAACACTTC CTTAGAGAGA ACACTATTAA TTAAAGACAC TCTAATTAGT 69610 .......... .......... .......... .......... .......... .......... 340 GAAATAAAGG TATCAATTCA AACTCTTAAT TTCTCGTTGA GGATTCAATA ACAAATCCAC 69550 .......... .......... .......... .......... .......... .......... 340 TAAAATATCA TTAGGTAGTG TATGAGAAGG GTACAGTGTA TGCAGAACAT ATTACTATCT 69490 .......... .......... .......... .......... .......... .......... 340 CAACGAGATA GAGAGACTTC TTCTGAAAGA CTCTCGATTC AAGTTTATCA AAACCAAGTA 69430 .......... .......... .......... .......... .......... .......... 340 ATTATATAAG AAAATAACAA TGAAAAAAGC ATAGTCATTA ATTAATAAGA AAAACAGTGC 69370 .......... .......... .......... .......... .......... .......... 340 AAAGTCTACA CGAAAAAAAC ACTAACAAGA GTAAAATATT GTAATCAAAC ACATTAACAA 69310 .......... .......... .......... .......... .......... .......... 340 CATATGGCAG GAACTACAAG GGTACAACAA TTACTATGAC AGACAAACAA ACAAGCCTAA 69250 .......... .......... .......... .......... .......... .......... 340 ACCTTCGCAA GGCAACACAC CCTCCATCCC TTCTATCCCT CTACCTTAAT CAAGGATCTA 69190 .......... .......... .......... .......... .......... .......... 340 TACTCCTTCC TATCTAGAGT CGTGACCTCG ATAACATGAA GTTGTGTCAT ATATTGTATA 69130 .......... .......... .......... .......... .......... .......... 340 ATCACCTTTT TCTCAATACT TCTTTGGCCT ACATATATCC TTTGTGAATC CCCAACAACT 69070 | | |||| || .......... .......... .......... .......... .........C CTCAACGGCT 351 AGATTCTCAC TCCTCCTCAC 69050 ||| || || |||| |||| AGA-TCAAAC ACCTCTTCAC 370 hqPGS_C01HBa0163B20.1-_SGN-E334509- (70925 70587,69080 69050) ******************************************************************************** EST sequence 155 -strand 816 n (File: SGN-E334504-) 1 GCATTAGGCT TGAGGCAGAA ATTTGAAGGA GCTTACGGTT ACTAGCTTCG ACAAATGAGT 61 CACTGTTTGA TANCAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT TCACCAAAGT 121 TGTTGACCAT GAAAAGAGCA TTGCTACTCA GCTCCCGGGT GGTACTCATT AGCTTCATCA 181 TTTCGTCACG GGTTGCACTG TATTCTGATT TGGTGAAACC ATCTAAACAA GTCTCTTCAT 241 AAGCAACGAC AGCGCTAAGC CATGACTTGA GGTCATCCAC TATATCCTTC ATCTTTGAGA 301 AATCAAAGTT CTCAATCCTA GCGATAGAGC CCCTTAGTTC CTCAACGGCT AGATCAAACA 361 CCTCTTCACA AGCAAGGAGA GCGTCTTTGG TGTAAGGATC ACTGGCAGCT TTCTTAACTG 421 GCTCAGTGTT CTTGATGGCA TTCTTGATGT CTGCCACAGT GGCTTCGAAT GCAACCTTGA 481 TGTAGTCCTT TGGATCGGAC ACATTCTTTG CTGCGGAGAG GGTCTTTTCA CAAGTTTGTT 541 TGTATGGTGT GGGTTGACAC ATAGATTCAA CTGACTTTGT TGAAGTTGCA ACTCCATTTG 601 ATGATGTATC AGAATCATGT TTAGTCAGGG TGACACAGGC TGCCACCACA CAAGCCACCA 661 CAAGAACAGA AGCTATTCCA CCAATTACCA CCTTCTTTGT CATTTTTTTG GTTTTTTGAT 721 TTTTTTGGAT TTTTTTTATG GGGGGAGTTC CCTATGAAAC AACCCCTATG GTTCTTCTTG 781 TAAGTGAAGA ACTCAGAGGG GTTTTATTGA AGGCTG Predicted gene structure (within gDNA segment 74980 to 67499): Exon 1 70924 70587 ( 338 n); cDNA 1 339 ( 339 n); score: 0.827 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 340 369 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E334504- 0.827 369 0.452 C PGS_C01HBa0163B20.1-_SGN-E334504- (70924 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): GCATTAGGCT TGGAGGGAGA AATTTGAAGG AGCTTATGGC TACTGGCTTC AACAAACCAG 70865 |||||||||| | |||| ||| |||||||||| |||||| || |||| ||||| ||||| || GCATTAGGCT T-GAGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC GACAAATGAG 59 TCACTATTTG ATAACAATTT GCGGGTAAGG CCAGTGGTTT TTGTGATCGT TTCACCGAAA 70805 ||||| |||| ||| |||||| |||||||||| || ||| ||| ||||||| | |||||| ||| TCACTGTTTG ATANCAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT TTCACC-AAA 118 ACTGTTGGCC ATGGAAAGAG CATTGATACT CAGCT--C-T TTCGTATTCA ATATCTTCAT 70748 ||||| || ||| |||||| ||||| |||| ||||| | | ||| ||| || |||||| GTTGTTGACC ATGAAAAGAG CATTGCTACT CAGCTCCCGG GTGGTACTCA TTAGCTTCAT 178 CATTTTGTTG TGGGTTGCAC TCTGTTCTGA TTTGATAAAA CCATCTGAGC AAGTCTCTTC 70688 ||||| || ||||||||| | | |||||| |||| | ||| |||||| | | |||||||||| CATTTCGTCA CGGGTTGCAC TGTATTCTGA TTTGGTGAAA CCATCTAAAC AAGTCTCTTC 238 ATAGGCAATC ACAGTGCTAA GCCATGTCTT GAGGTCTTCC ACCACATCCT TGATCTTAGA 70628 ||| |||| |||| ||||| |||||| ||| |||||| ||| || | ||||| | ||||| || ATAAGCAACG ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCCT TCATCTTTGA 298 GAAATCAAAG TTCTCAATCT TAGCGATAGA GCGTCTTTGG TGTAAGGATC ACTGGCAGCT 70568 |||||||||| ||||||||| |||||||||| || ||| | | GAAATCAAAG TTCTCAATCC TAGCGATAGA GCCCCTTAGT T......... .......... 339 TTCTTAATCG GCTCGGTGTT TTTTGAGGTC ATTCTTGATG TCTGACACAG GCTGGCACCA 70508 .......... .......... .......... .......... .......... .......... 339 CAAGAACAGA AGCTATTCCA CCGATTACCA CCTTCTTTGC AATTTTATCA AATCACATGT 70448 .......... .......... .......... .......... .......... .......... 339 TAAGCCAATC ATAGTTTTGA AAAAGGCATG AAGTTTTGAC CATTAGTTTT AAATGTGTGT 70388 .......... .......... .......... .......... .......... .......... 339 GTTTTGGGAA AAAATAATCA TATGATAATT TGTTACAGCC GTTTTCAAAA CTAAAGGTCA 70328 .......... .......... .......... .......... .......... .......... 339 AAAACTTCAT GCCTTCGAGA AAATTTTATT TATTTTTGTA AAATAATAGT TGAGTTGTCA 70268 .......... .......... .......... .......... .......... .......... 339 CTTGATTTTT GGAAAATTAA GAAAACCATT TAAAAAGATA ATTTTGAAAT TTTTTCAATG 70208 .......... .......... .......... .......... .......... .......... 339 AACTTAATTT TAAGGGTTCA AGCGATCCTC TCAGAAAAGT TATATGTGGT TGACCAACGA 70148 .......... .......... .......... .......... .......... .......... 339 ATTAAATATG TCAATAATGA AAATATTTAA GAATTATTCG TGAAAAGAAC TTATTTAAAA 70088 .......... .......... .......... .......... .......... .......... 339 ATGAACAGAA ATTATTTGAT ACATAAACAT TCATACTATT TCAAGAAATG AAATAATTCT 70028 .......... .......... .......... .......... .......... .......... 339 AATGTGGAAG TTTCAGAAAT AATTCTAGCT TAACAATTTA TTCGAATCAA AATTTTCAAA 69968 .......... .......... .......... .......... .......... .......... 339 TAAGCGAGTA GCTCAAACGC TTAAATATGA ATATGTATTA TTTGATAACT ATGAAAGAAT 69908 .......... .......... .......... .......... .......... .......... 339 ATGAAAAATA TTTTAACTTA TCCTGACAAG CCTGGATTTG CCCAAAAGAC AAGTTAGTTC 69848 .......... .......... .......... .......... .......... .......... 339 ACTTAGCATT TGTGAAAAAG ATACATTTTT TTATTTAAGT CAATTGCACA AACCTTGTAT 69788 .......... .......... .......... .......... .......... .......... 339 TGTTTGTAAT CATGGAAGGA TTTGACATTT ATCCCTACCT TGTTAATAGA ACTTCAAAAT 69728 .......... .......... .......... .......... .......... .......... 339 ATACATGAGA GGTGGGCTAC ACCACGTCTC CCCGGTTACA TGTCAAAAGA TATTTCTAAG 69668 .......... .......... .......... .......... .......... .......... 339 ACTTCGGTTG AACACTTCCT TAGAGAGAAC ACTATTAATT AAAGACACTC TAATTAGTGA 69608 .......... .......... .......... .......... .......... .......... 339 AATAAAGGTA TCAATTCAAA CTCTTAATTT CTCGTTGAGG ATTCAATAAC AAATCCACTA 69548 .......... .......... .......... .......... .......... .......... 339 AAATATCATT AGGTAGTGTA TGAGAAGGGT ACAGTGTATG CAGAACATAT TACTATCTCA 69488 .......... .......... .......... .......... .......... .......... 339 ACGAGATAGA GAGACTTCTT CTGAAAGACT CTCGATTCAA GTTTATCAAA ACCAAGTAAT 69428 .......... .......... .......... .......... .......... .......... 339 TATATAAGAA AATAACAATG AAAAAAGCAT AGTCATTAAT TAATAAGAAA AACAGTGCAA 69368 .......... .......... .......... .......... .......... .......... 339 AGTCTACACG AAAAAAACAC TAACAAGAGT AAAATATTGT AATCAAACAC ATTAACAACA 69308 .......... .......... .......... .......... .......... .......... 339 TATGGCAGGA ACTACAAGGG TACAACAATT ACTATGACAG ACAAACAAAC AAGCCTAAAC 69248 .......... .......... .......... .......... .......... .......... 339 CTTCGCAAGG CAACACACCC TCCATCCCTT CTATCCCTCT ACCTTAATCA AGGATCTATA 69188 .......... .......... .......... .......... .......... .......... 339 CTCCTTCCTA TCTAGAGTCG TGACCTCGAT AACATGAAGT TGTGTCATAT ATTGTATAAT 69128 .......... .......... .......... .......... .......... .......... 339 CACCTTTTTC TCAATACTTC TTTGGCCTAC ATATATCCTT TGTGAATCCC CAACAACTAG 69068 || |||| |||| .......... .......... .......... .......... .......CCT CAACGGCTAG 352 ATTCTCACTC CTCCTCAC 69050 | || || | ||| |||| A-TCAAACAC CTCTTCAC 369 hqPGS_C01HBa0163B20.1-_SGN-E334504- (70924 70587,69080 69050) ******************************************************************************** EST sequence 96 -strand 746 n (File: SGN-E332545-) 1 ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT TTCACCAAAG TGNTTGACCA 61 TGAAAAGAGC ATTGCTACTC AGCTCCCGGG TGGTACTCAT TAGCTTCATC ATTTCGTCAC 121 GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA AGTCTCTTCA TAAGCAACGA 181 CAGCGCTAAG CCATGACTTG AGGTCATCCA CTATATCCTT CATCTTTGAG AAATCAAAGT 241 TCTCAATCCT AGCGATAGAG CCCCTTAGTT CCTCAACGGC TAGATCAAAC ACCTCTTCAC 301 AAGCAAGGAG AGCGTCTTTG GTGTAAGGAT CACTGGCAGC TTTCTTAACT GGCTCAGTGT 361 TCTTGATGGC ATTCTTGATG TCTGCCACAG TGGCTTCGAA TGCAACCTTG ATGTAGTCCT 421 TTGGATCGGA CACATTCTTT GCTGCGGAGA GGGTCTTTTC ACAAGTTTGT TTGTATGGTG 481 TGGGTTGACA CATAGATTCA ACTGACTTTG TTGAAGTTGC AACTCCATTT GATGATGTAT 541 CAGAATCATG TTTAGTCAGG GTGACACAGG CTGCCACCAC ACAAGCCACC ACAAGAACAG 601 AAGCTATTCC ACCAATTACC ACCTTCTTTG TCATTTTTTT GGTTTTTTGA TTTTTTTGGA 661 TTTTTTTTAT GGGGGGAGTT CCCTATGAAA CAACCCCTAT GGTTCTTCTT GTAAGTGAAG 721 AACTCAGAGG GGTTTTATTG AAGGCT Predicted gene structure (within gDNA segment 74290 to 67509): Exon 1 70854 70587 ( 268 n); cDNA 1 270 ( 270 n); score: 0.812 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 271 300 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E332545- 0.812 299 0.401 C PGS_C01HBa0163B20.1-_SGN-E332545- (70854 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): ATAACAATTT GCGGGTAAGG CCAGTGGTTT TTGTGATCGT TTCACCGAAA ACTGTTGGCC 70795 |||||||||| |||||||||| || ||| ||| ||||||| | |||||| ||| ||| || ATAACAATTT GCGGGTAAGG CCTGTGTTTT GTGTGATCAT TTCACC-AAA GTGNTTGACC 59 ATGGAAAGAG CATTGATACT CAGCT--C-T TTCGTATTCA ATATCTTCAT CATTTTGTTG 70738 ||| |||||| ||||| |||| ||||| | | ||| ||| || |||||| ||||| || ATGAAAAGAG CATTGCTACT CAGCTCCCGG GTGGTACTCA TTAGCTTCAT CATTTCGTCA 119 TGGGTTGCAC TCTGTTCTGA TTTGATAAAA CCATCTGAGC AAGTCTCTTC ATAGGCAATC 70678 ||||||||| | | |||||| |||| | ||| |||||| | | |||||||||| ||| |||| CGGGTTGCAC TGTATTCTGA TTTGGTGAAA CCATCTAAAC AAGTCTCTTC ATAAGCAACG 179 ACAGTGCTAA GCCATGTCTT GAGGTCTTCC ACCACATCCT TGATCTTAGA GAAATCAAAG 70618 |||| ||||| |||||| ||| |||||| ||| || | ||||| | ||||| || |||||||||| ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCCT TCATCTTTGA GAAATCAAAG 239 TTCTCAATCT TAGCGATAGA GCGTCTTTGG TGTAAGGATC ACTGGCAGCT TTCTTAATCG 70558 ||||||||| |||||||||| || ||| | | TTCTCAATCC TAGCGATAGA GCCCCTTAGT T......... .......... .......... 270 GCTCGGTGTT TTTTGAGGTC ATTCTTGATG TCTGACACAG GCTGGCACCA CAAGAACAGA 70498 .......... .......... .......... .......... .......... .......... 270 AGCTATTCCA CCGATTACCA CCTTCTTTGC AATTTTATCA AATCACATGT TAAGCCAATC 70438 .......... .......... .......... .......... .......... .......... 270 ATAGTTTTGA AAAAGGCATG AAGTTTTGAC CATTAGTTTT AAATGTGTGT GTTTTGGGAA 70378 .......... .......... .......... .......... .......... .......... 270 AAAATAATCA TATGATAATT TGTTACAGCC GTTTTCAAAA CTAAAGGTCA AAAACTTCAT 70318 .......... .......... .......... .......... .......... .......... 270 GCCTTCGAGA AAATTTTATT TATTTTTGTA AAATAATAGT TGAGTTGTCA CTTGATTTTT 70258 .......... .......... .......... .......... .......... .......... 270 GGAAAATTAA GAAAACCATT TAAAAAGATA ATTTTGAAAT TTTTTCAATG AACTTAATTT 70198 .......... .......... .......... .......... .......... .......... 270 TAAGGGTTCA AGCGATCCTC TCAGAAAAGT TATATGTGGT TGACCAACGA ATTAAATATG 70138 .......... .......... .......... .......... .......... .......... 270 TCAATAATGA AAATATTTAA GAATTATTCG TGAAAAGAAC TTATTTAAAA ATGAACAGAA 70078 .......... .......... .......... .......... .......... .......... 270 ATTATTTGAT ACATAAACAT TCATACTATT TCAAGAAATG AAATAATTCT AATGTGGAAG 70018 .......... .......... .......... .......... .......... .......... 270 TTTCAGAAAT AATTCTAGCT TAACAATTTA TTCGAATCAA AATTTTCAAA TAAGCGAGTA 69958 .......... .......... .......... .......... .......... .......... 270 GCTCAAACGC TTAAATATGA ATATGTATTA TTTGATAACT ATGAAAGAAT ATGAAAAATA 69898 .......... .......... .......... .......... .......... .......... 270 TTTTAACTTA TCCTGACAAG CCTGGATTTG CCCAAAAGAC AAGTTAGTTC ACTTAGCATT 69838 .......... .......... .......... .......... .......... .......... 270 TGTGAAAAAG ATACATTTTT TTATTTAAGT CAATTGCACA AACCTTGTAT TGTTTGTAAT 69778 .......... .......... .......... .......... .......... .......... 270 CATGGAAGGA TTTGACATTT ATCCCTACCT TGTTAATAGA ACTTCAAAAT ATACATGAGA 69718 .......... .......... .......... .......... .......... .......... 270 GGTGGGCTAC ACCACGTCTC CCCGGTTACA TGTCAAAAGA TATTTCTAAG ACTTCGGTTG 69658 .......... .......... .......... .......... .......... .......... 270 AACACTTCCT TAGAGAGAAC ACTATTAATT AAAGACACTC TAATTAGTGA AATAAAGGTA 69598 .......... .......... .......... .......... .......... .......... 270 TCAATTCAAA CTCTTAATTT CTCGTTGAGG ATTCAATAAC AAATCCACTA AAATATCATT 69538 .......... .......... .......... .......... .......... .......... 270 AGGTAGTGTA TGAGAAGGGT ACAGTGTATG CAGAACATAT TACTATCTCA ACGAGATAGA 69478 .......... .......... .......... .......... .......... .......... 270 GAGACTTCTT CTGAAAGACT CTCGATTCAA GTTTATCAAA ACCAAGTAAT TATATAAGAA 69418 .......... .......... .......... .......... .......... .......... 270 AATAACAATG AAAAAAGCAT AGTCATTAAT TAATAAGAAA AACAGTGCAA AGTCTACACG 69358 .......... .......... .......... .......... .......... .......... 270 AAAAAAACAC TAACAAGAGT AAAATATTGT AATCAAACAC ATTAACAACA TATGGCAGGA 69298 .......... .......... .......... .......... .......... .......... 270 ACTACAAGGG TACAACAATT ACTATGACAG ACAAACAAAC AAGCCTAAAC CTTCGCAAGG 69238 .......... .......... .......... .......... .......... .......... 270 CAACACACCC TCCATCCCTT CTATCCCTCT ACCTTAATCA AGGATCTATA CTCCTTCCTA 69178 .......... .......... .......... .......... .......... .......... 270 TCTAGAGTCG TGACCTCGAT AACATGAAGT TGTGTCATAT ATTGTATAAT CACCTTTTTC 69118 .......... .......... .......... .......... .......... .......... 270 TCAATACTTC TTTGGCCTAC ATATATCCTT TGTGAATCCC CAACAACTAG ATTCTCACTC 69058 || |||| |||| | || || | .......... .......... .......... .......CCT CAACGGCTAG A-TCAAACAC 292 CTCCTCAC 69050 ||| |||| CTCTTCAC 300 hqPGS_C01HBa0163B20.1-_SGN-E332545- (70854 70587,69080 69050) ******************************************************************************** EST sequence 132 -strand 702 n (File: SGN-E333363-) 1 GTTTTGTGTG ATCATTTCAC CAAAGTTGNT GACCATGGAA GAGCCATTGC TACTCAGCTC 61 CCCGGTGGTA CTCATTAGCT TCATCATTTC GTCACGGGTT GCACTGTATT CTGATTTGGT 121 GAAACCATCT AAACAAGTCT CTTCATAAGC AACGACAGCG CTAAGCCATG ACTTGAGGTC 181 ATCCACTATA TCCTTCATCT TTGAGAAATC AAAGTTCTCA ATCCTAGCGA TAGAGCCCCT 241 TAGTTCCTCA ACGGCTAGAT CAAACACCTC TTCACAAGCA AGGAGAGCGT CTTTGGTGTA 301 AGGATCACTG GCAGCTTTCT TAACTGGCTC AGTGTTCTTG ATGGCATTCT TGATGTCTGC 361 CACAGTGGCT TCGAATGCAA CCTTGATGTA GTCCTTTGGA TCGGACACAT TCTTTGCTGC 421 GGAGAGGGTC TTTTCACAAG TTTGTTTGTA TGGTGTGGGT TGACACATAG ATTCAACTGA 481 CTTTGTTGAA GTTGCAACTC CATTTGATGA TGTATCAGAA TCATGTTTAG TCAGGGTGAC 541 ACAGGCTGCC ACCACACAAG CCACCACAAG AACAGAAGCT ATTCCACCAA TTACCACCTT 601 CTTTGTCATT TTTTTGGTTT TTTGATTTTT TTGGATTTTT TTTATGGGGG GAGTTCCCTA 661 TGAAACAACC CCTATGGTTC TTCTTGTAAG TGAAGAACTC AG Predicted gene structure (within gDNA segment 74040 to 67099): Exon 1 70827 70587 ( 241 n); cDNA 3 245 ( 243 n); score: 0.790 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 246 275 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E333363- 0.790 272 0.387 C PGS_C01HBa0163B20.1-_SGN-E333363- (70827 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): TTTTTGTGAT CGTTTCACCG AAAACTGTTG GCCATGGAAA GAGCATTGAT ACTCAGCT-- 70770 ||| |||||| | ||||||| ||| || || |||||||| ||||| | |||||||| TTTGTGTGAT CATTTCACC- AAAGTTGNTG ACCATGGAAG AGCCATTGCT ACTCAGCTCC 61 CTT-TCGTAT TCAATATCTT CATCATTTTG TTGTGGGTTG CACTCTGTTC TGATTTGATA 70711 | | ||| ||| || ||| |||||||| | | |||||| |||| | ||| ||||||| | CCGGTGGTAC TCATTAGCTT CATCATTTCG TCACGGGTTG CACTGTATTC TGATTTGGTG 121 AAACCATCTG AGCAAGTCTC TTCATAGGCA ATCACAGTGC TAAGCCATGT CTTGAGGTCT 70651 ||||||||| | |||||||| |||||| ||| | |||| || ||||||||| ||||||||| AAACCATCTA AACAAGTCTC TTCATAAGCA ACGACAGCGC TAAGCCATGA CTTGAGGTCA 181 TCCACCACAT CCTTGATCTT AGAGAAATCA AAGTTCTCAA TCTTAGCGAT AGAGCGTCTT 70591 ||||| | || |||| ||||| ||||||||| |||||||||| || ||||||| ||||| ||| TCCACTATAT CCTTCATCTT TGAGAAATCA AAGTTCTCAA TCCTAGCGAT AGAGCCCCTT 241 TGGTGTAAGG ATCACTGGCA GCTTTCTTAA TCGGCTCGGT GTTTTTTGAG GTCATTCTTG 70531 | | AGTT...... .......... .......... .......... .......... .......... 245 ATGTCTGACA CAGGCTGGCA CCACAAGAAC AGAAGCTATT CCACCGATTA CCACCTTCTT 70471 .......... .......... .......... .......... .......... .......... 245 TGCAATTTTA TCAAATCACA TGTTAAGCCA ATCATAGTTT TGAAAAAGGC ATGAAGTTTT 70411 .......... .......... .......... .......... .......... .......... 245 GACCATTAGT TTTAAATGTG TGTGTTTTGG GAAAAAATAA TCATATGATA ATTTGTTACA 70351 .......... .......... .......... .......... .......... .......... 245 GCCGTTTTCA AAACTAAAGG TCAAAAACTT CATGCCTTCG AGAAAATTTT ATTTATTTTT 70291 .......... .......... .......... .......... .......... .......... 245 GTAAAATAAT AGTTGAGTTG TCACTTGATT TTTGGAAAAT TAAGAAAACC ATTTAAAAAG 70231 .......... .......... .......... .......... .......... .......... 245 ATAATTTTGA AATTTTTTCA ATGAACTTAA TTTTAAGGGT TCAAGCGATC CTCTCAGAAA 70171 .......... .......... .......... .......... .......... .......... 245 AGTTATATGT GGTTGACCAA CGAATTAAAT ATGTCAATAA TGAAAATATT TAAGAATTAT 70111 .......... .......... .......... .......... .......... .......... 245 TCGTGAAAAG AACTTATTTA AAAATGAACA GAAATTATTT GATACATAAA CATTCATACT 70051 .......... .......... .......... .......... .......... .......... 245 ATTTCAAGAA ATGAAATAAT TCTAATGTGG AAGTTTCAGA AATAATTCTA GCTTAACAAT 69991 .......... .......... .......... .......... .......... .......... 245 TTATTCGAAT CAAAATTTTC AAATAAGCGA GTAGCTCAAA CGCTTAAATA TGAATATGTA 69931 .......... .......... .......... .......... .......... .......... 245 TTATTTGATA ACTATGAAAG AATATGAAAA ATATTTTAAC TTATCCTGAC AAGCCTGGAT 69871 .......... .......... .......... .......... .......... .......... 245 TTGCCCAAAA GACAAGTTAG TTCACTTAGC ATTTGTGAAA AAGATACATT TTTTTATTTA 69811 .......... .......... .......... .......... .......... .......... 245 AGTCAATTGC ACAAACCTTG TATTGTTTGT AATCATGGAA GGATTTGACA TTTATCCCTA 69751 .......... .......... .......... .......... .......... .......... 245 CCTTGTTAAT AGAACTTCAA AATATACATG AGAGGTGGGC TACACCACGT CTCCCCGGTT 69691 .......... .......... .......... .......... .......... .......... 245 ACATGTCAAA AGATATTTCT AAGACTTCGG TTGAACACTT CCTTAGAGAG AACACTATTA 69631 .......... .......... .......... .......... .......... .......... 245 ATTAAAGACA CTCTAATTAG TGAAATAAAG GTATCAATTC AAACTCTTAA TTTCTCGTTG 69571 .......... .......... .......... .......... .......... .......... 245 AGGATTCAAT AACAAATCCA CTAAAATATC ATTAGGTAGT GTATGAGAAG GGTACAGTGT 69511 .......... .......... .......... .......... .......... .......... 245 ATGCAGAACA TATTACTATC TCAACGAGAT AGAGAGACTT CTTCTGAAAG ACTCTCGATT 69451 .......... .......... .......... .......... .......... .......... 245 CAAGTTTATC AAAACCAAGT AATTATATAA GAAAATAACA ATGAAAAAAG CATAGTCATT 69391 .......... .......... .......... .......... .......... .......... 245 AATTAATAAG AAAAACAGTG CAAAGTCTAC ACGAAAAAAA CACTAACAAG AGTAAAATAT 69331 .......... .......... .......... .......... .......... .......... 245 TGTAATCAAA CACATTAACA ACATATGGCA GGAACTACAA GGGTACAACA ATTACTATGA 69271 .......... .......... .......... .......... .......... .......... 245 CAGACAAACA AACAAGCCTA AACCTTCGCA AGGCAACACA CCCTCCATCC CTTCTATCCC 69211 .......... .......... .......... .......... .......... .......... 245 TCTACCTTAA TCAAGGATCT ATACTCCTTC CTATCTAGAG TCGTGACCTC GATAACATGA 69151 .......... .......... .......... .......... .......... .......... 245 AGTTGTGTCA TATATTGTAT AATCACCTTT TTCTCAATAC TTCTTTGGCC TACATATATC 69091 .......... .......... .......... .......... .......... .......... 245 CTTTGTGAAT CCCCAACAAC TAGATTCTCA CTCCTCCTCA C 69050 || |||| | |||| || | | |||| ||| | .......... CCTCAACGGC TAGA-TCAAA CACCTCTTCA C 275 hqPGS_C01HBa0163B20.1-_SGN-E333363- (70827 70587,69080 69050) ******************************************************************************** EST sequence 135 -strand 715 n (File: SGN-E334152-) 1 TGATCATTTC ACCCAAAGTT GTTGACCATG GAAAGAGCAT TGCTACTCAG CTCCCCGGGT 61 GGTACTCATT AGCTTCATCA TTTCGTCACG GGTTGCACTG TATTCTGATT TGGTGAAACC 121 ATCTAAACAA GTCTCTTCAT AAGCAACGAC AGCGCTAAGC CATGACTTGA GGTCATCCAC 181 TATATCCTTC ATCTTTGAGA AATCAAAGTT CTCAATCCTA GCGATAGAGC CCCTTAGTTC 241 CTCAACGGCT AGATCAAACA CCTCTTCACA AGCAAGGAGA GCGTCTTTGG TGTAAGGATC 301 ACTGGCAGCT TTCTTAACTG GCTCAGTGTT CTTGATGGCA TTCTTGATGT CTGCCACAGT 361 GGCTTCGAAT GCAACCTTGA TGTAGTCCTT TGGATCGGAC ACATTCTTTG CTGCGGAGAG 421 GGTCTTTTCA CAAGTTTGTT TGTATGGTGT GGGTTGACAC ATAGATTCAA CTGACTTTGT 481 TGAAGTTGCA ACTCCATTTG ATGATGTATC AGAATCATGT TTAGTCAGGG TGACACAGGC 541 TGCCACCACA CAAGCCACCA CAAGAACAGA AGCTATTCCA CCAATTACCA CCTTCTTTGT 601 CATTTTTTTG GTTTTTTGAT TTTTTTGGAT TTTTTTTATG GGGGGAGTTC CCTATGAAAC 661 AACCCCTATG GTTCTTCTTG TAAGTGAAGA ACTCAGAGGG GTTTTATTGA AGGCT Predicted gene structure (within gDNA segment 73980 to 67509): Exon 1 70821 70587 ( 235 n); cDNA 1 239 ( 239 n); score: 0.800 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 240 269 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E334152- 0.800 266 0.372 C PGS_C01HBa0163B20.1-_SGN-E334152- (70821 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): TGATCGTTTC ACCGAAAACT GTTGGCCATG GAAAGAGCAT TGATACTCAG CT---C-TTT 70766 ||||| |||| ||| ||| | |||| ||||| |||||||||| || ||||||| || | | TGATCATTTC ACCCAAAGTT GTTGACCATG GAAAGAGCAT TGCTACTCAG CTCCCCGGGT 60 CGTATTCAAT ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC 70706 ||| ||| | | |||||||| ||| || | ||||||||| | |||||||| || | ||||| GGTACTCATT AGCTTCATCA TTTCGTCACG GGTTGCACTG TATTCTGATT TGGTGAAACC 120 ATCTGAGCAA GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC 70646 |||| | ||| |||||||||| | |||| || || ||||||| |||| ||||| |||| ||||| ATCTAAACAA GTCTCTTCAT AAGCAACGAC AGCGCTAAGC CATGACTTGA GGTCATCCAC 180 CACATCCTTG ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC GTCTTTGGTG 70586 | |||||| ||||| |||| |||||||||| ||||||| || |||||||||| ||| | | TATATCCTTC ATCTTTGAGA AATCAAAGTT CTCAATCCTA GCGATAGAGC CCCTTAGTT. 239 TAAGGATCAC TGGCAGCTTT CTTAATCGGC TCGGTGTTTT TTGAGGTCAT TCTTGATGTC 70526 .......... .......... .......... .......... .......... .......... 239 TGACACAGGC TGGCACCACA AGAACAGAAG CTATTCCACC GATTACCACC TTCTTTGCAA 70466 .......... .......... .......... .......... .......... .......... 239 TTTTATCAAA TCACATGTTA AGCCAATCAT AGTTTTGAAA AAGGCATGAA GTTTTGACCA 70406 .......... .......... .......... .......... .......... .......... 239 TTAGTTTTAA ATGTGTGTGT TTTGGGAAAA AATAATCATA TGATAATTTG TTACAGCCGT 70346 .......... .......... .......... .......... .......... .......... 239 TTTCAAAACT AAAGGTCAAA AACTTCATGC CTTCGAGAAA ATTTTATTTA TTTTTGTAAA 70286 .......... .......... .......... .......... .......... .......... 239 ATAATAGTTG AGTTGTCACT TGATTTTTGG AAAATTAAGA AAACCATTTA AAAAGATAAT 70226 .......... .......... .......... .......... .......... .......... 239 TTTGAAATTT TTTCAATGAA CTTAATTTTA AGGGTTCAAG CGATCCTCTC AGAAAAGTTA 70166 .......... .......... .......... .......... .......... .......... 239 TATGTGGTTG ACCAACGAAT TAAATATGTC AATAATGAAA ATATTTAAGA ATTATTCGTG 70106 .......... .......... .......... .......... .......... .......... 239 AAAAGAACTT ATTTAAAAAT GAACAGAAAT TATTTGATAC ATAAACATTC ATACTATTTC 70046 .......... .......... .......... .......... .......... .......... 239 AAGAAATGAA ATAATTCTAA TGTGGAAGTT TCAGAAATAA TTCTAGCTTA ACAATTTATT 69986 .......... .......... .......... .......... .......... .......... 239 CGAATCAAAA TTTTCAAATA AGCGAGTAGC TCAAACGCTT AAATATGAAT ATGTATTATT 69926 .......... .......... .......... .......... .......... .......... 239 TGATAACTAT GAAAGAATAT GAAAAATATT TTAACTTATC CTGACAAGCC TGGATTTGCC 69866 .......... .......... .......... .......... .......... .......... 239 CAAAAGACAA GTTAGTTCAC TTAGCATTTG TGAAAAAGAT ACATTTTTTT ATTTAAGTCA 69806 .......... .......... .......... .......... .......... .......... 239 ATTGCACAAA CCTTGTATTG TTTGTAATCA TGGAAGGATT TGACATTTAT CCCTACCTTG 69746 .......... .......... .......... .......... .......... .......... 239 TTAATAGAAC TTCAAAATAT ACATGAGAGG TGGGCTACAC CACGTCTCCC CGGTTACATG 69686 .......... .......... .......... .......... .......... .......... 239 TCAAAAGATA TTTCTAAGAC TTCGGTTGAA CACTTCCTTA GAGAGAACAC TATTAATTAA 69626 .......... .......... .......... .......... .......... .......... 239 AGACACTCTA ATTAGTGAAA TAAAGGTATC AATTCAAACT CTTAATTTCT CGTTGAGGAT 69566 .......... .......... .......... .......... .......... .......... 239 TCAATAACAA ATCCACTAAA ATATCATTAG GTAGTGTATG AGAAGGGTAC AGTGTATGCA 69506 .......... .......... .......... .......... .......... .......... 239 GAACATATTA CTATCTCAAC GAGATAGAGA GACTTCTTCT GAAAGACTCT CGATTCAAGT 69446 .......... .......... .......... .......... .......... .......... 239 TTATCAAAAC CAAGTAATTA TATAAGAAAA TAACAATGAA AAAAGCATAG TCATTAATTA 69386 .......... .......... .......... .......... .......... .......... 239 ATAAGAAAAA CAGTGCAAAG TCTACACGAA AAAAACACTA ACAAGAGTAA AATATTGTAA 69326 .......... .......... .......... .......... .......... .......... 239 TCAAACACAT TAACAACATA TGGCAGGAAC TACAAGGGTA CAACAATTAC TATGACAGAC 69266 .......... .......... .......... .......... .......... .......... 239 AAACAAACAA GCCTAAACCT TCGCAAGGCA ACACACCCTC CATCCCTTCT ATCCCTCTAC 69206 .......... .......... .......... .......... .......... .......... 239 CTTAATCAAG GATCTATACT CCTTCCTATC TAGAGTCGTG ACCTCGATAA CATGAAGTTG 69146 .......... .......... .......... .......... .......... .......... 239 TGTCATATAT TGTATAATCA CCTTTTTCTC AATACTTCTT TGGCCTACAT ATATCCTTTG 69086 .......... .......... .......... .......... .......... .......... 239 TGAATCCCCA ACAACTAGAT TCTCACTCCT CCTCAC 69050 || || || ||||| || || ||| | |||| .....CCTCA ACGGCTAGA- TCAAACACCT CTTCAC 269 hqPGS_C01HBa0163B20.1-_SGN-E334152- (70821 70587,69080 69050) ******************************************************************************** EST sequence 161 -strand 712 n (File: SGN-E334584-) 1 TGATCATTTC ACCAAAGTGT TTGACCATGG AAAGAGCATT GCTACTCAGC TCCCGGGTGT 61 ACTCATTAGC TTCATCATTT CGTCACGGGT TGCACTGTAT TCTGATTTGG TGAAACCATC 121 TAAACAAGTC TCTTCATAAG CAACGACAGC GCTAAGCCAT GACTTGAGGT CATCCACTAT 181 ATCCTTCATC TTTGAGAAAT CAAAGTTCTC AATCCTAGCG ATAGAGCCCC TTAGTTCCTC 241 AACGGCTAGA TCAAACACCT CTTCACAAGC AAGGAGAGCG TCTTTGGTGT AAGGATCACT 301 GGCAGCTTTC TTAACTGGCT CAGTGTTCTT GATGGCATTC TTGATGTCTG CCACAGTGGC 361 TTCGAATGCA ACCTTGATGT AGTCCTTTGG ATCGGACACA TTCTTTGCTG CGGAGAGGGT 421 CTTTTCACAA GTTTGTTTGT ATGGTGTGGG TTGACACATA GATTCAACTG ACTTTGTTGA 481 AGTTGCAACT CCATTTGATG ATGTATCAGA ATCATGTTTA GTCAGGGTGA CACAGGCTGC 541 CACCACACAA GCCACCACAA GAACAGAAGC TATTCCACCA ATTACCACCT TCTTTGTCAT 601 TTTTTTGGTT TTTTGATTTT TTTGGATTTT TTTTATGGGG GGAGTTCCCT ATGAAACAAC 661 CCCTATGGTT CTTCTTGTAA GTGAAGAACT CAGAGGGGTT TTATTGAAGG CT Predicted gene structure (within gDNA segment 73950 to 67509): Exon 1 70821 70587 ( 235 n); cDNA 1 236 ( 236 n); score: 0.809 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 237 266 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E334584- 0.809 266 0.374 C PGS_C01HBa0163B20.1-_SGN-E334584- (70821 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): TGATCGTTTC ACCGAAAACT GTTGGCCATG GAAAGAGCAT TGATACTCAG CT--CTTTCG 70764 ||||| |||| ||| || | ||| ||||| |||||||||| || ||||||| || | | TGATCATTTC ACCAAAGTGT -TTGACCATG GAAAGAGCAT TGCTACTCAG CTCCCGGGTG 59 TATTCAATAT CTTCATCATT TTGTTGTGGG TTGCACTCTG TTCTGATTTG ATAAAACCAT 70704 || ||| || |||||||||| | || ||| ||||||| | |||||||||| | ||||||| TACTCATTAG CTTCATCATT TCGTCACGGG TTGCACTGTA TTCTGATTTG GTGAAACCAT 119 CTGAGCAAGT CTCTTCATAG GCAATCACAG TGCTAAGCCA TGTCTTGAGG TCTTCCACCA 70644 || | ||||| ||||||||| |||| |||| ||||||||| || ||||||| || ||||| | CTAAACAAGT CTCTTCATAA GCAACGACAG CGCTAAGCCA TGACTTGAGG TCATCCACTA 179 CATCCTTGAT CTTAGAGAAA TCAAAGTTCT CAATCTTAGC GATAGAGCGT CTTTGGTGTA 70584 |||||| || ||| |||||| |||||||||| ||||| |||| |||||||| ||| | | TATCCTTCAT CTTTGAGAAA TCAAAGTTCT CAATCCTAGC GATAGAGCCC CTTAGTT... 236 AGGATCACTG GCAGCTTTCT TAATCGGCTC GGTGTTTTTT GAGGTCATTC TTGATGTCTG 70524 .......... .......... .......... .......... .......... .......... 236 ACACAGGCTG GCACCACAAG AACAGAAGCT ATTCCACCGA TTACCACCTT CTTTGCAATT 70464 .......... .......... .......... .......... .......... .......... 236 TTATCAAATC ACATGTTAAG CCAATCATAG TTTTGAAAAA GGCATGAAGT TTTGACCATT 70404 .......... .......... .......... .......... .......... .......... 236 AGTTTTAAAT GTGTGTGTTT TGGGAAAAAA TAATCATATG ATAATTTGTT ACAGCCGTTT 70344 .......... .......... .......... .......... .......... .......... 236 TCAAAACTAA AGGTCAAAAA CTTCATGCCT TCGAGAAAAT TTTATTTATT TTTGTAAAAT 70284 .......... .......... .......... .......... .......... .......... 236 AATAGTTGAG TTGTCACTTG ATTTTTGGAA AATTAAGAAA ACCATTTAAA AAGATAATTT 70224 .......... .......... .......... .......... .......... .......... 236 TGAAATTTTT TCAATGAACT TAATTTTAAG GGTTCAAGCG ATCCTCTCAG AAAAGTTATA 70164 .......... .......... .......... .......... .......... .......... 236 TGTGGTTGAC CAACGAATTA AATATGTCAA TAATGAAAAT ATTTAAGAAT TATTCGTGAA 70104 .......... .......... .......... .......... .......... .......... 236 AAGAACTTAT TTAAAAATGA ACAGAAATTA TTTGATACAT AAACATTCAT ACTATTTCAA 70044 .......... .......... .......... .......... .......... .......... 236 GAAATGAAAT AATTCTAATG TGGAAGTTTC AGAAATAATT CTAGCTTAAC AATTTATTCG 69984 .......... .......... .......... .......... .......... .......... 236 AATCAAAATT TTCAAATAAG CGAGTAGCTC AAACGCTTAA ATATGAATAT GTATTATTTG 69924 .......... .......... .......... .......... .......... .......... 236 ATAACTATGA AAGAATATGA AAAATATTTT AACTTATCCT GACAAGCCTG GATTTGCCCA 69864 .......... .......... .......... .......... .......... .......... 236 AAAGACAAGT TAGTTCACTT AGCATTTGTG AAAAAGATAC ATTTTTTTAT TTAAGTCAAT 69804 .......... .......... .......... .......... .......... .......... 236 TGCACAAACC TTGTATTGTT TGTAATCATG GAAGGATTTG ACATTTATCC CTACCTTGTT 69744 .......... .......... .......... .......... .......... .......... 236 AATAGAACTT CAAAATATAC ATGAGAGGTG GGCTACACCA CGTCTCCCCG GTTACATGTC 69684 .......... .......... .......... .......... .......... .......... 236 AAAAGATATT TCTAAGACTT CGGTTGAACA CTTCCTTAGA GAGAACACTA TTAATTAAAG 69624 .......... .......... .......... .......... .......... .......... 236 ACACTCTAAT TAGTGAAATA AAGGTATCAA TTCAAACTCT TAATTTCTCG TTGAGGATTC 69564 .......... .......... .......... .......... .......... .......... 236 AATAACAAAT CCACTAAAAT ATCATTAGGT AGTGTATGAG AAGGGTACAG TGTATGCAGA 69504 .......... .......... .......... .......... .......... .......... 236 ACATATTACT ATCTCAACGA GATAGAGAGA CTTCTTCTGA AAGACTCTCG ATTCAAGTTT 69444 .......... .......... .......... .......... .......... .......... 236 ATCAAAACCA AGTAATTATA TAAGAAAATA ACAATGAAAA AAGCATAGTC ATTAATTAAT 69384 .......... .......... .......... .......... .......... .......... 236 AAGAAAAACA GTGCAAAGTC TACACGAAAA AAACACTAAC AAGAGTAAAA TATTGTAATC 69324 .......... .......... .......... .......... .......... .......... 236 AAACACATTA ACAACATATG GCAGGAACTA CAAGGGTACA ACAATTACTA TGACAGACAA 69264 .......... .......... .......... .......... .......... .......... 236 ACAAACAAGC CTAAACCTTC GCAAGGCAAC ACACCCTCCA TCCCTTCTAT CCCTCTACCT 69204 .......... .......... .......... .......... .......... .......... 236 TAATCAAGGA TCTATACTCC TTCCTATCTA GAGTCGTGAC CTCGATAACA TGAAGTTGTG 69144 .......... .......... .......... .......... .......... .......... 236 TCATATATTG TATAATCACC TTTTTCTCAA TACTTCTTTG GCCTACATAT ATCCTTTGTG 69084 .......... .......... .......... .......... .......... .......... 236 AATCCCCAAC AACTAGATTC TCACTCCTCC TCAC 69050 || |||| ||||| || || |||| |||| ...CCTCAAC GGCTAGA-TC AAACACCTCT TCAC 266 hqPGS_C01HBa0163B20.1-_SGN-E334584- (70821 70587,69080 69050) ******************************************************************************** EST sequence 56 -strand 691 n (File: SGN-E332090-) 1 ACCATGGAAA GAGCATTGCT ACTCAGCTCC CGGGTGGTAC TCATTAGCTT CATCATTTCG 61 TCACGGGTTG CACTGTATTC TGATTTGGTG AAACCATCTA AACAAGTCTC TTCATAAGCA 121 ACGACAGCGC TAAGCCATGA CTTGAGGTCA TCCACTATAT CCTTCATCTT TGAGAAATCA 181 AAGTTCTCAA TCCTAGCGAT AGAGCCCCTT AGTTCCTCAA CGGCTAGATC AAACACCTCT 241 TCACAAGCAA GGAGAGCGTC TTTGGTGTAA GGATCACTGG CAGCTTTCTT AACTGGCTCA 301 GTGTTCTTGA TGGCATTCTT GATGTCTGCC ACAGTGGCTT CGAATGCAAC CTTGATGTAG 361 TCCTTTGGAT CGGACACATT CTTTGCTGCG GAGAGGGTCT TTTCACAAGT TTGTTTGTAT 421 GGTGTGGGTT GACACATAGA TTCAACTGAC TTTGTTGAAG TTGCAACTCC ATTTGATGAT 481 GTATCAGAAT CATGTTTAGT CAGGGTGACA CAGGCTGCCA CCACACAAGC CACCACAAGA 541 ACAGAAGCTA TTCCACCAAT TACCACCTTC TTTGTCATTT TTTTGGTTTT TTGATTTTTT 601 TGGATTTTTT TTATGGGGGG AGTTCCCTAT GAAACAACCC CTATGGTTCT TCTTGTAAGT 661 GAAGAACTCA GAGGGGTTTT ATTGAAGGCT G Predicted gene structure (within gDNA segment 73730 to 67499): Exon 1 70796 70587 ( 210 n); cDNA 2 214 ( 213 n); score: 0.812 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 215 244 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E332090- 0.812 241 0.349 C PGS_C01HBa0163B20.1-_SGN-E332090- (70796 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): CCATGGAAAG AGCATTGATA CTCAGCT--C TT-TCGTATT CAATATCTTC ATCATTTTGT 70740 |||||||||| ||||||| || ||||||| | | ||| | || || |||| ||||||| || CCATGGAAAG AGCATTGCTA CTCAGCTCCC GGGTGGTACT CATTAGCTTC ATCATTTCGT 61 TGTGGGTTGC ACTCTGTTCT GATTTGATAA AACCATCTGA GCAAGTCTCT TCATAGGCAA 70680 ||||||| ||| | |||| |||||| | | |||||||| | ||||||||| ||||| |||| CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA ACAAGTCTCT TCATAAGCAA 121 TCACAGTGCT AAGCCATGTC TTGAGGTCTT CCACCACATC CTTGATCTTA GAGAAATCAA 70620 |||| ||| |||||||| | |||||||| | |||| | ||| ||| ||||| |||||||||| CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC CTTCATCTTT GAGAAATCAA 181 AGTTCTCAAT CTTAGCGATA GAGCGTCTTT GGTGTAAGGA TCACTGGCAG CTTTCTTAAT 70560 |||||||||| | |||||||| |||| ||| | | AGTTCTCAAT CCTAGCGATA GAGCCCCTTA GTT....... .......... .......... 214 CGGCTCGGTG TTTTTTGAGG TCATTCTTGA TGTCTGACAC AGGCTGGCAC CACAAGAACA 70500 .......... .......... .......... .......... .......... .......... 214 GAAGCTATTC CACCGATTAC CACCTTCTTT GCAATTTTAT CAAATCACAT GTTAAGCCAA 70440 .......... .......... .......... .......... .......... .......... 214 TCATAGTTTT GAAAAAGGCA TGAAGTTTTG ACCATTAGTT TTAAATGTGT GTGTTTTGGG 70380 .......... .......... .......... .......... .......... .......... 214 AAAAAATAAT CATATGATAA TTTGTTACAG CCGTTTTCAA AACTAAAGGT CAAAAACTTC 70320 .......... .......... .......... .......... .......... .......... 214 ATGCCTTCGA GAAAATTTTA TTTATTTTTG TAAAATAATA GTTGAGTTGT CACTTGATTT 70260 .......... .......... .......... .......... .......... .......... 214 TTGGAAAATT AAGAAAACCA TTTAAAAAGA TAATTTTGAA ATTTTTTCAA TGAACTTAAT 70200 .......... .......... .......... .......... .......... .......... 214 TTTAAGGGTT CAAGCGATCC TCTCAGAAAA GTTATATGTG GTTGACCAAC GAATTAAATA 70140 .......... .......... .......... .......... .......... .......... 214 TGTCAATAAT GAAAATATTT AAGAATTATT CGTGAAAAGA ACTTATTTAA AAATGAACAG 70080 .......... .......... .......... .......... .......... .......... 214 AAATTATTTG ATACATAAAC ATTCATACTA TTTCAAGAAA TGAAATAATT CTAATGTGGA 70020 .......... .......... .......... .......... .......... .......... 214 AGTTTCAGAA ATAATTCTAG CTTAACAATT TATTCGAATC AAAATTTTCA AATAAGCGAG 69960 .......... .......... .......... .......... .......... .......... 214 TAGCTCAAAC GCTTAAATAT GAATATGTAT TATTTGATAA CTATGAAAGA ATATGAAAAA 69900 .......... .......... .......... .......... .......... .......... 214 TATTTTAACT TATCCTGACA AGCCTGGATT TGCCCAAAAG ACAAGTTAGT TCACTTAGCA 69840 .......... .......... .......... .......... .......... .......... 214 TTTGTGAAAA AGATACATTT TTTTATTTAA GTCAATTGCA CAAACCTTGT ATTGTTTGTA 69780 .......... .......... .......... .......... .......... .......... 214 ATCATGGAAG GATTTGACAT TTATCCCTAC CTTGTTAATA GAACTTCAAA ATATACATGA 69720 .......... .......... .......... .......... .......... .......... 214 GAGGTGGGCT ACACCACGTC TCCCCGGTTA CATGTCAAAA GATATTTCTA AGACTTCGGT 69660 .......... .......... .......... .......... .......... .......... 214 TGAACACTTC CTTAGAGAGA ACACTATTAA TTAAAGACAC TCTAATTAGT GAAATAAAGG 69600 .......... .......... .......... .......... .......... .......... 214 TATCAATTCA AACTCTTAAT TTCTCGTTGA GGATTCAATA ACAAATCCAC TAAAATATCA 69540 .......... .......... .......... .......... .......... .......... 214 TTAGGTAGTG TATGAGAAGG GTACAGTGTA TGCAGAACAT ATTACTATCT CAACGAGATA 69480 .......... .......... .......... .......... .......... .......... 214 GAGAGACTTC TTCTGAAAGA CTCTCGATTC AAGTTTATCA AAACCAAGTA ATTATATAAG 69420 .......... .......... .......... .......... .......... .......... 214 AAAATAACAA TGAAAAAAGC ATAGTCATTA ATTAATAAGA AAAACAGTGC AAAGTCTACA 69360 .......... .......... .......... .......... .......... .......... 214 CGAAAAAAAC ACTAACAAGA GTAAAATATT GTAATCAAAC ACATTAACAA CATATGGCAG 69300 .......... .......... .......... .......... .......... .......... 214 GAACTACAAG GGTACAACAA TTACTATGAC AGACAAACAA ACAAGCCTAA ACCTTCGCAA 69240 .......... .......... .......... .......... .......... .......... 214 GGCAACACAC CCTCCATCCC TTCTATCCCT CTACCTTAAT CAAGGATCTA TACTCCTTCC 69180 .......... .......... .......... .......... .......... .......... 214 TATCTAGAGT CGTGACCTCG ATAACATGAA GTTGTGTCAT ATATTGTATA ATCACCTTTT 69120 .......... .......... .......... .......... .......... .......... 214 TCTCAATACT TCTTTGGCCT ACATATATCC TTTGTGAATC CCCAACAACT AGATTCTCAC 69060 | | |||| || ||| || || .......... .......... .......... .........C CTCAACGGCT AGA-TCAAAC 234 TCCTCCTCAC 69050 |||| |||| ACCTCTTCAC 244 hqPGS_C01HBa0163B20.1-_SGN-E332090- (70796 70587,69080 69050) ******************************************************************************** EST sequence 65 -strand 677 n (File: SGN-E332023-) 1 CATTGCTACT CAGCTCCCGG GTGGTACTCA TTAGCTTCAT CATTTCGTCA CGGGTTGCAC 61 TGTATTCTGA TTTGGTGAAA CCATCTAAAC AAGTCTCTTC ATAAGCAACG ACAGCGCTAA 121 GCCATGACTT GAGGTCATCC ACTATATCCT TCATCTTTGA GAAATCAAAG TTCTCAATCC 181 TAGCGATAGA GCCCCTTAGT TCCTCAACGG CTAGATCAAA CACCTCTTCA CAAGCAAGGA 241 GAGCGTCTTT GGTGTAAGGA TCACTGGCAG CTTTCTTAAC TGGCTCAGTG TTCTTGATGG 301 CATTCTTGAT GTCTGCCACA GTGGCTTCGA ATGCAACCTT GATGTAGTCC TTTGGATCGG 361 ACACATTCTT TGCTGCGGAG AGGGTCTTTT CACAAGTTTG TTTGTATGGT GTGGGTTGAC 421 ACATAGATTC AACTGACTTT GTTGAAGTTG CAACTCCATT TGATGATGTA TCAGAATCAT 481 GTTTAGTCAG GGTGACACAG GCTGCCACCA CACAAGCCAC CACAAGAACA GAAGCTATTC 541 CACCAATTAC CACCTTCTTT GTCATTTTTT TGGTTTTTTG ATTTTTTTGG ATTTTTTTTA 601 TGGGGGGAGT TCCCTATGAA ACAACCCCTA TGGTTCTTCT TGTAAGTGAA GAACTCAGAG 661 GGGTTTTATT GAAGGCT Predicted gene structure (within gDNA segment 73600 to 67509): Exon 1 70784 70587 ( 198 n); cDNA 1 201 ( 201 n); score: 0.801 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 202 231 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E332023- 0.801 229 0.338 C PGS_C01HBa0163B20.1-_SGN-E332023- (70784 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): CATTGATACT CAGCT--C-T TTCGTATTCA ATATCTTCAT CATTTTGTTG TGGGTTGCAC 70728 ||||| |||| ||||| | | ||| ||| || |||||| ||||| || ||||||||| CATTGCTACT CAGCTCCCGG GTGGTACTCA TTAGCTTCAT CATTTCGTCA CGGGTTGCAC 60 TCTGTTCTGA TTTGATAAAA CCATCTGAGC AAGTCTCTTC ATAGGCAATC ACAGTGCTAA 70668 | | |||||| |||| | ||| |||||| | | |||||||||| ||| |||| |||| ||||| TGTATTCTGA TTTGGTGAAA CCATCTAAAC AAGTCTCTTC ATAAGCAACG ACAGCGCTAA 120 GCCATGTCTT GAGGTCTTCC ACCACATCCT TGATCTTAGA GAAATCAAAG TTCTCAATCT 70608 |||||| ||| |||||| ||| || | ||||| | ||||| || |||||||||| ||||||||| GCCATGACTT GAGGTCATCC ACTATATCCT TCATCTTTGA GAAATCAAAG TTCTCAATCC 180 TAGCGATAGA GCGTCTTTGG TGTAAGGATC ACTGGCAGCT TTCTTAATCG GCTCGGTGTT 70548 |||||||||| || ||| | | TAGCGATAGA GCCCCTTAGT T......... .......... .......... .......... 201 TTTTGAGGTC ATTCTTGATG TCTGACACAG GCTGGCACCA CAAGAACAGA AGCTATTCCA 70488 .......... .......... .......... .......... .......... .......... 201 CCGATTACCA CCTTCTTTGC AATTTTATCA AATCACATGT TAAGCCAATC ATAGTTTTGA 70428 .......... .......... .......... .......... .......... .......... 201 AAAAGGCATG AAGTTTTGAC CATTAGTTTT AAATGTGTGT GTTTTGGGAA AAAATAATCA 70368 .......... .......... .......... .......... .......... .......... 201 TATGATAATT TGTTACAGCC GTTTTCAAAA CTAAAGGTCA AAAACTTCAT GCCTTCGAGA 70308 .......... .......... .......... .......... .......... .......... 201 AAATTTTATT TATTTTTGTA AAATAATAGT TGAGTTGTCA CTTGATTTTT GGAAAATTAA 70248 .......... .......... .......... .......... .......... .......... 201 GAAAACCATT TAAAAAGATA ATTTTGAAAT TTTTTCAATG AACTTAATTT TAAGGGTTCA 70188 .......... .......... .......... .......... .......... .......... 201 AGCGATCCTC TCAGAAAAGT TATATGTGGT TGACCAACGA ATTAAATATG TCAATAATGA 70128 .......... .......... .......... .......... .......... .......... 201 AAATATTTAA GAATTATTCG TGAAAAGAAC TTATTTAAAA ATGAACAGAA ATTATTTGAT 70068 .......... .......... .......... .......... .......... .......... 201 ACATAAACAT TCATACTATT TCAAGAAATG AAATAATTCT AATGTGGAAG TTTCAGAAAT 70008 .......... .......... .......... .......... .......... .......... 201 AATTCTAGCT TAACAATTTA TTCGAATCAA AATTTTCAAA TAAGCGAGTA GCTCAAACGC 69948 .......... .......... .......... .......... .......... .......... 201 TTAAATATGA ATATGTATTA TTTGATAACT ATGAAAGAAT ATGAAAAATA TTTTAACTTA 69888 .......... .......... .......... .......... .......... .......... 201 TCCTGACAAG CCTGGATTTG CCCAAAAGAC AAGTTAGTTC ACTTAGCATT TGTGAAAAAG 69828 .......... .......... .......... .......... .......... .......... 201 ATACATTTTT TTATTTAAGT CAATTGCACA AACCTTGTAT TGTTTGTAAT CATGGAAGGA 69768 .......... .......... .......... .......... .......... .......... 201 TTTGACATTT ATCCCTACCT TGTTAATAGA ACTTCAAAAT ATACATGAGA GGTGGGCTAC 69708 .......... .......... .......... .......... .......... .......... 201 ACCACGTCTC CCCGGTTACA TGTCAAAAGA TATTTCTAAG ACTTCGGTTG AACACTTCCT 69648 .......... .......... .......... .......... .......... .......... 201 TAGAGAGAAC ACTATTAATT AAAGACACTC TAATTAGTGA AATAAAGGTA TCAATTCAAA 69588 .......... .......... .......... .......... .......... .......... 201 CTCTTAATTT CTCGTTGAGG ATTCAATAAC AAATCCACTA AAATATCATT AGGTAGTGTA 69528 .......... .......... .......... .......... .......... .......... 201 TGAGAAGGGT ACAGTGTATG CAGAACATAT TACTATCTCA ACGAGATAGA GAGACTTCTT 69468 .......... .......... .......... .......... .......... .......... 201 CTGAAAGACT CTCGATTCAA GTTTATCAAA ACCAAGTAAT TATATAAGAA AATAACAATG 69408 .......... .......... .......... .......... .......... .......... 201 AAAAAAGCAT AGTCATTAAT TAATAAGAAA AACAGTGCAA AGTCTACACG AAAAAAACAC 69348 .......... .......... .......... .......... .......... .......... 201 TAACAAGAGT AAAATATTGT AATCAAACAC ATTAACAACA TATGGCAGGA ACTACAAGGG 69288 .......... .......... .......... .......... .......... .......... 201 TACAACAATT ACTATGACAG ACAAACAAAC AAGCCTAAAC CTTCGCAAGG CAACACACCC 69228 .......... .......... .......... .......... .......... .......... 201 TCCATCCCTT CTATCCCTCT ACCTTAATCA AGGATCTATA CTCCTTCCTA TCTAGAGTCG 69168 .......... .......... .......... .......... .......... .......... 201 TGACCTCGAT AACATGAAGT TGTGTCATAT ATTGTATAAT CACCTTTTTC TCAATACTTC 69108 .......... .......... .......... .......... .......... .......... 201 TTTGGCCTAC ATATATCCTT TGTGAATCCC CAACAACTAG ATTCTCACTC CTCCTCAC 69050 || |||| |||| | || || | ||| |||| .......... .......... .......CCT CAACGGCTAG A-TCAAACAC CTCTTCAC 231 hqPGS_C01HBa0163B20.1-_SGN-E332023- (70784 70587,69080 69050) ******************************************************************************** EST sequence 188 -strand 666 n (File: SGN-E330458-) 1 CAGCTCCCGG GTGGTACTCA TTAGCTTCAT CATTTCGTCA CGGGTTGCAC TGTATTCTGA 61 TTTGGTGAAA CCATCTAAAC AAGTCTCTTC ATAAGCAACG ACAGCGCTAA GCCATGACTT 121 GAGGTCATCC ACTATATCCT TCATCTTTGA GAAATCAAAG TTCTCAATCC TAGCGATAGA 181 GCCCCTTAGT TCCTCAACGG CTAGATCAAA CACCTCTTCA CAAGCAAGGA GAGCGTCTTT 241 GGTGTAAGGA TCACTGGCAG CTTTCTTAAC TGGCTCAGTG TTCTTGATGG CATTCTTGAT 301 GTCTGCCACA GTGGCTTCGA ATGCAACCTT GATGTAGTCC TTTGGATCGG ACACATTCTT 361 TGCTGCGGAG AGGGTCTTTT CACAAGTTTG TTTGTATGGT GTGGGTTGAC ACATAGATTC 421 AACTGACTTT GTTGAAGTTG CAACTCCATT TGATGATGTA TCAGAATCAT GTTTAGTCAG 481 GGTGACACAG GCTGCCACCA CACAAGCCAC CACAAGAACA GAAGCTATTC CACCAATTAC 541 CACCTTCTTT GTCATTTTTT TGGTTTTTTG ATTTTTTTGG ATTTTTTTTA TGGGGGGAGT 601 TCCCTATGAA ACAACCCCTA TGGTTCTTCT TGTAAGTGAA GAACTCAGAG GGGTTTTATT 661 GAAGGC Predicted gene structure (within gDNA segment 73500 to 67519): Exon 1 70764 70587 ( 178 n); cDNA 14 191 ( 178 n); score: 0.843 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 192 221 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E330458- 0.843 209 0.314 C PGS_C01HBa0163B20.1-_SGN-E330458- (70764 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): GTATTCAATA TCTTCATCAT TTTGTTGTGG GTTGCACTCT GTTCTGATTT GATAAAACCA 70705 ||| ||| || ||||||||| || || || |||||||| | ||||||||| | | |||||| GTACTCATTA GCTTCATCAT TTCGTCACGG GTTGCACTGT ATTCTGATTT GGTGAAACCA 73 TCTGAGCAAG TCTCTTCATA GGCAATCACA GTGCTAAGCC ATGTCTTGAG GTCTTCCACC 70645 ||| | |||| |||||||||| |||| ||| | |||||||| ||| |||||| ||| ||||| TCTAAACAAG TCTCTTCATA AGCAACGACA GCGCTAAGCC ATGACTTGAG GTCATCCACT 133 ACATCCTTGA TCTTAGAGAA ATCAAAGTTC TCAATCTTAG CGATAGAGCG TCTTTGGTGT 70585 | |||||| | |||| ||||| |||||||||| |||||| ||| ||||||||| ||| | | ATATCCTTCA TCTTTGAGAA ATCAAAGTTC TCAATCCTAG CGATAGAGCC CCTTAGTT.. 191 AAGGATCACT GGCAGCTTTC TTAATCGGCT CGGTGTTTTT TGAGGTCATT CTTGATGTCT 70525 .......... .......... .......... .......... .......... .......... 191 GACACAGGCT GGCACCACAA GAACAGAAGC TATTCCACCG ATTACCACCT TCTTTGCAAT 70465 .......... .......... .......... .......... .......... .......... 191 TTTATCAAAT CACATGTTAA GCCAATCATA GTTTTGAAAA AGGCATGAAG TTTTGACCAT 70405 .......... .......... .......... .......... .......... .......... 191 TAGTTTTAAA TGTGTGTGTT TTGGGAAAAA ATAATCATAT GATAATTTGT TACAGCCGTT 70345 .......... .......... .......... .......... .......... .......... 191 TTCAAAACTA AAGGTCAAAA ACTTCATGCC TTCGAGAAAA TTTTATTTAT TTTTGTAAAA 70285 .......... .......... .......... .......... .......... .......... 191 TAATAGTTGA GTTGTCACTT GATTTTTGGA AAATTAAGAA AACCATTTAA AAAGATAATT 70225 .......... .......... .......... .......... .......... .......... 191 TTGAAATTTT TTCAATGAAC TTAATTTTAA GGGTTCAAGC GATCCTCTCA GAAAAGTTAT 70165 .......... .......... .......... .......... .......... .......... 191 ATGTGGTTGA CCAACGAATT AAATATGTCA ATAATGAAAA TATTTAAGAA TTATTCGTGA 70105 .......... .......... .......... .......... .......... .......... 191 AAAGAACTTA TTTAAAAATG AACAGAAATT ATTTGATACA TAAACATTCA TACTATTTCA 70045 .......... .......... .......... .......... .......... .......... 191 AGAAATGAAA TAATTCTAAT GTGGAAGTTT CAGAAATAAT TCTAGCTTAA CAATTTATTC 69985 .......... .......... .......... .......... .......... .......... 191 GAATCAAAAT TTTCAAATAA GCGAGTAGCT CAAACGCTTA AATATGAATA TGTATTATTT 69925 .......... .......... .......... .......... .......... .......... 191 GATAACTATG AAAGAATATG AAAAATATTT TAACTTATCC TGACAAGCCT GGATTTGCCC 69865 .......... .......... .......... .......... .......... .......... 191 AAAAGACAAG TTAGTTCACT TAGCATTTGT GAAAAAGATA CATTTTTTTA TTTAAGTCAA 69805 .......... .......... .......... .......... .......... .......... 191 TTGCACAAAC CTTGTATTGT TTGTAATCAT GGAAGGATTT GACATTTATC CCTACCTTGT 69745 .......... .......... .......... .......... .......... .......... 191 TAATAGAACT TCAAAATATA CATGAGAGGT GGGCTACACC ACGTCTCCCC GGTTACATGT 69685 .......... .......... .......... .......... .......... .......... 191 CAAAAGATAT TTCTAAGACT TCGGTTGAAC ACTTCCTTAG AGAGAACACT ATTAATTAAA 69625 .......... .......... .......... .......... .......... .......... 191 GACACTCTAA TTAGTGAAAT AAAGGTATCA ATTCAAACTC TTAATTTCTC GTTGAGGATT 69565 .......... .......... .......... .......... .......... .......... 191 CAATAACAAA TCCACTAAAA TATCATTAGG TAGTGTATGA GAAGGGTACA GTGTATGCAG 69505 .......... .......... .......... .......... .......... .......... 191 AACATATTAC TATCTCAACG AGATAGAGAG ACTTCTTCTG AAAGACTCTC GATTCAAGTT 69445 .......... .......... .......... .......... .......... .......... 191 TATCAAAACC AAGTAATTAT ATAAGAAAAT AACAATGAAA AAAGCATAGT CATTAATTAA 69385 .......... .......... .......... .......... .......... .......... 191 TAAGAAAAAC AGTGCAAAGT CTACACGAAA AAAACACTAA CAAGAGTAAA ATATTGTAAT 69325 .......... .......... .......... .......... .......... .......... 191 CAAACACATT AACAACATAT GGCAGGAACT ACAAGGGTAC AACAATTACT ATGACAGACA 69265 .......... .......... .......... .......... .......... .......... 191 AACAAACAAG CCTAAACCTT CGCAAGGCAA CACACCCTCC ATCCCTTCTA TCCCTCTACC 69205 .......... .......... .......... .......... .......... .......... 191 TTAATCAAGG ATCTATACTC CTTCCTATCT AGAGTCGTGA CCTCGATAAC ATGAAGTTGT 69145 .......... .......... .......... .......... .......... .......... 191 GTCATATATT GTATAATCAC CTTTTTCTCA ATACTTCTTT GGCCTACATA TATCCTTTGT 69085 .......... .......... .......... .......... .......... .......... 191 GAATCCCCAA CAACTAGATT CTCACTCCTC CTCAC 69050 || ||| | ||||| | | || |||| |||| ....CCTCAA CGGCTAGA-T CAAACACCTC TTCAC 221 hqPGS_C01HBa0163B20.1-_SGN-E330458- (70764 70587,69080 69050) ******************************************************************************** EST sequence 79 -strand 652 n (File: SGN-E332231-) 1 CATTAGCTTC ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTGTGAA ACCATCTAAA 61 CAAGTCTCTT CATAAGCAAC GACAGCGCTA AGCCATGACT TGAGGTCATC CACTATATCC 121 TTCATCTTTG AGAAATCAAA GTTCTCAATC CTAGCGATAG AGCCCCTTAG TTCCTCAACG 181 GCTAGATCAA ACACCTCTTC ACAAGCAAGG AGAGCGTCTT TGGTGTAAGG ATCACTGGCA 241 GCTTTCTTAA CTGGCTCAGT GTTCTTGATG GCATTCTTGA TGTCTGCCAC AGTGGCTTCG 301 AATGCAACCT TGATGTAGTC CTTTGGATCG GACACATTCT TTGCTGCGGA GAGGGTCTTT 361 TCACAAGTTT GTTTGTATGG TGTGGGTTGA CACATAGATT CAACTGACTT TGTTGAAGTT 421 GCAACTCCAT TTGATGATGT ATCAGAATCA TGTTTAGTCA GGGTGACACA GGCTGCCACC 481 ACACAAGCCA CCACAAGAAC AGAAGCTATT CCACCAATTA CCACCTTCTT TGTCATTTTT 541 TTGGTTTTTT GATTTTTTTG GATTTTTTTT ATGGGGGGAG TTCCCTATGA AACAACCCCT 601 ATGGTTCTTC TTGTAAGTGA AGAACTCAGA GGGGTTTTAT TGAAGGCTGT GT Predicted gene structure (within gDNA segment 73310 to 67469): Exon 1 70759 70587 ( 173 n); cDNA 1 172 ( 172 n); score: 0.844 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 173 202 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E332231- 0.844 204 0.313 C PGS_C01HBa0163B20.1-_SGN-E332231- (70759 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): CAATATCTTC ATCATTTTGT TGTGGGTTGC ACTCTGTTCT GATTTGATAA AACCATCTGA 70700 || || |||| ||||||| || ||||||| ||| | |||| |||||| | | |||||||| | CATTAGCTTC ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTG-TGA AACCATCTAA 59 GCAAGTCTCT TCATAGGCAA TCACAGTGCT AAGCCATGTC TTGAGGTCTT CCACCACATC 70640 ||||||||| ||||| |||| |||| ||| |||||||| | |||||||| | |||| | ||| ACAAGTCTCT TCATAAGCAA CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC 119 CTTGATCTTA GAGAAATCAA AGTTCTCAAT CTTAGCGATA GAGCGTCTTT GGTGTAAGGA 70580 ||| ||||| |||||||||| |||||||||| | |||||||| |||| ||| | | CTTCATCTTT GAGAAATCAA AGTTCTCAAT CCTAGCGATA GAGCCCCTTA GTT....... 172 TCACTGGCAG CTTTCTTAAT CGGCTCGGTG TTTTTTGAGG TCATTCTTGA TGTCTGACAC 70520 .......... .......... .......... .......... .......... .......... 172 AGGCTGGCAC CACAAGAACA GAAGCTATTC CACCGATTAC CACCTTCTTT GCAATTTTAT 70460 .......... .......... .......... .......... .......... .......... 172 CAAATCACAT GTTAAGCCAA TCATAGTTTT GAAAAAGGCA TGAAGTTTTG ACCATTAGTT 70400 .......... .......... .......... .......... .......... .......... 172 TTAAATGTGT GTGTTTTGGG AAAAAATAAT CATATGATAA TTTGTTACAG CCGTTTTCAA 70340 .......... .......... .......... .......... .......... .......... 172 AACTAAAGGT CAAAAACTTC ATGCCTTCGA GAAAATTTTA TTTATTTTTG TAAAATAATA 70280 .......... .......... .......... .......... .......... .......... 172 GTTGAGTTGT CACTTGATTT TTGGAAAATT AAGAAAACCA TTTAAAAAGA TAATTTTGAA 70220 .......... .......... .......... .......... .......... .......... 172 ATTTTTTCAA TGAACTTAAT TTTAAGGGTT CAAGCGATCC TCTCAGAAAA GTTATATGTG 70160 .......... .......... .......... .......... .......... .......... 172 GTTGACCAAC GAATTAAATA TGTCAATAAT GAAAATATTT AAGAATTATT CGTGAAAAGA 70100 .......... .......... .......... .......... .......... .......... 172 ACTTATTTAA AAATGAACAG AAATTATTTG ATACATAAAC ATTCATACTA TTTCAAGAAA 70040 .......... .......... .......... .......... .......... .......... 172 TGAAATAATT CTAATGTGGA AGTTTCAGAA ATAATTCTAG CTTAACAATT TATTCGAATC 69980 .......... .......... .......... .......... .......... .......... 172 AAAATTTTCA AATAAGCGAG TAGCTCAAAC GCTTAAATAT GAATATGTAT TATTTGATAA 69920 .......... .......... .......... .......... .......... .......... 172 CTATGAAAGA ATATGAAAAA TATTTTAACT TATCCTGACA AGCCTGGATT TGCCCAAAAG 69860 .......... .......... .......... .......... .......... .......... 172 ACAAGTTAGT TCACTTAGCA TTTGTGAAAA AGATACATTT TTTTATTTAA GTCAATTGCA 69800 .......... .......... .......... .......... .......... .......... 172 CAAACCTTGT ATTGTTTGTA ATCATGGAAG GATTTGACAT TTATCCCTAC CTTGTTAATA 69740 .......... .......... .......... .......... .......... .......... 172 GAACTTCAAA ATATACATGA GAGGTGGGCT ACACCACGTC TCCCCGGTTA CATGTCAAAA 69680 .......... .......... .......... .......... .......... .......... 172 GATATTTCTA AGACTTCGGT TGAACACTTC CTTAGAGAGA ACACTATTAA TTAAAGACAC 69620 .......... .......... .......... .......... .......... .......... 172 TCTAATTAGT GAAATAAAGG TATCAATTCA AACTCTTAAT TTCTCGTTGA GGATTCAATA 69560 .......... .......... .......... .......... .......... .......... 172 ACAAATCCAC TAAAATATCA TTAGGTAGTG TATGAGAAGG GTACAGTGTA TGCAGAACAT 69500 .......... .......... .......... .......... .......... .......... 172 ATTACTATCT CAACGAGATA GAGAGACTTC TTCTGAAAGA CTCTCGATTC AAGTTTATCA 69440 .......... .......... .......... .......... .......... .......... 172 AAACCAAGTA ATTATATAAG AAAATAACAA TGAAAAAAGC ATAGTCATTA ATTAATAAGA 69380 .......... .......... .......... .......... .......... .......... 172 AAAACAGTGC AAAGTCTACA CGAAAAAAAC ACTAACAAGA GTAAAATATT GTAATCAAAC 69320 .......... .......... .......... .......... .......... .......... 172 ACATTAACAA CATATGGCAG GAACTACAAG GGTACAACAA TTACTATGAC AGACAAACAA 69260 .......... .......... .......... .......... .......... .......... 172 ACAAGCCTAA ACCTTCGCAA GGCAACACAC CCTCCATCCC TTCTATCCCT CTACCTTAAT 69200 .......... .......... .......... .......... .......... .......... 172 CAAGGATCTA TACTCCTTCC TATCTAGAGT CGTGACCTCG ATAACATGAA GTTGTGTCAT 69140 .......... .......... .......... .......... .......... .......... 172 ATATTGTATA ATCACCTTTT TCTCAATACT TCTTTGGCCT ACATATATCC TTTGTGAATC 69080 | .......... .......... .......... .......... .......... .........C 173 CCCAACAACT AGATTCTCAC TCCTCCTCAC 69050 | |||| || ||| || || |||| |||| CTCAACGGCT AGA-TCAAAC ACCTCTTCAC 202 hqPGS_C01HBa0163B20.1-_SGN-E332231- (70759 70587,69080 69050) ******************************************************************************** EST sequence 196 -strand 640 n (File: SGN-E330049-) 1 TTCATCATTT CGTCACGGGT TGCACTGTAT TCTGATTTGG TGAAACCATC TAAACAAGTC 61 TCTTCATAAG CAACGACAGC GCTAAGCCAT GACTTGAGGT CATCCACTAT ATCCTTCATC 121 TTTGAGAAAT CAAAGTTCTC AATCCTAGCG ATAGAGCCCC TTAGTTCCTC AACGGCTAGA 181 TCAAACACCT CTTCACAAGC AAGGAGAGCG TCTTTGGTGT AAGGATCACT GGCAGCTTTC 241 TTAACTGGCT CAGTGTTCTT GATGGCATTC TTGATGTCTG CCACAGTGGC TTCGAATGCA 301 ACCTTGATGT AGTCCTTTGG ATCGGACACA TTCTTTGCTG CGGAGAGGGT CTTTTCACAA 361 GTTTGTTTGT ATGGTGTGGG TTGACACATA GATTCAACTG ACTTTGTTGA AGTTGCAACT 421 CCATTTGATG ATGTATCAGA ATCATGTTTA GTCAGGGTGA CACAGGCTGC CACCACACAA 481 GCCACCACAA GAACAGAAGC TATTCCACCA ATTACCACCT TCTTTGTCAT TTTTTTGGTT 541 TTTTGATTTT TTTGGATTTT TTTTATGGGG GGAGTTCCCT ATGAAACAAC CCCTATGGTT 601 CTTCTTGTAA GTGAAGAACT CAGAGGGGTT TTATTGAAGG Predicted gene structure (within gDNA segment 73250 to 67529): Exon 1 70752 70587 ( 166 n); cDNA 1 166 ( 166 n); score: 0.849 Intron 1 70586 69081 (1506 n); Pd: 0.210 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 69080 69050 ( 31 n); cDNA 167 196 ( 30 n); score: 0.742 MATCH C01HBa0163B20.1- SGN-E330049- 0.849 197 0.308 C PGS_C01HBa0163B20.1-_SGN-E330049- (70752 70587,69080 69050) Alignment (genomic DNA sequence = upper lines): TTCATCATTT TGTTGTGGGT TGCACTCTGT TCTGATTTGA TAAAACCATC TGAGCAAGTC 70693 |||||||||| || |||| |||||| | | ||||||||| | |||||||| | | |||||| TTCATCATTT CGTCACGGGT TGCACTGTAT TCTGATTTGG TGAAACCATC TAAACAAGTC 60 TCTTCATAGG CAATCACAGT GCTAAGCCAT GTCTTGAGGT CTTCCACCAC ATCCTTGATC 70633 |||||||| | ||| |||| |||||||||| | |||||||| | ||||| | |||||| ||| TCTTCATAAG CAACGACAGC GCTAAGCCAT GACTTGAGGT CATCCACTAT ATCCTTCATC 120 TTAGAGAAAT CAAAGTTCTC AATCTTAGCG ATAGAGCGTC TTTGGTGTAA GGATCACTGG 70573 || ||||||| |||||||||| |||| ||||| ||||||| | || | | TTTGAGAAAT CAAAGTTCTC AATCCTAGCG ATAGAGCCCC TTAGTT.... .......... 166 CAGCTTTCTT AATCGGCTCG GTGTTTTTTG AGGTCATTCT TGATGTCTGA CACAGGCTGG 70513 .......... .......... .......... .......... .......... .......... 166 CACCACAAGA ACAGAAGCTA TTCCACCGAT TACCACCTTC TTTGCAATTT TATCAAATCA 70453 .......... .......... .......... .......... .......... .......... 166 CATGTTAAGC CAATCATAGT TTTGAAAAAG GCATGAAGTT TTGACCATTA GTTTTAAATG 70393 .......... .......... .......... .......... .......... .......... 166 TGTGTGTTTT GGGAAAAAAT AATCATATGA TAATTTGTTA CAGCCGTTTT CAAAACTAAA 70333 .......... .......... .......... .......... .......... .......... 166 GGTCAAAAAC TTCATGCCTT CGAGAAAATT TTATTTATTT TTGTAAAATA ATAGTTGAGT 70273 .......... .......... .......... .......... .......... .......... 166 TGTCACTTGA TTTTTGGAAA ATTAAGAAAA CCATTTAAAA AGATAATTTT GAAATTTTTT 70213 .......... .......... .......... .......... .......... .......... 166 CAATGAACTT AATTTTAAGG GTTCAAGCGA TCCTCTCAGA AAAGTTATAT GTGGTTGACC 70153 .......... .......... .......... .......... .......... .......... 166 AACGAATTAA ATATGTCAAT AATGAAAATA TTTAAGAATT ATTCGTGAAA AGAACTTATT 70093 .......... .......... .......... .......... .......... .......... 166 TAAAAATGAA CAGAAATTAT TTGATACATA AACATTCATA CTATTTCAAG AAATGAAATA 70033 .......... .......... .......... .......... .......... .......... 166 ATTCTAATGT GGAAGTTTCA GAAATAATTC TAGCTTAACA ATTTATTCGA ATCAAAATTT 69973 .......... .......... .......... .......... .......... .......... 166 TCAAATAAGC GAGTAGCTCA AACGCTTAAA TATGAATATG TATTATTTGA TAACTATGAA 69913 .......... .......... .......... .......... .......... .......... 166 AGAATATGAA AAATATTTTA ACTTATCCTG ACAAGCCTGG ATTTGCCCAA AAGACAAGTT 69853 .......... .......... .......... .......... .......... .......... 166 AGTTCACTTA GCATTTGTGA AAAAGATACA TTTTTTTATT TAAGTCAATT GCACAAACCT 69793 .......... .......... .......... .......... .......... .......... 166 TGTATTGTTT GTAATCATGG AAGGATTTGA CATTTATCCC TACCTTGTTA ATAGAACTTC 69733 .......... .......... .......... .......... .......... .......... 166 AAAATATACA TGAGAGGTGG GCTACACCAC GTCTCCCCGG TTACATGTCA AAAGATATTT 69673 .......... .......... .......... .......... .......... .......... 166 CTAAGACTTC GGTTGAACAC TTCCTTAGAG AGAACACTAT TAATTAAAGA CACTCTAATT 69613 .......... .......... .......... .......... .......... .......... 166 AGTGAAATAA AGGTATCAAT TCAAACTCTT AATTTCTCGT TGAGGATTCA ATAACAAATC 69553 .......... .......... .......... .......... .......... .......... 166 CACTAAAATA TCATTAGGTA GTGTATGAGA AGGGTACAGT GTATGCAGAA CATATTACTA 69493 .......... .......... .......... .......... .......... .......... 166 TCTCAACGAG ATAGAGAGAC TTCTTCTGAA AGACTCTCGA TTCAAGTTTA TCAAAACCAA 69433 .......... .......... .......... .......... .......... .......... 166 GTAATTATAT AAGAAAATAA CAATGAAAAA AGCATAGTCA TTAATTAATA AGAAAAACAG 69373 .......... .......... .......... .......... .......... .......... 166 TGCAAAGTCT ACACGAAAAA AACACTAACA AGAGTAAAAT ATTGTAATCA AACACATTAA 69313 .......... .......... .......... .......... .......... .......... 166 CAACATATGG CAGGAACTAC AAGGGTACAA CAATTACTAT GACAGACAAA CAAACAAGCC 69253 .......... .......... .......... .......... .......... .......... 166 TAAACCTTCG CAAGGCAACA CACCCTCCAT CCCTTCTATC CCTCTACCTT AATCAAGGAT 69193 .......... .......... .......... .......... .......... .......... 166 CTATACTCCT TCCTATCTAG AGTCGTGACC TCGATAACAT GAAGTTGTGT CATATATTGT 69133 .......... .......... .......... .......... .......... .......... 166 ATAATCACCT TTTTCTCAAT ACTTCTTTGG CCTACATATA TCCTTTGTGA ATCCCCAACA 69073 || |||| .......... .......... .......... .......... .......... ..CCTCAACG 174 ACTAGATTCT CACTCCTCCT CAC 69050 ||||| || || |||| | ||| GCTAGA-TCA AACACCTCTT CAC 196 hqPGS_C01HBa0163B20.1-_SGN-E330049- (70752 70587,69080 69050) ******************************************************************************** EST sequence 10 -strand 532 n (File: SGN-E331514-) 1 ACCAATAAGC ACAACATTTA GCATGTTCTT TTCGATTTCA ATGTGTTCCT TGTATGTACC 61 CGCCTTGATC AGGATAACGA AAGGAGTTGG ACTGCTCCTG GGGACAGCTT GAAGTGCTTC 121 CTGAATGGTC TTGTATTGTC CGCCTCCACT GGTAGAAACC ACAGCATTAG GCTTGGAGGC 181 AGAAATTTGA AGGAGCTTAC GGTTACTAGC TTCGACAAAT GAGTCACTGT TTGATAACAA 241 TTTGCGGGTA AGGCCTGTGT TTTGTGTGAT CATTTCACCA AAGTTGTTGA CCATGGAAAG 301 AGCATTGCTA CTCAGCTCCC GGGTGGTACT CATTAGCTTC ATCATTTCGT CACGGGTTGC 361 ACTGTATTCT GATTTGGTGA AACCATCTAA ACAAGTCTCT TCATAAGCAA CGACAGCGCT 421 AAGCCATGAC TTGAGGTCAT CCACTATATC CTTCATCTTT GAGAAATCAA AGTTCTCAAT 481 CCTAGCGATA GAGCCCCTTA GTTCCTCAAC GGCTAGATCA AACACCTCTT CA Predicted gene structure (within gDNA segment 72003 to 66959): Exon 1 71085 70587 ( 499 n); cDNA 1 503 ( 503 n); score: 0.836 Intron 1 70586 70518 ( 69 n); Pd: 0.210 (s: 0.86), Pa: 0.885 (s: 0) Exon 2 70517 70488 ( 30 n); cDNA 504 532 ( 29 n); score: 0.500 MATCH C01HBa0163B20.1- SGN-E331514- 0.836 529 0.994 C PGS_C01HBa0163B20.1-_SGN-E331514- (71085 70587,70517 70488) Alignment (genomic DNA sequence = upper lines): ACCAATAAAC ACAACATTT- GCCTG-TCTT TTCAATTTCA ATGTGTTCCT TGTATGTACC 71028 |||||||| | ||||||||| || || |||| ||| |||||| |||||||||| |||||||||| ACCAATAAGC ACAACATTTA GCATGTTCTT TTCGATTTCA ATGTGTTCCT TGTATGTACC 60 GGCCTTGATC AGGATAATGA AAGGAGTTGT ATAGTTCATG AGGACAGCGT TAAGTTC-TC 70969 ||||||||| ||||||| || ||||||||| | | || || ||||||| | |||| | || CGCCTTGATC AGGATAACGA AAGGAGTTGG ACTGCTCCTG GGGACAGCTT GAAGTGCTTC 120 CTGAAATGGT CTTGTATTGT CCGTCACCAC TTGCAGAAAC CACAGCATTA GGCTTGGAGG 70909 ||| |||||| |||||||||| ||| | |||| | | |||||| |||||||||| |||||||||| CTG-AATGGT CTTGTATTGT CCGCCTCCAC TGGTAGAAAC CACAGCATTA GGCTTGGAGG 179 GAGAAATTTG AAGGAGCTTA TGGCTACTGG CTTCAACAAA CCAGTCACTA TTTGATAACA 70849 ||||||||| |||||||||| || |||| | |||| ||||| ||||||| |||||||||| CAGAAATTTG AAGGAGCTTA CGGTTACTAG CTTCGACAAA TGAGTCACTG TTTGATAACA 239 ATTTGCGGGT AAGGCCAGTG GTTTTTGTGA TCGTTTCACC GAAAACTGTT GGCCATGGAA 70789 |||||||||| |||||| ||| ||| ||||| || ||||||| ||| |||| | |||||||| ATTTGCGGGT AAGGCCTGTG TTTTGTGTGA TCATTTCACC -AAAGTTGTT GACCATGGAA 298 AGAGCATTGA TACTCAGCT- -C-TTTCGTA TTCAATATCT TCATCATTTT GTTGTGGGTT 70732 ||||||||| ||||||||| | | ||| ||| || || ||||||||| || ||||| AGAGCATTGC TACTCAGCTC CCGGGTGGTA CTCATTAGCT TCATCATTTC GTCACGGGTT 358 GCACTCTGTT CTGATTTGAT AAAACCATCT GAGCAAGTCT CTTCATAGGC AATCACAGTG 70672 ||||| | || |||||||| | ||||||||| | ||||||| ||||||| || || |||| | GCACTGTATT CTGATTTGGT GAAACCATCT AAACAAGTCT CTTCATAAGC AACGACAGCG 418 CTAAGCCATG TCTTGAGGTC TTCCACCACA TCCTTGATCT TAGAGAAATC AAAGTTCTCA 70612 |||||||||| ||||||||| ||||| | | ||||| |||| | |||||||| |||||||||| CTAAGCCATG ACTTGAGGTC ATCCACTATA TCCTTCATCT TTGAGAAATC AAAGTTCTCA 478 ATCTTAGCGA TAGAGCGTCT TTGGTGTAAG GATCACTGGC AGCTTTCTTA ATCGGCTCGG 70552 ||| |||||| |||||| || | | | ATCCTAGCGA TAGAGCCCCT TAGTT..... .......... .......... .......... 503 TGTTTTTTGA GGTCATTCTT GATGTCTGAC ACAGGCTGGC ACCACAAGAA CAGAAGCTAT 70492 || || | ||| || | | .......... .......... .......... ....CCT-CA ACGGCTAGAT CAAACACCTC 528 TCCA 70488 | || TTCA 532 hqPGS_C01HBa0163B20.1-_SGN-E331514- (71085 70587,70517 70488) ******************************************************************************** EST sequence 99 -strand 685 n (File: SGN-E332551-) 1 CATAACGAAA CCATCACCAC AAACACCCAA GGGTGGCTGT ATGCCATGTT GATATACGGT 61 TAGGAACTAC TGCCTGGTCA CCGGTGATTA TGGTCTTGGT TGGGCCTTCA CCAATAAGCA 121 CAACATTTAG CATGTTCTTT TCGATTTGAA TGTGTTCCTT GTATGTACCC GCCTTGATCA 181 GGATAACGAA AGGAGTTGGA CTGCTCTTGG GGACAGCTTG AAGTGCTTCC TGAATGGTCT 241 TGTATTGTCC GCCTCCACTG GCAGAAACCA CAGCATTAGG CTTGGAGGCA GAAATTTGAA 301 GGAGCTTACG ATTACTGGCT TCGACAAATG AGTCACTGTT TGATAACAAT TTGCGGGTAA 361 GGCCTGTGTT TTGTGTGATC ATTTCACCGA AGCTGTTGAC CATGGAAAGA GCATTGCTAC 421 TCAGCTCCCG AGTGGTGCTC ATTAGCTTCA TCATTTCGTC ACGGGTTGCA CTGTATTCTG 481 ATTTGGTGAA ACCATCTAAA CAAGTCTCTT CATAAGCAAC GACAGCGCTA AGCCATGACT 541 TGAGGTCATC CACTATATCC TTCATCTTAG AGAAATCAAA GTTCTCAATC CTAGCGATAG 601 AGCCCCTTAG TTCCTCAACG GCTAGATCAA ACACCTCTTC ACAAGCAAGG AGAGCGTCTT 661 TGGTGTAAGG ATCACTAGCA GCTTT Predicted gene structure (within gDNA segment 73138 to 66519): Exon 1 71683 71600 ( 84 n); cDNA 2 84 ( 83 n); score: 0.708 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 2 71110 70591 ( 520 n); cDNA 85 608 ( 524 n); score: 0.846 MATCH C01HBa0163B20.1- SGN-E332551- 0.827 604 0.882 C PGS_C01HBa0163B20.1-_SGN-E332551- (71683 71600,71110 70591) Alignment (genomic DNA sequence = upper lines): ATAACGAACC TTTCACCAGA AACA-CCAAG GGAGGTTGTA TGCCATTTTA CTACACCGCC 71625 |||||||| | |||||| | |||| ||||| || || |||| |||||| || || || | ATAACGAAAC CATCACCACA AACACCCAAG GGTGGCTGTA TGCCATGTTG ATATACGGTT 61 ACCATTCTTA CTCCCTTGTC ACCCAGTGAC AGTGGCGGTA GCCATAAATT TCACAAAGAG 71565 | | | || || ||| ||| ||| AGGAA-C-TA CTGCCTGGTC ACCGG..... .......... .......... .......... 84 TGTCCAAAAA TTGTATAGGG GTATATTTTT TCTTTTGGAT GAATGAGTGC ACTAGAAATT 71505 .......... .......... .......... .......... .......... .......... 84 TTAAAAATTA AAGTACGTAA TATACATGAA AATTTTTGGA AAGAAAAGAT GAAAAGATGA 71445 .......... .......... .......... .......... .......... .......... 84 ATGAGTGGAC TAGAAAATTT AAAAATTAAA CTATGTAGTA TACATGAAAT TTGTGGGGGG 71385 .......... .......... .......... .......... .......... .......... 84 GGGGGGGGAT ACCAAATATA TATGAATTTT TTTTTTAAAA AAACGAGGAA AAGCTACTGC 71325 .......... .......... .......... .......... .......... .......... 84 TAGGGAAATT TGAACTCACA AGCGCTTAAA TGTTTGGCTC TTTCAAGACA ACTTAAACCA 71265 .......... .......... .......... .......... .......... .......... 84 CTAGGCTGCA CCTTAAACCA CTAGGCTACA CCTTGTTGTG TTAAGGGTGT CCAAAATAAA 71205 .......... .......... .......... .......... .......... .......... 84 TTAGTTAACC ATTTTGTATA TTATTTTACT TGTATATACT ATGTAATTTA CCGACGAAGG 71145 .......... .......... .......... .......... .......... .......... 84 GTGTCCAATA GTATATAGCT ACGCCCCTGC CTAGTGATTA TGGTCTTGGT TGGCCCTTCA 71085 |||||| |||||||||| ||| |||||| .......... .......... .......... ....TGATTA TGGTCTTGGT TGGGCCTTCA 110 CCAATAAACA CAACATTT-G CCTG-TCTTT TCAATTTCAA TGTGTTCCTT GTATGTACCG 71027 ||||||| || |||||||| | | || ||||| || |||| || |||||||||| ||||||||| CCAATAAGCA CAACATTTAG CATGTTCTTT TCGATTTGAA TGTGTTCCTT GTATGTACCC 170 GCCTTGATCA GGATAATGAA AGGAGTTGTA TAGTTCATGA GGACAGCGTT AAGTTC-TCC 70968 |||||||||| |||||| ||| |||||||| | | || || ||||||| | |||| | ||| GCCTTGATCA GGATAACGAA AGGAGTTGGA CTGCTCTTGG GGACAGCTTG AAGTGCTTCC 230 TGAAATGGTC TTGTATTGTC CGTCACCACT TGCAGAAACC ACAGCATTAG GCTTGGAGGG 70908 || ||||||| |||||||||| || | ||||| ||||||||| |||||||||| ||||||||| TG-AATGGTC TTGTATTGTC CGCCTCCACT GGCAGAAACC ACAGCATTAG GCTTGGAGGC 289 AGAAATTTGA AGGAGCTTAT GGCTACTGGC TTCAACAAAC CAGTCACTAT TTGATAACAA 70848 |||||||||| ||||||||| | ||||||| ||| ||||| ||||||| | |||||||||| AGAAATTTGA AGGAGCTTAC GATTACTGGC TTCGACAAAT GAGTCACTGT TTGATAACAA 349 TTTGCGGGTA AGGCCAGTGG TTTTTGTGAT CGTTTCACCG AAAACTGTTG GCCATGGAAA 70788 |||||||||| ||||| ||| ||| |||||| | |||||||| || |||||| ||||||||| TTTGCGGGTA AGGCCTGTGT TTTGTGTGAT CATTTCACCG -AAGCTGTTG ACCATGGAAA 408 GAGCATTGAT ACTCAGCT-- C-TTTCGTAT TCAATATCTT CATCATTTTG TTGTGGGTTG 70731 |||||||| | |||||||| | | || ||| || ||| |||||||| | | |||||| GAGCATTGCT ACTCAGCTCC CGAGTGGTGC TCATTAGCTT CATCATTTCG TCACGGGTTG 468 CACTCTGTTC TGATTTGATA AAACCATCTG AGCAAGTCTC TTCATAGGCA ATCACAGTGC 70671 |||| | ||| ||||||| | ||||||||| | |||||||| |||||| ||| | |||| || CACTGTATTC TGATTTGGTG AAACCATCTA AACAAGTCTC TTCATAAGCA ACGACAGCGC 528 TAAGCCATGT CTTGAGGTCT TCCACCACAT CCTTGATCTT AGAGAAATCA AAGTTCTCAA 70611 ||||||||| ||||||||| ||||| | || |||| ||||| |||||||||| |||||||||| TAAGCCATGA CTTGAGGTCA TCCACTATAT CCTTCATCTT AGAGAAATCA AAGTTCTCAA 588 TCTTAGCGAT AGAGCGTCTT 70591 || ||||||| ||||| ||| TCCTAGCGAT AGAGCCCCTT 608 hqPGS_C01HBa0163B20.1-_SGN-E332551- (71683 71600,71110 70591) ******************************************************************************** EST sequence 121 -strand 694 n (File: SGN-E333376-) 1 AGCGTATAAC GTGTCTTGGT AACCATCGAT ATGNCAGTTG TAGAGANCAG CCTANTCAGC 61 ATTAATTCTC AATGCAACGG CTTGTTCTTT TGTGGGTCCT GCTGTGTTTT CAATACCCAT 121 GTCCTTCATA ACGAAACCAT CACCACAAAC ACCAAGGGTG GCTGTATGCC ATGTTGATAT 181 ACGGTTAGGA ACTACTGCCT GGTCACCGGT GATTATGGTC TTGGTTGGGC CTTCACCAAT 241 AAGCACAACA TTTAGCATGT TCTTTTCGAT TTCAATGTGT TCCTTGTATG TACCCGCCTT 301 GATCAGGATA ACGAAAGGAG TTGGACTGCT CCTGGGGACA GCTTGAAGTG CTTCCTGAAT 361 GGTCTTGTAT TGTCCGCCTC CACTGGTAGA AACCACAGCA TTAGGCTTGG AGGCAGAAAT 421 TTGAAGGAGC TTACGGTTAC TAGCTTCGAC AAATGAGTCA CTGTTTGATA ACAATTTGCG 481 GGTAAGGCCT GTGTTTTGTG TGATCATTTC ACCAAAGTTG TTGACCATGG AAAGAGCATT 541 GCTACTCAGC TCCCGGGTGG TACTCATTAG CTTCATCATT TCGTCACGGG TTGCACTGTA 601 TTCTGATTTG GTGAAACCAT CTAAACAAGT CTCTTCATAA GCAACGACAG CGCTAAGCCA 661 TGACTTGAGG TCATCCACTA TATCCTTCAT CTTT Predicted gene structure (within gDNA segment 74343 to 67679): Exon 1 71810 71600 ( 211 n); cDNA 1 209 ( 209 n); score: 0.768 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 2 71110 70631 ( 480 n); cDNA 210 693 ( 484 n); score: 0.840 MATCH C01HBa0163B20.1- SGN-E333376- 0.818 691 0.996 C PGS_C01HBa0163B20.1-_SGN-E333376- (71810 71600,71110 70631) Alignment (genomic DNA sequence = upper lines): AGCGTATAGG ATGTATTGGA AACCATCGAT TTTGTAGTTG TAGACAATTG CTTTATCATC 71751 |||||||| ||| |||| |||||||||| | ||||| |||| | | | | ||| | AGCGTATAAC GTGTCTTGGT AACCATCGAT ATGNCAGTTG TAGAGANCAG CCTANTCAGC 60 ATTAATCCTC AATGCAACAA CTTGTTCTTT TACTGGTCCT GCTCTGTTTT CAATACCGAT 71691 |||||| ||| |||||||| |||||||||| | |||||| ||| |||||| ||||||| || ATTAATTCTC AATGCAACGG CTTGTTCTTT TGTGGGTCCT GCTGTGTTTT CAATACCCAT 120 GTCCCTGATA ACGAACCTTT CACCAGAAAC ACCAAGGGAG GTTGTATGCC ATTTTACTAC 71631 |||| | ||| ||||| | | ||||| |||| |||||||| | | |||||||| || || || GTCCTTCATA ACGAAACCAT CACCACAAAC ACCAAGGGTG GCTGTATGCC ATGTTGATAT 180 ACCGCCACCA TTCTTACTCC CTTGTCACCC AGTGACAGTG GCGGTAGCCA TAAATTTCAC 71571 || | | | | |||| | || |||||| ACGGTTAGGA -AC-TACTGC CTGGTCACCG G......... .......... .......... 209 AAAGAGTGTC CAAAAATTGT ATAGGGGTAT ATTTTTTCTT TTGGATGAAT GAGTGCACTA 71511 .......... .......... .......... .......... .......... .......... 209 GAAATTTTAA AAATTAAAGT ACGTAATATA CATGAAAATT TTTGGAAAGA AAAGATGAAA 71451 .......... .......... .......... .......... .......... .......... 209 AGATGAATGA GTGGACTAGA AAATTTAAAA ATTAAACTAT GTAGTATACA TGAAATTTGT 71391 .......... .......... .......... .......... .......... .......... 209 GGGGGGGGGG GGGGATACCA AATATATATG AATTTTTTTT TTAAAAAAAC GAGGAAAAGC 71331 .......... .......... .......... .......... .......... .......... 209 TACTGCTAGG GAAATTTGAA CTCACAAGCG CTTAAATGTT TGGCTCTTTC AAGACAACTT 71271 .......... .......... .......... .......... .......... .......... 209 AAACCACTAG GCTGCACCTT AAACCACTAG GCTACACCTT GTTGTGTTAA GGGTGTCCAA 71211 .......... .......... .......... .......... .......... .......... 209 AATAAATTAG TTAACCATTT TGTATATTAT TTTACTTGTA TATACTATGT AATTTACCGA 71151 .......... .......... .......... .......... .......... .......... 209 CGAAGGGTGT CCAATAGTAT ATAGCTACGC CCCTGCCTAG TGATTATGGT CTTGGTTGGC 71091 |||||||||| ||||||||| .......... .......... .......... .......... TGATTATGGT CTTGGTTGGG 229 CCTTCACCAA TAAACACAAC ATTT-GCCTG -TCTTTTCAA TTTCAATGTG TTCCTTGTAT 71033 |||||||||| ||| |||||| |||| || || ||||||| | |||||||||| |||||||||| CCTTCACCAA TAAGCACAAC ATTTAGCATG TTCTTTTCGA TTTCAATGTG TTCCTTGTAT 289 GTACCGGCCT TGATCAGGAT AATGAAAGGA GTTGTATAGT TCATGAGGAC AGCGTTAAGT 70973 ||||| |||| |||||||||| || ||||||| |||| | | || || |||| ||| | |||| GTACCCGCCT TGATCAGGAT AACGAAAGGA GTTGGACTGC TCCTGGGGAC AGCTTGAAGT 349 TC-TCCTGAA ATGGTCTTGT ATTGTCCGTC ACCACTTGCA GAAACCACAG CATTAGGCTT 70914 | ||||| | |||||||||| |||||||| | ||||| | | |||||||||| |||||||||| GCTTCCTG-A ATGGTCTTGT ATTGTCCGCC TCCACTGGTA GAAACCACAG CATTAGGCTT 408 GGAGGGAGAA ATTTGAAGGA GCTTATGGCT ACTGGCTTCA ACAAACCAGT CACTATTTGA 70854 ||||| |||| |||||||||| ||||| || | ||| ||||| ||||| ||| |||| ||||| GGAGGCAGAA ATTTGAAGGA GCTTACGGTT ACTAGCTTCG ACAAATGAGT CACTGTTTGA 468 TAACAATTTG CGGGTAAGGC CAGTGGTTTT TGTGATCGTT TCACCGAAAA CTGTTGGCCA 70794 |||||||||| |||||||||| | ||| ||| ||||||| || ||||| ||| ||||| ||| TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT TCACC-AAAG TTGTTGACCA 527 TGGAAAGAGC ATTGATACTC AGCT--C-TT TCGTATTCAA TATCTTCATC ATTTTGTTGT 70737 |||||||||| |||| ||||| |||| | | ||| ||| || ||||||| |||| || TGGAAAGAGC ATTGCTACTC AGCTCCCGGG TGGTACTCAT TAGCTTCATC ATTTCGTCAC 587 GGGTTGCACT CTGTTCTGAT TTGATAAAAC CATCTGAGCA AGTCTCTTCA TAGGCAATCA 70677 |||||||||| | ||||||| ||| | |||| ||||| | || |||||||||| || |||| | GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA AGTCTCTTCA TAAGCAACGA 647 CAGTGCTAAG CCATGTCTTG AGGTCTTCCA CCACATCCTT GATCTT 70631 ||| |||||| ||||| |||| ||||| |||| | | |||||| ||||| CAGCGCTAAG CCATGACTTG AGGTCATCCA CTATATCCTT CATCTT 693 hqPGS_C01HBa0163B20.1-_SGN-E333376- (71810 71600,71110 70631) ******************************************************************************** EST sequence 59 -strand 756 n (File: SGN-E331978-) 1 AGTGATCATG CAAGCTTGAT TAGGACCTGG TTTCCTCACA ATCAATTTGC AGTTTTGAAA 61 ACAGCACTTG CATCACCAAA CAAGAAATCA ATGGTGCCTG TAATGGTACA ATCACGATAA 121 AATTGTCTTC CTGAGTGAGC GTATAACGTG TCTTGGTAAC CATCGATATT GCAGTTGTAG 181 AGAACAGCCT TATCAGCATT AATTCTCAAT GCAACGGCTT GTTCTTTTGT GGGTCCTGCT 241 GTGTTTTCAA TACCCATGTC CTTCATAACG AAACCATCAC CACAAACACC AAGGGTGGCT 301 GTATGCCATG TTGATATACG GTTAGGAACT ACTGCCTGGT CACCGGTGAT TATGGTCTTG 361 GTTGGGCCTT CACCAATAAG CACAACATTT AGCATGTTCT TTTCGATTTC AATGTGTTCC 421 TTGTATGTAC CCGCCTTGAT CAGGATAACG AAAGGAGTTG GACTGCTCCT GGGGACAGCT 481 TGAAGTGCTT CCTGAATGGT CTTGTATTGT CCGCCTCCAC TGGTAGAAAC CACAGCATTA 541 GGCTTGGAGG CAGAAATTTG AAGGAGCTTA CGGTTACTAG CTTCGACAAA TGAGTCACTG 601 TTTGATAACA ATTTGCGGGT AAGGCCTGTG TTTTGTGTGA TCATTTCACC AAAGTTGTTG 661 ACCATGGAAA GAGCATTGCT ACTCAGCTCC CGGGTGGTAC TCATTAGCTT CATCATTTCG 721 TCACGGGTTG CACTGTATTC TGATTTGGTG AAACCA Predicted gene structure (within gDNA segment 75713 to 68429): Exon 1 71877 71600 ( 278 n); cDNA 71 346 ( 276 n); score: 0.788 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 2 71110 70705 ( 406 n); cDNA 347 756 ( 410 n); score: 0.837 MATCH C01HBa0163B20.1- SGN-E331978- 0.817 684 0.905 C PGS_C01HBa0163B20.1-_SGN-E331978- (71877 71600,71110 70705) Alignment (genomic DNA sequence = upper lines): CATCACTAAA AATGAAATCA ATGTTGCCTG TAATGATAGA GTCACGGAAC AATTATCTGT 71818 |||||| ||| | ||||||| ||| |||||| ||||| || | ||||| | |||| ||| CATCACCAAA CAAGAAATCA ATGGTGCCTG TAATGGTACA ATCACGATAA AATTGTCTTC 130 ACGAGTGAGC GTATAGGATG TATTGGAAAC CATCGATTTT GTAGTTGTAG ACAATTGCTT 71758 |||||||| ||||| || | |||| ||| ||||||| || | |||||||| | || || | CTGAGTGAGC GTATAACGTG TCTTGGTAAC CATCGATATT GCAGTTGTAG AGAACAGCCT 190 TATCATCATT AATCCTCAAT GCAACAACTT GTTCTTTTAC TGGTCCTGCT CTGTTTTCAA 71698 ||||| |||| ||| |||||| ||||| ||| |||||||| ||||||||| ||||||||| TATCAGCATT AATTCTCAAT GCAACGGCTT GTTCTTTTGT GGGTCCTGCT GTGTTTTCAA 250 TACCGATGTC CCTGATAACG AACCTTTCAC CAGAAACACC AAGGGAGGTT GTATGCCATT 71638 |||| ||||| | | |||||| || | |||| || ||||||| ||||| || | ||||||||| TACCCATGTC CTTCATAACG AAACCATCAC CACAAACACC AAGGGTGGCT GTATGCCATG 310 TTACTACACC GCCACCATTC TTACTCCCTT GTCACCCAGT GACAGTGGCG GTAGCCATAA 71578 || || || | | | | |||| ||| |||||| TTGATATACG GTTAGGA-AC -TACTGCCTG GTCACCGG.. .......... .......... 346 ATTTCACAAA GAGTGTCCAA AAATTGTATA GGGGTATATT TTTTCTTTTG GATGAATGAG 71518 .......... .......... .......... .......... .......... .......... 346 TGCACTAGAA ATTTTAAAAA TTAAAGTACG TAATATACAT GAAAATTTTT GGAAAGAAAA 71458 .......... .......... .......... .......... .......... .......... 346 GATGAAAAGA TGAATGAGTG GACTAGAAAA TTTAAAAATT AAACTATGTA GTATACATGA 71398 .......... .......... .......... .......... .......... .......... 346 AATTTGTGGG GGGGGGGGGG GATACCAAAT ATATATGAAT TTTTTTTTTA AAAAAACGAG 71338 .......... .......... .......... .......... .......... .......... 346 GAAAAGCTAC TGCTAGGGAA ATTTGAACTC ACAAGCGCTT AAATGTTTGG CTCTTTCAAG 71278 .......... .......... .......... .......... .......... .......... 346 ACAACTTAAA CCACTAGGCT GCACCTTAAA CCACTAGGCT ACACCTTGTT GTGTTAAGGG 71218 .......... .......... .......... .......... .......... .......... 346 TGTCCAAAAT AAATTAGTTA ACCATTTTGT ATATTATTTT ACTTGTATAT ACTATGTAAT 71158 .......... .......... .......... .......... .......... .......... 346 TTACCGACGA AGGGTGTCCA ATAGTATATA GCTACGCCCC TGCCTAGTGA TTATGGTCTT 71098 ||| |||||||||| .......... .......... .......... .......... .......TGA TTATGGTCTT 359 GGTTGGCCCT TCACCAATAA ACACAACATT T-GCCTG-TC TTTTCAATTT CAATGTGTTC 71040 |||||| ||| |||||||||| ||||||||| | || || || ||||| |||| |||||||||| GGTTGGGCCT TCACCAATAA GCACAACATT TAGCATGTTC TTTTCGATTT CAATGTGTTC 419 CTTGTATGTA CCGGCCTTGA TCAGGATAAT GAAAGGAGTT GTATAGTTCA TGAGGACAGC 70980 |||||||||| || ||||||| ||||||||| |||||||||| | | | || || ||||||| CTTGTATGTA CCCGCCTTGA TCAGGATAAC GAAAGGAGTT GGACTGCTCC TGGGGACAGC 479 GTTAAGTTC- TCCTGAAATG GTCTTGTATT GTCCGTCACC ACTTGCAGAA ACCACAGCAT 70921 | |||| | ||||| |||| |||||||||| ||||| | || ||| | |||| |||||||||| TTGAAGTGCT TCCTG-AATG GTCTTGTATT GTCCGCCTCC ACTGGTAGAA ACCACAGCAT 538 TAGGCTTGGA GGGAGAAATT TGAAGGAGCT TATGGCTACT GGCTTCAACA AACCAGTCAC 70861 |||||||||| || ||||||| |||||||||| || || |||| ||||| ||| || |||||| TAGGCTTGGA GGCAGAAATT TGAAGGAGCT TACGGTTACT AGCTTCGACA AATGAGTCAC 598 TATTTGATAA CAATTTGCGG GTAAGGCCAG TGGTTTTTGT GATCGTTTCA CCGAAAACTG 70801 | |||||||| |||||||||| |||||||| | || ||| ||| |||| ||||| || ||| || TGTTTGATAA CAATTTGCGG GTAAGGCCTG TGTTTTGTGT GATCATTTCA CC-AAAGTTG 657 TTGGCCATGG AAAGAGCATT GATACTCAGC T--C-TTTCG TATTCAATAT CTTCATCATT 70744 ||| |||||| |||||||||| | |||||||| | | | | || ||| || |||||||||| TTGACCATGG AAAGAGCATT GCTACTCAGC TCCCGGGTGG TACTCATTAG CTTCATCATT 717 TTGTTGTGGG TTGCACTCTG TTCTGATTTG ATAAAACCA 70705 | || ||| ||||||| | |||||||||| | |||||| TCGTCACGGG TTGCACTGTA TTCTGATTTG GTGAAACCA 756 hqPGS_C01HBa0163B20.1-_SGN-E331978- (71877 71600,71110 70705) ******************************************************************************** EST sequence 62 -strand 758 n (File: SGN-E332184-) 1 GAGCAGTGAT CATGCAGCTT GATTAGGACC TGTTTCCTCA CAATCAATTT GCAGTTTGGA 61 AAACAGCACT TGCATCACCA AACAAGAAAT CAATGGTGCC TGTAATGGTA CAATCACGAT 121 AAAATTGTCT TCCTGAGTGA GCGTATAACG TGTCTTGGTA ACCATCGATA TTGCAGTTGT 181 AGAGAACAGC CTTATCAGCA TTAATTCTCA ATGCAACGGC TTGTTCTTTT GTGGGTCCTG 241 CTGTGTTTTC AATACCCATG TCCTTCATAA CGAAACCATC ACCACAAACA CCAAGGGTGG 301 CTGTATGCCA TGTTGATATA CGGTTAGGAA CTACTGCCTG GTCACCGGTG ATTATGGTCT 361 TGGTTGGGCC TTCACCAATA AGCACAACAT TTAGCATGTT CTTTTCGATT TCAATGTGTT 421 CCTTGTATGT ACCCGCCTTG ATCAGGATAA CGAAAGGAGT TGGACTGCTC CTGGGGACAG 481 CTTGAAGTGC TTCCTGAATG GTCTTGTATT GTCCGCCTCC ACTGGTAGAA ACCACAGCAT 541 TAGGCTTGGA GGCAGAAATT TGAAGGAGCT TACGGTTACT AGCTTCGACA AATGAGTCAC 601 TGTTTGATAA CAATTTGCGG GTAAGGCCTG TGTTTTGTGT GATCATTTCA CCAAAGTTGT 661 TGACCATGGA AAGAGCATTG CTACTCAGCT CCCGGGTGGT ACTCATTAGC TTCATCATTT 721 CGTCACGGGT TGCACTGTAT TCTGATTTGG TGAAACCA Predicted gene structure (within gDNA segment 75733 to 68429): Exon 1 71877 71600 ( 278 n); cDNA 73 348 ( 276 n); score: 0.788 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 2 71110 70705 ( 406 n); cDNA 349 758 ( 410 n); score: 0.837 MATCH C01HBa0163B20.1- SGN-E332184- 0.817 684 0.902 C PGS_C01HBa0163B20.1-_SGN-E332184- (71877 71600,71110 70705) Alignment (genomic DNA sequence = upper lines): CATCACTAAA AATGAAATCA ATGTTGCCTG TAATGATAGA GTCACGGAAC AATTATCTGT 71818 |||||| ||| | ||||||| ||| |||||| ||||| || | ||||| | |||| ||| CATCACCAAA CAAGAAATCA ATGGTGCCTG TAATGGTACA ATCACGATAA AATTGTCTTC 132 ACGAGTGAGC GTATAGGATG TATTGGAAAC CATCGATTTT GTAGTTGTAG ACAATTGCTT 71758 |||||||| ||||| || | |||| ||| ||||||| || | |||||||| | || || | CTGAGTGAGC GTATAACGTG TCTTGGTAAC CATCGATATT GCAGTTGTAG AGAACAGCCT 192 TATCATCATT AATCCTCAAT GCAACAACTT GTTCTTTTAC TGGTCCTGCT CTGTTTTCAA 71698 ||||| |||| ||| |||||| ||||| ||| |||||||| ||||||||| ||||||||| TATCAGCATT AATTCTCAAT GCAACGGCTT GTTCTTTTGT GGGTCCTGCT GTGTTTTCAA 252 TACCGATGTC CCTGATAACG AACCTTTCAC CAGAAACACC AAGGGAGGTT GTATGCCATT 71638 |||| ||||| | | |||||| || | |||| || ||||||| ||||| || | ||||||||| TACCCATGTC CTTCATAACG AAACCATCAC CACAAACACC AAGGGTGGCT GTATGCCATG 312 TTACTACACC GCCACCATTC TTACTCCCTT GTCACCCAGT GACAGTGGCG GTAGCCATAA 71578 || || || | | | | |||| ||| |||||| TTGATATACG GTTAGGA-AC -TACTGCCTG GTCACCGG.. .......... .......... 348 ATTTCACAAA GAGTGTCCAA AAATTGTATA GGGGTATATT TTTTCTTTTG GATGAATGAG 71518 .......... .......... .......... .......... .......... .......... 348 TGCACTAGAA ATTTTAAAAA TTAAAGTACG TAATATACAT GAAAATTTTT GGAAAGAAAA 71458 .......... .......... .......... .......... .......... .......... 348 GATGAAAAGA TGAATGAGTG GACTAGAAAA TTTAAAAATT AAACTATGTA GTATACATGA 71398 .......... .......... .......... .......... .......... .......... 348 AATTTGTGGG GGGGGGGGGG GATACCAAAT ATATATGAAT TTTTTTTTTA AAAAAACGAG 71338 .......... .......... .......... .......... .......... .......... 348 GAAAAGCTAC TGCTAGGGAA ATTTGAACTC ACAAGCGCTT AAATGTTTGG CTCTTTCAAG 71278 .......... .......... .......... .......... .......... .......... 348 ACAACTTAAA CCACTAGGCT GCACCTTAAA CCACTAGGCT ACACCTTGTT GTGTTAAGGG 71218 .......... .......... .......... .......... .......... .......... 348 TGTCCAAAAT AAATTAGTTA ACCATTTTGT ATATTATTTT ACTTGTATAT ACTATGTAAT 71158 .......... .......... .......... .......... .......... .......... 348 TTACCGACGA AGGGTGTCCA ATAGTATATA GCTACGCCCC TGCCTAGTGA TTATGGTCTT 71098 ||| |||||||||| .......... .......... .......... .......... .......TGA TTATGGTCTT 361 GGTTGGCCCT TCACCAATAA ACACAACATT T-GCCTG-TC TTTTCAATTT CAATGTGTTC 71040 |||||| ||| |||||||||| ||||||||| | || || || ||||| |||| |||||||||| GGTTGGGCCT TCACCAATAA GCACAACATT TAGCATGTTC TTTTCGATTT CAATGTGTTC 421 CTTGTATGTA CCGGCCTTGA TCAGGATAAT GAAAGGAGTT GTATAGTTCA TGAGGACAGC 70980 |||||||||| || ||||||| ||||||||| |||||||||| | | | || || ||||||| CTTGTATGTA CCCGCCTTGA TCAGGATAAC GAAAGGAGTT GGACTGCTCC TGGGGACAGC 481 GTTAAGTTC- TCCTGAAATG GTCTTGTATT GTCCGTCACC ACTTGCAGAA ACCACAGCAT 70921 | |||| | ||||| |||| |||||||||| ||||| | || ||| | |||| |||||||||| TTGAAGTGCT TCCTG-AATG GTCTTGTATT GTCCGCCTCC ACTGGTAGAA ACCACAGCAT 540 TAGGCTTGGA GGGAGAAATT TGAAGGAGCT TATGGCTACT GGCTTCAACA AACCAGTCAC 70861 |||||||||| || ||||||| |||||||||| || || |||| ||||| ||| || |||||| TAGGCTTGGA GGCAGAAATT TGAAGGAGCT TACGGTTACT AGCTTCGACA AATGAGTCAC 600 TATTTGATAA CAATTTGCGG GTAAGGCCAG TGGTTTTTGT GATCGTTTCA CCGAAAACTG 70801 | |||||||| |||||||||| |||||||| | || ||| ||| |||| ||||| || ||| || TGTTTGATAA CAATTTGCGG GTAAGGCCTG TGTTTTGTGT GATCATTTCA CC-AAAGTTG 659 TTGGCCATGG AAAGAGCATT GATACTCAGC T--C-TTTCG TATTCAATAT CTTCATCATT 70744 ||| |||||| |||||||||| | |||||||| | | | | || ||| || |||||||||| TTGACCATGG AAAGAGCATT GCTACTCAGC TCCCGGGTGG TACTCATTAG CTTCATCATT 719 TTGTTGTGGG TTGCACTCTG TTCTGATTTG ATAAAACCA 70705 | || ||| ||||||| | |||||||||| | |||||| TCGTCACGGG TTGCACTGTA TTCTGATTTG GTGAAACCA 758 hqPGS_C01HBa0163B20.1-_SGN-E332184- (71877 71600,71110 70705) ******************************************************************************** EST sequence 70 -strand 629 n (File: SGN-E332127-) 1 CAGTGATCAT GCAAGCTTGA TTAGGACCTG GTTTCCTCAC AATCAATTTG CAGTTTTGGA 61 AAACAGCACT TGCATCACCA AACAAGAAAT CAATGGTGCC TGTAATGGTA CAATCACGAT 121 AAAATTGTCT TCCTGAGTGA GCGTATAACG TGTCTTGGTA ACCATCGATA TTGCAGTTGT 181 AGAGAACAGC CTTATCAGCA TTAATTCTCA ATGCAACGGC TTGTTCTTTT GTGGGTCCTG 241 CTGTGTTTTC AATACCCATG TCCTTCATAA CGAAACCATC ACCACAAACA CCAAGGGTGG 301 CTGTATGCCA TGTTGATATA CGGTTAGGAA CTACTGCCTG GTCACCGGTG ATTATGGTCT 361 TGGTTGGGCC TTCACCAATA AGCACAACAT TTAGCATGTT CTTTTCGATT TCAATGTGTT 421 CCTTGTATGT ACCCGCCTTG ATCAGGATAA CGAAAGGAGT TGGACTGCTC CTGGGGACAG 481 CTTGAAGTGC TTCCTGAATG GTCTTGTATT GTCCGCCTCC ACTGGTAGAA ACCACAGCAT 541 TAGGCTTGGA GGCAGAAATT TGAAGGAGCT TACGGTTACT AGCTTCGACA AATGAGTCAC 601 TGTTTGATAA CAATTTGCGG GTAAGGCCT Predicted gene structure (within gDNA segment 75733 to 69719): Exon 1 71877 71600 ( 278 n); cDNA 73 348 ( 276 n); score: 0.788 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 2 71110 70833 ( 278 n); cDNA 349 628 ( 280 n); score: 0.872 MATCH C01HBa0163B20.1- SGN-E332127- 0.830 556 0.884 C PGS_C01HBa0163B20.1-_SGN-E332127- (71877 71600,71110 70833) Alignment (genomic DNA sequence = upper lines): CATCACTAAA AATGAAATCA ATGTTGCCTG TAATGATAGA GTCACGGAAC AATTATCTGT 71818 |||||| ||| | ||||||| ||| |||||| ||||| || | ||||| | |||| ||| CATCACCAAA CAAGAAATCA ATGGTGCCTG TAATGGTACA ATCACGATAA AATTGTCTTC 132 ACGAGTGAGC GTATAGGATG TATTGGAAAC CATCGATTTT GTAGTTGTAG ACAATTGCTT 71758 |||||||| ||||| || | |||| ||| ||||||| || | |||||||| | || || | CTGAGTGAGC GTATAACGTG TCTTGGTAAC CATCGATATT GCAGTTGTAG AGAACAGCCT 192 TATCATCATT AATCCTCAAT GCAACAACTT GTTCTTTTAC TGGTCCTGCT CTGTTTTCAA 71698 ||||| |||| ||| |||||| ||||| ||| |||||||| ||||||||| ||||||||| TATCAGCATT AATTCTCAAT GCAACGGCTT GTTCTTTTGT GGGTCCTGCT GTGTTTTCAA 252 TACCGATGTC CCTGATAACG AACCTTTCAC CAGAAACACC AAGGGAGGTT GTATGCCATT 71638 |||| ||||| | | |||||| || | |||| || ||||||| ||||| || | ||||||||| TACCCATGTC CTTCATAACG AAACCATCAC CACAAACACC AAGGGTGGCT GTATGCCATG 312 TTACTACACC GCCACCATTC TTACTCCCTT GTCACCCAGT GACAGTGGCG GTAGCCATAA 71578 || || || | | | | |||| ||| |||||| TTGATATACG GTTAGGA-AC -TACTGCCTG GTCACCGG.. .......... .......... 348 ATTTCACAAA GAGTGTCCAA AAATTGTATA GGGGTATATT TTTTCTTTTG GATGAATGAG 71518 .......... .......... .......... .......... .......... .......... 348 TGCACTAGAA ATTTTAAAAA TTAAAGTACG TAATATACAT GAAAATTTTT GGAAAGAAAA 71458 .......... .......... .......... .......... .......... .......... 348 GATGAAAAGA TGAATGAGTG GACTAGAAAA TTTAAAAATT AAACTATGTA GTATACATGA 71398 .......... .......... .......... .......... .......... .......... 348 AATTTGTGGG GGGGGGGGGG GATACCAAAT ATATATGAAT TTTTTTTTTA AAAAAACGAG 71338 .......... .......... .......... .......... .......... .......... 348 GAAAAGCTAC TGCTAGGGAA ATTTGAACTC ACAAGCGCTT AAATGTTTGG CTCTTTCAAG 71278 .......... .......... .......... .......... .......... .......... 348 ACAACTTAAA CCACTAGGCT GCACCTTAAA CCACTAGGCT ACACCTTGTT GTGTTAAGGG 71218 .......... .......... .......... .......... .......... .......... 348 TGTCCAAAAT AAATTAGTTA ACCATTTTGT ATATTATTTT ACTTGTATAT ACTATGTAAT 71158 .......... .......... .......... .......... .......... .......... 348 TTACCGACGA AGGGTGTCCA ATAGTATATA GCTACGCCCC TGCCTAGTGA TTATGGTCTT 71098 ||| |||||||||| .......... .......... .......... .......... .......TGA TTATGGTCTT 361 GGTTGGCCCT TCACCAATAA ACACAACATT T-GCCTG-TC TTTTCAATTT CAATGTGTTC 71040 |||||| ||| |||||||||| ||||||||| | || || || ||||| |||| |||||||||| GGTTGGGCCT TCACCAATAA GCACAACATT TAGCATGTTC TTTTCGATTT CAATGTGTTC 421 CTTGTATGTA CCGGCCTTGA TCAGGATAAT GAAAGGAGTT GTATAGTTCA TGAGGACAGC 70980 |||||||||| || ||||||| ||||||||| |||||||||| | | | || || ||||||| CTTGTATGTA CCCGCCTTGA TCAGGATAAC GAAAGGAGTT GGACTGCTCC TGGGGACAGC 481 GTTAAGTTC- TCCTGAAATG GTCTTGTATT GTCCGTCACC ACTTGCAGAA ACCACAGCAT 70921 | |||| | ||||| |||| |||||||||| ||||| | || ||| | |||| |||||||||| TTGAAGTGCT TCCTG-AATG GTCTTGTATT GTCCGCCTCC ACTGGTAGAA ACCACAGCAT 540 TAGGCTTGGA GGGAGAAATT TGAAGGAGCT TATGGCTACT GGCTTCAACA AACCAGTCAC 70861 |||||||||| || ||||||| |||||||||| || || |||| ||||| ||| || |||||| TAGGCTTGGA GGCAGAAATT TGAAGGAGCT TACGGTTACT AGCTTCGACA AATGAGTCAC 600 TATTTGATAA CAATTTGCGG GTAAGGCC 70833 | |||||||| |||||||||| |||||||| TGTTTGATAA CAATTTGCGG GTAAGGCC 628 hqPGS_C01HBa0163B20.1-_SGN-E332127- (71877 71600,71110 70833) ******************************************************************************** EST sequence 76 -strand 643 n (File: SGN-E332171-) 1 CATCCTTCCT TGAGCAGTGA TCATGCAAGC TTGATTAGGA CCTGGTTTCN TCACAATCAA 61 TTTGCAGTTT TGGAAAACAG CACTTGCATC ACCAAACAAG AAATCAATGG TGCCTGTAAT 121 GGTACAATCA CGATAAAATT GTCTTCCTGA GTGAGCGTAT AACGTGTCTT GGTAACCATC 181 GATATTGCAG TTGTAGAGAA CAGCCTTATC AGCATTAATT CTCAATGCAA CGGCTTGTTC 241 TTTTGTGGGT CCTGCTGTGT TTTCAATACC CATGTCCTTC ATAACGAAAC CATCACCACA 301 AACACCAAGG GTGGCTGTAT GCCATGTTGA TATACGGTTA GGAACTACTG CCTGGTCACC 361 GGTGATTATG GTCTTGGTTG GGCCTTCACC AATAAGCACA ACATTTAGCA TGTTCTTTTC 421 GATTTCAATG TGTTCCTTGT ATGTACCCGC CTTGATCAGG ATAACGAAAG GAGTTGGACT 481 GCTCCTGGGG ACAGCTTGAA GTGCTTCCTG AATGGTCTTG TATTGTCCGC CTCCACTGGT 541 AGAAACCACA GCATTAGGCT TGGAGGCAGA AATTTGAAGG AGCTTACGGT TACTAGCTTC 601 GACAAATGAG TCACTGTTTG ATAACAATTT GCGGGTAAGG CCT Predicted gene structure (within gDNA segment 75873 to 69719): Exon 1 71877 71600 ( 278 n); cDNA 87 362 ( 276 n); score: 0.788 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.89) Exon 2 71110 70833 ( 278 n); cDNA 363 642 ( 280 n); score: 0.872 MATCH C01HBa0163B20.1- SGN-E332171- 0.830 556 0.865 C PGS_C01HBa0163B20.1-_SGN-E332171- (71877 71600,71110 70833) Alignment (genomic DNA sequence = upper lines): CATCACTAAA AATGAAATCA ATGTTGCCTG TAATGATAGA GTCACGGAAC AATTATCTGT 71818 |||||| ||| | ||||||| ||| |||||| ||||| || | ||||| | |||| ||| CATCACCAAA CAAGAAATCA ATGGTGCCTG TAATGGTACA ATCACGATAA AATTGTCTTC 146 ACGAGTGAGC GTATAGGATG TATTGGAAAC CATCGATTTT GTAGTTGTAG ACAATTGCTT 71758 |||||||| ||||| || | |||| ||| ||||||| || | |||||||| | || || | CTGAGTGAGC GTATAACGTG TCTTGGTAAC CATCGATATT GCAGTTGTAG AGAACAGCCT 206 TATCATCATT AATCCTCAAT GCAACAACTT GTTCTTTTAC TGGTCCTGCT CTGTTTTCAA 71698 ||||| |||| ||| |||||| ||||| ||| |||||||| ||||||||| ||||||||| TATCAGCATT AATTCTCAAT GCAACGGCTT GTTCTTTTGT GGGTCCTGCT GTGTTTTCAA 266 TACCGATGTC CCTGATAACG AACCTTTCAC CAGAAACACC AAGGGAGGTT GTATGCCATT 71638 |||| ||||| | | |||||| || | |||| || ||||||| ||||| || | ||||||||| TACCCATGTC CTTCATAACG AAACCATCAC CACAAACACC AAGGGTGGCT GTATGCCATG 326 TTACTACACC GCCACCATTC TTACTCCCTT GTCACCCAGT GACAGTGGCG GTAGCCATAA 71578 || || || | | | | |||| ||| |||||| TTGATATACG GTTAGGA-AC -TACTGCCTG GTCACCGG.. .......... .......... 362 ATTTCACAAA GAGTGTCCAA AAATTGTATA GGGGTATATT TTTTCTTTTG GATGAATGAG 71518 .......... .......... .......... .......... .......... .......... 362 TGCACTAGAA ATTTTAAAAA TTAAAGTACG TAATATACAT GAAAATTTTT GGAAAGAAAA 71458 .......... .......... .......... .......... .......... .......... 362 GATGAAAAGA TGAATGAGTG GACTAGAAAA TTTAAAAATT AAACTATGTA GTATACATGA 71398 .......... .......... .......... .......... .......... .......... 362 AATTTGTGGG GGGGGGGGGG GATACCAAAT ATATATGAAT TTTTTTTTTA AAAAAACGAG 71338 .......... .......... .......... .......... .......... .......... 362 GAAAAGCTAC TGCTAGGGAA ATTTGAACTC ACAAGCGCTT AAATGTTTGG CTCTTTCAAG 71278 .......... .......... .......... .......... .......... .......... 362 ACAACTTAAA CCACTAGGCT GCACCTTAAA CCACTAGGCT ACACCTTGTT GTGTTAAGGG 71218 .......... .......... .......... .......... .......... .......... 362 TGTCCAAAAT AAATTAGTTA ACCATTTTGT ATATTATTTT ACTTGTATAT ACTATGTAAT 71158 .......... .......... .......... .......... .......... .......... 362 TTACCGACGA AGGGTGTCCA ATAGTATATA GCTACGCCCC TGCCTAGTGA TTATGGTCTT 71098 ||| |||||||||| .......... .......... .......... .......... .......TGA TTATGGTCTT 375 GGTTGGCCCT TCACCAATAA ACACAACATT T-GCCTG-TC TTTTCAATTT CAATGTGTTC 71040 |||||| ||| |||||||||| ||||||||| | || || || ||||| |||| |||||||||| GGTTGGGCCT TCACCAATAA GCACAACATT TAGCATGTTC TTTTCGATTT CAATGTGTTC 435 CTTGTATGTA CCGGCCTTGA TCAGGATAAT GAAAGGAGTT GTATAGTTCA TGAGGACAGC 70980 |||||||||| || ||||||| ||||||||| |||||||||| | | | || || ||||||| CTTGTATGTA CCCGCCTTGA TCAGGATAAC GAAAGGAGTT GGACTGCTCC TGGGGACAGC 495 GTTAAGTTC- TCCTGAAATG GTCTTGTATT GTCCGTCACC ACTTGCAGAA ACCACAGCAT 70921 | |||| | ||||| |||| |||||||||| ||||| | || ||| | |||| |||||||||| TTGAAGTGCT TCCTG-AATG GTCTTGTATT GTCCGCCTCC ACTGGTAGAA ACCACAGCAT 554 TAGGCTTGGA GGGAGAAATT TGAAGGAGCT TATGGCTACT GGCTTCAACA AACCAGTCAC 70861 |||||||||| || ||||||| |||||||||| || || |||| ||||| ||| || |||||| TAGGCTTGGA GGCAGAAATT TGAAGGAGCT TACGGTTACT AGCTTCGACA AATGAGTCAC 614 TATTTGATAA CAATTTGCGG GTAAGGCC 70833 | |||||||| |||||||||| |||||||| TGTTTGATAA CAATTTGCGG GTAAGGCC 642 hqPGS_C01HBa0163B20.1-_SGN-E332171- (71877 71600,71110 70833) ******************************************************************************** EST sequence 36 -strand 967 n (File: SGN-E378571-) 1 GGTAACCATG GCTGTGTGTA TTAATGAATT TACCGGCAGT GAAGCTGTTA ATAACGTCTC 61 CTGAAATATC CTTTGGGTAA CCTCTCCATG TGGAGACTCT TTTGTCAAGT GCAGCACCTG 121 GTCCTCTGTT CTGATACTCT GCATAAAAAC ATGTGTGTAT TCCAAAATCA GTTGTGTTCC 181 ATGGTGACCA TCCTGATGGA TCGACGAATC CATCGATGTT TGATTGCATT ATGATGGTCT 241 TGGAAAACTC CTTCCATGGA CGTCCAAGAT AGACTTGACN TGGTGGATTG GCGCTAGTGA 301 GTGCTGGATC AGCCTTGATG TCACAATTCT GGATAACGAA TGTACCAAAG GAATCTTTTC 361 TCATCCTTCC TTGAGCAGTG ATCATGCAAG CTTGATTAGG ACCTGGTTTC CTCACAATCA 421 ATTTGCAGTT TTGGAAAACA GCACTTGCAT CACCAAACAA GAAATCAATG GTGCCTGTAA 481 TGGTACAATC ACGATAAAAT TGTCTTCCTG AGTGAGCGTA TAACGTGTCT TGGTAACCAT 541 CGATATTGCA GTTGTAGAGA ACAGCCCTAT CGGCATTAAT TCTCAATGCA ACGGCTTGTT 601 CTTTTGTGGG TCCTGCTGTG TTTTCAATAC CCATGTCCTT CATAACGAAA CCATCACCAC 661 AAACACCAAG GGTGGCTGTA TGCCATGTTG ATATACGGTT AGGAATTACT GCCTGGTCAC 721 CGGTGATTAT GGTCTTGGTT GGGCCTTCAC CAATAAACAC AACATTTAGC ATGTTCTTTT 781 CGATTTCAAT GTGTTCCTTG TATGTACCCG CCTTGATCAG GATAACGAAA GGAGTTGGAC 841 TGCTCCTGGG GACAGCTTGA AGTGCTTCCT GAATGGTCTT GTATTGTCCG CCTCCACTGG 901 CAGAAACCAC AGCATTAGGC TTGGAGGCAG AAATTTGAAG GAGCTGACGG TTACTGGCTT 961 CGACAAA Predicted gene structure (within gDNA segment 78198 to 70071): Exon 1 76914 76576 ( 339 n); cDNA 1 347 ( 347 n); score: 0.792 Intron 1 76575 74694 (1882 n); Pd: 0.990 (s: 0.72), Pa: 0.892 (s: 0) Exon 2 74693 74687 ( 7 n); cDNA 348 353 ( 6 n); score: 0.714 Intron 2 74686 72321 (2366 n); Pd: 0.844 (s: 0), Pa: 0.929 (s: 0) Exon 3 72320 72316 ( 5 n); cDNA 354 358 ( 5 n); score: 0.600 Intron 3 72315 71957 ( 359 n); Pd: 0.000 (s: 0), Pa: 0.788 (s: 0.78) Exon 4 71956 71600 ( 357 n); cDNA 359 723 ( 365 n); score: 0.725 Intron 4 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.91) Exon 5 71110 70869 ( 242 n); cDNA 724 967 ( 244 n); score: 0.874 MATCH C01HBa0163B20.1- SGN-E378571- 0.788 950 0.982 C PGS_C01HBa0163B20.1-_SGN-E378571- (76914 76576,74693 74687,72320 72316,71956 71600,71110 70869) Alignment (genomic DNA sequence = upper lines): GGTAGCCAAG GGTCTCTTGT GTTGATGAAA TTGCCGTCAA TGAATTGGTT AATAGTGTCT 76855 |||| ||| | | | | ||| || ||||| || ||| || |||| ||| |||| |||| GGTAACCATG GCTGT-GTGT ATTAATGAAT TTACCGGCAG TGAAGCTGTT AATAACGTCT 59 CCTGAAATTC CCTTTTGGTA ACCTCTCCAT GTTGAGATTT TTTTGTCAAG TGCAGCACCT 76795 |||||||| ||||| |||| |||||||||| || |||| | |||||||||| |||||||||| CCTGAAATAT CCTTTGGGTA ACCTCTCCAT GTGGAGACTC TTTTGTCAAG TGCAGCACCT 119 GGTTCTCTGT TCTGATACTC TGCAT-AAAA CATGTGTGTT TTCCAAAATT AGTTGTGTTC 76736 ||| |||||| |||||||||| ||||| |||| ||||||||| ||||||||| |||||||||| GGTCCTCTGT TCTGATACTC TGCATAAAAA CATGTGTGTA TTCCAAAATC AGTTGTGTTC 179 CATGGTGACC ATCCTGATGG ATCGATGAAT GCATCAATGT TTGATTGCAT TATGATGGTC 76676 |||||||||| |||||||||| ||||| |||| |||| |||| |||||||||| |||||||||| CATGGTGACC ATCCTGATGG ATCGACGAAT CCATCGATGT TTGATTGCAT TATGATGGTC 239 TTGGAATACT CCTTCCATGG ACGTCCAATA TAGGCTT--- -T--T--AAT GGTGCTAGGG 76624 |||||| ||| |||||||||| |||||||| | ||| ||| | | | | || ||||| | TTGGAAAACT CCTTCCATGG ACGTCCAAGA TAGACTTGAC NTGGTGGATT GGCGCTAGTG 299 AACCCTGCCT GAGGCTTGAT GTCACAATTC TGGATAACTA ATCCAGAGGT ACTATCTTGT 76564 | ||| | || |||||| |||||||||| |||||||| | || | AGTGCTGGAT CAGCCTTGAT GTCACAATTC TGGATAACGA ATGTACCA.. .......... 347 TTATGTTAAG TAGTGGAGCC TGATTAATAT ATATAACTCT TTACGCAATT TCCGCGGTGA 76504 .......... .......... .......... .......... .......... .......... 347 GGTTACCGGG GGTTATGGGG GTGGGAGCCC CCCATCCGAA GGAGGGGTTC AGGGCAGCGA 76444 .......... .......... .......... .......... .......... .......... 347 CCCGACCTAA ATTTTAGGCT TTCCTATTTA TTCTCTATTT ATTCTCTGTA ACCAAAAAAA 76384 .......... .......... .......... .......... .......... .......... 347 CTCTGATTTA TTAATATAAA TATACCTCAC GACCGTGGAA GTTTACTCAC GGGGTGTTAC 76324 .......... .......... .......... .......... .......... .......... 347 CACAAAATAT TGGGTTTTCT CTTTCTAGAT CTCTCATCTC TTTCTTTTAA AAGTTCTTGT 76264 .......... .......... .......... .......... .......... .......... 347 GTTTTCATTC ATCTAGTGTG TGTGCTTTAA TTCGATCCTA ACAACTGGCA TCAGAGATAA 76204 .......... .......... .......... .......... .......... .......... 347 GGAGATACAA CACGATCACT GAAGATGGAT AGTTTGAAGC TTGGAATCGA GAAGTTTGAT 76144 .......... .......... .......... .......... .......... .......... 347 GGATCCGATT TTAGTTTCTG GAAGATGCAG ATCAAAGATT ATCTGTACCA GAAAGATCTT 76084 .......... .......... .......... .......... .......... .......... 347 CATAAACCGT TGACCAGGGT GAAACCGGAA TCCATGACGG AGGAGAAGTG GAAACTCAAG 76024 .......... .......... .......... .......... .......... .......... 347 GATCGCCAGG CTCTAGGGTT GATCCGGTTG ACTTTGTCAA GAAACGTGGC GTTCAACATT 75964 .......... .......... .......... .......... .......... .......... 347 GTGAAGACGT TCGGTCTGTT GAAGGAACTG TCAAACATGT ATGAAAAACC ATCGGCTATG 75904 .......... .......... .......... .......... .......... .......... 347 AACAAGGTAT ATTTGATGCG TAGATTGTTC AATTTACAGA TGTATGAGAA TGGATCTGTT 75844 .......... .......... .......... .......... .......... .......... 347 TCTGATCATA TAAACGAGTT TAATATGATT GTGAGTCAAC TCAATTCTGT GGATATCAAT 75784 .......... .......... .......... .......... .......... .......... 347 TTCGAAGATG AAATTAAGGC GTTGATTTTG TTGTCATCTC TGCCCGAGTC TTGGGATACT 75724 .......... .......... .......... .......... .......... .......... 347 ATTGTTGCTG CGATTCGCAG TTCCCGTGGA TCTGAGAAAC TGAAGTTTGA TAAAATCCAT 75664 .......... .......... .......... .......... .......... .......... 347 GATGTTGTTC TTAGCGAAAG TATTCACAAA TGAGAAGTGG GAAATTCATT GGGCAGTGCT 75604 .......... .......... .......... .......... .......... .......... 347 CTCAGCGTTG ATCGAAGGGG GAGAAGTAAG ACGAAAGGCC AAAATCAACA TGGTCGATCA 75544 .......... .......... .......... .......... .......... .......... 347 AAATCAAAGA ATCGAGAAAA ATCCCTGAAG ATCAAACGTG ACTTGTTGGA ACTGTAAAGA 75484 .......... .......... .......... .......... .......... .......... 347 AAAAGGGCAC TTTTAGACGA ACTATACAAA GCAAAAGAAG AAACAAAATC ACAAAATTTG 75424 .......... .......... .......... .......... .......... .......... 347 GAGATGACAA TGATTCTGTA AATTCATCAG AGGACATTGG GGATGCTCTA ATCCTTAGTG 75364 .......... .......... .......... .......... .......... .......... 347 TGAATAGCCC GGTTGAATCA TGGATTTTGG ATTCTGGTGC ATCTTTCCAT TCATCTTCAA 75304 .......... .......... .......... .......... .......... .......... 347 GCAAGGAGTT GTTCCAAAAT TTCAAATCTG GAAATTTTGG AAAAGTATAT CTTGTTGACA 75244 .......... .......... .......... .......... .......... .......... 347 ATAAAGCCTT AGAGATTGAA GGAAAGGGGG ATGTTTGCAT AAAGACCACC TCGGGAAACC 75184 .......... .......... .......... .......... .......... .......... 347 AATGGACATT GGAGGATGTC AGATATATTC CTGGGATCAA CAAAAAATTG ATCTCTGTCG 75124 .......... .......... .......... .......... .......... .......... 347 GTCAGTTGGA TAGCACGGGA TATGCAGCAG AGTTAGGGAA ATGTTCGTGG AAGATCATGA 75064 .......... .......... .......... .......... .......... .......... 347 AAGTTGCTAT GGTAGTAGCT CGTGGCACCA AATCTGGAAC CTTGTACACC ACTGCAGAGT 75004 .......... .......... .......... .......... .......... .......... 347 GTATAAACTA GGTCGCTGTT GCTGAAGGTG TTTCCGGTTC ATGTCTGTGG CACAACAGAC 74944 .......... .......... .......... .......... .......... .......... 347 TTGGACACAT GAGTACTAAA GGAATGAAGA TGTTGGTTGC AAAAGGAGAA TTAGAGGGTC 74884 .......... .......... .......... .......... .......... .......... 347 TGAAGTCTGT TGATATGGGT CTTTGCGAGA GCTGTGTTAT GGGAAAACAG AAAAGAGTAA 74824 .......... .......... .......... .......... .......... .......... 347 GCTTCACAAG GACTCCTAGA GAGCCAAAGA AAGTGCGGTT GGAAATGGTC CATATAGATG 74764 .......... .......... .......... .......... .......... .......... 347 TTTGGGGACC ATATCCAGTA TCATTACTTG GAGGATCCAG ATTCTATGTT ACCTTCATTG 74704 .......... .......... .......... .......... .......... .......... 347 ATGATTTCAG CAGGAAGGTA TCGGTTTACT TCTTGAAGCA TAAGTTAGAT GTGTTTGCAA 74644 ||||| .......... AAGGAA-... .......... .......... .......... .......... 353 CTTTCAAGAA GTGGAAAGCT GAAGTTGAGA ATCAGATCGG TTTGAAAGTC AAATGCCTAA 74584 .......... .......... .......... .......... .......... .......... 353 GGTCTGACAA TGGAGGAGAG TATGACAAAT CAGAGTTCAA GGCATTCTGT GCAGTTGACG 74524 .......... .......... .......... .......... .......... .......... 353 GAATCAGATT GATGAGAACA GTTCCTGGTG AGGCAAGGCA GAATAGAATT GTTGAGAGGA 74464 .......... .......... .......... .......... .......... .......... 353 TGAACAGAAC ATTGAATGAG CTTGAAAGGA GTATGAGGAT ACACTGTGGG CTGCCCAAAA 74404 .......... .......... .......... .......... .......... .......... 353 CACTTTGGGC GGATGTTGTG AGCAAAGTTG CATACTTGAT CAATAGGGGA CCATCAGTTC 74344 .......... .......... .......... .......... .......... .......... 353 CTTTAGGGTT CAAGATTCCA GAGGAGGTGT GGACAGGAAA AGAACTTAAG TACTCACACT 74284 .......... .......... .......... .......... .......... .......... 353 TGAGGACTTT TGGTTGCACT TGTTATGTTC ATGTTGATCC AGAAAAGAGA GACAAGCCTG 74224 .......... .......... .......... .......... .......... .......... 353 ATGCCAAGGC TGTGAAGTGT TACTTCATAG GCTATGGTTC TCATTTGTTT GGTTACAGAT 74164 .......... .......... .......... .......... .......... .......... 353 TTAGGGATGA CAAGAACAGA TCCTGAGACA TTGTGACGTG ACATTTGATG AGTCTGTCAT 74104 .......... .......... .......... .......... .......... .......... 353 GTACAAGGAC AAAGAGCAGA AGATTCTAGA GATTACAAAT CAAGTGGCAG TTGAGGTTGA 74044 .......... .......... .......... .......... .......... .......... 353 GTTGGAGAAG AGAAACCCCA TAGATGTCGA AGCAAATACT CAACCAACTC CTACTGAAGA 73984 .......... .......... .......... .......... .......... .......... 353 ATCTGGAGTG GAGCAAGTTA CACCTGAGCA GGTGTTAAGG AGATCATCTA GATCCATGAG 73924 .......... .......... .......... .......... .......... .......... 353 GGCACCAGAT ACGTATTCAC CTTCATTACA CTATCTATTG TTGACTGATG AGAGAGAACC 73864 .......... .......... .......... .......... .......... .......... 353 AGAGTCTTTT GATGAGGCCC TACAGGTGGA GGATTCGATC AAGTGGGAGC AAGCCATGGA 73804 .......... .......... .......... .......... .......... .......... 353 TGATGAGAGG AGGTCACTTG AGAAGATCGA CACATGGGTG TTGACTAAGT TATCTGCAAG 73744 .......... .......... .......... .......... .......... .......... 353 GAAGAGAGCT TTGTTAAATA AGTGGGTGTT CAGAATCAAG AGTGAACCAG ATGGCAAAAG 73684 .......... .......... .......... .......... .......... .......... 353 AAGGTTCAAG GCTCGTTTAG TGGTTAAAGG ATATTCACAA AGGAAAGGTA TTGATTATGC 73624 .......... .......... .......... .......... .......... .......... 353 TTAAATATTT TCTTCTGTTG TGAAGTTAGC CTCTATTCGA ATTCTGTTGA GTGTTGTTGC 73564 .......... .......... .......... .......... .......... .......... 353 ATCGGAGAAT TTGCATCTAG AGCATATGGA TGTAAAAACA GTGTTTTTAT ATGGAGATAT 73504 .......... .......... .......... .......... .......... .......... 353 GGACAAAGAG ATCTATATGC AGCAACCGGA AGGATTTGTA GTTCCAGGCA AGGAACACAT 73444 .......... .......... .......... .......... .......... .......... 353 GGTGTGCAAG CTCACCAGGA GCTTGTATGG ACTAAAGCAA GCACCAAGGC AGTGGTACAA 73384 .......... .......... .......... .......... .......... .......... 353 GAAGTTTAAC TCCTTCATGA CCAAGGGTGG ATTCTGCAAA GCTGAAAAGG ATCCTTGTTG 73324 .......... .......... .......... .......... .......... .......... 353 TTACTTCAAG AAATACACTG ATTCATATGT CGTTCTACTC TTGTATATGG ATGATATGTT 73264 .......... .......... .......... .......... .......... .......... 353 GATTGTAAGA TCTAGTATGA GAGAGATTAA CAATCTGAAG ACAAGGTTGT CTACAGCATT 73204 .......... .......... .......... .......... .......... .......... 353 TGAGATGACA GATTTGGGTC CAGCAAAATA GATTTTGGGG ATGGAGATTT CTCGGGATAG 73144 .......... .......... .......... .......... .......... .......... 353 ATCTGTTGGC ACTTTAAATC TATCTCAGAA GTTGTACATT GAGAAGGTAC TGAGCAGATT 73084 .......... .......... .......... .......... .......... .......... 353 CAGGGTTAAT GATGCTAAAC CCAGGACTAC TCCATTGGCA AATCACTTTA AATTGTCAAA 73024 .......... .......... .......... .......... .......... .......... 353 GGAGCAGTCA CCCAAGACTT CCGAGGAGCG TGATCACATG GCACTTGTTC CATATGCTTC 72964 .......... .......... .......... .......... .......... .......... 353 AGCAGTTGGT AGTTTGATGT ATGTTATAGT CTGCACTAGA CCTGATATAC CACATGCATT 72904 .......... .......... .......... .......... .......... .......... 353 GGGAGTTGTT ACCAGGTACA TGGCGAACCC TGGGAAAGAG AATTGGGAAG GTGTGAAGTG 72844 .......... .......... .......... .......... .......... .......... 353 GCTTCTGAGA TATCTGAGAG GTACATCCAG TAGTTCACTT TGTTTTGGAA AAGGCGAGGT 72784 .......... .......... .......... .......... .......... .......... 353 GACTCTACAG GGTTTTGTGG ATGCTGATCT TGGTGGGGAT ATTGACTCGA GCAAGAGTAC 72724 .......... .......... .......... .......... .......... .......... 353 ATCCGGGTAC ATTTACACCA TAGGTGGAAC AGCAATGAGT TGGATGTCCA GGCTTCAGAA 72664 .......... .......... .......... .......... .......... .......... 353 TTTGTATTTC TCTTTCATCT ACTGAAGCTG AGTATGTGGC ATAGCTGAAG TTGGGAAAGA 72604 .......... .......... .......... .......... .......... .......... 353 GATGATATGG CTGGTAGATT ATCTTAAGGA ATTGGGCAAG AAGCAGAGCG AGAAGATTCT 72544 .......... .......... .......... .......... .......... .......... 353 TTACTCAGAT AGCCAGAGTG CCATGCAGTT GGTGAAAAAT CCAGTCTATC ATTCGAAGAC 72484 .......... .......... .......... .......... .......... .......... 353 AAAGCACATC AGAAGGCGAT ACCATTTCAC TCGCAGGGCA GTGGAGGATG GTGAAATGTG 72424 .......... .......... .......... .......... .......... .......... 353 CTTGGAGAAG ATAGAGGGTG CAAAGAACCC GGCAGACATG TTGATGAAAT GTGTTGATGT 72364 .......... .......... .......... .......... .......... .......... 353 TAGGAAACTA AGGTTATGTA AAACCTCGGT TGGTCTTCTG TAGTTGTTGC TACAGATGTT 72304 | || .......... .......... .......... .......... ...TCTTT.. .......... 358 TCGGTGTGGT AAAGATGTTG ATGATGAAGA GATTTTTTTT TGAGAATGTA TTTTTTGGAT 72244 .......... .......... .......... .......... .......... .......... 358 GATTGAGTCA GTCTCAAAGT GGGAGAATTG TAAGGTAGTG GAGCCTGATT AATGTTAGGA 72184 .......... .......... .......... .......... .......... .......... 358 TTTCCTATTT ATTCTCTATT TTAGGCTTTC CTATTTATTC TCTGTAACCA AAAATACTCT 72124 .......... .......... .......... .......... .......... .......... 358 GATTTATTAA TATAAATATA CCTCACCGCC TTAGAATTTT ACTTACGGGT TGTTACCATG 72064 .......... .......... .......... .......... .......... .......... 358 AAATATTGGG TTTTCTCTTT CTCTCTCTAG ATCTCTCATC TCTTTCTCTT GAAAGTTCTT 72004 .......... .......... .......... .......... .......... .......... 358 GTGTTCTTCA TTCATCTAGT GTGTGTGCGT GAATTCGATC CTAACAGTTT AGACTTTCCT 71944 | | | ||||| .......... .......... .......... .......... .......TCT CATCCTTCCT 371 TGAGAAGTGA CCATGCAAGC TTGTGTATCA CCTGGTTTCC TCACAATCAA TTGGCAGTTT 71884 |||| ||||| ||||||||| ||| || | |||||||||| |||||||||| || ||||||| TGAGCAGTGA TCATGCAAGC TTGATTAGGA CCTGGTTTCC TCACAATCAA TTTGCAGTTT 431 TGG-----A- -A---GCATC ACTAAAAATG AAATCAATGT TGCCTGTAAT GATAGAGTCA 71834 ||| | | ||||| || ||| | | ||||||||| |||||||||| | || | ||| TGGAAAACAG CACTTGCATC ACCAAACAAG AAATCAATGG TGCCTGTAAT GGTACAATCA 491 CGGAACAATT ATCTGTACGA GTGAGCGTAT AGGATGTATT GGAAACCATC GATTTTGTAG 71774 || | |||| ||| || |||||||||| | ||| || || ||||||| ||| ||| || CGATAAAATT GTCTTCCTGA GTGAGCGTAT AACGTGTCTT GGTAACCATC GATATTGCAG 551 TTGTAGACAA TTGCTTTATC ATCATTAATC CTCAATGCAA CAACTTGTTC TTTTACTGGT 71714 ||||||| || || |||| ||||||| |||||||||| | ||||||| |||| ||| TTGTAGAGAA CAGCCCTATC GGCATTAATT CTCAATGCAA CGGCTTGTTC TTTTGTGGGT 611 CCTGCTCTGT TTTCAATACC GATGTCCCTG ATAACGAACC TTTCACCAGA AACACCAAGG 71654 |||||| ||| |||||||||| |||||| | |||||||| | |||||| | |||||||||| CCTGCTGTGT TTTCAATACC CATGTCCTTC ATAACGAAAC CATCACCACA AACACCAAGG 671 GAGGTTGTAT GCCATTTTAC TACACCGCCA CCATTCTTAC TCCCTTGTCA CCCAGTGACA 71594 | || ||||| ||||| || || || | | | |||| | ||| |||| || GTGGCTGTAT GCCATGTTGA TATACGGTTA GGA--ATTAC TGCCTGGTCA CCGG...... 723 GTGGCGGTAG CCATAAATTT CACAAAGAGT GTCCAAAAAT TGTATAGGGG TATATTTTTT 71534 .......... .......... .......... .......... .......... .......... 723 CTTTTGGATG AATGAGTGCA CTAGAAATTT TAAAAATTAA AGTACGTAAT ATACATGAAA 71474 .......... .......... .......... .......... .......... .......... 723 ATTTTTGGAA AGAAAAGATG AAAAGATGAA TGAGTGGACT AGAAAATTTA AAAATTAAAC 71414 .......... .......... .......... .......... .......... .......... 723 TATGTAGTAT ACATGAAATT TGTGGGGGGG GGGGGGGATA CCAAATATAT ATGAATTTTT 71354 .......... .......... .......... .......... .......... .......... 723 TTTTTAAAAA AACGAGGAAA AGCTACTGCT AGGGAAATTT GAACTCACAA GCGCTTAAAT 71294 .......... .......... .......... .......... .......... .......... 723 GTTTGGCTCT TTCAAGACAA CTTAAACCAC TAGGCTGCAC CTTAAACCAC TAGGCTACAC 71234 .......... .......... .......... .......... .......... .......... 723 CTTGTTGTGT TAAGGGTGTC CAAAATAAAT TAGTTAACCA TTTTGTATAT TATTTTACTT 71174 .......... .......... .......... .......... .......... .......... 723 GTATATACTA TGTAATTTAC CGACGAAGGG TGTCCAATAG TATATAGCTA CGCCCCTGCC 71114 .......... .......... .......... .......... .......... .......... 723 TAGTGATTAT GGTCTTGGTT GGCCCTTCAC CAATAAACAC AACATTT-GC CTG-TCTTTT 71056 ||||||| |||||||||| || ||||||| |||||||||| ||||||| || || |||||| ...TGATTAT GGTCTTGGTT GGGCCTTCAC CAATAAACAC AACATTTAGC ATGTTCTTTT 780 CAATTTCAAT GTGTTCCTTG TATGTACCGG CCTTGATCAG GATAATGAAA GGAGTTGTAT 70996 | |||||||| |||||||||| |||||||| | |||||||||| ||||| |||| ||||||| | CGATTTCAAT GTGTTCCTTG TATGTACCCG CCTTGATCAG GATAACGAAA GGAGTTGGAC 840 AGTTCATGAG GACAGCGTTA AGTTC-TCCT GAAATGGTCT TGTATTGTCC GTCACCACTT 70937 | || || | |||||| | | ||| | |||| | |||||||| |||||||||| | | ||||| TGCTCCTGGG GACAGCTTGA AGTGCTTCCT G-AATGGTCT TGTATTGTCC GCCTCCACTG 899 GCAGAAACCA CAGCATTAGG CTTGGAGGGA GAAATTTGAA GGAGCTTATG GCTACTGGCT 70877 |||||||||| |||||||||| |||||||| | |||||||||| |||||| | | | |||||||| GCAGAAACCA CAGCATTAGG CTTGGAGGCA GAAATTTGAA GGAGCTGACG GTTACTGGCT 959 TCAACAAA 70869 || ||||| TCGACAAA 967 hqPGS_C01HBa0163B20.1-_SGN-E378571- (76914 76576,74693 74687,72320 72316,71956 71600,71110 70869) ******************************************************************************** EST sequence 39 -strand 682 n (File: SGN-E374055-) 1 GATTGGCGCT AGTGAGTGCT GGATCAGCCT TGATGTCACA ATTCTGGATA ACGAATGTAC 61 CAAAGGAATC TTTTCTCATC CTTCCTTGAG CAGTGATCAT GCAAGCTTGA TTAGGACCTG 121 GTTTCCTCAC AATCAATTTG CAGTTTTGGA AAACAGCACT TGCATCACCA AACAAGAAAT 181 CAATGGTGCC TGTAATGGTA CAATCACGAT AAAATTGTCT TCCTGAGTGA GCGTATAACG 241 TGTCTTGGTA ACCATCGATA TTGCAGTTGT AGAGAACAGC CCTATCGGCA TTAATTCTCA 301 ATGCAACGGC TTGTTCTTTT GTGGGTCCTG CTGTGTTTTC AATACCCATG TCCTTCATAA 361 CGAAACCATC ACCACAAACA CCAAGGGTGG CTGTATGCCA TGTTGATATA CGGTTAGGAA 421 TTACTGCCTG GTCACCGGTG ATTATGGTCT TGGTTGGGCC TTCACCAATA AACACAACAT 481 TTAGCATGTT CTTTTCGATT TCAATGTGTT CCTTGTATGT ACCCGCCTTG ATCAGGATAA 541 CGAAAGGAGT TGGACTGCTC CTGGGGACAG CTTGAAGTGC TTCCTGAATG GTCTTGTATT 601 GTCCGCCTCC ACTGGCAGAA ACCACAGCAT TAGGCTTGGA GGCAGAAATT TGAAGGAGCT 661 TACGGTTACT GGCTTCGACA AA Predicted gene structure (within gDNA segment 76091 to 70089): Exon 1 71948 71600 ( 349 n); cDNA 82 438 ( 357 n); score: 0.734 Intron 1 71599 71111 ( 489 n); Pd: 0.000 (s: 0.66), Pa: 0.000 (s: 0.91) Exon 2 71110 70869 ( 242 n); cDNA 439 682 ( 244 n); score: 0.878 MATCH C01HBa0163B20.1- SGN-E374055- 0.793 591 0.867 C PGS_C01HBa0163B20.1-_SGN-E374055- (71948 71600,71110 70869) Alignment (genomic DNA sequence = upper lines): TTCCTTGAGA AGTGACCATG CAAGCTTGTG TATCACCTGG TTTCCTCACA ATCAATTGGC 71889 ||||||||| ||||| |||| |||||||| || |||||| |||||||||| ||||||| || TTCCTTGAGC AGTGATCATG CAAGCTTGAT TAGGACCTGG TTTCCTCACA ATCAATTTGC 141 AGTTTTGG-A AGCATCAC-T -----A--AA A-ATGAAATC AATGTTGCCT GTAATGATAG 71839 |||||||| | | || ||| | | || | | |||||| |||| ||||| |||||| || AGTTTTGGAA AACAGCACTT GCATCACCAA ACAAGAAATC AATGGTGCCT GTAATGGTAC 201 AGTCACGGAA CAATTATCTG TACGAGTGAG CGTATAGGAT GTATTGGAAA CCATCGATTT 71779 | ||||| | |||| ||| ||||||| |||||| | || |||| || |||||||| | AATCACGATA AAATTGTCTT CCTGAGTGAG CGTATAACGT GTCTTGGTAA CCATCGATAT 261 TGTAGTTGTA GACAATTGCT TTATCATCAT TAATCCTCAA TGCAACAACT TGTTCTTTTA 71719 || ||||||| || || || |||| ||| |||| ||||| |||||| || ||||||||| TGCAGTTGTA GAGAACAGCC CTATCGGCAT TAATTCTCAA TGCAACGGCT TGTTCTTTTG 321 CTGGTCCTGC TCTGTTTTCA ATACCGATGT CCCTGATAAC GAACCTTTCA CCAGAAACAC 71659 |||||||| | |||||||| ||||| |||| || | ||||| ||| | ||| ||| |||||| TGGGTCCTGC TGTGTTTTCA ATACCCATGT CCTTCATAAC GAAACCATCA CCACAAACAC 381 CAAGGGAGGT TGTATGCCAT TTTACTACAC CGCCACCATT CTTACTCCCT TGTCACCCAG 71599 |||||| || |||||||||| || || || | | | ||||| ||| |||||| CAAGGGTGGC TGTATGCCAT GTTGATATAC GGTTAGGA-- ATTACTGCCT GGTCACCGG. 438 TGACAGTGGC GGTAGCCATA AATTTCACAA AGAGTGTCCA AAAATTGTAT AGGGGTATAT 71539 .......... .......... .......... .......... .......... .......... 438 TTTTTCTTTT GGATGAATGA GTGCACTAGA AATTTTAAAA ATTAAAGTAC GTAATATACA 71479 .......... .......... .......... .......... .......... .......... 438 TGAAAATTTT TGGAAAGAAA AGATGAAAAG ATGAATGAGT GGACTAGAAA ATTTAAAAAT 71419 .......... .......... .......... .......... .......... .......... 438 TAAACTATGT AGTATACATG AAATTTGTGG GGGGGGGGGG GGATACCAAA TATATATGAA 71359 .......... .......... .......... .......... .......... .......... 438 TTTTTTTTTT AAAAAAACGA GGAAAAGCTA CTGCTAGGGA AATTTGAACT CACAAGCGCT 71299 .......... .......... .......... .......... .......... .......... 438 TAAATGTTTG GCTCTTTCAA GACAACTTAA ACCACTAGGC TGCACCTTAA ACCACTAGGC 71239 .......... .......... .......... .......... .......... .......... 438 TACACCTTGT TGTGTTAAGG GTGTCCAAAA TAAATTAGTT AACCATTTTG TATATTATTT 71179 .......... .......... .......... .......... .......... .......... 438 TACTTGTATA TACTATGTAA TTTACCGACG AAGGGTGTCC AATAGTATAT AGCTACGCCC 71119 .......... .......... .......... .......... .......... .......... 438 CTGCCTAGTG ATTATGGTCT TGGTTGGCCC TTCACCAATA AACACAACAT TT-GCCTG-T 71061 || |||||||||| ||||||| || |||||||||| |||||||||| || || || | ........TG ATTATGGTCT TGGTTGGGCC TTCACCAATA AACACAACAT TTAGCATGTT 490 CTTTTCAATT TCAATGTGTT CCTTGTATGT ACCGGCCTTG ATCAGGATAA TGAAAGGAGT 71001 |||||| ||| |||||||||| |||||||||| ||| |||||| |||||||||| ||||||||| CTTTTCGATT TCAATGTGTT CCTTGTATGT ACCCGCCTTG ATCAGGATAA CGAAAGGAGT 550 TGTATAGTTC ATGAGGACAG CGTTAAGTTC -TCCTGAAAT GGTCTTGTAT TGTCCGTCAC 70942 || | | || || |||||| | | |||| | ||||| ||| |||||||||| |||||| | | TGGACTGCTC CTGGGGACAG CTTGAAGTGC TTCCTG-AAT GGTCTTGTAT TGTCCGCCTC 609 CACTTGCAGA AACCACAGCA TTAGGCTTGG AGGGAGAAAT TTGAAGGAGC TTATGGCTAC 70882 |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| ||| || ||| CACTGGCAGA AACCACAGCA TTAGGCTTGG AGGCAGAAAT TTGAAGGAGC TTACGGTTAC 669 TGGCTTCAAC AAA 70869 ||||||| || ||| TGGCTTCGAC AAA 682 hqPGS_C01HBa0163B20.1-_SGN-E374055- (71948 71600,71110 70869) ******************************************************************************** EST sequence 4 -strand 558 n (File: SGN-E331580-) 1 ATGACTTGAG GTCATCCACT ATATCCTTCA TCTTTGAGAA ATCAAAGTTC TCAATCCTAG 61 CGATAGAGCC CCTTAGTTCC TCAACGGCTA GATCAAACAC CTCTTCACAA GCAAGGAGAG 121 CGTCTTTGGT GTAAGGATCA CTGGCAGCTT TCTTAACTGG CTCAGTGTTC TTGATGGCAT 181 TCTTGATGTC TGCCACAGTG GCTTCGAATG CAACCTTGAT GTAGTCCTTT GGATCGGACA 241 CATTCTTTGC TGCGGAGAGG GTCTTTTCAC AAGTTTGTTT GTATGGTGTG GGTTGACACA 301 TAGATTCAAC TGACTTTGTT GAAGTTGCAA CTCCATTTGA TGATGTATCA GAATCATGTT 361 TAGTCAGGGT GACACAGGCT GCCACCACAC AAGCCACCAC AAGAACAGAA GCTATTCCAC 421 CAATTACCAC CTTCTTTGTC ATTTTTTTGG TTTTTTGATT TTTTTGGATT TTTTTTATGG 481 GGGGAGTTCC CTATGAAACA ACCCCTATGG TTCTTCTTGT AAGTGAAGAA CTCAGAGGGG 541 TTTTATTGAA GGCTGTGT Predicted gene structure (within gDNA segment 72370 to 68669): Exon 1 70600 70518 ( 83 n); cDNA 117 198 ( 82 n); score: 0.904 MATCH C01HBa0163B20.1- SGN-E331580- 0.904 83 0.149 C PGS_C01HBa0163B20.1-_SGN-E331580- (70600 70518) Alignment (genomic DNA sequence = upper lines): AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA TCGGCTCGGT GTTTTTTGAG 70541 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || ||| || || AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA CTGGCTCAGT GTTCTT-GAT 175 GTCATTCTTG ATGTCTGACA CAG 70518 | |||||||| ||||||| || ||| GGCATTCTTG ATGTCTGCCA CAG 198 hqPGS_C01HBa0163B20.1-_SGN-E331580- (70600 70518) ******************************************************************************** EST sequence 129 -strand 584 n (File: SGN-E333295-) 1 ATAAGCAACG ACAGCGCTAA GCCATGACTT GAGGTCATCC ACTATATCNT TCATCTTTGA 61 GAAATCAAAG TTCTCAATCC TAGCGATAGA GCCCNTTAGT TCCTCAACGG CTAGATCAAA 121 CACCTCTTCA CAAGCAAGGA GAGCGTCTTT GGTGTAAGGA TCACTGGCAG CTTTCTTAAC 181 TGGCTCAGTG TTCTTGATGG CATTCTTGAT GTCTGCCACA GTGGCTTCGA ATGCAACCTT 241 GATGTAGTCC TTTGGATCGG ACACATTCTT TGCTGCGGAG AGGGTCTTTT CACAAGTTTG 301 TTTGTATGGT GTGGGTTGAC ACATAGATTC AACTGACTTT GTTGAAGTTG CAACTCCATT 361 TGATGATGTA TCAGAATCAT GTTTAGTCAG GGTGACACAG GCTGCCACCA CACAAGCCAC 421 CACAAGAACA GAAGCTATTC CACCAATTAC CACCTTCTTT GTCATTTTTT TGGTTTTTTG 481 ATTTTTTTGG ATTTTTTTTA TGGGGGGAGT TCCCTATGAA ACAACCCCTA TGGTTCTTCT 541 TGTAAGTGAA GAACTCAGAG GGGTTTTATT GAAGGCTGTG TTTA Predicted gene structure (within gDNA segment 72600 to 68639): Exon 1 70600 70518 ( 83 n); cDNA 140 221 ( 82 n); score: 0.904 MATCH C01HBa0163B20.1- SGN-E333295- 0.904 83 0.142 C PGS_C01HBa0163B20.1-_SGN-E333295- (70600 70518) Alignment (genomic DNA sequence = upper lines): AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA TCGGCTCGGT GTTTTTTGAG 70541 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || | || |||| AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA CTGGCTCAGT G-TTCTTGAT 198 GTCATTCTTG ATGTCTGACA CAG 70518 | |||||||| ||||||| || ||| GGCATTCTTG ATGTCTGCCA CAG 221 hqPGS_C01HBa0163B20.1-_SGN-E333295- (70600 70518) ******************************************************************************** EST sequence 192 -strand 576 n (File: SGN-E330071-) 1 CATAAGCAAC GACAGCGCTA AGCCATGACT TGAGGTCATC CACTATATCC TTCATCTTTG 61 AGAAATCAAA GTTCTCAATC CTAGCGATAG AGCCCCTTAG TTCCTCAACG GCTAGATCAA 121 ACACCTCTTC ACAAGCAAGG AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA 181 CTGGCTCAGT GTTCTTGATG GCATTCTTGA TGTCTGCCAC AGTGGCTTCG AATGCAACCT 241 TGATGTAGTC CTTTGGATCG GACACATTCT TTGCTGCGGA GAGGGTCTTT TCACAAGTTT 301 GTTTGTATGG TGTGGGTTGA CACATAGATT CAACTGACTT TGTTGAAGTT GCAACTCCAT 361 TTGATGATGT ATCAGAATCA TGTTTAGTCA GGGTGACACA GGCTGCCACC ACACAAGCCA 421 CCACAAGAAC AGAAGCTATT CCACCAATTA CCACCTTCTT TGTCATTTTT TTGGTTTTTT 481 GATTTTTTTG GATTTTTTTT ATGGGGGGAG TTCCCTATGA AACAACCCCT ATGGTTCTTC 541 TTGTAAGTGA AGAACTCAGA GGGGTTTTAT TGAAGG Predicted gene structure (within gDNA segment 72610 to 68729): Exon 1 70600 70518 ( 83 n); cDNA 141 222 ( 82 n); score: 0.904 MATCH C01HBa0163B20.1- SGN-E330071- 0.904 83 0.144 C PGS_C01HBa0163B20.1-_SGN-E330071- (70600 70518) Alignment (genomic DNA sequence = upper lines): AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA TCGGCTCGGT GTTTTTTGAG 70541 |||||||||| |||||||||| |||||||||| |||||||||| ||||| || | || |||| AGAGCGTCTT TGGTGTAAGG ATCACTGGCA GCTTTCTTAA CTGGCTCAGT G-TTCTTGAT 199 GTCATTCTTG ATGTCTGACA CAG 70518 | |||||||| ||||||| || ||| GGCATTCTTG ATGTCTGCCA CAG 222 hqPGS_C01HBa0163B20.1-_SGN-E330071- (70600 70518) ******************************************************************************** EST sequence 86 -strand 658 n (File: SGN-E332650-) 1 CAAGGGTGGC TGTATGCCAT GTTGATATAC GGTTAGGAAC TACTGCCTGG TCACCGGTGA 61 TTATGGTCTT GGTTGGGCCT TCACCAATAA GCACAACATT TAGCATGTTC TTTTCGATTT 121 GAATGTGTTC CTTGTATGTA CCCGCCTTGA TCAGGATAAC GAAAGGAGTT GGACTGCTCT 181 TGGGGACAGC TTGAAGTGCT TCCTGAATGG TCTTGTATTG TCCGCCTCCA CTGGCAGAAA 241 CCACAGCATT AGGCTTGGAG GCAGAAATTT GAAGGAGCTT ACGATTACTG GCTTCGACAA 301 ATGAGTCACT GTTTGATAAC AATTTGCGGG TAAGGCCTGT GTTTTGTGTG ATCATTTCAC 361 CGAAGCTGTT GACCATGGAA AGAGCATTGC TACTCAGCTC CCGAGTGGTG CTCATTAGCT 421 TCATCATTTC GTCACGGGTT GCACTGTATT CTGATTTGGT GAAACCATCT AAACAAGTCT 481 CTTCATAAGC AACGACAGCG TTAAGCCATG ACTTGAGGTC ATCCACTATA TCCTTCATCT 541 TAGAGAAATC AAAGTTCTCA ATCCTAGCGA TAGAGCCCCT TAGTTCCTCA ACGGCTAGAT 601 CAAACACCTC TTCACAAGCA AGGAGAGCGT CTTTGGTGTA AGGATCACTA GCAGCTTT Predicted gene structure (within gDNA segment 72868 to 66519): Exon 1 71110 70591 ( 520 n); cDNA 58 581 ( 524 n); score: 0.844 MATCH C01HBa0163B20.1- SGN-E332650- 0.844 520 0.790 C PGS_C01HBa0163B20.1-_SGN-E332650- (71110 70591) Alignment (genomic DNA sequence = upper lines): TGATTATGGT CTTGGTTGGC CCTTCACCAA TAAACACAAC ATTT-GCCTG -TCTTTTCAA 71053 |||||||||| ||||||||| |||||||||| ||| |||||| |||| || || ||||||| | TGATTATGGT CTTGGTTGGG CCTTCACCAA TAAGCACAAC ATTTAGCATG TTCTTTTCGA 117 TTTCAATGTG TTCCTTGTAT GTACCGGCCT TGATCAGGAT AATGAAAGGA GTTGTATAGT 70993 ||| |||||| |||||||||| ||||| |||| |||||||||| || ||||||| |||| | | TTTGAATGTG TTCCTTGTAT GTACCCGCCT TGATCAGGAT AACGAAAGGA GTTGGACTGC 177 TCATGAGGAC AGCGTTAAGT TC-TCCTGAA ATGGTCTTGT ATTGTCCGTC ACCACTTGCA 70934 || || |||| ||| | |||| | ||||| | |||||||||| |||||||| | ||||| ||| TCTTGGGGAC AGCTTGAAGT GCTTCCTG-A ATGGTCTTGT ATTGTCCGCC TCCACTGGCA 236 GAAACCACAG CATTAGGCTT GGAGGGAGAA ATTTGAAGGA GCTTATGGCT ACTGGCTTCA 70874 |||||||||| |||||||||| ||||| |||| |||||||||| ||||| | | ||||||||| GAAACCACAG CATTAGGCTT GGAGGCAGAA ATTTGAAGGA GCTTACGATT ACTGGCTTCG 296 ACAAACCAGT CACTATTTGA TAACAATTTG CGGGTAAGGC CAGTGGTTTT TGTGATCGTT 70814 ||||| ||| |||| ||||| |||||||||| |||||||||| | ||| ||| ||||||| || ACAAATGAGT CACTGTTTGA TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT 356 TCACCGAAAA CTGTTGGCCA TGGAAAGAGC ATTGATACTC AGCT--C-TT TCGTATTCAA 70757 |||||| || |||||| ||| |||||||||| |||| ||||| |||| | | || ||| TCACCG-AAG CTGTTGACCA TGGAAAGAGC ATTGCTACTC AGCTCCCGAG TGGTGCTCAT 415 TATCTTCATC ATTTTGTTGT GGGTTGCACT CTGTTCTGAT TTGATAAAAC CATCTGAGCA 70697 || ||||||| |||| || |||||||||| | ||||||| ||| | |||| ||||| | || TAGCTTCATC ATTTCGTCAC GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA 475 AGTCTCTTCA TAGGCAATCA CAGTGCTAAG CCATGTCTTG AGGTCTTCCA CCACATCCTT 70637 |||||||||| || |||| | ||| | |||| ||||| |||| ||||| |||| | | |||||| AGTCTCTTCA TAAGCAACGA CAGCGTTAAG CCATGACTTG AGGTCATCCA CTATATCCTT 535 GATCTTAGAG AAATCAAAGT TCTCAATCTT AGCGATAGAG CGTCTT 70591 ||||||||| |||||||||| |||||||| | |||||||||| | ||| CATCTTAGAG AAATCAAAGT TCTCAATCCT AGCGATAGAG CCCCTT 581 hqPGS_C01HBa0163B20.1-_SGN-E332650- (71110 70591) ******************************************************************************** EST sequence 140 -strand 650 n (File: SGN-E334236-) 1 GCTGTATGCC ATGTTGATAT ACGGTTAGGA ACTACTGCCT GGTCACCGGT GATTATGGTC 61 TTGGTTGGGC CTTCACCAAT AAGCACAACA TTTAGCATGT TCTTTTCGAT TTGAATGTGT 121 TCCTTGTATG TACCCGCCTT GATCAGGATA ACGAAAGGAG TTGGACTGCT CTTGGGGACA 181 GCTTGAAGTG CTTCCTGAAT GGTCTTGTAT TGTCCGCCTC CACTGGCAGA AACCACAGCA 241 TTAGGCTTGG AGGCAGAAAT TTGAAGGAGC TTACGATTAC TGGCTTCGAC AAATGAGTCA 301 CTGTTTGATA ACAATTTGCG GGTAAGGCCT GTGTTTTGTG TGATCATTTC ACCGAAGCTG 361 TTGACCATGG AAAGAGCATT GCTACTCAGC TCCCGAGTGG TGCTCATTAG CTTCATCATT 421 TCGTCACGGG TTGCACTGTA TTCTGATTTG GTGAAACCAT CTAAACAAGT CTCTTCATAA 481 GCAACGACAG CGCTAAGCCA TGACTTGAGG TCATCCACTA TATCCTTCAT CTTAGAGAAA 541 TCAAAGTTCT CAATCCTAGC GATAGAGCCC CTTAGTTCCT CAACGGCTAG ATCAAACACC 601 TCTTCACAAG CAAGGAGAGC GTCTTTGGTG TAAGGATCAC TAGCAGCTTT Predicted gene structure (within gDNA segment 72788 to 66519): Exon 1 71110 70591 ( 520 n); cDNA 50 573 ( 524 n); score: 0.846 MATCH C01HBa0163B20.1- SGN-E334236- 0.846 520 0.800 C PGS_C01HBa0163B20.1-_SGN-E334236- (71110 70591) Alignment (genomic DNA sequence = upper lines): TGATTATGGT CTTGGTTGGC CCTTCACCAA TAAACACAAC ATTT-GCCTG -TCTTTTCAA 71053 |||||||||| ||||||||| |||||||||| ||| |||||| |||| || || ||||||| | TGATTATGGT CTTGGTTGGG CCTTCACCAA TAAGCACAAC ATTTAGCATG TTCTTTTCGA 109 TTTCAATGTG TTCCTTGTAT GTACCGGCCT TGATCAGGAT AATGAAAGGA GTTGTATAGT 70993 ||| |||||| |||||||||| ||||| |||| |||||||||| || ||||||| |||| | | TTTGAATGTG TTCCTTGTAT GTACCCGCCT TGATCAGGAT AACGAAAGGA GTTGGACTGC 169 TCATGAGGAC AGCGTTAAGT TC-TCCTGAA ATGGTCTTGT ATTGTCCGTC ACCACTTGCA 70934 || || |||| ||| | |||| | ||||| | |||||||||| |||||||| | ||||| ||| TCTTGGGGAC AGCTTGAAGT GCTTCCTG-A ATGGTCTTGT ATTGTCCGCC TCCACTGGCA 228 GAAACCACAG CATTAGGCTT GGAGGGAGAA ATTTGAAGGA GCTTATGGCT ACTGGCTTCA 70874 |||||||||| |||||||||| ||||| |||| |||||||||| ||||| | | ||||||||| GAAACCACAG CATTAGGCTT GGAGGCAGAA ATTTGAAGGA GCTTACGATT ACTGGCTTCG 288 ACAAACCAGT CACTATTTGA TAACAATTTG CGGGTAAGGC CAGTGGTTTT TGTGATCGTT 70814 ||||| ||| |||| ||||| |||||||||| |||||||||| | ||| ||| ||||||| || ACAAATGAGT CACTGTTTGA TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT 348 TCACCGAAAA CTGTTGGCCA TGGAAAGAGC ATTGATACTC AGCT--C-TT TCGTATTCAA 70757 |||||| || |||||| ||| |||||||||| |||| ||||| |||| | | || ||| TCACCG-AAG CTGTTGACCA TGGAAAGAGC ATTGCTACTC AGCTCCCGAG TGGTGCTCAT 407 TATCTTCATC ATTTTGTTGT GGGTTGCACT CTGTTCTGAT TTGATAAAAC CATCTGAGCA 70697 || ||||||| |||| || |||||||||| | ||||||| ||| | |||| ||||| | || TAGCTTCATC ATTTCGTCAC GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA 467 AGTCTCTTCA TAGGCAATCA CAGTGCTAAG CCATGTCTTG AGGTCTTCCA CCACATCCTT 70637 |||||||||| || |||| | ||| |||||| ||||| |||| ||||| |||| | | |||||| AGTCTCTTCA TAAGCAACGA CAGCGCTAAG CCATGACTTG AGGTCATCCA CTATATCCTT 527 GATCTTAGAG AAATCAAAGT TCTCAATCTT AGCGATAGAG CGTCTT 70591 ||||||||| |||||||||| |||||||| | |||||||||| | ||| CATCTTAGAG AAATCAAAGT TCTCAATCCT AGCGATAGAG CCCCTT 573 hqPGS_C01HBa0163B20.1-_SGN-E334236- (71110 70591) ******************************************************************************** EST sequence 152 -strand 657 n (File: SGN-E334702-) 1 CAAGGGTGGC TGTATGCCAT GTTGATATAC GGTTAGGAAC TACTGCCTGG TCACCGGTGA 61 TTATGGTCTT GGTTGGCCTT CACCAATAAG CACAACATTT AGCATGTTCT TTTCGATTTG 121 AATGTGTTCC TTGTATGTAC CCGCCTTGAT CAGGATAACG AAAGGAGTTG GACTGCTCTT 181 GGGGACAGCT TGAAGTGCTT CCTGAATGGT CTTGTATTGT CCGCCTCCAC TGGCAGAAAC 241 CACAGCATTA GGCTTGGAGG CAGAAATTTG AAGGAGCTTA CGATTACTGG CTTCGACAAA 301 TGAGTCACTG TTTGATAACA ATTTGCGGGT AAGGCCTGTG TTTTGTGTGA TCATTTCACC 361 GAAGCTGTTG ACCATGGAAA GAGCATTGCT ACTCAGCTCC CGAGTGGTGC TCATTAGCTT 421 CATCATTTCG TCACGGGTTG CACTGTATTC TGATTTGGTG AAACCATCTA AACAAGTCTC 481 TTCATAAGCA ACGACAGCGC TAAGCCATGA CTTGAGGTCA TCCACTATAT CCTTCATCTT 541 AGAGAAATCA AAGTTCTCAA TCCTAGCGAT AGAGCCCCTT AGTTCCTCAA CGGCTAGATC 601 AAACACCTCT TCACAAGCAA GGAGAGCGTC TTTGGTGTAA GGATCACTAG CAGCTTT Predicted gene structure (within gDNA segment 72858 to 66519): Exon 1 71110 70591 ( 520 n); cDNA 58 580 ( 523 n); score: 0.846 MATCH C01HBa0163B20.1- SGN-E334702- 0.846 520 0.791 C PGS_C01HBa0163B20.1-_SGN-E334702- (71110 70591) Alignment (genomic DNA sequence = upper lines): TGATTATGGT CTTGGTTGGC CCTTCACCAA TAAACACAAC ATTT-GCCTG -TCTTTTCAA 71053 |||||||||| |||||||||| | |||||||| ||| |||||| |||| || || ||||||| | TGATTATGGT CTTGGTTGGC C-TTCACCAA TAAGCACAAC ATTTAGCATG TTCTTTTCGA 116 TTTCAATGTG TTCCTTGTAT GTACCGGCCT TGATCAGGAT AATGAAAGGA GTTGTATAGT 70993 ||| |||||| |||||||||| ||||| |||| |||||||||| || ||||||| |||| | | TTTGAATGTG TTCCTTGTAT GTACCCGCCT TGATCAGGAT AACGAAAGGA GTTGGACTGC 176 TCATGAGGAC AGCGTTAAGT TC-TCCTGAA ATGGTCTTGT ATTGTCCGTC ACCACTTGCA 70934 || || |||| ||| | |||| | ||||| | |||||||||| |||||||| | ||||| ||| TCTTGGGGAC AGCTTGAAGT GCTTCCTG-A ATGGTCTTGT ATTGTCCGCC TCCACTGGCA 235 GAAACCACAG CATTAGGCTT GGAGGGAGAA ATTTGAAGGA GCTTATGGCT ACTGGCTTCA 70874 |||||||||| |||||||||| ||||| |||| |||||||||| ||||| | | ||||||||| GAAACCACAG CATTAGGCTT GGAGGCAGAA ATTTGAAGGA GCTTACGATT ACTGGCTTCG 295 ACAAACCAGT CACTATTTGA TAACAATTTG CGGGTAAGGC CAGTGGTTTT TGTGATCGTT 70814 ||||| ||| |||| ||||| |||||||||| |||||||||| | ||| ||| ||||||| || ACAAATGAGT CACTGTTTGA TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT 355 TCACCGAAAA CTGTTGGCCA TGGAAAGAGC ATTGATACTC AGCT--C-TT TCGTATTCAA 70757 |||||| || |||||| ||| |||||||||| |||| ||||| |||| | | || ||| TCACCG-AAG CTGTTGACCA TGGAAAGAGC ATTGCTACTC AGCTCCCGAG TGGTGCTCAT 414 TATCTTCATC ATTTTGTTGT GGGTTGCACT CTGTTCTGAT TTGATAAAAC CATCTGAGCA 70697 || ||||||| |||| || |||||||||| | ||||||| ||| | |||| ||||| | || TAGCTTCATC ATTTCGTCAC GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA 474 AGTCTCTTCA TAGGCAATCA CAGTGCTAAG CCATGTCTTG AGGTCTTCCA CCACATCCTT 70637 |||||||||| || |||| | ||| |||||| ||||| |||| ||||| |||| | | |||||| AGTCTCTTCA TAAGCAACGA CAGCGCTAAG CCATGACTTG AGGTCATCCA CTATATCCTT 534 GATCTTAGAG AAATCAAAGT TCTCAATCTT AGCGATAGAG CGTCTT 70591 ||||||||| |||||||||| |||||||| | |||||||||| | ||| CATCTTAGAG AAATCAAAGT TCTCAATCCT AGCGATAGAG CCCCTT 580 hqPGS_C01HBa0163B20.1-_SGN-E334702- (71110 70591) ******************************************************************************** EST sequence 145 -strand 784 n (File: SGN-E333795-) 1 AAAGGAGTTG GACTGCTTCT GGGGACAGCT GNAAGTGCTT CCTGAATGGT CTNGTATTGT 61 CCGCCTCCAC TGGTAGAAAC CACAGCATTA GGCTTGGAGG CAGAAATTTG AAGGAGCTTA 121 CGGTTACTAG CTTCGACAAA TGAGTCACTG TTTGATAACA ATTTGCGGGT AAGGCCTGTG 181 TTTTGTGTGA TCATTTCACC AAAGTTGTTG ACCATGGAAA GAGCATTGCT ACTCAGCTCC 241 CGGGTGGTAC TCATTAGCTT CATCATTTCG TCACGGGTTG CACTGTATTC TGATTTGGTG 301 AAACCATCTA AACAAGTCTC TTCATAAGCA ACGACAGCGC TAAGCCATGA CTGAGGGTCA 361 TCCACTATAT CCTTCATCTT NGAGAAATCA AAGTTCTCAA TCNTAGCGAT AGAGCCCCTT 421 AGTTCCTCAA CGGCTAGATC AAACACTTCT TCACAAGCAA GGAGAGCGTC TTTGGTGTAA 481 GGATCACTGG CAGCTTTCTT AACTGGCTCA GTGTTCCTTG ATGGCATTCT TGATGTCTGC 541 CACAGTGGCT TCGAATGCAA CCTTGATGTA GTCCTTTGGA TCGGACACAT TCTTTGCTGC 601 GGAGAGGGTC TTTTCACAAG TTTGTTTGTA TGGTGTGGGT TGACACATAG ATTCAACTGA 661 CTTTGTTGAA GTTGCAACTC CATTTGATGA TGTATCAGAA TCATGTTTAG TCAGGGTGAC 721 ACAGGCTGCC ACCACACAAG CCACCACAAG AACAGAAGCT ATTCCACCAA TTACCACCTT 781 CTTT Predicted gene structure (within gDNA segment 72284 to 66541): Exon 1 71008 70591 ( 418 n); cDNA 1 420 ( 420 n); score: 0.817 MATCH C01HBa0163B20.1- SGN-E333795- 0.817 418 0.533 C PGS_C01HBa0163B20.1-_SGN-E333795- (71008 70591) Alignment (genomic DNA sequence = upper lines): AAAGGAGTTG TATAGTTCAT GAGGACAGCG TTAAGTTCTC CTGAAATGGT CTTGTATTGT 70949 |||||||||| | | | | | ||||||| |||| || | |||||| || ||||||| AAAGGAGTTG GACTGCTTCT GGGGACAGCT GNAAGTGCTT CCTGAATGGT CTNGTATTGT 60 CCGTCACCAC TTGCAGAAAC CACAGCATTA GGCTTGGAGG GAGAAATTTG AAGGAGCTTA 70889 ||| | |||| | | |||||| |||||||||| |||||||||| ||||||||| |||||||||| CCGCCTCCAC TGGTAGAAAC CACAGCATTA GGCTTGGAGG CAGAAATTTG AAGGAGCTTA 120 TGGCTACTGG CTTCAACAAA CCAGTCACTA TTTGATAACA ATTTGCGGGT AAGGCCAGTG 70829 || |||| | |||| ||||| ||||||| |||||||||| |||||||||| |||||| ||| CGGTTACTAG CTTCGACAAA TGAGTCACTG TTTGATAACA ATTTGCGGGT AAGGCCTGTG 180 GTTTTTGTGA TCGTTTCACC GAAAACTGTT GGCCATGGAA AGAGCATTGA TACTCAGCT- 70770 ||| ||||| || ||||||| ||| |||| | |||||||| ||||||||| ||||||||| TTTTGTGTGA TCATTTCACC -AAAGTTGTT GACCATGGAA AGAGCATTGC TACTCAGCTC 239 -C-TTTCGTA TTCAATATCT TCATCATTTT GTTGTGGGTT GCACTCTGTT CTGATTTGAT 70712 | | ||| ||| || || ||||||||| || ||||| ||||| | || |||||||| | CCGGGTGGTA CTCATTAGCT TCATCATTTC GTCACGGGTT GCACTGTATT CTGATTTGGT 299 AAAACCATCT GAGCAAGTCT CTTCATAGGC AATCACAGTG CTAAGCCATG TCTTGAGGTC 70652 ||||||||| | ||||||| ||||||| || || |||| | |||||||||| || |||| GAAACCATCT AAACAAGTCT CTTCATAAGC AACGACAGCG CTAAGCCATG ACTGAGGGTC 359 TTCCACCACA TCCTTGATCT TAGAGAAATC AAAGTTCTCA ATCTTAGCGA TAGAGCGTCT 70592 ||||| | | ||||| |||| | |||||||| |||||||||| ||| |||||| |||||| || ATCCACTATA TCCTTCATCT TNGAGAAATC AAAGTTCTCA ATCNTAGCGA TAGAGCCCCT 419 T 70591 | T 420 hqPGS_C01HBa0163B20.1-_SGN-E333795- (71008 70591) ******************************************************************************** EST sequence 73 -strand 722 n (File: SGN-E331929-) 1 TGGCAGAAAC CACAGCATTA GGCTTGGAGG CAGAAATTTG AAGGAGCTTA CGATTACTGG 61 CTTCGACAAA TGAGTCACTG TTTGATAACA ATTTGCGGGT AAGGCCTGTG TTTTGTGTGA 121 TCATTTCACC GAAGCTGTTG ACCATGGAAA GAGCATTGCT ACTCAGCTCC CGAGTGGTGC 181 TCATTAGCTT CATCATTTCG TCACGGGTTG CACTGTATTC TGATTTGGTG AAACCATCTA 241 AACAAGTCTC TTCATAAGCA ACGACAGCGC TAAGCCATGA CTTGAGGTCA TCCACTATAT 301 CCTTCATCTT AGAGAAATCA AAGTTCTCAA TCCTAGCGAT AGAGCCCCTT AGTTCCTCAA 361 CGGCTAGATC AAACACCTCT TCACAAGCAA GGAGAGCGTC TTTGGTGTAA GGATCACTAG 421 CAGCTTTCTT AACTGGCTCA GTGTTCTTGA TGGCATTCTT GATGTCTGCC ACAGTGGCTT 481 CGAATGCAAC CTTGATGTAG CCCTTTGGAT CGGACACATT CTTTGCTGCG GAGAGGGTCT 541 TTTCACAAGT TTGTTTGTAT GGTGTGGGTT GACACATAGA TTCAACTGAC TTTGTTGAAG 601 TTGCAACTCC ATTTGATGAA GTATCAGAAT CATGTTTAGT CAGGGTGACA CAGGCTGCCA 661 CCACACAAGC CACCACAAGA ACAGAAGCTA TTCCACCAAT TACCACCTTC TTTGTCATTT 721 TT Predicted gene structure (within gDNA segment 71566 to 69789): Exon 1 70936 70591 ( 346 n); cDNA 3 350 ( 348 n); score: 0.848 MATCH C01HBa0163B20.1- SGN-E331929- 0.848 346 0.479 C PGS_C01HBa0163B20.1-_SGN-E331929- (70936 70591) Alignment (genomic DNA sequence = upper lines): GCAGAAACCA CAGCATTAGG CTTGGAGGGA GAAATTTGAA GGAGCTTATG GCTACTGGCT 70877 |||||||||| |||||||||| |||||||| | |||||||||| |||||||| | |||||||| GCAGAAACCA CAGCATTAGG CTTGGAGGCA GAAATTTGAA GGAGCTTACG ATTACTGGCT 62 TCAACAAACC AGTCACTATT TGATAACAAT TTGCGGGTAA GGCCAGTGGT TTTTGTGATC 70817 || ||||| ||||||| || |||||||||| |||||||||| |||| ||| | || ||||||| TCGACAAATG AGTCACTGTT TGATAACAAT TTGCGGGTAA GGCCTGTGTT TTGTGTGATC 122 GTTTCACCGA AAACTGTTGG CCATGGAAAG AGCATTGATA CTCAGCT--C -TTTCGTATT 70760 |||||||| || |||||| |||||||||| ||||||| || ||||||| | | || | ATTTCACCG- AAGCTGTTGA CCATGGAAAG AGCATTGCTA CTCAGCTCCC GAGTGGTGCT 181 CAATATCTTC ATCATTTTGT TGTGGGTTGC ACTCTGTTCT GATTTGATAA AACCATCTGA 70700 || || |||| ||||||| || ||||||| ||| | |||| |||||| | | |||||||| | CATTAGCTTC ATCATTTCGT CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA 241 GCAAGTCTCT TCATAGGCAA TCACAGTGCT AAGCCATGTC TTGAGGTCTT CCACCACATC 70640 ||||||||| ||||| |||| |||| ||| |||||||| | |||||||| | |||| | ||| ACAAGTCTCT TCATAAGCAA CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC 301 CTTGATCTTA GAGAAATCAA AGTTCTCAAT CTTAGCGATA GAGCGTCTT 70591 ||| |||||| |||||||||| |||||||||| | |||||||| |||| ||| CTTCATCTTA GAGAAATCAA AGTTCTCAAT CCTAGCGATA GAGCCCCTT 350 hqPGS_C01HBa0163B20.1-_SGN-E331929- (70936 70591) ******************************************************************************** EST sequence 202 -strand 560 n (File: SGN-E331151-) 1 TGTTGATATA CGGTTAGGAA CTACTGCCTG GTCACCGGTG ATTATGGTCT TGGTTGGGCT 61 TTCACCAATA AGCACAACAT TTAGCATGTT CTTTTCGATT TGAATGTGTT CCTTGTATGT 121 ACCCGCCTTG ATCAGGATAA CGAAAGGAGT TGGACTGCTC TTGGGGACAG CTTGAAGTGC 181 TTCTTGAATG GTCTTGTATT GTCCGCTTCC ACTGGCAGAA ACCACAGCAT TAGGCTTGGA 241 GGCAGAAATT TGAAGGAGCT TACGATTACT GGCTTCGACA AATGAGTCAC TGTTTGATAA 301 CAATTTGCGG GTAAGGCCTG TGTTTTGTGT GATCATTTCA CCGAAGCTGT TGACCATGGA 361 AAGAGCATTG CTACTCAGCT CCAGAGTGGT GCTCATTAGC TTCATCATTT CGTCACGGGT 421 TGCACTGTAT TCTGATTTGG TGAAACCATC TAAACAAGTC TCTTCATAAG CAACGACAGC 481 GATAAGCCAT GACTTGAGGT CATCCACTAT ATCCTTCATC TTAGAGAAAT CAAAGTTCTC 541 AATCCTAAAG ATAGAGCGGC Predicted gene structure (within gDNA segment 72678 to 67309): Exon 1 71110 70595 ( 516 n); cDNA 39 558 ( 520 n); score: 0.840 MATCH C01HBa0163B20.1- SGN-E331151- 0.840 516 0.921 C PGS_C01HBa0163B20.1-_SGN-E331151- (71110 70595) Alignment (genomic DNA sequence = upper lines): TGATTATGGT CTTGGTTGGC CCTTCACCAA TAAACACAAC ATTT-GCCTG -TCTTTTCAA 71053 |||||||||| ||||||||| | |||||||| ||| |||||| |||| || || ||||||| | TGATTATGGT CTTGGTTGGG CTTTCACCAA TAAGCACAAC ATTTAGCATG TTCTTTTCGA 98 TTTCAATGTG TTCCTTGTAT GTACCGGCCT TGATCAGGAT AATGAAAGGA GTTGTATAGT 70993 ||| |||||| |||||||||| ||||| |||| |||||||||| || ||||||| |||| | | TTTGAATGTG TTCCTTGTAT GTACCCGCCT TGATCAGGAT AACGAAAGGA GTTGGACTGC 158 TCATGAGGAC AGCGTTAAGT TCTCCTGAAA TGGTCTTGTA TTGTCCGTCA CCACTTGCAG 70933 || || |||| ||| | |||| || || || |||||||||| ||||||| ||||| |||| TCTTGGGGAC AGCTTGAAGT GCTTCTTGAA TGGTCTTGTA TTGTCCGCTT CCACTGGCAG 218 AAACCACAGC ATTAGGCTTG GAGGGAGAAA TTTGAAGGAG CTTATGGCTA CTGGCTTCAA 70873 |||||||||| |||||||||| |||| ||||| |||||||||| |||| | || |||||||| | AAACCACAGC ATTAGGCTTG GAGGCAGAAA TTTGAAGGAG CTTACGATTA CTGGCTTCGA 278 CAAACCAGTC ACTATTTGAT AACAATTTGC GGGTAAGGCC AGTGGTTTTT GTGATCGTTT 70813 |||| |||| ||| |||||| |||||||||| |||||||||| ||| ||| | |||||| ||| CAAATGAGTC ACTGTTTGAT AACAATTTGC GGGTAAGGCC TGTGTTTTGT GTGATCATTT 338 CACCGAAAAC TGTTGGCCAT GGAAAGAGCA TTGATACTCA GCT-C--TTT CGTATTCAAT 70756 ||||| || | ||||| |||| |||||||||| ||| |||||| ||| | | || ||| | CACCG-AAGC TGTTGACCAT GGAAAGAGCA TTGCTACTCA GCTCCAGAGT GGTGCTCATT 397 ATCTTCATCA TTTTGTTGTG GGTTGCACTC TGTTCTGATT TGATAAAACC ATCTGAGCAA 70696 | |||||||| ||| || | ||||||||| | |||||||| || | ||||| |||| | ||| AGCTTCATCA TTTCGTCACG GGTTGCACTG TATTCTGATT TGGTGAAACC ATCTAAACAA 457 GTCTCTTCAT AGGCAATCAC AGTGCTAAGC CATGTCTTGA GGTCTTCCAC CACATCCTTG 70636 |||||||||| | |||| || || | ||||| |||| ||||| |||| ||||| | |||||| GTCTCTTCAT AAGCAACGAC AGCGATAAGC CATGACTTGA GGTCATCCAC TATATCCTTC 517 ATCTTAGAGA AATCAAAGTT CTCAATCTTA GCGATAGAGC G 70595 |||||||||| |||||||||| ||||||| || |||||||| | ATCTTAGAGA AATCAAAGTT CTCAATCCTA AAGATAGAGC G 558 hqPGS_C01HBa0163B20.1-_SGN-E331151- (71110 70595) ******************************************************************************** EST sequence 110 -strand 530 n (File: SGN-E333032-) 1 TATGCCATGT TGATATACGG TTAGGAACTA CTGCCTGGTC ACCGGTGATT ATGGTCTTGG 61 TTGGGCCTTC ACCAATAAGC ACAACATTTA GCATGTTCTT TTCGATTTCA ATGTGTTCCT 121 TGTATGTACC CGCCTTGATC AGGATAACGA AAGGAGTTGG ACTGCTCCTG GGGACAGCTT 181 GAAGTGCTTC CTGAATGGTC TTGTATTGTC CGCCTCCACT GGTAGAAACC ACAGCATTAG 241 GCTTGGAGGC AGAAATTTGA AGGAGCTTAC GGTTACTAGC TTCGACAAAT GAGTCACTGT 301 TTGATAACAA TTTGCGGGTA AGGCCTGTGT TTTGTGTGAT CATTTCACCA AAGTTGTTGA 361 CCATGGAAAG AGCATTGCTA CTCAGCTCCC GGGTGGTACT CATTAGCTTC ATCATTTCGT 421 CACGGGTTGC ACTGTATTCT GATTTGGTGA AACCATCTAA ACAAGTCTCT TCATAAGCAA 481 CGACAGCGCT AAGCCATGAC TTGAGGTCAT CCACTATATC CTTCATCTTT Predicted gene structure (within gDNA segment 72703 to 67679): Exon 1 71110 70631 ( 480 n); cDNA 46 529 ( 484 n); score: 0.840 MATCH C01HBa0163B20.1- SGN-E333032- 0.840 480 0.906 C PGS_C01HBa0163B20.1-_SGN-E333032- (71110 70631) Alignment (genomic DNA sequence = upper lines): TGATTATGGT CTTGGTTGGC CCTTCACCAA TAAACACAAC ATTT-GCCTG -TCTTTTCAA 71053 |||||||||| ||||||||| |||||||||| ||| |||||| |||| || || ||||||| | TGATTATGGT CTTGGTTGGG CCTTCACCAA TAAGCACAAC ATTTAGCATG TTCTTTTCGA 105 TTTCAATGTG TTCCTTGTAT GTACCGGCCT TGATCAGGAT AATGAAAGGA GTTGTATAGT 70993 |||||||||| |||||||||| ||||| |||| |||||||||| || ||||||| |||| | | TTTCAATGTG TTCCTTGTAT GTACCCGCCT TGATCAGGAT AACGAAAGGA GTTGGACTGC 165 TCATGAGGAC AGCGTTAAGT TC-TCCTGAA ATGGTCTTGT ATTGTCCGTC ACCACTTGCA 70934 || || |||| ||| | |||| | ||||| | |||||||||| |||||||| | ||||| | | TCCTGGGGAC AGCTTGAAGT GCTTCCTG-A ATGGTCTTGT ATTGTCCGCC TCCACTGGTA 224 GAAACCACAG CATTAGGCTT GGAGGGAGAA ATTTGAAGGA GCTTATGGCT ACTGGCTTCA 70874 |||||||||| |||||||||| ||||| |||| |||||||||| ||||| || | ||| ||||| GAAACCACAG CATTAGGCTT GGAGGCAGAA ATTTGAAGGA GCTTACGGTT ACTAGCTTCG 284 ACAAACCAGT CACTATTTGA TAACAATTTG CGGGTAAGGC CAGTGGTTTT TGTGATCGTT 70814 ||||| ||| |||| ||||| |||||||||| |||||||||| | ||| ||| ||||||| || ACAAATGAGT CACTGTTTGA TAACAATTTG CGGGTAAGGC CTGTGTTTTG TGTGATCATT 344 TCACCGAAAA CTGTTGGCCA TGGAAAGAGC ATTGATACTC AGCT--C-TT TCGTATTCAA 70757 ||||| ||| ||||| ||| |||||||||| |||| ||||| |||| | | ||| ||| TCACC-AAAG TTGTTGACCA TGGAAAGAGC ATTGCTACTC AGCTCCCGGG TGGTACTCAT 403 TATCTTCATC ATTTTGTTGT GGGTTGCACT CTGTTCTGAT TTGATAAAAC CATCTGAGCA 70697 || ||||||| |||| || |||||||||| | ||||||| ||| | |||| ||||| | || TAGCTTCATC ATTTCGTCAC GGGTTGCACT GTATTCTGAT TTGGTGAAAC CATCTAAACA 463 AGTCTCTTCA TAGGCAATCA CAGTGCTAAG CCATGTCTTG AGGTCTTCCA CCACATCCTT 70637 |||||||||| || |||| | ||| |||||| ||||| |||| ||||| |||| | | |||||| AGTCTCTTCA TAAGCAACGA CAGCGCTAAG CCATGACTTG AGGTCATCCA CTATATCCTT 523 GATCTT 70631 ||||| CATCTT 529 hqPGS_C01HBa0163B20.1-_SGN-E333032- (71110 70631) ******************************************************************************** EST sequence 190 -strand 667 n (File: SGN-E357775-) 1 GGTTTCTCTT TTTNCTCTCT AGATCTCTCA TCTCTTTCTC TTGAAAGTTT TTGTGTTCTT 61 CATTCATCAA GTTTGTGTGT GATTCGATCC TAACATCAAG TGTCAAAACT CTCTTCATGT 121 AAGAAAGAAA AAAATGAAAA CATGAACTTC CCCAATATTT TAGCACAATT GGTAGAGGAA 181 AGGCACAAAA CTACACTGAG AAAATAACAG GTGCATGATT AGTGTACACT GTCGATCGAT 241 CGATAAAAAC ACAAGTTAAT CGTTTAAAGA TCCTCTGGAT GAATGCCAAG AACCATTGAG 301 GCTATTGAAC AGGCAAGTAC CTGTCTCGTT GTTTGGCATT TGGAGATGTA CTCTAGATCT 361 TAACTGTGAT GTTCTGAGCT GTAAAAGTAC TAACTCCGAT CATCAGTCAG ATCAACGTCC 421 CTATTACTTT GTAACGATGT CTGGCTCAAA TACCTACTGT GAATCGACAA ATACCTCCAA 481 TTCCAGTAAA GAATCATATG TTTTCTTCTC GCGTGTGTCG AACACTGTAA TGCCTGTGAT 541 TTTCTGTACC CCATGCTTCA CAGCAATCAG ATTCAACTCT AATTCTGAAG AGCTAAATGC 601 TTCCACCTGT GCCAAATGCA TTGTTAGAAG ACCATTAACC ATGATAGCCT TCTCATCAAG 661 TGAGTCA Predicted gene structure (within gDNA segment 72791 to 63598): Exon 1 72056 71957 ( 100 n); cDNA 1 96 ( 96 n); score: 0.880 Intron 1 71956 70350 (1607 n); Pd: 0.000 (s: 0.86), Pa: 0.978 (s: 0) Exon 2 70349 70332 ( 18 n); cDNA 97 114 ( 18 n); score: 0.556 Intron 2 70331 65183 (5149 n); Pd: 0.735 (s: 0), Pa: 0.371 (s: 0) Exon 3 65182 65157 ( 26 n); cDNA 115 140 ( 26 n); score: 0.673 MATCH C01HBa0163B20.1- SGN-E357775- 0.880 144 0.216 C PGS_C01HBa0163B20.1-_SGN-E357775- (72056 71957,70349 70332,65182 65157) Alignment (genomic DNA sequence = upper lines): GGGTTTTCTC TTTCTCTCTC TAGATCTCTC ATCTCTTTCT CTTGAAAGTT CTTGTGTTCT 71997 || || ||| ||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| GGTTTCTCT- TTTTNCTCTC TAGATCTCTC ATCTCTTTCT CTTGAAAGTT TTTGTGTTCT 59 TCATTCATCT AGTGTGTGTG CGTGAATTCG ATCCTAACAG TTTAGACTTT CCTTGAGAAG 71937 ||||||||| ||| | |||| ||| ||||| ||||||||| TCATTCATCA AGT-T-TGTG TGTG-ATTCG ATCCTAACAT .......... .......... 96 TGACCATGCA AGCTTGTGTA TCACCTGGTT TCCTCACAAT CAATTGGCAG TTTTGGAAGC 71877 .......... .......... .......... .......... .......... .......... 96 ATCACTAAAA ATGAAATCAA TGTTGCCTGT AATGATAGAG TCACGGAACA ATTATCTGTA 71817 .......... .......... .......... .......... .......... .......... 96 CGAGTGAGCG TATAGGATGT ATTGGAAACC ATCGATTTTG TAGTTGTAGA CAATTGCTTT 71757 .......... .......... .......... .......... .......... .......... 96 ATCATCATTA ATCCTCAATG CAACAACTTG TTCTTTTACT GGTCCTGCTC TGTTTTCAAT 71697 .......... .......... .......... .......... .......... .......... 96 ACCGATGTCC CTGATAACGA ACCTTTCACC AGAAACACCA AGGGAGGTTG TATGCCATTT 71637 .......... .......... .......... .......... .......... .......... 96 TACTACACCG CCACCATTCT TACTCCCTTG TCACCCAGTG ACAGTGGCGG TAGCCATAAA 71577 .......... .......... .......... .......... .......... .......... 96 TTTCACAAAG AGTGTCCAAA AATTGTATAG GGGTATATTT TTTCTTTTGG ATGAATGAGT 71517 .......... .......... .......... .......... .......... .......... 96 GCACTAGAAA TTTTAAAAAT TAAAGTACGT AATATACATG AAAATTTTTG GAAAGAAAAG 71457 .......... .......... .......... .......... .......... .......... 96 ATGAAAAGAT GAATGAGTGG ACTAGAAAAT TTAAAAATTA AACTATGTAG TATACATGAA 71397 .......... .......... .......... .......... .......... .......... 96 ATTTGTGGGG GGGGGGGGGG ATACCAAATA TATATGAATT TTTTTTTTAA AAAAACGAGG 71337 .......... .......... .......... .......... .......... .......... 96 AAAAGCTACT GCTAGGGAAA TTTGAACTCA CAAGCGCTTA AATGTTTGGC TCTTTCAAGA 71277 .......... .......... .......... .......... .......... .......... 96 CAACTTAAAC CACTAGGCTG CACCTTAAAC CACTAGGCTA CACCTTGTTG TGTTAAGGGT 71217 .......... .......... .......... .......... .......... .......... 96 GTCCAAAATA AATTAGTTAA CCATTTTGTA TATTATTTTA CTTGTATATA CTATGTAATT 71157 .......... .......... .......... .......... .......... .......... 96 TACCGACGAA GGGTGTCCAA TAGTATATAG CTACGCCCCT GCCTAGTGAT TATGGTCTTG 71097 .......... .......... .......... .......... .......... .......... 96 GTTGGCCCTT CACCAATAAA CACAACATTT GCCTGTCTTT TCAATTTCAA TGTGTTCCTT 71037 .......... .......... .......... .......... .......... .......... 96 GTATGTACCG GCCTTGATCA GGATAATGAA AGGAGTTGTA TAGTTCATGA GGACAGCGTT 70977 .......... .......... .......... .......... .......... .......... 96 AAGTTCTCCT GAAATGGTCT TGTATTGTCC GTCACCACTT GCAGAAACCA CAGCATTAGG 70917 .......... .......... .......... .......... .......... .......... 96 CTTGGAGGGA GAAATTTGAA GGAGCTTATG GCTACTGGCT TCAACAAACC AGTCACTATT 70857 .......... .......... .......... .......... .......... .......... 96 TGATAACAAT TTGCGGGTAA GGCCAGTGGT TTTTGTGATC GTTTCACCGA AAACTGTTGG 70797 .......... .......... .......... .......... .......... .......... 96 CCATGGAAAG AGCATTGATA CTCAGCTCTT TCGTATTCAA TATCTTCATC ATTTTGTTGT 70737 .......... .......... .......... .......... .......... .......... 96 GGGTTGCACT CTGTTCTGAT TTGATAAAAC CATCTGAGCA AGTCTCTTCA TAGGCAATCA 70677 .......... .......... .......... .......... .......... .......... 96 CAGTGCTAAG CCATGTCTTG AGGTCTTCCA CCACATCCTT GATCTTAGAG AAATCAAAGT 70617 .......... .......... .......... .......... .......... .......... 96 TCTCAATCTT AGCGATAGAG CGTCTTTGGT GTAAGGATCA CTGGCAGCTT TCTTAATCGG 70557 .......... .......... .......... .......... .......... .......... 96 CTCGGTGTTT TTTGAGGTCA TTCTTGATGT CTGACACAGG CTGGCACCAC AAGAACAGAA 70497 .......... .......... .......... .......... .......... .......... 96 GCTATTCCAC CGATTACCAC CTTCTTTGCA ATTTTATCAA ATCACATGTT AAGCCAATCA 70437 .......... .......... .......... .......... .......... .......... 96 TAGTTTTGAA AAAGGCATGA AGTTTTGACC ATTAGTTTTA AATGTGTGTG TTTTGGGAAA 70377 .......... .......... .......... .......... .......... .......... 96 AAATAATCAT ATGATAATTT GTTACAGCCG TTTTCAAAAC TAAAGGTCAA AAACTTCATG 70317 | | ||||||| | .......... .......... .......CAA GTGTCAAAAC TCTCT..... .......... 114 CCTTCGAGAA AATTTTATTT ATTTTTGTAA AATAATAGTT GAGTTGTCAC TTGATTTTTG 70257 .......... .......... .......... .......... .......... .......... 114 GAAAATTAAG AAAACCATTT AAAAAGATAA TTTTGAAATT TTTTCAATGA ACTTAATTTT 70197 .......... .......... .......... .......... .......... .......... 114 AAGGGTTCAA GCGATCCTCT CAGAAAAGTT ATATGTGGTT GACCAACGAA TTAAATATGT 70137 .......... .......... .......... .......... .......... .......... 114 CAATAATGAA AATATTTAAG AATTATTCGT GAAAAGAACT TATTTAAAAA TGAACAGAAA 70077 .......... .......... .......... .......... .......... .......... 114 TTATTTGATA CATAAACATT CATACTATTT CAAGAAATGA AATAATTCTA ATGTGGAAGT 70017 .......... .......... .......... .......... .......... .......... 114 TTCAGAAATA ATTCTAGCTT AACAATTTAT TCGAATCAAA ATTTTCAAAT AAGCGAGTAG 69957 .......... .......... .......... .......... .......... .......... 114 CTCAAACGCT TAAATATGAA TATGTATTAT TTGATAACTA TGAAAGAATA TGAAAAATAT 69897 .......... .......... .......... .......... .......... .......... 114 TTTAACTTAT CCTGACAAGC CTGGATTTGC CCAAAAGACA AGTTAGTTCA CTTAGCATTT 69837 .......... .......... .......... .......... .......... .......... 114 GTGAAAAAGA TACATTTTTT TATTTAAGTC AATTGCACAA ACCTTGTATT GTTTGTAATC 69777 .......... .......... .......... .......... .......... .......... 114 ATGGAAGGAT TTGACATTTA TCCCTACCTT GTTAATAGAA CTTCAAAATA TACATGAGAG 69717 .......... .......... .......... .......... .......... .......... 114 GTGGGCTACA CCACGTCTCC CCGGTTACAT GTCAAAAGAT ATTTCTAAGA CTTCGGTTGA 69657 .......... .......... .......... .......... .......... .......... 114 ACACTTCCTT AGAGAGAACA CTATTAATTA AAGACACTCT AATTAGTGAA ATAAAGGTAT 69597 .......... .......... .......... .......... .......... .......... 114 CAATTCAAAC TCTTAATTTC TCGTTGAGGA TTCAATAACA AATCCACTAA AATATCATTA 69537 .......... .......... .......... .......... .......... .......... 114 GGTAGTGTAT GAGAAGGGTA CAGTGTATGC AGAACATATT ACTATCTCAA CGAGATAGAG 69477 .......... .......... .......... .......... .......... .......... 114 AGACTTCTTC TGAAAGACTC TCGATTCAAG TTTATCAAAA CCAAGTAATT ATATAAGAAA 69417 .......... .......... .......... .......... .......... .......... 114 ATAACAATGA AAAAAGCATA GTCATTAATT AATAAGAAAA ACAGTGCAAA GTCTACACGA 69357 .......... .......... .......... .......... .......... .......... 114 AAAAAACACT AACAAGAGTA AAATATTGTA ATCAAACACA TTAACAACAT ATGGCAGGAA 69297 .......... .......... .......... .......... .......... .......... 114 CTACAAGGGT ACAACAATTA CTATGACAGA CAAACAAACA AGCCTAAACC TTCGCAAGGC 69237 .......... .......... .......... .......... .......... .......... 114 AACACACCCT CCATCCCTTC TATCCCTCTA CCTTAATCAA GGATCTATAC TCCTTCCTAT 69177 .......... .......... .......... .......... .......... .......... 114 CTAGAGTCGT GACCTCGATA ACATGAAGTT GTGTCATATA TTGTATAATC ACCTTTTTCT 69117 .......... .......... .......... .......... .......... .......... 114 CAATACTTCT TTGGCCTACA TATATCCTTT GTGAATCCCC AACAACTAGA TTCTCACTCC 69057 .......... .......... .......... .......... .......... .......... 114 TCCTCACTGT GGCACCAGCG CACCTCTTAT GCACATGTCT AAACCATCTT AGTCTCGCTT 68997 .......... .......... .......... .......... .......... .......... 114 CCCACATCTT GTTCTTCACA TAGGTAACTC TCCTCTTCTC CCAGATAACC TCATTCTTAA 68937 .......... .......... .......... .......... .......... .......... 114 TCTTATCGCT TCTAGTATGC TCACACATTT ATCTCAACAT ATGCATCTAC GAAACATGCA 68877 .......... .......... .......... .......... .......... .......... 114 TCTTTTGTAC ATATGAGTGC TTGACTGGCC AACACTCCAA CCTACATAAC AAGAACACTC 68817 .......... .......... .......... .......... .......... .......... 114 TAAACACCAA TTTGTAGAAC TTACCTTTAA GTCTAGGTGG TACCTTCTTA TCATACTAAA 68757 .......... .......... .......... .......... .......... .......... 114 CTCTAGAGGC AAGCCTCTAT TTCATCCATG TTGCTCTAGT GGGATGTGTG ACATCATCAT 68697 .......... .......... .......... .......... .......... .......... 114 TGATGTGCTC GTTACCCTGT ATTATGAGCC CAAGATACTT AAAACTTTCT GTCTTAGAAA 68637 .......... .......... .......... .......... .......... .......... 114 TAGTTTAAGT GGCAAGCCTT ACTTCCACGT TCACTTCATA TGACACGCTA TTGAATTTGC 68577 .......... .......... .......... .......... .......... .......... 114 ACTCCAAATA TTCTATTTTG TTCATGCTCA ACATGGACCC TTCGAACTCT ATAGTCTCTT 68517 .......... .......... .......... .......... .......... .......... 114 TCCAAATCTC CAACATAGCA TTAACTCAAT TTGGTGTCTA ATCAATCAGT ATTATGTCTT 68457 .......... .......... .......... .......... .......... .......... 114 CTGCAAATAA TATACACAGA GGAACCTCTT CCTGAATAGA GCACATCAGT TCATCTATCA 68397 .......... .......... .......... .......... .......... .......... 114 CCAAGACAAA TAGGAAAGCA CTAAGAATTG ATCCCTTAAT TGAAGTGTAG CCTCATCGTA 68337 .......... .......... .......... .......... .......... .......... 114 ACTGGTAAGT GCTCTGAGTC TTTTCCGATT GTTTTATGAT GACCCAGACC GTCGTTATTG 68277 .......... .......... .......... .......... .......... .......... 114 GCACCTACAC TACAACTTGG TGGGAGAACC ACTACTAGTT ATCAACTAAA GCAATAAACC 68217 .......... .......... .......... .......... .......... .......... 114 TACAAACTAA GGTATTAACG TTACGGAAGC AAGTTAAATA ACTAAAGACA ATGTTCCATT 68157 .......... .......... .......... .......... .......... .......... 114 TCTAAACAAT GGTATAACAA CTAACTAATA ATGTGGAAGA TAAACCTAGA ACCTGAAAGT 68097 .......... .......... .......... .......... .......... .......... 114 CAATGTACTA AAATTAGAAA TAAGAACCAA ATCTAACAAT AATTTCTTGT GAACTATCTA 68037 .......... .......... .......... .......... .......... .......... 114 ACTAACTAAA ACAAGGTCTA CGTCCAAAAA TGATGGACAT AGACTAAAGA AAATTTTATG 67977 .......... .......... .......... .......... .......... .......... 114 GCAATTCGAA CGATGTGTCT CACCCTTGAA CTCGAAGTGA TCATCGATCT CCTAAGAGAG 67917 .......... .......... .......... .......... .......... .......... 114 GTCTATCAAC AGTCGTGCAA GATGCGCTGT ACTCAACAAA AATATGATCA AGTGCAGAAT 67857 .......... .......... .......... .......... .......... .......... 114 CGGTACACAA CCACGGTGTA GTGGTAAGTC ACGTGGCTAT CCCACTAGTG TAACATAAAC 67797 .......... .......... .......... .......... .......... .......... 114 AAGCAATTAC AGGATTATAA AACATGCATA AATATCAACA TATTCAATAC TATCACAAGA 67737 .......... .......... .......... .......... .......... .......... 114 ACAATATCAC AGTTCACATG TTATATCATG TAGTTGGTCC TCTCACGGAA CCCAAAATCA 67677 .......... .......... .......... .......... .......... .......... 114 AATTGTTAGC ATGCCGGAAT GTGGCTATCA AATCCATTTT ATGGAAAACA TGAAAATCGA 67617 .......... .......... .......... .......... .......... .......... 114 TCCCAATTAG CATGTCGAAA TGTGAAAATC CGATTCAAGT TAGAGTGTCG TAACGTGGCA 67557 .......... .......... .......... .......... .......... .......... 114 GCTGATCCCA ATCACATATT ACAATAACAC ATCAAGATCA CACGTTCAAG TCATAATTTC 67497 .......... .......... .......... .......... .......... .......... 114 ATTGTGTCAA TATTCATATT TCTCATTTCA ACATCTATGA TCAATATTGT GTTATGTATA 67437 .......... .......... .......... .......... .......... .......... 114 CACATACAAG TATCATAACG AAGCAAAGCA AATGTATATC ATACAATAAT AGAATCAAAA 67377 .......... .......... .......... .......... .......... .......... 114 CCATCACCAA CCTTAAAACA AGCTTGAAAC CCTAGACAGA TTGATCCATT CCTTTCCAGA 67317 .......... .......... .......... .......... .......... .......... 114 TTCGTTCTGC TTGTTCGTGG TTTATAAATA ACAATTCATG TACAGGATTC AATAAAGAAA 67257 .......... .......... .......... .......... .......... .......... 114 CACTCAATTC CAAATGTTAA CGAACTATGA ACCTTAGTTC AAAACCCATG ACCCCAAGTA 67197 .......... .......... .......... .......... .......... .......... 114 GTCAATTTAT GGTTAATTCC ACCATAAGAC TCTTCAAGAA ATCCTTCCTC ATTAATATTG 67137 .......... .......... .......... .......... .......... .......... 114 ACCCATTCTA AAAGTATATA CGGATCAAAA ACTAATTCAG GAAGTAAAAA CTTACATCTA 67077 .......... .......... .......... .......... .......... .......... 114 GTTTCAAGAA TGGTGGAAAA TGAGTTGGAA TAGCTCAAGG GTCGTCTCAT TACTCAAAAA 67017 .......... .......... .......... .......... .......... .......... 114 GTCAAAAAGT ACAAAATAAA GTCGTCTAAG GGTTTTATTT ATGATTTTAA AATCCTCCAT 66957 .......... .......... .......... .......... .......... .......... 114 CCTGCTCCAG CAACACCCAT CCTGTTGTAG CGGCGTCGCT GCAGTGGCAG TAATCCTGCT 66897 .......... .......... .......... .......... .......... .......... 114 GAGCGGCACA AATTAGACCA GTGAGCTTTT TAAAAAAACT AAAAAAATTA CGTATATACA 66837 .......... .......... .......... .......... .......... .......... 114 TTCTCGTCTG TTCCGCTACA AGGGTACCCA TCCTGTTGTA GCGGCATCGA TGTAGTGACA 66777 .......... .......... .......... .......... .......... .......... 114 CAAAACGAGA TAGTGAGCTC CTTAAGGGTA TTTCACTTCT CCCTTTTTAC AATACCCTCT 66717 .......... .......... .......... .......... .......... .......... 114 TCACCCACTA TGCTGAGAAA ATGCTCTTAA CGTCAAAATC AATTCCAAAT GATCTACTTA 66657 .......... .......... .......... .......... .......... .......... 114 TCCAAATTCG ATTTTGTAAA GTTGTACGAA TTCCTTTACA ATTTATCTAT CCAATTATGT 66597 .......... .......... .......... .......... .......... .......... 114 AATCAAAACT ACATTTACTC CATCCGATTG CTACCGGATT TTTCTACGCC TTGATGACTC 66537 .......... .......... .......... .......... .......... .......... 114 TAATTTTCTC CAAATCTGGA CAAGGTTGGA AATATCCTAG TCATATGAAA AGTTTTTCTG 66477 .......... .......... .......... .......... .......... .......... 114 ACCCCAATTT TCCCCATTGG CATTTCTAGA AGACGAAACC GGTTGTTACA GTAGATACCA 66417 .......... .......... .......... .......... .......... .......... 114 ATTTATCAAT CAGTCGTCCT CGGGTGATCA ACTAAGGAAA AGTAGTCTAG AGAAGGAACA 66357 .......... .......... .......... .......... .......... .......... 114 AGGTAGTACC TGATTCGACG AACAATTGTG GATACTAGTC TCGCATATCC TTTTCAGTCT 66297 .......... .......... .......... .......... .......... .......... 114 CCCAAATAGA TTCCTCAACT GGACGATGCT TCCATTGACC TTTTACAAAC TTAATCACTT 66237 .......... .......... .......... .......... .......... .......... 114 TGTTCCTCAA CTTTCGAACA TCACGATCAA GAATAGCAAT CGGTTCCTCC TCATATTGGA 66177 .......... .......... .......... .......... .......... .......... 114 GGTCCTTGCA TAACACTATT GAGTCCCACT TAATGATATA CTCTCCATCA CCGTGATAGC 66117 .......... .......... .......... .......... .......... .......... 114 TCTTCAACAT AGACACATCA AATAAAGAAT GTACATCGGA CAAGTTTGTA GGTAGCGTCA 66057 .......... .......... .......... .......... .......... .......... 114 ATCTATACGC CACCGTTCCT ACACGTTCAA GAATCTAAAA GGGATCAATA TACCGAGGAC 65997 .......... .......... .......... .......... .......... .......... 114 TCAACTTACC CCTCTAGACA AGTCTCATCA CCCCTTTCAT GGTTATACCT TGAGAAGAAC 65937 .......... .......... .......... .......... .......... .......... 114 ATTCTCGCCG GTCTGGAATT CCATGTCTCT CACTTTGTGA TCCGCATACT TCTTTTATCT 65877 .......... .......... .......... .......... .......... .......... 114 ACTCTACGAG GTTAGAAATT TAGCTCGAAT GCTCCTCACC TTATCTTGAG CGTCGTTCAC 65817 .......... .......... .......... .......... .......... .......... 114 TAAGTCAATC CCCCAAAGGT TTTACATCTC CGGATTCAAA CCAACATATG GGTTATCTAC 65757 .......... .......... .......... .......... .......... .......... 114 ATCCTGTCCC ATATAACGCT TCAAATGATG TGATATCAAT GCTCGAGTGA TAACTATTAT 65697 .......... .......... .......... .......... .......... .......... 114 TATAAGAGAA CTCACATAAT GGTAGGAACT TATCCCAATA CCCTCCAAAG TCAATTACTC 65637 .......... .......... .......... .......... .......... .......... 114 AACACGTTTT CAAAACACTT GTATAGTCCT TTCTAATTGT CCATCCGTCT GGATATGGAA 65577 .......... .......... .......... .......... .......... .......... 114 GGTTGTACTA AATGTGAGCT GCTTGACCAA TTTAACATGC AACTTCCTCC AAAACTTAGA 65517 .......... .......... .......... .......... .......... .......... 114 AGTGAAAAGG GTTCCACGAT ATGAGATGAT GGAAAGGGGC ACACCATGCA ACTTTAGTAT 65457 .......... .......... .......... .......... .......... .......... 114 CTCCTTTACA TAAATCTTAG TCAATTGTTC AGCATTCTAA TCCACTCTGA CCGAGATAAC 65397 .......... .......... .......... .......... .......... .......... 114 GTGGACTGGT TGTAGTAAAC CTTTCAACCA CTACCCAAAC AGAATCAAAT TTCCCAAAAG 65337 .......... .......... .......... .......... .......... .......... 114 TCTTGAGGCT AACCACTAAG TACTGCTTAT ATATATATAT ATATATATAA AAAATCCTCT 65277 .......... .......... .......... .......... .......... .......... 114 CTTGCCTCTT GCTACTATTT TGCTGCGTCT TAGTTATCTT GGAATTTTAT TGATAACTTA 65217 .......... .......... .......... .......... .......... .......... 114 CTAGTTGTCT TTGTTATTGT TGATTAGTTT TAAGTTATAG GATGAACGAG AAAA-TGAAA 65158 | || | | ||| || |||| ||||| .......... .......... .......... ....TCAT-G TAAGAAAGAA AAAAATGAAA 139 A 65157 | A 140 hqPGS_C01HBa0163B20.1-_SGN-E357775- (72056 71957) ******************************************************************************** EST sequence 247 +strand 794 n (File: SGN-E352898+) 1 TTTGTTGAAC AAGCGGGTGT TCAGAATTAA GACAAAACAA GATAGATACA GAAGGTTCCA 61 AGATCATTTA GTGATTAAAG GATATTCACA AAGGAAAGGT GTTATTGAAA TATTTTCTCC 121 TTTTGTGAAG TTAACCTCTA TTCGAATTCT GTTGAGTATT GTTGCATCGG AGAATTTGCA 181 TCTAGAGCAA ATGGATGTAA AAACAACGTT TTTACATGGA GATCTGCACA AAGAGATATA 241 TATGAAACAA CCGGAAGGAT TTTTGGTTCC AAGCAAGGAT AACATGGTAT GAAACCTCAC 301 CAGGAACCTT GTATGGACTA AAGCAAGCAC CAAGGAAGTG GTACAAGAAG TTTGACTCCT 361 TCATGACCAA GAGTGGATTC TACAAAACTG AAAAGGATCC TTGTTGTTAC TTCAAGAAAT 421 ACACTGATTC ATATGTCGTT CTACTCTTGT ATGTGGATGA TATGTTAATT GCAGGATCTT 481 TTATGTGGGA GATTAAAAAT CTAAAGACAA CGTTGTCTGC AGCAATTGAA AGATTTGGGT 541 CCAGCGAAGC AGATTTTGGG GATGAAGATT TCCCGGCATA GATTTGCTGG CACTTTAAAT 601 CTATTTCAGG TGTTGTAAAT TGAGAAGGTG CTGAGCAGAT TCAGGGTTAA TGATTCTAAG 661 CCCAAGACTA CTCCATTAGA AAATCACTTT AAATTGTCAA AGGAGAAGCG CCCCAGAATG 721 GCAATGGAGT GTGATCATAT GGCACTTGTT TGATATGCTT TCAGCAGTGG GAGATTGATG 781 TATGCTATGG TCTG Predicted gene structure (within gDNA segment 75534 to 69248): Exon 1 73734 72931 ( 804 n); cDNA 1 794 ( 794 n); score: 0.861 MATCH C01HBa0163B20.1- SGN-E352898+ 0.861 804 1.013 C PGS_C01HBa0163B20.1-_SGN-E352898+ (73734 72931) Alignment (genomic DNA sequence = upper lines): TTTGTTAAAT AAGTGGGTGT TCAGAATCAA GAGTGAACCA GATGGCAAAA GAAGGTTCAA 73675 |||||| || ||| |||||| ||||||| || || ||| | ||| | | | |||||||| | TTTGTTGAAC AAGCGGGTGT TCAGAATTAA GACAAAACAA GATAGATACA GAAGGTTCCA 60 GGCTCGTTTA GTGGTTAAAG GATATTCACA AAGGAAAGGT ATTGATTATG CTTAAATATT 73615 | || |||| ||| |||||| |||||||||| |||||||||| || ||| | ||||||| AGATCATTTA GTGATTAAAG GATATTCACA AAGGAAAGGT GTT-ATT--G ---AAATATT 114 TTCTTCTGTT GTGAAGTTAG CCTCTATTCG AATTCTGTTG AGTGTTGTTG CATCGGAGAA 73555 |||| || || ||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| TTCTCCTTTT GTGAAGTTAA CCTCTATTCG AATTCTGTTG AGTATTGTTG CATCGGAGAA 174 TTTGCATCTA GAGCATATGG ATGTAAAAAC AGTGTTTTTA TATGGAGATA TGGACAAAGA 73495 |||||||||| ||||| |||| |||||||||| | ||||||| |||||||| || ||||||| TTTGCATCTA GAGCAAATGG ATGTAAAAAC AACGTTTTTA CATGGAGATC TGCACAAAGA 234 GATCTATATG CAGCAACCGG AAGGATTTGT AGTTCCAGGC AAGGAACACA TGGTGTGCAA 73435 ||| |||||| | ||||||| |||||||| | |||||| || ||||| ||| |||| || || GATATATATG AAACAACCGG AAGGATTTTT GGTTCCAAGC AAGGATAACA TGGTATGAAA 294 GCTCACCAGG -AGCTTGTAT GGACTAAAGC AAGCACCAAG GCAGTGGTAC AAGAAGTTTA 73376 ||||||||| | ||||||| |||||||||| |||||||||| | |||||||| ||||||||| CCTCACCAGG AACCTTGTAT GGACTAAAGC AAGCACCAAG GAAGTGGTAC AAGAAGTTTG 354 ACTCCTTCAT GACCAAGGGT GGATTCTGCA AAGCTGAAAA GGATCCTTGT TGTTACTTCA 73316 |||||||||| ||||||| || ||||||| || || ||||||| |||||||||| |||||||||| ACTCCTTCAT GACCAAGAGT GGATTCTACA AAACTGAAAA GGATCCTTGT TGTTACTTCA 414 AGAAATACAC TGATTCATAT GTCGTTCTAC TCTTGTATAT GGATGATATG TTGATTGTAA 73256 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| || |||| | AGAAATACAC TGATTCATAT GTCGTTCTAC TCTTGTATGT GGATGATATG TTAATTGCAG 474 GATCTAGTAT GAGAGAGATT AACAATCTGA AGACAAGGTT GTCTACAGCA TTTGAGATGA 73196 ||||| ||| | | |||||| || ||||| | |||||| ||| |||| ||||| || || | GATCTTTTAT GTGGGAGATT AAAAATCTAA AGACAACGTT GTCTGCAGCA ATT--GA--A 530 CAGATTTGGG TCCAGCAAAA TAGATTTTGG GGATGGAGAT TTCTCGGGAT AGATCTGTTG 73136 ||||||||| |||||| || ||||||||| ||||| |||| ||| ||| || |||| || || -AGATTTGGG TCCAGCGAAG CAGATTTTGG GGATGAAGAT TTCCCGGCAT AGATTTGCTG 589 GCACTTTAAA TCTATCTCAG AAGTTGTACA TTGAGAAGGT ACTGAGCAGA TTCAGGGTTA 73076 |||||||||| ||||| |||| |||||| | |||||||||| ||||||||| |||||||||| GCACTTTAAA TCTATTTCAG GTGTTGTAAA TTGAGAAGGT GCTGAGCAGA TTCAGGGTTA 649 ATGATGCTAA ACCCAGGACT ACTCCATTGG CAAATCACTT TAAATTGTCA AAGGAGCAGT 73016 ||||| |||| |||| |||| |||||||| | ||||||||| |||||||||| |||||| || ATGATTCTAA GCCCAAGACT ACTCCATTAG AAAATCACTT TAAATTGTCA AAGGAGAAG- 708 CACCCAAGAC TTCCGA-GGA GCGTGATCAC ATGGCACTTG TTCCATATGC -TTCAGCAGT 72958 | ||| ||| | | | ||| | ||||||| |||||||||| || |||||| |||||||| CGCCCCAGAA TGGCAATGGA GTGTGATCAT ATGGCACTTG TTTGATATGC TTTCAGCAG- 767 TGGTAGTTTG ATGTATGTTA TAGTCTG 72931 ||| || ||| ||||||| || | ||||| TGGGAGATTG ATGTATGCTA TGGTCTG 794 hqPGS_C01HBa0163B20.1-_SGN-E352898+ (73734 72931) ******************************************************************************** EST sequence 51 -strand 622 n (File: SGN-E306651-) 1 CTTATGTTCA TGTTGATCTA GAAAAGAGAG ACAAGCTTGA TGCCAAGGCT GTGAAGTGTT 61 ACTTCATAGG CTATGGTTCT GATTTGTTTG GTTACAGGTT TTGGGATGAC AAGAACAGAA 121 AGATCCTGAG ACATTGTGAT GTGATATTTG ATGAGTCTGT CCTGTACAAG GACAGAGAGC 181 AGAAGTTTCT AGAGATTACC AAGCAAGTGA GAGTTGAGGT TGAGTTGGAG AAGAGTAACC 241 CCCAGATATG TCAAAGCAGA TTCTATAATA CCTTCATTGA TGATTTCAGC AGGAAGGTAT 301 GAGTTTACTT CTTGAAGCAT AAGTCAGATG TGTTTGCAAC TTTCAAGAAG TGGAAAGCTG 361 AAGTTGAGAA TCAAACCGGT TTGAAAGTCA AATGCCTAAG GTCTTACAAT GGAGGAGAGG 421 ATGACAAATC AGAGTTCAAG GCATCTTGTG CAGCTGAGGG AATCAAATTG ATGAGAACAG 481 TTCCTTGTAA GGCAAGGCAG AATGGAATTG CTGAGTGGAT GAACAGAACA TTGAATGAGC 541 GTGCAAGGAG TATGAGGATA CACTATGGGC TGCCCAAAAC ATTTTGGGCG GTGTTGTGAG 601 CACACCTGCA TACTTGATCA AC Predicted gene structure (within gDNA segment 78004 to 73392): Exon 1 74726 74361 ( 366 n); cDNA 257 621 ( 365 n); score: 0.926 MATCH C01HBa0163B20.1- SGN-E306651- 0.926 366 0.588 C PGS_C01HBa0163B20.1-_SGN-E306651- (74726 74361) Alignment (genomic DNA sequence = upper lines): CAGATTCTAT GTTACCTTCA TTGATGATTT CAGCAGGAAG GTATCGGTTT ACTTCTTGAA 74667 |||||||||| |||||||| |||||||||| |||||||||| |||| |||| |||||||||| CAGATTCTAT AATACCTTCA TTGATGATTT CAGCAGGAAG GTATGAGTTT ACTTCTTGAA 316 GCATAAGTTA GATGTGTTTG CAACTTTCAA GAAGTGGAAA GCTGAAGTTG AGAATCAGAT 74607 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | GCATAAGTCA GATGTGTTTG CAACTTTCAA GAAGTGGAAA GCTGAAGTTG AGAATCAAAC 376 CGGTTTGAAA GTCAAATGCC TAAGGTCTGA CAATGGAGGA GAGTATGACA AATCAGAGTT 74547 |||||||||| |||||||||| |||||||| | |||||||||| ||| |||||| |||||||||| CGGTTTGAAA GTCAAATGCC TAAGGTCTTA CAATGGAGGA GAGGATGACA AATCAGAGTT 436 CAAGGCATTC TGTGCAGTTG ACGGAATCAG ATTGATGAGA ACAGTTCCTG GTGAGGCAAG 74487 |||||||| ||||||| || | ||||||| |||||||||| ||||||||| || ||||||| CAAGGCATCT TGTGCAGCTG AGGGAATCAA ATTGATGAGA ACAGTTCCTT GTAAGGCAAG 496 GCAGAATAGA ATTGTTGAGA GGATGAACAG AACATTGAAT GAGCTTGAAA GGAGTATGAG 74427 ||||||| || |||| |||| |||||||||| |||||||||| |||| || || |||||||||| GCAGAATGGA ATTGCTGAGT GGATGAACAG AACATTGAAT GAGCGTGCAA GGAGTATGAG 556 GATACACTGT GGGCTGCCCA AAACACTTTG GGCGGATGTT GTGAGCAAAG TTGCATACTT 74367 |||||||| | |||||||||| ||||| |||| ||||| |||| ||||||| | ||||||||| GATACACTAT GGGCTGCCCA AAACATTTTG GGCGG-TGTT GTGAGCACAC CTGCATACTT 615 GATCAA 74361 |||||| GATCAA 621 hqPGS_C01HBa0163B20.1-_SGN-E306651- (74726 74361) ******************************************************************************** EST sequence 230 +strand 632 n (File: SGN-E548332+) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CATCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACTA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TTTATGTCAA AA Predicted gene structure (within gDNA segment 77957 to 75045): Exon 1 76287 75748 ( 540 n); cDNA 80 629 ( 550 n); score: 0.876 MATCH C01HBa0163B20.1- SGN-E548332+ 0.876 540 0.854 C PGS_C01HBa0163B20.1-_SGN-E548332+ (76287 75748) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTT TTAAAAGTTC TTGTGTT-TT CATTCATCTA GTGTGTGTGC TTTAATTCGA 76229 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| | ||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA TCACTGAAGA TGGATAGTTT 76169 ||||||||| ||| |||||| | |||||||| | |||||||| |||| ||||| ||||||||| TCCTAACAAA TGGTATCAGA GCTAAGGAGA TTCAACACGA TCACAGAAGA TGGATAGTTC 199 GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT TTCTGGAAGA TGCAGATCAA 76109 |||||||||| |||||||||| ||||||||| | |||| ||| |||||||||| |||||||| | GAAGCTTGGA ATCGAGAAGT TTGATGGATT CAATTTCAGT TTCTGGAAGA TGCAGATCGA 259 AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC AGGGTGAAAC CGGAATCCAT 76049 |||||||||| |||||||||| || |||| | ||||||||| ||||||| || ||||||| AGATTATCTG TACCAGAAAG ATTTTCACGA GCCGTTGACC GGGGTGAAGA CGAAATCCAT 319 GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTGACTTT 75989 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GACTGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTCACTTT 379 GTCAAGAAAC GTGGCGTTCA ACAT--TG-T GAAGACG--T ---T-CGGTC TGTTGAAGGA 75938 |||||||||| ||||||||| |||| || ||||| | | | ||||| ||||||||| GTCAAGAAAC ATGGCGTTCA ACATCGTGAA GAAGAAGACT ACATCCGGTC TGTTGAAGGC 439 ACTGTCAAAC ATGTATGAAA AACCATCGGC TATGAACAAG GTATATTTGA TGCGTAGATT 75878 ||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ACTATCAAAT ATGTATGAAA AACCATCGGC TATGAACAAA GTATATTTGA TGCGTAGATT 499 GTTCAATTTA CAGATGTATG AGAATGGATC TGTTTCTGAT CATATAAACG AGTTTAATAT 75818 |||||||||| ||||||| || | | ||||| ||||||||| ||||||||| |||| ||||| GTTCAATTTA CAGATGTTTG AAACTGGATA CGTTTCTGAT CATATAAACT AGTTCAATAT 559 GATTGTGAGT CAACTCAATT CTGTGGATAT CAATTTCGAA GATGAAATTA AGGCGTTGAT 75758 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GATTGTGAGT CAACTCAATT CTGTGGATAT TAATTTCGAA GATGAAATTA AGGCGTTGAT 619 TTTGTTGTCA 75748 ||| ||||| TTTTATGTCA 629 hqPGS_C01HBa0163B20.1-_SGN-E548332+ (76287 75748) ******************************************************************************** EST sequence 228 +strand 638 n (File: SGN-E540110+) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TTGATGTCAA AAAAAAAA Predicted gene structure (within gDNA segment 77957 to 74994): Exon 1 76287 75749 ( 539 n); cDNA 80 628 ( 549 n); score: 0.879 PPA cDNA 629 638 MATCH C01HBa0163B20.1- SGN-E540110+ 0.879 539 0.845 C PGS_C01HBa0163B20.1-_SGN-E540110+ (76287 75749) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTT TTAAAAGTTC TTGTGTT-TT CATTCATCTA GTGTGTGTGC TTTAATTCGA 76229 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| | ||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA TCACTGAAGA TGGATAGTTT 76169 ||||||||| ||| |||||| | |||||||| | |||||||| |||| ||||| ||||||||| TCCTAACAAA TGGTATCAGA GCTAAGGAGA TTCAACACGA TCACAGAAGA TGGATAGTTC 199 GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT TTCTGGAAGA TGCAGATCAA 76109 |||||||||| |||||||||| ||||||||| | |||| ||| |||||||||| |||||||| | GAAGCTTGGA ATCGAGAAGT TTGATGGATT CAATTTCAGT TTCTGGAAGA TGCAGATCGA 259 AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC AGGGTGAAAC CGGAATCCAT 76049 |||||||||| |||||||||| || |||| | ||||||||| ||||||| || ||||||| AGATTATCTG TACCAGAAAG ATTTTCACGA GCCGTTGACC GGGGTGAAGA CGAAATCCAT 319 GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTGACTTT 75989 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GACTGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTCACTTT 379 GTCAAGAAAC GTGGCGTTCA ACAT--T--- G-TGAAG--- ACGTTCGGTC TGTTGAAGGA 75938 |||||||||| ||||||||| |||| | | |||| |||| ||||| ||||||||| GTCAAGAAAC ATGGCGTTCA ACATCGTGAA GAAGAAGACT ACGTCCGGTC TGTTGAAGGC 439 ACTGTCAAAC ATGTATGAAA AACCATCGGC TATGAACAAG GTATATTTGA TGCGTAGATT 75878 ||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ACTATCAAAT ATGTATGAAA AACCATCGGC TATGAACAAA GTATATTTGA TGCGTAGATT 499 GTTCAATTTA CAGATGTATG AGAATGGATC TGTTTCTGAT CATATAAACG AGTTTAATAT 75818 |||||||||| ||||||| || | | ||||| ||||||||| |||||||||| |||| ||||| GTTCAATTTA CAGATGTTTG AAACTGGATA CGTTTCTGAT CATATAAACG AGTTCAATAT 559 GATTGTGAGT CAACTCAATT CTGTGGATAT CAATTTCGAA GATGAAATTA AGGCGTTGAT 75758 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GATTGTGAGT CAACTCAATT CTGTGGATAT TAATTTCGAA GATGAAATTA AGGCGTTGAT 619 TTTGTTGTC 75749 |||| |||| TTTGATGTC 628 hqPGS_C01HBa0163B20.1-_SGN-E540110+ (76287 75749) ******************************************************************************** EST sequence 31 -strand 636 n (File: SGN-E540114-) 1 TAATTTTTGA GTTGCCGCGA CGTTTCCCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAAATAA GGCGTTGATT TTGCCTCTTT TAAGAA Predicted gene structure (within gDNA segment 77967 to 75024): Exon 1 76287 75755 ( 533 n); cDNA 80 622 ( 543 n); score: 0.878 MATCH C01HBa0163B20.1- SGN-E540114- 0.878 533 0.838 C PGS_C01HBa0163B20.1-_SGN-E540114- (76287 75755) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTT TTAAAAGTTC TTGTGTT-TT CATTCATCTA GTGTGTGTGC TTTAATTCGA 76229 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| | ||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA TCACTGAAGA TGGATAGTTT 76169 ||||||||| ||| |||||| | |||||||| | |||||||| |||| ||||| ||||||||| TCCTAACAAA TGGTATCAGA GCTAAGGAGA TTCAACACGA TCACAGAAGA TGGATAGTTC 199 GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT TTCTGGAAGA TGCAGATCAA 76109 |||||||||| |||||||||| ||||||||| | |||| ||| |||||||||| |||||||| | GAAGCTTGGA ATCGAGAAGT TTGATGGATT CAATTTCAGT TTCTGGAAGA TGCAGATCGA 259 AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC AGGGTGAAAC CGGAATCCAT 76049 |||||||||| |||||||||| || |||| | ||||||||| ||||||| || ||||||| AGATTATCTG TACCAGAAAG ATTTTCACGA GCCGTTGACC GGGGTGAAGA CGAAATCCAT 319 GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTGACTTT 75989 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GACTGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTCACTTT 379 GTCAAGAAAC GTGGCGTTCA ACAT--T--- G-TGAAG--- ACGTTCGGTC TGTTGAAGGA 75938 |||||||||| ||||||||| |||| | | |||| |||| ||||| ||||||||| GTCAAGAAAC ATGGCGTTCA ACATCGTGAA GAAGAAGACT ACGTCCGGTC TGTTGAAGGC 439 ACTGTCAAAC ATGTATGAAA AACCATCGGC TATGAACAAG GTATATTTGA TGCGTAGATT 75878 ||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ACTATCAAAT ATGTATGAAA AACCATCGGC TATGAACAAA GTATATTTGA TGCGTAGATT 499 GTTCAATTTA CAGATGTATG AGAATGGATC TGTTTCTGAT CATATAAACG AGTTTAATAT 75818 |||||||||| ||||||| || | | ||||| ||||||||| |||||||||| |||| ||||| GTTCAATTTA CAGATGTTTG AAACTGGATA CGTTTCTGAT CATATAAACG AGTTCAATAT 559 GATTGTGAGT CAACTCAATT CTGTGGATAT CAATTTCGAA GATGAAATTA AGGCGTTGAT 75758 |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| GATTGTGAGT CAACTCAATT CTGTGGATAT TAATTTCGAA GATGAAAATA AGGCGTTGAT 619 TTT 75755 ||| TTT 622 hqPGS_C01HBa0163B20.1-_SGN-E540114- (76287 75755) ******************************************************************************** EST sequence 29 -strand 637 n (File: SGN-E540107-) 1 TAATTTTTGA GTTGCCGCGA CGTTTCGCCC TATTTTTACA GAGTAGGGAT GTAAACAGTT 61 ACCACGAAAT ATTGAGTTTT CTCTTTCTCT TGAAAGTTCT TGTGTTCTTT ATTCATCTAG 121 TGTGTGTGCG TGAATTCGAT CCTAACAAAT GGTATCAGAG CTAAGGAGAT TCAACACGAT 181 CACAGAAGAT GGATAGTTCG AAGCTTGGAA TCGAGAAGTT TGATGGATTC AATTTCAGTT 241 TCTGGAAGAT GCAGATCGAA GATTATCTGT ACCAGAAAGA TTTTCACGAG CCGTTGACCG 301 GGGTGAAGAC GAAATCCATG ACTGAGGAGA AGTGGAAACT CAAGGATCGC CAGGCTCTAG 361 GGTTGATCCG GTTCACTTTG TCAAGAAACA TGGCGTTCAA CATCGTGAAG AAGAAGACTA 421 CGTCCGGTCT GTTGAAGGCA CTATCAAATA TGTATGAAAA ACCATCGGCT ATGAACAAAG 481 TATATTTGAT GCGTAGATTG TTCAATTTAC AGATGTTTGA AACTGGATAC GTTTCTGATC 541 ATATAAACGA GTTCAATATG ATTGTGAGTC AACTCAATTC TGTGGATATT AATTTCGAAG 601 ATGAAATTAA GGCGTTGATT TGATGTCAAA AAAAAAA Predicted gene structure (within gDNA segment 77967 to 74996): Exon 1 76287 75756 ( 532 n); cDNA 80 621 ( 542 n); score: 0.880 PPA cDNA 628 637 MATCH C01HBa0163B20.1- SGN-E540107- 0.880 532 0.835 C PGS_C01HBa0163B20.1-_SGN-E540107- (76287 75756) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTT TTAAAAGTTC TTGTGTT-TT CATTCATCTA GTGTGTGTGC TTTAATTCGA 76229 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| | ||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 139 TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA TCACTGAAGA TGGATAGTTT 76169 ||||||||| ||| |||||| | |||||||| | |||||||| |||| ||||| ||||||||| TCCTAACAAA TGGTATCAGA GCTAAGGAGA TTCAACACGA TCACAGAAGA TGGATAGTTC 199 GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT TTCTGGAAGA TGCAGATCAA 76109 |||||||||| |||||||||| ||||||||| | |||| ||| |||||||||| |||||||| | GAAGCTTGGA ATCGAGAAGT TTGATGGATT CAATTTCAGT TTCTGGAAGA TGCAGATCGA 259 AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC AGGGTGAAAC CGGAATCCAT 76049 |||||||||| |||||||||| || |||| | ||||||||| ||||||| || ||||||| AGATTATCTG TACCAGAAAG ATTTTCACGA GCCGTTGACC GGGGTGAAGA CGAAATCCAT 319 GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTGACTTT 75989 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GACTGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTCACTTT 379 GTCAAGAAAC GTGGCGTTCA ACAT--T--- G-TGAAG--- ACGTTCGGTC TGTTGAAGGA 75938 |||||||||| ||||||||| |||| | | |||| |||| ||||| ||||||||| GTCAAGAAAC ATGGCGTTCA ACATCGTGAA GAAGAAGACT ACGTCCGGTC TGTTGAAGGC 439 ACTGTCAAAC ATGTATGAAA AACCATCGGC TATGAACAAG GTATATTTGA TGCGTAGATT 75878 ||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ACTATCAAAT ATGTATGAAA AACCATCGGC TATGAACAAA GTATATTTGA TGCGTAGATT 499 GTTCAATTTA CAGATGTATG AGAATGGATC TGTTTCTGAT CATATAAACG AGTTTAATAT 75818 |||||||||| ||||||| || | | ||||| ||||||||| |||||||||| |||| ||||| GTTCAATTTA CAGATGTTTG AAACTGGATA CGTTTCTGAT CATATAAACG AGTTCAATAT 559 GATTGTGAGT CAACTCAATT CTGTGGATAT CAATTTCGAA GATGAAATTA AGGCGTTGAT 75758 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GATTGTGAGT CAACTCAATT CTGTGGATAT TAATTTCGAA GATGAAATTA AGGCGTTGAT 619 TT 75756 || TT 621 hqPGS_C01HBa0163B20.1-_SGN-E540107- (76287 75756) ******************************************************************************** EST sequence 238 +strand 574 n (File: SGN-E286267+) 1 AATTTTTGAG TTGCCGCGAC GTTTCGCCCT ATTTTTACAG AGTAGGGATG TAAACAGTTA 61 CCACGAAATA TTGAGTTTTC TCTTTCTCTT GAAAGTTCTT GTGTTCTTTA TTCATCTAGT 121 GTGTGTGCGT GAATTCGATC CTAACAAATG GTATCAGAGC TAAGGAGATT CAACACGATC 181 ACAGAAGATG GATAGTTCGA AGCTTGGAAT CGAGAAGTTT GATGGATTCA ATTTCAGTTT 241 CTGGAAGATG CAGATCGAAG ATTATCTGTA CCAGAAAGAT TTTCACGAGC CGTTGACCGG 301 GGTGAAGACG AAATCCATGA CTGAGGAGAA GTGGAAACTC AAGGATCGCC AGGCTCTAGG 361 GTTGATCCGG TTCACTTTGT CAAGAAACAT GGCGTTCAAC ATCGTGAAGA AGAAGACTAC 421 GTCCGGTCTG TTGAAGGCAC TATCAAATAT GTATGAAAAA CCATCGGCTA TGAACAAAGT 481 ATATTTGATG CGTAGATTGT TCAATTTACA GATGTTTGAA ACTGGATACG TTTCTGATCA 541 TATAAACGAG TTCAATATGA TTTGGAGTCA ACTC Predicted gene structure (within gDNA segment 77947 to 74994): Exon 1 76287 75802 ( 486 n); cDNA 79 574 ( 496 n); score: 0.866 MATCH C01HBa0163B20.1- SGN-E286267+ 0.866 486 0.847 C PGS_C01HBa0163B20.1-_SGN-E286267+ (76287 75802) Alignment (genomic DNA sequence = upper lines): TCTCTTTCTT TTAAAAGTTC TTGTGTT-TT CATTCATCTA GTGTGTGTGC TTTAATTCGA 76229 ||||||||| || ||||||| ||||||| || ||||||||| |||||||||| | ||||||| TCTCTTTCTC TTGAAAGTTC TTGTGTTCTT TATTCATCTA GTGTGTGTGC GTGAATTCGA 138 TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA TCACTGAAGA TGGATAGTTT 76169 ||||||||| ||| |||||| | |||||||| | |||||||| |||| ||||| ||||||||| TCCTAACAAA TGGTATCAGA GCTAAGGAGA TTCAACACGA TCACAGAAGA TGGATAGTTC 198 GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT TTCTGGAAGA TGCAGATCAA 76109 |||||||||| |||||||||| ||||||||| | |||| ||| |||||||||| |||||||| | GAAGCTTGGA ATCGAGAAGT TTGATGGATT CAATTTCAGT TTCTGGAAGA TGCAGATCGA 258 AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC AGGGTGAAAC CGGAATCCAT 76049 |||||||||| |||||||||| || |||| | ||||||||| ||||||| || ||||||| AGATTATCTG TACCAGAAAG ATTTTCACGA GCCGTTGACC GGGGTGAAGA CGAAATCCAT 318 GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTGACTTT 75989 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GACTGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA GGGTTGATCC GGTTCACTTT 378 GTCAAGAAAC GTGGCGTTCA ACAT--T--- G-TGAAG--- ACGTTCGGTC TGTTGAAGGA 75938 |||||||||| ||||||||| |||| | | |||| |||| ||||| ||||||||| GTCAAGAAAC ATGGCGTTCA ACATCGTGAA GAAGAAGACT ACGTCCGGTC TGTTGAAGGC 438 ACTGTCAAAC ATGTATGAAA AACCATCGGC TATGAACAAG GTATATTTGA TGCGTAGATT 75878 ||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ACTATCAAAT ATGTATGAAA AACCATCGGC TATGAACAAA GTATATTTGA TGCGTAGATT 498 GTTCAATTTA CAGATGTATG AGAATGGATC TGTTTCTGAT CATATAAACG AGTTTAATAT 75818 |||||||||| ||||||| || | | ||||| ||||||||| |||||||||| |||| ||||| GTTCAATTTA CAGATGTTTG AAACTGGATA CGTTTCTGAT CATATAAACG AGTTCAATAT 558 GATTGTGAGT CAACTC 75802 |||| |||| |||||| GATTTGGAGT CAACTC 574 hqPGS_C01HBa0163B20.1-_SGN-E286267+ (76287 75802) ******************************************************************************** EST sequence 163 -strand 255 n (File: SGN-E257955-) 1 GAAGTGGAAA CTCAAGGATC GCCAGGCTCT AGGGTTGATC CGGTTCACTT TGTCAAGAAA 61 CATGGCGTTC AACATCGTGA AGAAGAAGAC TACGTCCGGT CTGTTGAAGG CACTATCAAA 121 TATGTATGAA AAACCATCGG CTATGAACAA AGTATATTTG ATGCGTAGAT TGTTCAATTT 181 ACAGATGTTT GAAACTGGAT ACGTTTCTGA TCAAAAAAAA AAAAAAAAAA AAAAAAAAAA 241 AACGCGAGAC TAGTT Predicted gene structure (within gDNA segment 76649 to 74591): Exon 1 76039 75837 ( 203 n); cDNA 1 212 ( 212 n); score: 0.825 PPA cDNA 213 243 MATCH C01HBa0163B20.1- SGN-E257955- 0.825 203 0.796 C PGS_C01HBa0163B20.1-_SGN-E257955- (76039 75837) Alignment (genomic DNA sequence = upper lines): GAAGTGGAAA CTCAAGGATC GCCAGGCTCT AGGGTTGATC CGGTTGACTT TGTCAAGAAA 75980 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| GAAGTGGAAA CTCAAGGATC GCCAGGCTCT AGGGTTGATC CGGTTCACTT TGTCAAGAAA 60 CGTGGCGTTC AACAT--T-- -G-TGAAGA- --CGTTCGGT CTGTTGAAGG AACTGTCAAA 75929 | |||||||| ||||| | | ||||| ||| |||| |||||||||| ||| ||||| CATGGCGTTC AACATCGTGA AGAAGAAGAC TACGTCCGGT CTGTTGAAGG CACTATCAAA 120 CATGTATGAA AAACCATCGG CTATGAACAA GGTATATTTG ATGCGTAGAT TGTTCAATTT 75869 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TATGTATGAA AAACCATCGG CTATGAACAA AGTATATTTG ATGCGTAGAT TGTTCAATTT 180 ACAGATGTAT GAGAATGGAT CTGTTTCTGA TC 75837 |||||||| | || | ||||| |||||||| || ACAGATGTTT GAAACTGGAT ACGTTTCTGA TC 212 hqPGS_C01HBa0163B20.1-_SGN-E257955- (76039 75837) ******************************************************************************** EST sequence 213 +strand 772 n (File: SGN-E547511+) 1 TTTTTTTTTT TTTTTTTTTT TTTTAGGAAA TATAATTTNT GAATAATTAG AAAAAATTAC 61 AGGGTNGAAT GGTATATGCA ATTACACTCT TCATCATGCC AGCTTCATAG GGAATATCAA 121 ACACTGGTAA CCATGGCTGT TGTGTATTAA TGAATTTACC GGCAGTGAAG CTGTTAATAA 181 CGTCTCCTGA AATATCCTTT TGGTAACCTC TCCATGTGGA GACTCTTTTG TCAAGTGCAG 241 CACCTGGTCC TCTGTTCTGA TACTCTGCAT AAAAACATGT GTGTATTCCA AAATCAGTTG 301 TGTTCCATGG TGACCATCCT GATGGATCGA CGAATCCATC GATGTTTGAT TGCATTATGA 361 TGGTCTTGGA AAACTCCTTC CATGGACGTC CAAGATAGAC TTTGACTGGT GGATTGGCGC 421 TAGTGAGTGC TGGATCAGCC TTGATGTCAC AATTCTGGAT AACGAATGTA CCAAAGGAAT 481 CTTTTCTCAT CCTTCCTTGA GCAGTGATCA TGCAAGCTTG ATTAGGACCT GGTTTCCTCA 541 CAATCAATTT GCAGTTTTGG AAAACAGCAC TTGCATCACC AAACAAGAAA TCAATGGTGC 601 CTGTAATGGT ACAATCACGA TAAAATTGTC TTCCTGAGTG AGCGTATAAC GTGTCTTGGT 661 AACCATCGAT ATTGCAGTTG TAGAGAACAG CCCTATCGGC ATTAATTCTC AATGCAACGG 721 CTTGTTCTTT TGTGGGTCCT GCTGTGTTTT CATACCCATG TCCTTCATAA CG Predicted gene structure (within gDNA segment 79394 to 72248): Exon 1 76959 76576 ( 384 n); cDNA 80 473 ( 394 n); score: 0.786 Intron 1 76575 74694 (1882 n); Pd: 0.990 (s: 0.72), Pa: 0.892 (s: 0) Exon 2 74693 74688 ( 6 n); cDNA 474 479 ( 6 n); score: 0.833 PPA cDNA 24 1 MATCH C01HBa0163B20.1- SGN-E547511+ 0.786 390 0.505 C PGS_C01HBa0163B20.1-_SGN-E547511+ (76959 76576,74693 74688) Alignment (genomic DNA sequence = upper lines): AATTAGAC-C TTCATAATGC CAGGCTCAAA GGGAATATCA CTCTTGGGTA GCCAAGGGTC 76901 ||||| || | ||||| |||| ||| ||| | |||||||||| | |||| ||| || | AATTACACTC TTCATCATGC CAGCTTCATA GGGAATATCA AACACTGGTA ACCATGGCTG 139 TCTTGTGTTG ATGAAATTGC CGTCAATGAA TTGGTTAATA GTGTCTCCTG AAATTCCCTT 76841 | ||| || ||||| || | || || |||| ||||||| |||||||| |||| |||| TTGTGTATTA ATGAATTTAC CGGCAGTGAA GCTGTTAATA ACGTCTCCTG AAATATCCTT 199 TTGGTAACCT CTCCATGTTG AGATTTTTTT GTCAAGTGCA GCACCTGGTT CTCTGTTCTG 76781 |||||||||| |||||||| | ||| | |||| |||||||||| ||||||||| |||||||||| TTGGTAACCT CTCCATGTGG AGACTCTTTT GTCAAGTGCA GCACCTGGTC CTCTGTTCTG 259 ATACTCTGCA T-AAAACATG TGTGTTTTCC AAAATTAGTT GTGTTCCATG GTGACCATCC 76722 |||||||||| | |||||||| ||||| |||| ||||| |||| |||||||||| |||||||||| ATACTCTGCA TAAAAACATG TGTGTATTCC AAAATCAGTT GTGTTCCATG GTGACCATCC 319 TGATGGATCG ATGAATGCAT CAATGTTTGA TTGCATTATG ATGGTCTTGG AATACTCCTT 76662 |||||||||| | |||| ||| | |||||||| |||||||||| |||||||||| || ||||||| TGATGGATCG ACGAATCCAT CGATGTTTGA TTGCATTATG ATGGTCTTGG AAAACTCCTT 379 CCATGGACGT CCAATATAGG C-TT---T-- T--AATGGTG CTAGGGAACC CTGCCTGAGG 76610 |||||||||| |||| |||| | || | | | ||| | |||| || ||| | || CCATGGACGT CCAAGATAGA CTTTGACTGG TGGATTGGCG CTAGTGAGTG CTGGATCAGC 439 CTTGATGTCA CAATTCTGGA TAACTAATCC AGAGGTACTA TCTTGTTTAT GTTAAGTAGT 76550 |||||||||| |||||||||| |||| ||| | CTTGATGTCA CAATTCTGGA TAACGAATGT ACCA...... .......... .......... 473 GGAGCCTGAT TAATATATAT AACTCTTTAC GCAATTTCCG CGGTGAGGTT ACCGGGGGTT 76490 .......... .......... .......... .......... .......... .......... 473 ATGGGGGTGG GAGCCCCCCA TCCGAAGGAG GGGTTCAGGG CAGCGACCCG ACCTAAATTT 76430 .......... .......... .......... .......... .......... .......... 473 TAGGCTTTCC TATTTATTCT CTATTTATTC TCTGTAACCA AAAAAACTCT GATTTATTAA 76370 .......... .......... .......... .......... .......... .......... 473 TATAAATATA CCTCACGACC GTGGAAGTTT ACTCACGGGG TGTTACCACA AAATATTGGG 76310 .......... .......... .......... .......... .......... .......... 473 TTTTCTCTTT CTAGATCTCT CATCTCTTTC TTTTAAAAGT TCTTGTGTTT TCATTCATCT 76250 .......... .......... .......... .......... .......... .......... 473 AGTGTGTGTG CTTTAATTCG ATCCTAACAA CTGGCATCAG AGATAAGGAG ATACAACACG 76190 .......... .......... .......... .......... .......... .......... 473 ATCACTGAAG ATGGATAGTT TGAAGCTTGG AATCGAGAAG TTTGATGGAT CCGATTTTAG 76130 .......... .......... .......... .......... .......... .......... 473 TTTCTGGAAG ATGCAGATCA AAGATTATCT GTACCAGAAA GATCTTCATA AACCGTTGAC 76070 .......... .......... .......... .......... .......... .......... 473 CAGGGTGAAA CCGGAATCCA TGACGGAGGA GAAGTGGAAA CTCAAGGATC GCCAGGCTCT 76010 .......... .......... .......... .......... .......... .......... 473 AGGGTTGATC CGGTTGACTT TGTCAAGAAA CGTGGCGTTC AACATTGTGA AGACGTTCGG 75950 .......... .......... .......... .......... .......... .......... 473 TCTGTTGAAG GAACTGTCAA ACATGTATGA AAAACCATCG GCTATGAACA AGGTATATTT 75890 .......... .......... .......... .......... .......... .......... 473 GATGCGTAGA TTGTTCAATT TACAGATGTA TGAGAATGGA TCTGTTTCTG ATCATATAAA 75830 .......... .......... .......... .......... .......... .......... 473 CGAGTTTAAT ATGATTGTGA GTCAACTCAA TTCTGTGGAT ATCAATTTCG AAGATGAAAT 75770 .......... .......... .......... .......... .......... .......... 473 TAAGGCGTTG ATTTTGTTGT CATCTCTGCC CGAGTCTTGG GATACTATTG TTGCTGCGAT 75710 .......... .......... .......... .......... .......... .......... 473 TCGCAGTTCC CGTGGATCTG AGAAACTGAA GTTTGATAAA ATCCATGATG TTGTTCTTAG 75650 .......... .......... .......... .......... .......... .......... 473 CGAAAGTATT CACAAATGAG AAGTGGGAAA TTCATTGGGC AGTGCTCTCA GCGTTGATCG 75590 .......... .......... .......... .......... .......... .......... 473 AAGGGGGAGA AGTAAGACGA AAGGCCAAAA TCAACATGGT CGATCAAAAT CAAAGAATCG 75530 .......... .......... .......... .......... .......... .......... 473 AGAAAAATCC CTGAAGATCA AACGTGACTT GTTGGAACTG TAAAGAAAAA GGGCACTTTT 75470 .......... .......... .......... .......... .......... .......... 473 AGACGAACTA TACAAAGCAA AAGAAGAAAC AAAATCACAA AATTTGGAGA TGACAATGAT 75410 .......... .......... .......... .......... .......... .......... 473 TCTGTAAATT CATCAGAGGA CATTGGGGAT GCTCTAATCC TTAGTGTGAA TAGCCCGGTT 75350 .......... .......... .......... .......... .......... .......... 473 GAATCATGGA TTTTGGATTC TGGTGCATCT TTCCATTCAT CTTCAAGCAA GGAGTTGTTC 75290 .......... .......... .......... .......... .......... .......... 473 CAAAATTTCA AATCTGGAAA TTTTGGAAAA GTATATCTTG TTGACAATAA AGCCTTAGAG 75230 .......... .......... .......... .......... .......... .......... 473 ATTGAAGGAA AGGGGGATGT TTGCATAAAG ACCACCTCGG GAAACCAATG GACATTGGAG 75170 .......... .......... .......... .......... .......... .......... 473 GATGTCAGAT ATATTCCTGG GATCAACAAA AAATTGATCT CTGTCGGTCA GTTGGATAGC 75110 .......... .......... .......... .......... .......... .......... 473 ACGGGATATG CAGCAGAGTT AGGGAAATGT TCGTGGAAGA TCATGAAAGT TGCTATGGTA 75050 .......... .......... .......... .......... .......... .......... 473 GTAGCTCGTG GCACCAAATC TGGAACCTTG TACACCACTG CAGAGTGTAT AAACTAGGTC 74990 .......... .......... .......... .......... .......... .......... 473 GCTGTTGCTG AAGGTGTTTC CGGTTCATGT CTGTGGCACA ACAGACTTGG ACACATGAGT 74930 .......... .......... .......... .......... .......... .......... 473 ACTAAAGGAA TGAAGATGTT GGTTGCAAAA GGAGAATTAG AGGGTCTGAA GTCTGTTGAT 74870 .......... .......... .......... .......... .......... .......... 473 ATGGGTCTTT GCGAGAGCTG TGTTATGGGA AAACAGAAAA GAGTAAGCTT CACAAGGACT 74810 .......... .......... .......... .......... .......... .......... 473 CCTAGAGAGC CAAAGAAAGT GCGGTTGGAA ATGGTCCATA TAGATGTTTG GGGACCATAT 74750 .......... .......... .......... .......... .......... .......... 473 CCAGTATCAT TACTTGGAGG ATCCAGATTC TATGTTACCT TCATTGATGA TTTCAGCAGG 74690 ||| .......... .......... .......... .......... .......... ......AAGG 477 AA 74688 || AA 479 hqPGS_C01HBa0163B20.1-_SGN-E547511+ (76959 76576) ******************************************************************************** EST sequence 232 +strand 731 n (File: SGN-E374054+) 1 TTTTTTTTTA GGAAATATAA TTTTGAATAA TTAGAAAAAA TTACAGGGTG AATGGTATAT 61 GCAATTACAC CTTCATCATG CCAGCTTCAT AGGGAATATC AAACACTGGT AACCATGGCT 121 GTTGTGTATT AATGAATTTA CCGGCAGTGA AGCTGTTAAT AACGTCTCCT GAAATATCCT 181 TTTGGTAACC TCTCCATGTG GAGACTCTTT TGTCAAGTGC AGCACCTGGT CCTCTGTTCT 241 GATACTCTGC ATAAAAACAT GTGTGTATTC CAAAATCAGT TGTGTTCCAT GGTGACCATC 301 CTGATGGATC GACGAATCCA TCGATGTTTG ATTGCATTAT GATGGTCTTG GAAAACTCCT 361 TCCATGGACG TCCAAGATAG ACTTTGACTG GTGGATTGGC GCTAGTGAGT GCTGGATCAG 421 CCTTGATGTC ACAATTCTGG ATAACGAATG TACCAAAGGA ATCTTTTCTC ATCCTTCCTT 481 GAGCAGTGAT CATGCAAGCT TGATTAGGAC CTGGTTTCCT CACAATCAAT TTGCAGTTTT 541 GGAAAACAGC ACTTGCATCA CCAAACAAGA AATCAATGGT GCCTGTAATG GTACAATCAC 601 GATAAAATTG TCTTCCTGAG TGAGCGTATA ACGTGTCTTG GTAACCATCG ATATTGCAGT 661 TGTAGAGAAC AGCCCTATCG GCATTAATTC TCAATGCAAC GGCTTGTTCT TTTGTGGGTC 721 CTGCTGTGTT T Predicted gene structure (within gDNA segment 79214 to 72478): Exon 1 76959 76576 ( 384 n); cDNA 63 455 ( 393 n); score: 0.793 Intron 1 76575 74694 (1882 n); Pd: 0.990 (s: 0.72), Pa: 0.892 (s: 0) Exon 2 74693 74688 ( 6 n); cDNA 456 461 ( 6 n); score: 0.833 MATCH C01HBa0163B20.1- SGN-E374054+ 0.793 390 0.534 C PGS_C01HBa0163B20.1-_SGN-E374054+ (76959 76576,74693 74688) Alignment (genomic DNA sequence = upper lines): AATTAGACCT TCATAATGCC AGGCTCAAAG GGAATATCAC TCTTGGGTAG CCAAGGGTCT 76900 ||||| |||| |||| ||||| || ||| || ||||||||| | |||| ||| || | | AATTACACCT TCATCATGCC AGCTTCATAG GGAATATCAA ACACTGGTAA CCATGGCTGT 122 CTTGTGTTGA TGAAATTGCC GTCAATGAAT TGGTTAATAG TGTCTCCTGA AATTCCCTTT 76840 ||| || | |||| || || | || |||| ||||||| ||||||||| ||| ||||| TGTGTATTAA TGAATTTACC GGCAGTGAAG CTGTTAATAA CGTCTCCTGA AATATCCTTT 182 TGGTAACCTC TCCATGTTGA GATTTTTTTG TCAAGTGCAG CACCTGGTTC TCTGTTCTGA 76780 |||||||||| ||||||| || || | ||||| |||||||||| |||||||| | |||||||||| TGGTAACCTC TCCATGTGGA GACTCTTTTG TCAAGTGCAG CACCTGGTCC TCTGTTCTGA 242 TACTCTGCAT -AAAACATGT GTGTTTTCCA AAATTAGTTG TGTTCCATGG TGACCATCCT 76721 |||||||||| ||||||||| |||| ||||| |||| ||||| |||||||||| |||||||||| TACTCTGCAT AAAAACATGT GTGTATTCCA AAATCAGTTG TGTTCCATGG TGACCATCCT 302 GATGGATCGA TGAATGCATC AATGTTTGAT TGCATTATGA TGGTCTTGGA ATACTCCTTC 76661 |||||||||| |||| |||| ||||||||| |||||||||| |||||||||| | |||||||| GATGGATCGA CGAATCCATC GATGTTTGAT TGCATTATGA TGGTCTTGGA AAACTCCTTC 362 CATGGACGTC CAATATAGGC -TT---T--T --AATGGTGC TAGGGAACCC TGCCTGAGGC 76609 |||||||||| ||| |||| | || | | | ||| || ||| || | || | || | CATGGACGTC CAAGATAGAC TTTGACTGGT GGATTGGCGC TAGTGAGTGC TGGATCAGCC 422 TTGATGTCAC AATTCTGGAT AACTAATCCA GAGGTACTAT CTTGTTTATG TTAAGTAGTG 76549 |||||||||| |||||||||| ||| ||| | TTGATGTCAC AATTCTGGAT AACGAATGTA CCA....... .......... .......... 455 GAGCCTGATT AATATATATA ACTCTTTACG CAATTTCCGC GGTGAGGTTA CCGGGGGTTA 76489 .......... .......... .......... .......... .......... .......... 455 TGGGGGTGGG AGCCCCCCAT CCGAAGGAGG GGTTCAGGGC AGCGACCCGA CCTAAATTTT 76429 .......... .......... .......... .......... .......... .......... 455 AGGCTTTCCT ATTTATTCTC TATTTATTCT CTGTAACCAA AAAAACTCTG ATTTATTAAT 76369 .......... .......... .......... .......... .......... .......... 455 ATAAATATAC CTCACGACCG TGGAAGTTTA CTCACGGGGT GTTACCACAA AATATTGGGT 76309 .......... .......... .......... .......... .......... .......... 455 TTTCTCTTTC TAGATCTCTC ATCTCTTTCT TTTAAAAGTT CTTGTGTTTT CATTCATCTA 76249 .......... .......... .......... .......... .......... .......... 455 GTGTGTGTGC TTTAATTCGA TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA 76189 .......... .......... .......... .......... .......... .......... 455 TCACTGAAGA TGGATAGTTT GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT 76129 .......... .......... .......... .......... .......... .......... 455 TTCTGGAAGA TGCAGATCAA AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC 76069 .......... .......... .......... .......... .......... .......... 455 AGGGTGAAAC CGGAATCCAT GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA 76009 .......... .......... .......... .......... .......... .......... 455 GGGTTGATCC GGTTGACTTT GTCAAGAAAC GTGGCGTTCA ACATTGTGAA GACGTTCGGT 75949 .......... .......... .......... .......... .......... .......... 455 CTGTTGAAGG AACTGTCAAA CATGTATGAA AAACCATCGG CTATGAACAA GGTATATTTG 75889 .......... .......... .......... .......... .......... .......... 455 ATGCGTAGAT TGTTCAATTT ACAGATGTAT GAGAATGGAT CTGTTTCTGA TCATATAAAC 75829 .......... .......... .......... .......... .......... .......... 455 GAGTTTAATA TGATTGTGAG TCAACTCAAT TCTGTGGATA TCAATTTCGA AGATGAAATT 75769 .......... .......... .......... .......... .......... .......... 455 AAGGCGTTGA TTTTGTTGTC ATCTCTGCCC GAGTCTTGGG ATACTATTGT TGCTGCGATT 75709 .......... .......... .......... .......... .......... .......... 455 CGCAGTTCCC GTGGATCTGA GAAACTGAAG TTTGATAAAA TCCATGATGT TGTTCTTAGC 75649 .......... .......... .......... .......... .......... .......... 455 GAAAGTATTC ACAAATGAGA AGTGGGAAAT TCATTGGGCA GTGCTCTCAG CGTTGATCGA 75589 .......... .......... .......... .......... .......... .......... 455 AGGGGGAGAA GTAAGACGAA AGGCCAAAAT CAACATGGTC GATCAAAATC AAAGAATCGA 75529 .......... .......... .......... .......... .......... .......... 455 GAAAAATCCC TGAAGATCAA ACGTGACTTG TTGGAACTGT AAAGAAAAAG GGCACTTTTA 75469 .......... .......... .......... .......... .......... .......... 455 GACGAACTAT ACAAAGCAAA AGAAGAAACA AAATCACAAA ATTTGGAGAT GACAATGATT 75409 .......... .......... .......... .......... .......... .......... 455 CTGTAAATTC ATCAGAGGAC ATTGGGGATG CTCTAATCCT TAGTGTGAAT AGCCCGGTTG 75349 .......... .......... .......... .......... .......... .......... 455 AATCATGGAT TTTGGATTCT GGTGCATCTT TCCATTCATC TTCAAGCAAG GAGTTGTTCC 75289 .......... .......... .......... .......... .......... .......... 455 AAAATTTCAA ATCTGGAAAT TTTGGAAAAG TATATCTTGT TGACAATAAA GCCTTAGAGA 75229 .......... .......... .......... .......... .......... .......... 455 TTGAAGGAAA GGGGGATGTT TGCATAAAGA CCACCTCGGG AAACCAATGG ACATTGGAGG 75169 .......... .......... .......... .......... .......... .......... 455 ATGTCAGATA TATTCCTGGG ATCAACAAAA AATTGATCTC TGTCGGTCAG TTGGATAGCA 75109 .......... .......... .......... .......... .......... .......... 455 CGGGATATGC AGCAGAGTTA GGGAAATGTT CGTGGAAGAT CATGAAAGTT GCTATGGTAG 75049 .......... .......... .......... .......... .......... .......... 455 TAGCTCGTGG CACCAAATCT GGAACCTTGT ACACCACTGC AGAGTGTATA AACTAGGTCG 74989 .......... .......... .......... .......... .......... .......... 455 CTGTTGCTGA AGGTGTTTCC GGTTCATGTC TGTGGCACAA CAGACTTGGA CACATGAGTA 74929 .......... .......... .......... .......... .......... .......... 455 CTAAAGGAAT GAAGATGTTG GTTGCAAAAG GAGAATTAGA GGGTCTGAAG TCTGTTGATA 74869 .......... .......... .......... .......... .......... .......... 455 TGGGTCTTTG CGAGAGCTGT GTTATGGGAA AACAGAAAAG AGTAAGCTTC ACAAGGACTC 74809 .......... .......... .......... .......... .......... .......... 455 CTAGAGAGCC AAAGAAAGTG CGGTTGGAAA TGGTCCATAT AGATGTTTGG GGACCATATC 74749 .......... .......... .......... .......... .......... .......... 455 CAGTATCATT ACTTGGAGGA TCCAGATTCT ATGTTACCTT CATTGATGAT TTCAGCAGGA 74689 |||| .......... .......... .......... .......... .......... .....AAGGA 460 A 74688 | A 461 hqPGS_C01HBa0163B20.1-_SGN-E374054+ (76959 76576) ******************************************************************************** EST sequence 235 +strand 649 n (File: SGN-E374063+) 1 TTTTTTTTTT ATACAAAGGA AATAGGAAAT ATAATTTTGA ATAATTAGAA AAAATTACAG 61 GGTGAATGGT ATATGCAATT ACACCTTCAT CATGCCAGCT TCATAGGGAA TATCAAACAC 121 TGGTAACCAT GGCTGTTGTG TATTAATGAA TTTACCGGCA GTGAAGCTGT TAATAACGTC 181 TCCTGAAATA TCCTTTTGGT AACCTCTCCA TGTGGAGACT CTTTTGTCAA GTGCAGCACC 241 TGGTCCTCTG TTCTGATACT CTGCATAAAA ACATGTGTGT ATTCCAAAAT CAGTTGTGTT 301 CCATGGTGAC CATCCTGATG GATCGACGAA TCCATCGATG TTTGATTGCA TTATGATGGT 361 CTTGGAAAAC TCCTTTCATG GACGTCCAAG ATAGACTTTG ACTGGTGGAT TGGCGCTAGT 421 GAGTGCTGGA TCAGCCTTGA TGTCACAATT CTGGATAACG AATGTACCAA AGGAATCTTT 481 TCTCATCCTT CCTTGAGCAG TGATCATGCA AGCTTGATTA GGACCTGGTT TCCTCACAAT 541 CAATTTGCAG TTTTGGAAAA CAGCACTTGC ATCACCAAAC AAGAAATCAA TGGTGCCTGT 601 AATGGTACAA TCACGATAAA ATTGTCTTCC TGAGTGAGCG TATAACGTG Predicted gene structure (within gDNA segment 79354 to 73240): Exon 1 76959 76576 ( 384 n); cDNA 77 469 ( 393 n); score: 0.790 Intron 1 76575 74694 (1882 n); Pd: 0.990 (s: 0.72), Pa: 0.892 (s: 0) Exon 2 74693 74688 ( 6 n); cDNA 470 475 ( 6 n); score: 0.833 PPA cDNA 12 1 MATCH C01HBa0163B20.1- SGN-E374063+ 0.790 390 0.601 C PGS_C01HBa0163B20.1-_SGN-E374063+ (76959 76576,74693 74688) Alignment (genomic DNA sequence = upper lines): AATTAGACCT TCATAATGCC AGGCTCAAAG GGAATATCAC TCTTGGGTAG CCAAGGGTCT 76900 ||||| |||| |||| ||||| || ||| || ||||||||| | |||| ||| || | | AATTACACCT TCATCATGCC AGCTTCATAG GGAATATCAA ACACTGGTAA CCATGGCTGT 136 CTTGTGTTGA TGAAATTGCC GTCAATGAAT TGGTTAATAG TGTCTCCTGA AATTCCCTTT 76840 ||| || | |||| || || | || |||| ||||||| ||||||||| ||| ||||| TGTGTATTAA TGAATTTACC GGCAGTGAAG CTGTTAATAA CGTCTCCTGA AATATCCTTT 196 TGGTAACCTC TCCATGTTGA GATTTTTTTG TCAAGTGCAG CACCTGGTTC TCTGTTCTGA 76780 |||||||||| ||||||| || || | ||||| |||||||||| |||||||| | |||||||||| TGGTAACCTC TCCATGTGGA GACTCTTTTG TCAAGTGCAG CACCTGGTCC TCTGTTCTGA 256 TACTCTGCAT -AAAACATGT GTGTTTTCCA AAATTAGTTG TGTTCCATGG TGACCATCCT 76721 |||||||||| ||||||||| |||| ||||| |||| ||||| |||||||||| |||||||||| TACTCTGCAT AAAAACATGT GTGTATTCCA AAATCAGTTG TGTTCCATGG TGACCATCCT 316 GATGGATCGA TGAATGCATC AATGTTTGAT TGCATTATGA TGGTCTTGGA ATACTCCTTC 76661 |||||||||| |||| |||| ||||||||| |||||||||| |||||||||| | ||||||| GATGGATCGA CGAATCCATC GATGTTTGAT TGCATTATGA TGGTCTTGGA AAACTCCTTT 376 CATGGACGTC CAATATAGGC -TT---T--T --AATGGTGC TAGGGAACCC TGCCTGAGGC 76609 |||||||||| ||| |||| | || | | | ||| || ||| || | || | || | CATGGACGTC CAAGATAGAC TTTGACTGGT GGATTGGCGC TAGTGAGTGC TGGATCAGCC 436 TTGATGTCAC AATTCTGGAT AACTAATCCA GAGGTACTAT CTTGTTTATG TTAAGTAGTG 76549 |||||||||| |||||||||| ||| ||| | TTGATGTCAC AATTCTGGAT AACGAATGTA CCA....... .......... .......... 469 GAGCCTGATT AATATATATA ACTCTTTACG CAATTTCCGC GGTGAGGTTA CCGGGGGTTA 76489 .......... .......... .......... .......... .......... .......... 469 TGGGGGTGGG AGCCCCCCAT CCGAAGGAGG GGTTCAGGGC AGCGACCCGA CCTAAATTTT 76429 .......... .......... .......... .......... .......... .......... 469 AGGCTTTCCT ATTTATTCTC TATTTATTCT CTGTAACCAA AAAAACTCTG ATTTATTAAT 76369 .......... .......... .......... .......... .......... .......... 469 ATAAATATAC CTCACGACCG TGGAAGTTTA CTCACGGGGT GTTACCACAA AATATTGGGT 76309 .......... .......... .......... .......... .......... .......... 469 TTTCTCTTTC TAGATCTCTC ATCTCTTTCT TTTAAAAGTT CTTGTGTTTT CATTCATCTA 76249 .......... .......... .......... .......... .......... .......... 469 GTGTGTGTGC TTTAATTCGA TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA 76189 .......... .......... .......... .......... .......... .......... 469 TCACTGAAGA TGGATAGTTT GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT 76129 .......... .......... .......... .......... .......... .......... 469 TTCTGGAAGA TGCAGATCAA AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC 76069 .......... .......... .......... .......... .......... .......... 469 AGGGTGAAAC CGGAATCCAT GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA 76009 .......... .......... .......... .......... .......... .......... 469 GGGTTGATCC GGTTGACTTT GTCAAGAAAC GTGGCGTTCA ACATTGTGAA GACGTTCGGT 75949 .......... .......... .......... .......... .......... .......... 469 CTGTTGAAGG AACTGTCAAA CATGTATGAA AAACCATCGG CTATGAACAA GGTATATTTG 75889 .......... .......... .......... .......... .......... .......... 469 ATGCGTAGAT TGTTCAATTT ACAGATGTAT GAGAATGGAT CTGTTTCTGA TCATATAAAC 75829 .......... .......... .......... .......... .......... .......... 469 GAGTTTAATA TGATTGTGAG TCAACTCAAT TCTGTGGATA TCAATTTCGA AGATGAAATT 75769 .......... .......... .......... .......... .......... .......... 469 AAGGCGTTGA TTTTGTTGTC ATCTCTGCCC GAGTCTTGGG ATACTATTGT TGCTGCGATT 75709 .......... .......... .......... .......... .......... .......... 469 CGCAGTTCCC GTGGATCTGA GAAACTGAAG TTTGATAAAA TCCATGATGT TGTTCTTAGC 75649 .......... .......... .......... .......... .......... .......... 469 GAAAGTATTC ACAAATGAGA AGTGGGAAAT TCATTGGGCA GTGCTCTCAG CGTTGATCGA 75589 .......... .......... .......... .......... .......... .......... 469 AGGGGGAGAA GTAAGACGAA AGGCCAAAAT CAACATGGTC GATCAAAATC AAAGAATCGA 75529 .......... .......... .......... .......... .......... .......... 469 GAAAAATCCC TGAAGATCAA ACGTGACTTG TTGGAACTGT AAAGAAAAAG GGCACTTTTA 75469 .......... .......... .......... .......... .......... .......... 469 GACGAACTAT ACAAAGCAAA AGAAGAAACA AAATCACAAA ATTTGGAGAT GACAATGATT 75409 .......... .......... .......... .......... .......... .......... 469 CTGTAAATTC ATCAGAGGAC ATTGGGGATG CTCTAATCCT TAGTGTGAAT AGCCCGGTTG 75349 .......... .......... .......... .......... .......... .......... 469 AATCATGGAT TTTGGATTCT GGTGCATCTT TCCATTCATC TTCAAGCAAG GAGTTGTTCC 75289 .......... .......... .......... .......... .......... .......... 469 AAAATTTCAA ATCTGGAAAT TTTGGAAAAG TATATCTTGT TGACAATAAA GCCTTAGAGA 75229 .......... .......... .......... .......... .......... .......... 469 TTGAAGGAAA GGGGGATGTT TGCATAAAGA CCACCTCGGG AAACCAATGG ACATTGGAGG 75169 .......... .......... .......... .......... .......... .......... 469 ATGTCAGATA TATTCCTGGG ATCAACAAAA AATTGATCTC TGTCGGTCAG TTGGATAGCA 75109 .......... .......... .......... .......... .......... .......... 469 CGGGATATGC AGCAGAGTTA GGGAAATGTT CGTGGAAGAT CATGAAAGTT GCTATGGTAG 75049 .......... .......... .......... .......... .......... .......... 469 TAGCTCGTGG CACCAAATCT GGAACCTTGT ACACCACTGC AGAGTGTATA AACTAGGTCG 74989 .......... .......... .......... .......... .......... .......... 469 CTGTTGCTGA AGGTGTTTCC GGTTCATGTC TGTGGCACAA CAGACTTGGA CACATGAGTA 74929 .......... .......... .......... .......... .......... .......... 469 CTAAAGGAAT GAAGATGTTG GTTGCAAAAG GAGAATTAGA GGGTCTGAAG TCTGTTGATA 74869 .......... .......... .......... .......... .......... .......... 469 TGGGTCTTTG CGAGAGCTGT GTTATGGGAA AACAGAAAAG AGTAAGCTTC ACAAGGACTC 74809 .......... .......... .......... .......... .......... .......... 469 CTAGAGAGCC AAAGAAAGTG CGGTTGGAAA TGGTCCATAT AGATGTTTGG GGACCATATC 74749 .......... .......... .......... .......... .......... .......... 469 CAGTATCATT ACTTGGAGGA TCCAGATTCT ATGTTACCTT CATTGATGAT TTCAGCAGGA 74689 |||| .......... .......... .......... .......... .......... .....AAGGA 474 A 74688 | A 475 hqPGS_C01HBa0163B20.1-_SGN-E374063+ (76959 76576) ******************************************************************************** EST sequence 283 +strand 702 n (File: SGN-E549438+) 1 TTTTTTTTTT TAGGAAATAT AATTTTGAAT AATTAGAAAA AATTACAGGG GTGAATGGTA 61 TATGCAATTA CACCTTCATC ATGCCAGCTT CATAGGGAAT ATCAAACACT GGTAACCATG 121 GCTGTTGTGT ATTAATGAAT TTACCGGCAG TGAAGCTGTT AATAACGTCT CCTGAAATAT 181 CCTTTTGGTA ACCTCTCCAT GTGGAGACTC TTTTGTCAAG TGCAGCACCT GGTCCTCTGT 241 TCTGATACTC TGCATAAAAA CATGTGTGTA TTCCAAAATC AGTTGTGTTC CATGGTGACC 301 ATCCTGATGG ATCGACGAAT CCATCGATGT TTGATTGCAT TATGATGGTC TTGGAAAACT 361 CCTTCCATGG ACGTCCAAGA TAGACTTTGA CTGGTGGATT GGCGCTAGTG AGTGCTGGAT 421 CAGCCTTGAT GTCACAATTC TGGATAACGA ATGTACCAAA GGAATCTTTT CTCATCCTTC 481 CTTGAGCAGT GATCATGCAA GCTTGATTAG GACCTGGTTT CCTCACAATC AATTTGCAGT 541 TTTGGAAAAC AGCACTTGCA TCACCAAACA AGAAATCAAT GGTGCCTGTA ATGGTACAAT 601 CACGATAAAA TTGTCTTCCT GAGTGAGCGT ATAACGTGTC TTGGTAACCA TCGATATTGC 661 AGTTGTAGAG AACAGCCCTA TCGGCATTAA TTCTCAATGC AA Predicted gene structure (within gDNA segment 79244 to 72798): Exon 1 76959 76576 ( 384 n); cDNA 66 458 ( 393 n); score: 0.793 Intron 1 76575 74694 (1882 n); Pd: 0.990 (s: 0.72), Pa: 0.892 (s: 0) Exon 2 74693 74688 ( 6 n); cDNA 459 464 ( 6 n); score: 0.833 PPA cDNA 11 1 MATCH C01HBa0163B20.1- SGN-E549438+ 0.793 390 0.556 C PGS_C01HBa0163B20.1-_SGN-E549438+ (76959 76576,74693 74688) Alignment (genomic DNA sequence = upper lines): AATTAGACCT TCATAATGCC AGGCTCAAAG GGAATATCAC TCTTGGGTAG CCAAGGGTCT 76900 ||||| |||| |||| ||||| || ||| || ||||||||| | |||| ||| || | | AATTACACCT TCATCATGCC AGCTTCATAG GGAATATCAA ACACTGGTAA CCATGGCTGT 125 CTTGTGTTGA TGAAATTGCC GTCAATGAAT TGGTTAATAG TGTCTCCTGA AATTCCCTTT 76840 ||| || | |||| || || | || |||| ||||||| ||||||||| ||| ||||| TGTGTATTAA TGAATTTACC GGCAGTGAAG CTGTTAATAA CGTCTCCTGA AATATCCTTT 185 TGGTAACCTC TCCATGTTGA GATTTTTTTG TCAAGTGCAG CACCTGGTTC TCTGTTCTGA 76780 |||||||||| ||||||| || || | ||||| |||||||||| |||||||| | |||||||||| TGGTAACCTC TCCATGTGGA GACTCTTTTG TCAAGTGCAG CACCTGGTCC TCTGTTCTGA 245 TACTCTGCAT -AAAACATGT GTGTTTTCCA AAATTAGTTG TGTTCCATGG TGACCATCCT 76721 |||||||||| ||||||||| |||| ||||| |||| ||||| |||||||||| |||||||||| TACTCTGCAT AAAAACATGT GTGTATTCCA AAATCAGTTG TGTTCCATGG TGACCATCCT 305 GATGGATCGA TGAATGCATC AATGTTTGAT TGCATTATGA TGGTCTTGGA ATACTCCTTC 76661 |||||||||| |||| |||| ||||||||| |||||||||| |||||||||| | |||||||| GATGGATCGA CGAATCCATC GATGTTTGAT TGCATTATGA TGGTCTTGGA AAACTCCTTC 365 CATGGACGTC CAATATAGGC -TT---T--T --AATGGTGC TAGGGAACCC TGCCTGAGGC 76609 |||||||||| ||| |||| | || | | | ||| || ||| || | || | || | CATGGACGTC CAAGATAGAC TTTGACTGGT GGATTGGCGC TAGTGAGTGC TGGATCAGCC 425 TTGATGTCAC AATTCTGGAT AACTAATCCA GAGGTACTAT CTTGTTTATG TTAAGTAGTG 76549 |||||||||| |||||||||| ||| ||| | TTGATGTCAC AATTCTGGAT AACGAATGTA CCA....... .......... .......... 458 GAGCCTGATT AATATATATA ACTCTTTACG CAATTTCCGC GGTGAGGTTA CCGGGGGTTA 76489 .......... .......... .......... .......... .......... .......... 458 TGGGGGTGGG AGCCCCCCAT CCGAAGGAGG GGTTCAGGGC AGCGACCCGA CCTAAATTTT 76429 .......... .......... .......... .......... .......... .......... 458 AGGCTTTCCT ATTTATTCTC TATTTATTCT CTGTAACCAA AAAAACTCTG ATTTATTAAT 76369 .......... .......... .......... .......... .......... .......... 458 ATAAATATAC CTCACGACCG TGGAAGTTTA CTCACGGGGT GTTACCACAA AATATTGGGT 76309 .......... .......... .......... .......... .......... .......... 458 TTTCTCTTTC TAGATCTCTC ATCTCTTTCT TTTAAAAGTT CTTGTGTTTT CATTCATCTA 76249 .......... .......... .......... .......... .......... .......... 458 GTGTGTGTGC TTTAATTCGA TCCTAACAAC TGGCATCAGA GATAAGGAGA TACAACACGA 76189 .......... .......... .......... .......... .......... .......... 458 TCACTGAAGA TGGATAGTTT GAAGCTTGGA ATCGAGAAGT TTGATGGATC CGATTTTAGT 76129 .......... .......... .......... .......... .......... .......... 458 TTCTGGAAGA TGCAGATCAA AGATTATCTG TACCAGAAAG ATCTTCATAA ACCGTTGACC 76069 .......... .......... .......... .......... .......... .......... 458 AGGGTGAAAC CGGAATCCAT GACGGAGGAG AAGTGGAAAC TCAAGGATCG CCAGGCTCTA 76009 .......... .......... .......... .......... .......... .......... 458 GGGTTGATCC GGTTGACTTT GTCAAGAAAC GTGGCGTTCA ACATTGTGAA GACGTTCGGT 75949 .......... .......... .......... .......... .......... .......... 458 CTGTTGAAGG AACTGTCAAA CATGTATGAA AAACCATCGG CTATGAACAA GGTATATTTG 75889 .......... .......... .......... .......... .......... .......... 458 ATGCGTAGAT TGTTCAATTT ACAGATGTAT GAGAATGGAT CTGTTTCTGA TCATATAAAC 75829 .......... .......... .......... .......... .......... .......... 458 GAGTTTAATA TGATTGTGAG TCAACTCAAT TCTGTGGATA TCAATTTCGA AGATGAAATT 75769 .......... .......... .......... .......... .......... .......... 458 AAGGCGTTGA TTTTGTTGTC ATCTCTGCCC GAGTCTTGGG ATACTATTGT TGCTGCGATT 75709 .......... .......... .......... .......... .......... .......... 458 CGCAGTTCCC GTGGATCTGA GAAACTGAAG TTTGATAAAA TCCATGATGT TGTTCTTAGC 75649 .......... .......... .......... .......... .......... .......... 458 GAAAGTATTC ACAAATGAGA AGTGGGAAAT TCATTGGGCA GTGCTCTCAG CGTTGATCGA 75589 .......... .......... .......... .......... .......... .......... 458 AGGGGGAGAA GTAAGACGAA AGGCCAAAAT CAACATGGTC GATCAAAATC AAAGAATCGA 75529 .......... .......... .......... .......... .......... .......... 458 GAAAAATCCC TGAAGATCAA ACGTGACTTG TTGGAACTGT AAAGAAAAAG GGCACTTTTA 75469 .......... .......... .......... .......... .......... .......... 458 GACGAACTAT ACAAAGCAAA AGAAGAAACA AAATCACAAA ATTTGGAGAT GACAATGATT 75409 .......... .......... .......... .......... .......... .......... 458 CTGTAAATTC ATCAGAGGAC ATTGGGGATG CTCTAATCCT TAGTGTGAAT AGCCCGGTTG 75349 .......... .......... .......... .......... .......... .......... 458 AATCATGGAT TTTGGATTCT GGTGCATCTT TCCATTCATC TTCAAGCAAG GAGTTGTTCC 75289 .......... .......... .......... .......... .......... .......... 458 AAAATTTCAA ATCTGGAAAT TTTGGAAAAG TATATCTTGT TGACAATAAA GCCTTAGAGA 75229 .......... .......... .......... .......... .......... .......... 458 TTGAAGGAAA GGGGGATGTT TGCATAAAGA CCACCTCGGG AAACCAATGG ACATTGGAGG 75169 .......... .......... .......... .......... .......... .......... 458 ATGTCAGATA TATTCCTGGG ATCAACAAAA AATTGATCTC TGTCGGTCAG TTGGATAGCA 75109 .......... .......... .......... .......... .......... .......... 458 CGGGATATGC AGCAGAGTTA GGGAAATGTT CGTGGAAGAT CATGAAAGTT GCTATGGTAG 75049 .......... .......... .......... .......... .......... .......... 458 TAGCTCGTGG CACCAAATCT GGAACCTTGT ACACCACTGC AGAGTGTATA AACTAGGTCG 74989 .......... .......... .......... .......... .......... .......... 458 CTGTTGCTGA AGGTGTTTCC GGTTCATGTC TGTGGCACAA CAGACTTGGA CACATGAGTA 74929 .......... .......... .......... .......... .......... .......... 458 CTAAAGGAAT GAAGATGTTG GTTGCAAAAG GAGAATTAGA GGGTCTGAAG TCTGTTGATA 74869 .......... .......... .......... .......... .......... .......... 458 TGGGTCTTTG CGAGAGCTGT GTTATGGGAA AACAGAAAAG AGTAAGCTTC ACAAGGACTC 74809 .......... .......... .......... .......... .......... .......... 458 CTAGAGAGCC AAAGAAAGTG CGGTTGGAAA TGGTCCATAT AGATGTTTGG GGACCATATC 74749 .......... .......... .......... .......... .......... .......... 458 CAGTATCATT ACTTGGAGGA TCCAGATTCT ATGTTACCTT CATTGATGAT TTCAGCAGGA 74689 |||| .......... .......... .......... .......... .......... .....AAGGA 463 A 74688 | A 464 hqPGS_C01HBa0163B20.1-_SGN-E549438+ (76959 76576) ******************************************************************************** EST sequence 244 +strand 442 n (File: SGN-E226674+) 1 GTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTAGGAA ATATAATTTT GAATAATTAG 61 AAAAAATTAC AGGATGAATG GTATATGTAA TTACACCTTC ATCATGCCAG CTTCATAGGG 121 AATATCAAAC ATTGGTAACC ATGGCTGTTG TGTATTAATG AATTTACCGG CAGTGAAGCT 181 GTTAATAACG TCTCCTGAAA TATCCTTTTG GTAACCTCTC CATGTGGAGA CTCTTTTGTC 241 AAGTGCAGCA CCTGGTCCTC TGTTCTGATA CTCTGCATAA AAACATGTGT GTATTCCAAA 301 ATCAGTTGTG TTCCATGGTG ACCATCCTGA TGGATCGACG AATCCATCGA TGTTTGATTG 361 CATTATGATG GTCTTGGAAA ACTCCTTCCA TGGACGTCCA AGATAGACTT TGACTGGTGG 421 ATTGGCGCTA GTGAGTGCTT TA Predicted gene structure (within gDNA segment 79474 to 75628): Exon 1 77281 77276 ( 6 n); cDNA 81 86 ( 6 n); score: 1.000 Intron 1 77275 76963 ( 313 n); Pd: 0.000 (s: 0), Pa: 0.939 (s: 0.80) Exon 2 76962 76631 ( 332 n); cDNA 87 418 ( 332 n); score: 0.863 PPA cDNA 35 1 MATCH C01HBa0163B20.1- SGN-E226674+ 0.863 338 0.765 C PGS_C01HBa0163B20.1-_SGN-E226674+ (77281 77276,76962 76631) Alignment (genomic DNA sequence = upper lines): GTATATATAT GCATCTGCAC AATGATGTCA AACATACAGA AAAGAGAATT TTCTCCCAAT 77222 |||||| GTATAT.... .......... .......... .......... .......... .......... 86 CAATTTCTTG CTACCTTTTT TTTCAGTAAC TTGGCCTGAT CTTAATACTT TTACTGTTTT 77162 .......... .......... .......... .......... .......... .......... 86 TTTAAATTTC ATTTCGTACA ATGTTGATTT GATACAAAGA AAAATGGTTG TATTTCATGT 77102 .......... .......... .......... .......... .......... .......... 86 GGAGTCATAT ATAGGTGGAT AGAAAAAACA TATTATTATC ATCTTAATAT TGTGTGAATA 77042 .......... .......... .......... .......... .......... .......... 86 TAAGATGTCT AAAGAAAGGA GCAAAAATAT ATTAATTATC TAAAACAAAA TAGTCCTTGT 76982 .......... .......... .......... .......... .......... .......... 86 ATGGAAATAA ATGATATAGG TTAATTAGAC CTTCATAATG CCAGGCTCAA AGGGAATATC 76922 | |||||| || |||||| ||| |||| ||| |||||||||| .......... .........G -TAATTACAC CTTCATCATG CCAGCTTCAT AGGGAATATC 126 ACTCTTGGGT AGCCAAGGGT CTCTTGTGTT GATGAAATTG CCGTCAATGA ATTGGTTAAT 76862 | | | ||| | ||| || | | ||| || ||||| || ||| || ||| | |||||| AAACATTGGT AACCATGGCT GTTGTGTATT AATGAATTTA CCGGCAGTGA AGCTGTTAAT 186 AGTGTCTCCT GAAATTCCCT TTTGGTAACC TCTCCATGTT GAGATTTTTT TGTCAAGTGC 76802 | ||||||| ||||| ||| |||||||||| ||||||||| |||| | ||| |||||||||| AACGTCTCCT GAAATATCCT TTTGGTAACC TCTCCATGTG GAGACTCTTT TGTCAAGTGC 246 AGCACCTGGT TCTCTGTTCT GATACTCTGC AT-AAAACAT GTGTGTTTTC CAAAATTAGT 76743 |||||||||| ||||||||| |||||||||| || ||||||| |||||| ||| |||||| ||| AGCACCTGGT CCTCTGTTCT GATACTCTGC ATAAAAACAT GTGTGTATTC CAAAATCAGT 306 TGTGTTCCAT GGTGACCATC CTGATGGATC GATGAATGCA TCAATGTTTG ATTGCATTAT 76683 |||||||||| |||||||||| |||||||||| || |||| || || ||||||| |||||||||| TGTGTTCCAT GGTGACCATC CTGATGGATC GACGAATCCA TCGATGTTTG ATTGCATTAT 366 GATGGTCTTG GAATACTCCT TCCATGGACG TCCAATATAG GCTTTTAATG GT 76631 |||||||||| ||| |||||| |||||||||| ||||| |||| |||| | || || GATGGTCTTG GAAAACTCCT TCCATGGACG TCCAAGATAG ACTTTGACTG GT 418 hqPGS_C01HBa0163B20.1-_SGN-E226674+ (76962 76631) ******************************************************************************** EST sequence 241 +strand 471 n (File: SGN-E226303+) 1 TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTAGGAAAT ATAATTTTGA ATAATTAGAA 61 AAAATTACAG GATGAATGGT ATATGTAATT ACACCTTCAT CATGCCAGCT TCATAGGGAA 121 TATCAAACAT TGGTAACCAT GGCTGTTGTG TATTAATGAA TTTACCGGCA GGGAAGCTGT 181 TAATAACGTC TCCTGAAATA TCCTTTTGGT AACCTCTCCA TGTGGAGACT CTTTTGTCAA 241 GTGCAGCACC TGGTCCTCTG TTCTGATACT CTGCATAAAA ACATGTGTGT ATTCCAAAAT 301 CAGTTGGGTT CCATGGGGAC CATCCTGATG GATCGACGAA TCCATCGATG TTTGATTGCA 361 TTATGATGGT CTTGGAAAAC TCCTTCCATG GACGTCCAAG ATAGACTTTG ACTGGTGGAT 421 TGGCGCTAGT GAGTGCTTTA TCAGCCTTGA TGTCACAATT CTGGATAACG A Predicted gene structure (within gDNA segment 79454 to 75318): Exon 1 76960 76631 ( 330 n); cDNA 86 416 ( 331 n); score: 0.856 PPA cDNA 33 1 MATCH C01HBa0163B20.1- SGN-E226303+ 0.856 330 0.701 C PGS_C01HBa0163B20.1-_SGN-E226303+ (76960 76631) Alignment (genomic DNA sequence = upper lines): TAATTAGACC TTCATAATGC CAGGCTCAAA GGGAATATCA CTCTTGGGTA GCCAAGGGTC 76901 |||||| ||| ||||| |||| ||| ||| | |||||||||| | | |||| ||| || | TAATTACACC TTCATCATGC CAGCTTCATA GGGAATATCA AACATTGGTA ACCATGGCTG 145 TCTTGTGTTG ATGAAATTGC CGTCAATGAA TTGGTTAATA GTGTCTCCTG AAATTCCCTT 76841 | ||| || ||||| || | || || ||| ||||||| |||||||| |||| |||| TTGTGTATTA ATGAATTTAC CGGCAGGGAA GCTGTTAATA ACGTCTCCTG AAATATCCTT 205 TTGGTAACCT CTCCATGTTG AGATTTTTTT GTCAAGTGCA GCACCTGGTT CTCTGTTCTG 76781 |||||||||| |||||||| | ||| | |||| |||||||||| ||||||||| |||||||||| TTGGTAACCT CTCCATGTGG AGACTCTTTT GTCAAGTGCA GCACCTGGTC CTCTGTTCTG 265 ATACTCTGCA T-AAAACATG TGTGTTTTCC AAAATTAGTT GTGTTCCATG GTGACCATCC 76722 |||||||||| | |||||||| ||||| |||| ||||| |||| | |||||||| | |||||||| ATACTCTGCA TAAAAACATG TGTGTATTCC AAAATCAGTT GGGTTCCATG GGGACCATCC 325 TGATGGATCG ATGAATGCAT CAATGTTTGA TTGCATTATG ATGGTCTTGG AATACTCCTT 76662 |||||||||| | |||| ||| | |||||||| |||||||||| |||||||||| || ||||||| TGATGGATCG ACGAATCCAT CGATGTTTGA TTGCATTATG ATGGTCTTGG AAAACTCCTT 385 CCATGGACGT CCAATATAGG CTTTTAATGG T 76631 |||||||||| |||| |||| |||| | ||| | CCATGGACGT CCAAGATAGA CTTTGACTGG T 416 hqPGS_C01HBa0163B20.1-_SGN-E226303+ (76960 76631) ******************************************************************************** EST sequence 278 +strand 399 n (File: SGN-E220264+) 1 TTTTTTTTTT TTTTTTTTAA ATAGGAAATA TAATTTTGAA TAATTAGAAA AAATTACAGG 61 ATGAATGGTA TATGTAATTA CACCTTCATC ATGCCAGCTT CATAGGGAAT ATCAAACATT 121 GGTAACCATG GCTGTTGTGT ATTAATGAAT TTACCGGCAG TGAAGCTGTT AATAACGTCT 181 CCTGAAATAT CCTTTTGGTA ACCTCTCCAT GTGGAGACTC TTTTGTCAAG TGCAGCACCT 241 GGTCCTCTGT TCTGATACTC TGCATAAAAA CATGTGTGTA TTCCAAAATC AGTTGTGTTC 301 CATGGTGACC ATCCTGATGG ATCGACGAAT CCATCGATGT TTGATTGCAT TATGATGGTC 361 TTGGAAAACT CCTTTCATGG ACGTCCAAGA TAGACTTTG Predicted gene structure (within gDNA segment 79344 to 75730): Exon 1 76960 76638 ( 323 n); cDNA 75 398 ( 324 n); score: 0.865 PPA cDNA 18 1 MATCH C01HBa0163B20.1- SGN-E220264+ 0.865 323 0.810 C PGS_C01HBa0163B20.1-_SGN-E220264+ (76960 76638) Alignment (genomic DNA sequence = upper lines): TAATTAGACC TTCATAATGC CAGGCTCAAA GGGAATATCA CTCTTGGGTA GCCAAGGGTC 76901 |||||| ||| ||||| |||| ||| ||| | |||||||||| | | |||| ||| || | TAATTACACC TTCATCATGC CAGCTTCATA GGGAATATCA AACATTGGTA ACCATGGCTG 134 TCTTGTGTTG ATGAAATTGC CGTCAATGAA TTGGTTAATA GTGTCTCCTG AAATTCCCTT 76841 | ||| || ||||| || | || || |||| ||||||| |||||||| |||| |||| TTGTGTATTA ATGAATTTAC CGGCAGTGAA GCTGTTAATA ACGTCTCCTG AAATATCCTT 194 TTGGTAACCT CTCCATGTTG AGATTTTTTT GTCAAGTGCA GCACCTGGTT CTCTGTTCTG 76781 |||||||||| |||||||| | ||| | |||| |||||||||| ||||||||| |||||||||| TTGGTAACCT CTCCATGTGG AGACTCTTTT GTCAAGTGCA GCACCTGGTC CTCTGTTCTG 254 ATACTCTGCA T-AAAACATG TGTGTTTTCC AAAATTAGTT GTGTTCCATG GTGACCATCC 76722 |||||||||| | |||||||| ||||| |||| ||||| |||| |||||||||| |||||||||| ATACTCTGCA TAAAAACATG TGTGTATTCC AAAATCAGTT GTGTTCCATG GTGACCATCC 314 TGATGGATCG ATGAATGCAT CAATGTTTGA TTGCATTATG ATGGTCTTGG AATACTCCTT 76662 |||||||||| | |||| ||| | |||||||| |||||||||| |||||||||| || ||||||| TGATGGATCG ACGAATCCAT CGATGTTTGA TTGCATTATG ATGGTCTTGG AAAACTCCTT 374 CCATGGACGT CCAATATAGG CTTT 76638 ||||||||| |||| |||| |||| TCATGGACGT CCAAGATAGA CTTT 398 hqPGS_C01HBa0163B20.1-_SGN-E220264+ (76960 76638) ******************************************************************************** EST sequence 223 +strand 352 n (File: SGN-E216887+) 1 TTTTTTTTTT TTTTTTTAGG AAATATTTTT TTGAATAATT AGAATAATTT ACAGGATGAA 61 TGGTATATGT AATTACACCT TCATCATGCC AGCTTCATTG GGAATATCAA ACATTGGTAA 121 CCATGGCTGT TGTGTATTAA TGAATTTACC GGCAGTGAAG CTGTTAATAA CGTCTCCTGA 181 AATATCCTTT TGGTAACCTC TCCATGTGGA GACTCTTTTG TCAAGTGCAG CACCTGGTCC 241 TCTGTTCTGA TACTCTGCAT AAAAACATGT GTGTATTCCA AAATCAGTTG TGTTCCATGG 301 TGACCATCCT GATGGATCAA CGAATCCATC GATGTTTGAT TGCATTATGA TG Predicted gene structure (within gDNA segment 79294 to 76069): Exon 1 76960 76679 ( 282 n); cDNA 70 352 ( 283 n); score: 0.853 PPA cDNA 17 1 MATCH C01HBa0163B20.1- SGN-E216887+ 0.853 282 0.801 C PGS_C01HBa0163B20.1-_SGN-E216887+ (76960 76679) Alignment (genomic DNA sequence = upper lines): TAATTAGACC TTCATAATGC CAGGCTCAAA GGGAATATCA CTCTTGGGTA GCCAAGGGTC 76901 |||||| ||| ||||| |||| ||| ||| |||||||||| | | |||| ||| || | TAATTACACC TTCATCATGC CAGCTTCATT GGGAATATCA AACATTGGTA ACCATGGCTG 129 TCTTGTGTTG ATGAAATTGC CGTCAATGAA TTGGTTAATA GTGTCTCCTG AAATTCCCTT 76841 | ||| || ||||| || | || || |||| ||||||| |||||||| |||| |||| TTGTGTATTA ATGAATTTAC CGGCAGTGAA GCTGTTAATA ACGTCTCCTG AAATATCCTT 189 TTGGTAACCT CTCCATGTTG AGATTTTTTT GTCAAGTGCA GCACCTGGTT CTCTGTTCTG 76781 |||||||||| |||||||| | ||| | |||| |||||||||| ||||||||| |||||||||| TTGGTAACCT CTCCATGTGG AGACTCTTTT GTCAAGTGCA GCACCTGGTC CTCTGTTCTG 249 ATACTCTGCA T-AAAACATG TGTGTTTTCC AAAATTAGTT GTGTTCCATG GTGACCATCC 76722 |||||||||| | |||||||| ||||| |||| ||||| |||| |||||||||| |||||||||| ATACTCTGCA TAAAAACATG TGTGTATTCC AAAATCAGTT GTGTTCCATG GTGACCATCC 309 TGATGGATCG ATGAATGCAT CAATGTTTGA TTGCATTATG ATG 76679 ||||||||| | |||| ||| | |||||||| |||||||||| ||| TGATGGATCA ACGAATCCAT CGATGTTTGA TTGCATTATG ATG 352 hqPGS_C01HBa0163B20.1-_SGN-E216887+ (76960 76679) ******************************************************************************** EST sequence 275 +strand 330 n (File: SGN-E220168+) 1 TTTTTTTTTT TTTTTTTTAA ATAGGAAATA TAATTTTGAA TAATTAGAAA AAATTACAGG 61 ATGAATGGTA TATGTAATTA CACCTTCATC ATGCCAGCTT CATAGGGAAT ATCAAACATT 121 GGTAACCATG GCTGTTGTGT ATTAATGAAT TTACCGGCAG TGAAGCTGTT AATAACGTTT 181 CCTGAAATAT CCTTTTGGTA ACCTCTCCAT GTGGAGACTC TTTTGTCAAG TGCAGCACCT 241 GGTCCTCTGT TCTGATACTC TGCATAAAAA CATGTGTGTA TTCCAAAATC AGTTTGTGTT 301 CCATGGTGAC CATCCTGATG GATCGACGAA Predicted gene structure (within gDNA segment 79344 to 76061): Exon 1 76960 76707 ( 254 n); cDNA 75 330 ( 256 n); score: 0.839 PPA cDNA 18 1 MATCH C01HBa0163B20.1- SGN-E220168+ 0.839 254 0.770 C PGS_C01HBa0163B20.1-_SGN-E220168+ (76960 76707) Alignment (genomic DNA sequence = upper lines): TAATTAGACC TTCATAATGC CAGGCTCAAA GGGAATATCA CTCTTGGGTA GCCAAGGGTC 76901 |||||| ||| ||||| |||| ||| ||| | |||||||||| | | |||| ||| || | TAATTACACC TTCATCATGC CAGCTTCATA GGGAATATCA AACATTGGTA ACCATGGCTG 134 TCTTGTGTTG ATGAAATTGC CGTCAATGAA TTGGTTAATA GTGTCTCCTG AAATTCCCTT 76841 | ||| || ||||| || | || || |||| ||||||| || ||||| |||| |||| TTGTGTATTA ATGAATTTAC CGGCAGTGAA GCTGTTAATA ACGTTTCCTG AAATATCCTT 194 TTGGTAACCT CTCCATGTTG AGATTTTTTT GTCAAGTGCA GCACCTGGTT CTCTGTTCTG 76781 |||||||||| |||||||| | ||| | |||| |||||||||| ||||||||| |||||||||| TTGGTAACCT CTCCATGTGG AGACTCTTTT GTCAAGTGCA GCACCTGGTC CTCTGTTCTG 254 ATACTCTGCA T-AAAACATG TGTGTTTTCC AAAATTAG-T TGTGTTCCAT GGTGACCATC 76723 |||||||||| | |||||||| ||||| |||| ||||| || | |||||||||| |||||||||| ATACTCTGCA TAAAAACATG TGTGTATTCC AAAATCAGTT TGTGTTCCAT GGTGACCATC 314 CTGATGGATC GATGAA 76707 |||||||||| || ||| CTGATGGATC GACGAA 330 hqPGS_C01HBa0163B20.1-_SGN-E220168+ (76960 76707) ******************************************************************************** EST sequence 25 -strand 715 n (File: SGN-E389503-) 1 CAAACTACAT CCTAGGTATA GTTTGTGTTT ACACTGGCCT ATGAATGAAA TGAAATGTAG 61 TACGTATGAA TGAAAGAAGC AGGCTATGTG TTTGCTAATG AAGACTCCCT AGTTGAGGTC 121 CCATTTGTTG AGCCCTCATT TCTGGGAATT CTTAATGTTA AGTCCATGAT TCAAAGGTCT 181 CATGGCATAT GATAAATGAT ATTAAAGAAG TGATGTGCTA CATGCAAATT GTATTTTATG 241 CCATATCATA TGTGCTATGT GTAAATGTTA TGTGCTATGT GGAAATGTTA AAAACTGATG 301 ATGTACGTTA TTCTCATGGC ATAACTTTCC TATTCTAAAT CTAGAAAGCT CACTGACTTT 361 CCTAATCCAT ATTTGGAAAC CTTCGTAATC ACAAATTGGC AGGTCCACTA ACTTGACTTC 421 CAAAAACCAT GTTGTTAGGA AAGAATTATT CTTTCTTATG CATGTCATTG GTGTGTGCTT 481 GCATATACCC ATACTTAGTA CAAGTGTGTA CTAACCCTAT ACAAACTCTA CTATTTTAGG 541 TGCAACCACA ACTGGACGAA TGAACTAAAG GATCTTCGCT GCAGTTATTC GGACGTTTAG 601 CATTCAACCG GCTTTGGTAG GTCCTCATGA TTTCGAGGAT GCTGTTGTTT TATATTCTAG 661 CTTAGTTTTA GAGTTGATGT AGTGGATCAT GTTCCACTAG TGTTTCCTTC CTATT Predicted gene structure (within gDNA segment 81637 to 74538): Exon 1 81017 80349 ( 669 n); cDNA 2 715 ( 714 n); score: 0.635 MATCH C01HBa0163B20.1- SGN-E389503- 0.635 669 0.936 C PGS_C01HBa0163B20.1-_SGN-E389503- (81017 80349) Alignment (genomic DNA sequence = upper lines): AAACTACATC CTAGGTATAG GTGGTGTCCA CACTGGCCTA TGAATGAAAT GAAATGAAGT 80958 |||||||||| |||||||||| | |||| | |||||||||| |||||||||| |||||| ||| AAACTACATC CTAGGTATAG TTTGTGTTTA CACTGGCCTA TGAATGAAAT GAAATGTAGT 61 ATGTATGAAT GGATGAAGCA GACTCTATGT TTTCTAATGA AGACTCCCTA GTTTAGGTCA 80898 | |||||||| | | |||||| | || | ||| || ||||||| |||||||||| ||| ||||| ACGTATGAAT GAAAGAAGCA GGCTATGTGT TTGCTAATGA AGACTCCCTA GTTGAGGTCC 121 CATATGTTGA GCCCTCATTT -TGAAACGTC TAAATACCAA GTCCATGATG ACAAGGTCTC 80839 ||| |||||| |||||||||| || | || | ||| || ||||||||| |||||||| CATTTGTTGA GCCCTCATTT CTGGGAATTC TTAATGTTAA GTCCATGATT CAAAGGTCTC 181 ATGACATATG AATGAATAAT ATGAAAGAAG TTATGTG-T- --T--ATA-T G--TTATGTG 80788 ||| |||||| || ||| || || ||||||| | ||||| | | | | | | || | || ATGGCATATG -ATAAATGAT ATTAAAGAAG TGATGTGCTA CATGCAAATT GTATTTTATG 240 -C-TATGATA --TG-TA--T AAAGATGTTA TGTGTTGTGT GCAATACGAT TATTA-TAAT 80736 | ||| ||| || || | | |||||| |||| | ||| | || | | | | | | || CCATATCATA TGTGCTATGT GTAAATGTTA TGTGCTATGT GGAA-ATGTT AAAAACTGAT 299 GATGCATGTT ACTCTCATGG CATAACCTTC CTA-ACTCAA TTTGGAAAGT TCACTAACTT 80677 |||| | ||| | |||||||| |||||| ||| ||| || || | | ||||| ||||| |||| GATGTACGTT ATTCTCATGG CATAACTTTC CTATTCTAAA TCTAGAAAGC TCACTGACTT 359 TCGTAA-CC- ----T--CAA --TT--T-A- -GC--AT-G- ----TCCACT GACTTAACCT 80640 || ||| || | || || | | | || | |||||| |||| | || TCCTAATCCA TATTTGGAAA CCTTCGTAAT CACAAATTGG CAGGTCCACT AACTTGA-CT 418 TCCATAAATC ATGTTTTTAG GAAAGAGTTA TTCCTTGTTA TGCATGTGCT TGGTGTGTTC 80580 |||| ||| | ||||| |||| |||||| ||| ||| || ||| ||||||| | |||||||| | TCCAAAAACC ATGTTGTTAG GAAAGAATTA TTCTTTCTTA TGCATGTCAT TGGTGTGTGC 478 TTGAAGATAC GCATACTTAG TACAAGTGT- TAGT-TCCAT ACA-AATATC TAC--TTTTA 80525 ||| | |||| ||||||||| ||||||||| || | || | | | || || ||| ||||| TTGCATATAC CCATACTTAG TACAAGTGTG TACTAACCCT ATACAAACTC TACTATTTTA 538 GGTGCAGGCA CAGGTGGGCG TA-GAGCTAT AGGTTCGTTG TTGCTGCTAT CCGGACG-TC 80467 |||||| || || ||| || | || ||| ||| || | | ||| | ||| |||||| | GGTGCAACCA CAACTGGACG AATGAACTAA AGGATCTTCG CTGCAGTTAT TCGGACGTTT 598 AGCATTCATT CGGAGTTTGG TAGGTCCTCG TGCTTTTGAG GATGCTACTG TATTACATTC 80407 |||||||| ||| ||||| ||||||||| || ||| ||| |||||| || | ||| |||| AGCATTCAAC CGG-CTTTGG TAGGTCCTCA TGATTTCGAG GATGCTGTTG TTTTATATTC 657 TTGCGTAGTT TTTGAATTGA GCTAGCGAAG CATGTTCCAC TAGCGTTTCT TTCCTGTT 80349 | || ||||| || || |||| ||| | | |||||||||| ||| ||||| ||||| || TAGCTTAGTT TTAGAGTTGA TGTAGTGGAT CATGTTCCAC TAGTGTTTCC TTCCTATT 715 hqPGS_C01HBa0163B20.1-_SGN-E389503- (81017 80349) ******************************************************************************** EST sequence 220 +strand 687 n (File: SGN-E389994+) 1 ACATAATGAA ATGAATGATA TCAAAGTTGT TTGGATAGGA TAATCACAAG GTGAGTTAGA 61 TTCAAGTAAT GACATTAGGT CATTCTTAGT CATTGCACAA TGAACCTAAT GAAAGTCTCA 121 AACTACATCC TAGGTATAGT TTGTGTTTAC ACTGGCCTAT GAATGAAATG AAATGTAGTA 181 CGTATGAATG AAAGAAGCAG GCTATGTGTT TGCTAATGAA GACTCCCTAG TTGAGGTCCC 241 ATTTGTTGAG CCCTCATTTC TGGGAATTCT TAATGTTAAG TCCATGATTC AAAGGTCTCA 301 TGGCATATGA TAAATGATAT TAAAGAAGTG ATGTGCTACA TGCAAATTGT ATTTTATGCC 361 ATATCATATG TGCTATGTGT AAATGTTATG TGCTATGTGG AAATGTTAAA AACTGATGAT 421 GTACGTTATT CTCATGGCAT AACTTTCCTA TTCTAAATCT AGAAAGCTCA CTGACTTTCC 481 TAATCCATAT TTGGAAACCT TCGTAATCAC AAATTGGCAG GTCCACTAAC TTGACTTCCC 541 AAAACCATGT TGTTAGGAAA GAATTATTCT TTCTTATGCA TGTCATTTGG TGTGTGCTTG 601 CATATACCCA TACTTAGTAC AAGTGTGTAC TAACCCTATA CAAACTCTAC TATTTTANGT 661 GCAACCACNA CTGGACGAAT GAACTAA Predicted gene structure (within gDNA segment 82807 to 75988): Exon 1 81134 80755 ( 380 n); cDNA 3 378 ( 376 n); score: 0.796 Intron 1 80754 79975 ( 780 n); Pd: 0.000 (s: 0.62), Pa: 0.849 (s: 0) Exon 2 79974 79950 ( 25 n); cDNA 379 403 ( 25 n); score: 0.680 MATCH C01HBa0163B20.1- SGN-E389994+ 0.796 405 0.590 C PGS_C01HBa0163B20.1-_SGN-E389994+ (81134 80755,79974 79950) Alignment (genomic DNA sequence = upper lines): ATAAAGAAAT TAATGATACC GAAGCTGTTA GGATATGATA ATCAAGAGGT GATCTAGACT 81075 |||| ||||| ||||||| | ||| |||| ||||| |||| |||| |||| || |||| | ATAATGAAAT GAATGATATC AAAGTTGTTT GGATAGGATA ATCACAAGGT GAGTTAGATT 62 CAGGTAATGA CGTTAGGTTA TTCCTGATCA TTGCACAGCA AACCCAATGA GAGTCTTAAA 81015 || ||||||| | |||||| | ||| | ||| ||||||| |||| ||||| ||||| ||| CAAGTAATGA CATTAGGTCA TTCTTAGTCA TTGCACAATG AACCTAATGA AAGTCTCAAA 122 CTACATCCTA GGTATAGGTG GTGTCCACAC TGGCCTATGA ATGAAATGAA ATGAAGTATG 80955 |||||||||| ||||||| | |||| |||| |||||||||| |||||||||| ||| |||| | CTACATCCTA GGTATAGTTT GTGTTTACAC TGGCCTATGA ATGAAATGAA ATGTAGTACG 182 TATGAATGGA TGAAGCAGAC TCTATGTTTT CTAATGAAGA CTCCCTAGTT TAGGTCACAT 80895 |||||||| | ||||||| | | | ||||| |||||||||| |||||||||| ||||| ||| TATGAATGAA AGAAGCAGGC TATGTGTTTG CTAATGAAGA CTCCCTAGTT GAGGTCCCAT 242 ATGTTGAGCC CTCATTT-TG AAACGTCTAA ATACCAAGTC CATGATGACA AGGTCTCATG 80836 ||||||||| ||||||| || | ||| | || ||||| |||||| | |||||||||| TTGTTGAGCC CTCATTTCTG GGAATTCTTA ATGTTAAGTC CATGATTCAA AGGTCTCATG 302 ACATATGAAT GAATAATATG AAAGAAGTTA TGTGTTATAT GTTATGTGCT ATGATATGTA 80776 |||||| || ||| |||| |||||||| | |||| || || | | || | || |||| GCATATG-AT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTG-T ATTTTATG-- 358 TAAAGATGTT ATGTGTTGTG TGCAATACGA TTATTATAAT GATGCATGTT ACTCTCATGG 80716 | || | ||||| | || | -CCATATCAT ATGTGCTATG T......... .......... .......... .......... 378 CATAACCTTC CTAACTCAAT TTGGAAAGTT CACTAACTTT CGTAACCTCA ATTTAGCATG 80656 .......... .......... .......... .......... .......... .......... 378 TCCACTGACT TAACCTTCCA TAAATCATGT TTTTAGGAAA GAGTTATTCC TTGTTATGCA 80596 .......... .......... .......... .......... .......... .......... 378 TGTGCTTGGT GTGTTCTTGA AGATACGCAT ACTTAGTACA AGTGTTAGTT CCATACAAAT 80536 .......... .......... .......... .......... .......... .......... 378 ATCTACTTTT AGGTGCAGGC ACAGGTGGGC GTAGAGCTAT AGGTTCGTTG TTGCTGCTAT 80476 .......... .......... .......... .......... .......... .......... 378 CCGGACGTCA GCATTCATTC GGAGTTTGGT AGGTCCTCGT GCTTTTGAGG ATGCTACTGT 80416 .......... .......... .......... .......... .......... .......... 378 ATTACATTCT TGCGTAGTTT TTGAATTGAG CTAGCGAAGC ATGTTCCACT AGCGTTTCTT 80356 .......... .......... .......... .......... .......... .......... 378 TCCTGTTTTG ATTCAAACAT TGTATTGGTG CCATTTTGGC AATTATACAA TTAAGACTTA 80296 .......... .......... .......... .......... .......... .......... 378 CTGAACTATT TCTTTCAGTT GCTTATCTCT TTAATATTAG ATTATTGATG ATGAACGATT 80236 .......... .......... .......... .......... .......... .......... 378 ATGAAGTGTT AAGAATGTTT ATAAAGTATG TTTAAAGAAT CAAAAGTTTC AAATTTTCAG 80176 .......... .......... .......... .......... .......... .......... 378 CTAAAATTAA CCTATGTAAT GTAAGGATGA CGTAAGTAGG CTTGTTTGCG ACCTCTGAGA 80116 .......... .......... .......... .......... .......... .......... 378 GGTCAACATG GCCGGTCTGG TTTGCGGTCT AGATTTTAGT CGTGACAAGG TTGTGATATC 80056 .......... .......... .......... .......... .......... .......... 378 ATATTATTTC ACCATGATCG ATGAAGACCA TTGCATCTAT GTAAAAAGTC CAATGGAAAA 79996 .......... .......... .......... .......... .......... .......... 378 TTTGTAATTC TTTCTCTTTA GGTAGATGAT ATTTTATTTG GTGAAA 79950 ||| ||| | || | | || |||| .......... .......... .GTAAATGTT ATGTGCTATG TGGAAA 403 hqPGS_C01HBa0163B20.1-_SGN-E389994+ (81134 80755) ******************************************************************************** EST sequence 256 +strand 617 n (File: SGN-E235464+) 1 CATAATGAAA TGAATGATAT CAAAGTTGTT TGGATAGGAT AATCACAAGG TGAGTTAGAT 61 TCAAGTAATG ACATTAGGTC ATTCTTAGTC ATTGCACAAT GAACCTAATG AAAGTCTCAA 121 ACTACATCCT AGGTATAGTT TGTGTTTACA CTGGCCTATG AATGAAATGA AATGTAGTAC 181 GTATGAATGA AAGAAGCAGG CTATGTGTTT GCTAATGAAG ACTCCCTAGT TGAGGTCCCA 241 TTTGTTGAGC CCTCATTTCT GGGAATTCTT AATGTTAAGT CCATGATTCA AAGGTCTCAT 301 GGCATATGAT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTGTA TTTTATGCCA 361 TATCATATGT GCTATGTGTA AATGTTATGT GCTATGTGGA AATGTTAAAA ACTGATGATG 421 TACGTTATTC TCATGGCATA ACTTTCCTAT TCTAAATCTA GAAAGCTCAC TGACTTTCCT 481 AATCCATATT TGGAAACCTT CGTAATCACA AATTGGCAGG TCCACTAACT TGACTTCCAA 541 AAACCATGTT GTTAGGAAAG AATTATTCTT TCTTATGCAT GTCATTGGTG TGTGCTTGCA 601 TATACCCATA CTTAGTA Predicted gene structure (within gDNA segment 82797 to 76678): Exon 1 81134 80755 ( 380 n); cDNA 2 377 ( 376 n); score: 0.796 Intron 1 80754 79975 ( 780 n); Pd: 0.000 (s: 0.62), Pa: 0.849 (s: 0) Exon 2 79974 79950 ( 25 n); cDNA 378 402 ( 25 n); score: 0.680 MATCH C01HBa0163B20.1- SGN-E235464+ 0.796 405 0.656 C PGS_C01HBa0163B20.1-_SGN-E235464+ (81134 80755,79974 79950) Alignment (genomic DNA sequence = upper lines): ATAAAGAAAT TAATGATACC GAAGCTGTTA GGATATGATA ATCAAGAGGT GATCTAGACT 81075 |||| ||||| ||||||| | ||| |||| ||||| |||| |||| |||| || |||| | ATAATGAAAT GAATGATATC AAAGTTGTTT GGATAGGATA ATCACAAGGT GAGTTAGATT 61 CAGGTAATGA CGTTAGGTTA TTCCTGATCA TTGCACAGCA AACCCAATGA GAGTCTTAAA 81015 || ||||||| | |||||| | ||| | ||| ||||||| |||| ||||| ||||| ||| CAAGTAATGA CATTAGGTCA TTCTTAGTCA TTGCACAATG AACCTAATGA AAGTCTCAAA 121 CTACATCCTA GGTATAGGTG GTGTCCACAC TGGCCTATGA ATGAAATGAA ATGAAGTATG 80955 |||||||||| ||||||| | |||| |||| |||||||||| |||||||||| ||| |||| | CTACATCCTA GGTATAGTTT GTGTTTACAC TGGCCTATGA ATGAAATGAA ATGTAGTACG 181 TATGAATGGA TGAAGCAGAC TCTATGTTTT CTAATGAAGA CTCCCTAGTT TAGGTCACAT 80895 |||||||| | ||||||| | | | ||||| |||||||||| |||||||||| ||||| ||| TATGAATGAA AGAAGCAGGC TATGTGTTTG CTAATGAAGA CTCCCTAGTT GAGGTCCCAT 241 ATGTTGAGCC CTCATTT-TG AAACGTCTAA ATACCAAGTC CATGATGACA AGGTCTCATG 80836 ||||||||| ||||||| || | ||| | || ||||| |||||| | |||||||||| TTGTTGAGCC CTCATTTCTG GGAATTCTTA ATGTTAAGTC CATGATTCAA AGGTCTCATG 301 ACATATGAAT GAATAATATG AAAGAAGTTA TGTGTTATAT GTTATGTGCT ATGATATGTA 80776 |||||| || ||| |||| |||||||| | |||| || || | | || | || |||| GCATATG-AT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTG-T ATTTTATG-- 357 TAAAGATGTT ATGTGTTGTG TGCAATACGA TTATTATAAT GATGCATGTT ACTCTCATGG 80716 | || | ||||| | || | -CCATATCAT ATGTGCTATG T......... .......... .......... .......... 377 CATAACCTTC CTAACTCAAT TTGGAAAGTT CACTAACTTT CGTAACCTCA ATTTAGCATG 80656 .......... .......... .......... .......... .......... .......... 377 TCCACTGACT TAACCTTCCA TAAATCATGT TTTTAGGAAA GAGTTATTCC TTGTTATGCA 80596 .......... .......... .......... .......... .......... .......... 377 TGTGCTTGGT GTGTTCTTGA AGATACGCAT ACTTAGTACA AGTGTTAGTT CCATACAAAT 80536 .......... .......... .......... .......... .......... .......... 377 ATCTACTTTT AGGTGCAGGC ACAGGTGGGC GTAGAGCTAT AGGTTCGTTG TTGCTGCTAT 80476 .......... .......... .......... .......... .......... .......... 377 CCGGACGTCA GCATTCATTC GGAGTTTGGT AGGTCCTCGT GCTTTTGAGG ATGCTACTGT 80416 .......... .......... .......... .......... .......... .......... 377 ATTACATTCT TGCGTAGTTT TTGAATTGAG CTAGCGAAGC ATGTTCCACT AGCGTTTCTT 80356 .......... .......... .......... .......... .......... .......... 377 TCCTGTTTTG ATTCAAACAT TGTATTGGTG CCATTTTGGC AATTATACAA TTAAGACTTA 80296 .......... .......... .......... .......... .......... .......... 377 CTGAACTATT TCTTTCAGTT GCTTATCTCT TTAATATTAG ATTATTGATG ATGAACGATT 80236 .......... .......... .......... .......... .......... .......... 377 ATGAAGTGTT AAGAATGTTT ATAAAGTATG TTTAAAGAAT CAAAAGTTTC AAATTTTCAG 80176 .......... .......... .......... .......... .......... .......... 377 CTAAAATTAA CCTATGTAAT GTAAGGATGA CGTAAGTAGG CTTGTTTGCG ACCTCTGAGA 80116 .......... .......... .......... .......... .......... .......... 377 GGTCAACATG GCCGGTCTGG TTTGCGGTCT AGATTTTAGT CGTGACAAGG TTGTGATATC 80056 .......... .......... .......... .......... .......... .......... 377 ATATTATTTC ACCATGATCG ATGAAGACCA TTGCATCTAT GTAAAAAGTC CAATGGAAAA 79996 .......... .......... .......... .......... .......... .......... 377 TTTGTAATTC TTTCTCTTTA GGTAGATGAT ATTTTATTTG GTGAAA 79950 ||| ||| | || | | || |||| .......... .......... .GTAAATGTT ATGTGCTATG TGGAAA 402 hqPGS_C01HBa0163B20.1-_SGN-E235464+ (81134 80755) ******************************************************************************** EST sequence 124 +strand 832 n (File: SGN-E548992+) 1 TTTCTTTTTT AATTTATTTC TTAACTTTCT CACCTATCCA AGAGGCTGTG GGTTCAATCC 61 CCACTCTCCA CATTTATTTT TCTCCTTTAT TTTTCTCCTA ACTCCCCCAT CCATTCAAGA 121 GGTTGTGGGT TCAATCCACT CTCCACATTT TATTTTGCTC TTTTATTTTC ATCCTAACTC 181 TCTCATCCAT TCAAGAGGTT GTGGGTTCAA TCCGAACTCT CCACATTTTA TTTTCTCCTT 241 TATGTTTCCC CTAACTATCT CATCCATTCA AGAGGTTGTG GGTTCAATCC CCACTCTCCA 301 CGTTTTATTT TCTCCTTTAT GTTTCTCCTA ACTCTCTCAT CCATTCAAGA AGTTGTGGGT 361 TCAACCCCCA CTCTCCACAT TTCATTTTTT TACTTTTTTA TTTTCATGGT TTTTAAACAT 421 GGTGAGGTCA CGGGTTCAAT CCTCCATGAC CTCACTTGTT TTAATTTATT TTTTTTCAAC 481 ATTTTGAACC CTCTTTGCTG ACCGAAATTC ATCAATAGAA GCTAAAAATT TTCTTTTAAT 541 TTTTCAGCAT CCTTTCATCA AGTTACACCT TAGTTCTTAG GGGAATTTCG TAGTGCATTT 601 ATAACCATAT AGGTGCGTCT TTATGTATTC GTTTAGCTAA GACATTATCC CTGAAATCAG 661 CCACATTTCA ACTCATATGA ACATCACATT TATATTAACA TGTGTACATG AAATATAAAG 721 AACTATCATG CCATTTGAAG TCCTAAACCA TGAACAATAG CCATGGCAAC AGACACATAC 781 ATACGTAGTT ACATTTTCGG AAACACAACA TAAGTCACAT AATTTCAACA TA Predicted gene structure (within gDNA segment 79847 to 83879): Exon 1 81825 81834 ( 10 n); cDNA 263 272 ( 10 n); score: 0.800 Intron 1 81835 82630 ( 796 n); Pd: 0.119 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 82631 83198 ( 568 n); cDNA 273 832 ( 560 n); score: 0.866 MATCH C01HBa0163B20.1+ SGN-E548992+ 0.866 578 0.695 C PGS_C01HBa0163B20.1+_SGN-E548992+ (81825 81834,82631 83198) Alignment (genomic DNA sequence = upper lines): TCCATTCAGT GTATCTTACA CTCGTACTTA ACCCTCCTAA GGTTCATCAT TTAATTACGT 81884 |||||||| TCCATTCAAG .......... .......... .......... .......... .......... 272 ACATCTTAGG TTCACTTATT TTTGAACGTA TGTTAGACTC ATGTGTCTAT ACATAAAAGC 81944 .......... .......... .......... .......... .......... .......... 272 CATGGGGCTT CATTCATAGT TCGCTAAGTG ATTCTTACTT TCATAAGATT ATGTATTACA 82004 .......... .......... .......... .......... .......... .......... 272 AGACTTATGT ATCTTGTATA TATGACAAGA TCTTGATTTT TGATCTAAGT AGATGGCATT 82064 .......... .......... .......... .......... .......... .......... 272 ACTCTTGGAT ATTTTACTCA CGTATGACTT ATGTATCAAT ATGGAAGTTT GGGCACGAGA 82124 .......... .......... .......... .......... .......... .......... 272 ACCCAAGTCT TGAATCACTT GGATATCATT TATATTTTTC ATCAATTTTA TTTCTAATAT 82184 .......... .......... .......... .......... .......... .......... 272 TCATAACATT ATACTCTAAA TTAAATCTCA ACATTTATAT CGAAGGATTA ATTTTCTATT 82244 .......... .......... .......... .......... .......... .......... 272 TTAATTAGAA TTCTAAATTA AATCTCAACA TTTACATGAG AGGATTAATT TTCTATTTTA 82304 .......... .......... .......... .......... .......... .......... 272 ATTAGAATTT TAAATTAAAT CTCAATATTT ACATGAAAGG ATTAATTTTA TATTTTAATT 82364 .......... .......... .......... .......... .......... .......... 272 AGAATTCTAA ATTAAATCTC AACATTTACA TGAAAGGATT AATCTTCTAT TTTAATCAGA 82424 .......... .......... .......... .......... .......... .......... 272 ATTTTAAATT AAATCTCAAC ATTTACATGA AGGTATTAAT TTTTCTATCT TAATTTTACT 82484 .......... .......... .......... .......... .......... .......... 272 CTTAGTTAAC CGAAGGGTTG GGGGTTCGAG CACCCACAAC CCCTTTGATT TTTTTGAGTT 82544 .......... .......... .......... .......... .......... .......... 272 AAATTCAATA CAATAGGGAG GTTATGGGTT CGAACCCCCA CAGCCCCCCT TATTTTTTTT 82604 .......... .......... .......... .......... .......... .......... 272 TAAATTTCGC CGAGGAGGTG GCTGTGAGGT AGTGGGTTTG ATGCCCACTC TTCACATTTT 82664 |||| ||||||| || ||||||| | ||| |||| .......... .......... ......AGGT TGTGGGTTCA ATCCCCACTC TCCACGTTTT 306 ATTTTCTCCT TTATTTTCCT CCTAACTCTC TCATCCATTC AAGAGGTTGT GGGTTTGATC 82724 |||||||||| |||| || || |||||||||| |||||||||| |||| ||||| ||||| | | ATTTTCTCCT TTATGTTTCT CCTAACTCTC TCATCCATTC AAGAAGTTGT GGGTTCAACC 366 CCCACTTTCC ACATTTTA-- TTTTTACTTC TTTATTTTCG TGATTTTT-A ACATGTTGAG 82781 |||||| ||| |||||| | ||||||||| ||||||||| || ||||| | ||||| |||| CCCACTCTCC ACATTTCATT TTTTTACTTT TTTATTTTCA TGGTTTTTAA ACATGGTGAG 426 GTAACGGGTT CAATCCTCCA TTACCTCACT TGTTTTAATT TATTTTTTTT CAATATTTTG 82841 || ||||||| |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| GTCACGGGTT CAATCCTCCA TGACCTCACT TGTTTTAATT TATTTTTTTT CAACATTTTG 486 AACCCTCTTT GCTGACAAAA ATTCATCAAT AGAAACTGGA AATTTTCTTT TAATTTTTCA 82901 |||||||||| |||||| || |||||||||| |||| || | |||||||||| |||||||||| AACCCTCTTT GCTGACCGAA ATTCATCAAT AGAAGCTAAA AATTTTCTTT TAATTTTTCA 546 GCATCCTTTT ATCAAGTTAC ACCTTGGTTC ATAGGGGAAT TTTGTAGTGC ATTTAGAACG 82961 ||||||||| |||||||||| ||||| |||| ||||||||| || ||||||| ||||| ||| GCATCCTTTC ATCAAGTTAC ACCTTAGTTC TTAGGGGAAT TTCGTAGTGC ATTTATAACC 606 TTTTAGGTGT GTCTTCATGT ATTCATTTAG CCAAGATATT ATCCCTCAAA TCAGCCACAT 83021 | |||||| ||||| |||| |||| ||||| | |||| ||| |||||| ||| |||||||||| ATATAGGTGC GTCTTTATGT ATTCGTTTAG CTAAGACATT ATCCCTGAAA TCAGCCACAT 666 TTCAACT-AT ATAAACATCA CATTTATATC AACATGTGTA TACATGTGTA GATGAAATAT 83080 ||||||| || || ||||||| || || ||| | | || ||||||||| ||||||||| TTCAACTCAT ATGAACATCA CA-TT-TAT- ---A--T-TA -ACATGTGTA CATGAAATAT 716 ATAGAACTAT CATGCCATTT CAACTCCTAA ACCATGAACA ATACCCACGA CAATAGACAC 83140 | |||||||| |||||||||| || |||||| |||||||||| ||| ||| | ||| |||||| AAAGAACTAT CATGCCATTT GAAGTCCTAA ACCATGAACA ATAGCCATGG CAACAGACAC 776 ATACACACGT AGTTACATTT TCAGAAATAT CAACATAAGT CACATAATTC CAAACCTA 83198 ||||| |||| |||||||||| || |||| | |||||||||| ||||||||| | ||| || ATACATACGT AGTTACATTT TCGGAAACA- CAACATAAGT CACATAATTT C-AACATA 832 hqPGS_C01HBa0163B20.1+_SGN-E548992+ (82631 83198) ******************************************************************************** EST sequence 143 +strand 610 n (File: SGN-E345632+) 1 TTTTATTTTC TCCTTTATGT TTCTCCTAAC TCTCTCATCC ATTCAAGAAT GTTGTGGGTT 61 CAACCCCCAC TCTCCACATT TCATTTTTTT ACTTTTTTAT TTTCATGGTT TTTAAACATG 121 GTGAGGTCAC GGGTTCAATC CTCCATGACC TCACTTGTTT TAATTTATTT TTTTTCAACA 181 TTTTGAACCC TCTTTGCTGA CCGAAATTCA TCAATAGAAG CTAAAAATTT TCTTTTAATT 241 TTTCAGCATC CTTTCATCAA GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA 301 TAACCATATA GGTGCGTCTT TATGTATTCG TTTAGCTAAG ACATTATCCC TGAAATCAGC 361 CACATTTCAA CTCATATGAA CATCACATTT ATATTAACAT GTGTACATGA AATATAAAGA 421 ACTATCATGC CATTTGAAGT CCTAAACCAT GAACAATAGC CATGGCAACA GACACATACA 481 TACGTAGTTA CATTTTCGGA AACATCTTCA TTGTTCTCAA GTCAGATTCA ACATTCTGAT 541 TTTCTTCAAA AAAAAAAAAA AAAAAAAAAA AANNNNNNNN NNNNANAAAA AAAAAAAAAA 601 AAAAAAAAAA Predicted gene structure (within gDNA segment 80905 to 85819): Exon 1 82661 83181 ( 521 n); cDNA 1 516 ( 516 n); score: 0.859 PPA cDNA 560 573 MATCH C01HBa0163B20.1+ SGN-E345632+ 0.859 521 0.854 C PGS_C01HBa0163B20.1+_SGN-E345632+ (82661 83181) Alignment (genomic DNA sequence = upper lines): TTTTATTTTC TCCTTTATTT TCCTCCTAAC TCTCTCATCC ATTCAAG-AG GTTGTGGGTT 82719 |||||||||| |||||||| | | |||||||| |||||||||| ||||||| | |||||||||| TTTTATTTTC TCCTTTATGT TTCTCCTAAC TCTCTCATCC ATTCAAGAAT GTTGTGGGTT 60 TGATCCCCAC TTTCCACATT T--TATTTTT ACTTCTTTAT TTTCGTGATT TTT-AACATG 82776 | |||||| | |||||||| | | ||||| |||| ||||| |||| || || ||| |||||| CAACCCCCAC TCTCCACATT TCATTTTTTT ACTTTTTTAT TTTCATGGTT TTTAAACATG 120 TTGAGGTAAC GGGTTCAATC CTCCATTACC TCACTTGTTT TAATTTATTT TTTTTCAATA 82836 |||||| || |||||||||| |||||| ||| |||||||||| |||||||||| |||||||| | GTGAGGTCAC GGGTTCAATC CTCCATGACC TCACTTGTTT TAATTTATTT TTTTTCAACA 180 TTTTGAACCC TCTTTGCTGA CAAAAATTCA TCAATAGAAA CTGGAAATTT TCTTTTAATT 82896 |||||||||| |||||||||| | ||||||| ||||||||| || |||||| |||||||||| TTTTGAACCC TCTTTGCTGA CCGAAATTCA TCAATAGAAG CTAAAAATTT TCTTTTAATT 240 TTTCAGCATC CTTTTATCAA GTTACACCTT GGTTCATAGG GGAATTTTGT AGTGCATTTA 82956 |||||||||| |||| ||||| |||||||||| |||| |||| ||||||| || |||||||||| TTTCAGCATC CTTTCATCAA GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA 300 GAACGTTTTA GGTGTGTCTT CATGTATTCA TTTAGCCAAG ATATTATCCC TCAAATCAGC 83016 ||| | || |||| ||||| |||||||| |||||| ||| | |||||||| | |||||||| TAACCATATA GGTGCGTCTT TATGTATTCG TTTAGCTAAG ACATTATCCC TGAAATCAGC 360 CACATTTCAA CT-ATATAAA CATCACATTT ATATCAACAT GTGTATACAT GTGTAGATGA 83075 |||||||||| || |||| || |||||||||| |||| ||||| |||| ||| ||| CACATTTCAA CTCATATGAA CATCACATTT ATATTAACAT GTGT--ACA- -------TGA 410 AATATATAGA ACTATCATGC CATTTCAACT CCTAAACCAT GAACAATACC CACGACAATA 83135 |||||| ||| |||||||||| ||||| || | |||||||||| |||||||| | || | ||| | AATATAAAGA ACTATCATGC CATTTGAAGT CCTAAACCAT GAACAATAGC CATGGCAACA 470 GACACATACA CACGTAGTTA CATTTTCAGA AATATCAACA TAAGTC 83181 |||||||||| ||||||||| ||||||| || || ||| || | || GACACATACA TACGTAGTTA CATTTTCGGA AACATCTTCA TTGTTC 516 hqPGS_C01HBa0163B20.1+_SGN-E345632+ (82661 83181) ******************************************************************************** EST sequence 147 +strand 574 n (File: SGN-E356167+) 1 TTGTTACATT ATCCCCCCCC CCCCTTTGGA ACATTCATCC CCGAATGAAA CTACAACTTC 61 AAATCGTGCT GTTGGTCAGA TCACAATAAA ATCACTATGA ACAATCAATC AATAGCAACA 121 AAATACAGAG AGATAAGGAA ACATAGGCTT AAAAGTATGA AGTCTAACTT CAAGAGATGA 181 AAAGATAAGG GTAGTGGAAT CTCAAGCCGG CCTCAGCCTC CCACGTAGCA CCCTCAAAAA 241 GATGATTTCT CCACAATAAC TTCACTATGA CAATCTCTTT GTTCCTCAGC CGCTTGACCA 301 GTCTATCTAA GACCTCAACA GGTACCTCCT CATAAGAGAA GTATTCACCG ACCCCCAAAC 361 CTTCAACATG TAGGATTGAT GATGGATCAC CTAGGCACTT CTTCTACATA GAGACATGAA 421 AGACTGGATG AACAGAATAT CATCACCCCT TTCATAGGTG ATATCTTCAA GTCAACCTGT 481 TCACCAACAT CAAACTCTAA GGGTCGTTTT CAGTTATCAA CATATGACTT CTGTCGGCTG 541 TAAGCAGTAG CCAACATGTC CCTAATAACT CTGA Predicted gene structure (within gDNA segment 81364 to 86243): Exon 1 83835 84263 ( 429 n); cDNA 9 437 ( 429 n); score: 0.825 Intron 1 84264 84367 ( 104 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0.86) Exon 2 84368 84502 ( 135 n); cDNA 438 572 ( 135 n); score: 0.852 MATCH C01HBa0163B20.1+ SGN-E356167+ 0.832 564 0.983 C PGS_C01HBa0163B20.1+_SGN-E356167+ (83835 84263,84368 84502) Alignment (genomic DNA sequence = upper lines): TTACATTATC TCCCCCTTAG GAACATTCGT CCCCGAATGA CACTACTATT ACACATCAAA 83894 ||| | ||||||| | |||||||| | |||||||||| ||||| | | || ||| TTATCCCCCC CCCCCCTTTG GAACATTCAT CCCCGAATGA AACTACAACT TCAAATCGTG 68 ATGTCAATCA GATCATAACT TAATCGCCAT GTACAGTCTG CCAATAGCAA CAAAATACCA 83954 ||| ||| ||||| || |||| | || | ||| || ||||||||| |||||||| CTGTTGGTCA GATCACAATA AAATCACTAT GAACAATCAA TCAATAGCAA CAAAATACAG 128 AGAGATAAGT AACTATAGCC TTACGAGTAG GAAGTCTAAC CTCAAGAGCT GAAAAGATGA 84014 ||||||||| || |||| | ||| |||| |||||||||| ||||||| | |||||||| | AGAGATAAGG AAACATAGGC TTAAAAGTAT GAAGTCTAAC TTCAAGAGAT GAAAAGATAA 188 GGATAACAGG ATCTCATGTC GGCCTCAGCC TCCCACATAG CACCCTCAAC AAGATGATTT 84074 || || | |||||| | | |||||||||| |||||| ||| ||||||||| |||||||||| GGGTAGTGGA ATCTCAAGCC GGCCTCAGCC TCCCACGTAG CACCCTCAAA AAGATGATTT 248 CTCCACAATA CATTCACTGT GGCAATCTTC TTGTTCCTCA GCCTTTTGAC CTGTCTGTCT 84134 |||||||||| |||||| | | |||||| |||||||||| ||| ||||| | |||| ||| CTCCACAATA ACTTCACTAT GACAATCTCT TTGTTCCTCA GCCGCTTGAC CAGTCTATCT 308 AAGATCTCAA CAAGTACATC CTCATAAGAC AAGTCTTCAC CAACCCCCTA ACCTTCAATA 84194 |||| ||||| || |||| || ||||||||| |||| ||||| | |||||| | |||||||| | AAGACCTCAA CAGGTACCTC CTCATAAGAG AAGTATTCAC CGACCCCCAA ACCTTCAACA 368 GGTAGCATTG ATGTTGGATC ACCTAGGCAC TTCTTCAACA TAGAGACATG AAAGACTGGA 84254 |||| |||| ||| |||||| |||||||||| |||||| ||| |||||||||| |||||||||| TGTAGGATTG ATGATGGATC ACCTAGGCAC TTCTTCTACA TAGAGACATG AAAGACTGGA 428 TGAACAGAAG TTAGCTCCGC AGGCAATACT AGCTAATAGG CCACCTCACC CACACGCTGT 84314 ||||||||| TGAACAGAA. .......... .......... .......... .......... .......... 437 AGGATCGCAT ATGAACACAC ATACCTCGGA CTCAGCTTCC CCTTTTTACC AAATCTCATC 84374 | ||||| .......... .......... .......... .......... .......... ...TATCATC 444 ACCCCTTTCA TAGGAGATAT CTTCAAGTAA GCCAGGTCAC AAACATTAAT TTCTAAGGGC 84434 |||||||||| |||| ||||| |||||||| | || | |||| ||||| || |||||||| ACCCCTTTCA TAGGTGATAT CTTCAAGTCA ACCTGTTCAC CAACATCAAA CTCTAAGGGT 504 CACTTTCTGT TATCTGGATA TGATTTCTGT CGGCTGTAAG CAGTAGCCAA CTTGTCCCTA 84494 | |||| || |||| ||| ||| |||||| |||||||||| |||||||||| | |||||||| CGTTTTCAGT TATCAACATA TGACTTCTGT CGGCTGTAAG CAGTAGCCAA CATGTCCCTA 564 ATCACTCT 84502 || ||||| ATAACTCT 572 hqPGS_C01HBa0163B20.1+_SGN-E356167+ (83835 84263,84368 84502) ******************************************************************************** EST sequence 123 +strand 832 n (File: SGN-E548992+) 1 TTTCTTTTTT AATTTATTTC TTAACTTTCT CACCTATCCA AGAGGCTGTG GGTTCAATCC 61 CCACTCTCCA CATTTATTTT TCTCCTTTAT TTTTCTCCTA ACTCCCCCAT CCATTCAAGA 121 GGTTGTGGGT TCAATCCACT CTCCACATTT TATTTTGCTC TTTTATTTTC ATCCTAACTC 181 TCTCATCCAT TCAAGAGGTT GTGGGTTCAA TCCGAACTCT CCACATTTTA TTTTCTCCTT 241 TATGTTTCCC CTAACTATCT CATCCATTCA AGAGGTTGTG GGTTCAATCC CCACTCTCCA 301 CGTTTTATTT TCTCCTTTAT GTTTCTCCTA ACTCTCTCAT CCATTCAAGA AGTTGTGGGT 361 TCAACCCCCA CTCTCCACAT TTCATTTTTT TACTTTTTTA TTTTCATGGT TTTTAAACAT 421 GGTGAGGTCA CGGGTTCAAT CCTCCATGAC CTCACTTGTT TTAATTTATT TTTTTTCAAC 481 ATTTTGAACC CTCTTTGCTG ACCGAAATTC ATCAATAGAA GCTAAAAATT TTCTTTTAAT 541 TTTTCAGCAT CCTTTCATCA AGTTACACCT TAGTTCTTAG GGGAATTTCG TAGTGCATTT 601 ATAACCATAT AGGTGCGTCT TTATGTATTC GTTTAGCTAA GACATTATCC CTGAAATCAG 661 CCACATTTCA ACTCATATGA ACATCACATT TATATTAACA TGTGTACATG AAATATAAAG 721 AACTATCATG CCATTTGAAG TCCTAAACCA TGAACAATAG CCATGGCAAC AGACACATAC 781 ATACGTAGTT ACATTTTCGG AAACACAACA TAAGTCACAT AATTTCAACA TA Predicted gene structure (within gDNA segment 88203 to 92523): Exon 1 91369 91878 ( 510 n); cDNA 322 832 ( 511 n); score: 0.915 MATCH C01HBa0163B20.1+ SGN-E548992+ 0.915 510 0.613 C PGS_C01HBa0163B20.1+_SGN-E548992+ (91369 91878) Alignment (genomic DNA sequence = upper lines): TTCCTCCTTA CTCTCTCATC CATTCAAGAG GTTGTGGGTT CAATCCCCAC TTTCCACATT 91428 || ||||| | |||||||||| ||||||||| |||||||||| ||| |||||| | |||||||| TTTCTCCTAA CTCTCTCATC CATTCAAGAA GTTGTGGGTT CAACCCCCAC TCTCCACATT 381 TTA-TATTT- ACTTCTTTAT TTTCATGGTT TTT-AACATG GTGAAGTCAC GGGTTCAATC 91485 | | | ||| |||| ||||| |||||||||| ||| |||||| |||| ||||| |||||||||| TCATTTTTTT ACTTTTTTAT TTTCATGGTT TTTAAACATG GTGAGGTCAC GGGTTCAATC 441 CTGCATGACC TCACTTGTTT TAATGTAAAT TTTTTCAACA TTTTGAACCC TCTTTGCTGA 91545 || ||||||| |||||||||| |||| || | |||||||||| |||||||||| |||||||||| CTCCATGACC TCACTTGTTT TAATTTATTT TTTTTCAACA TTTTGAACCC TCTTTGCTGA 501 CCAAAATTCA TCAATAGAAG CTGGAAATTT TCTTTTAATT TTTCAGCATC CTTTCATCAA 91605 || ||||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| CCGAAATTCA TCAATAGAAG CTAAAAATTT TCTTTTAATT TTTCAGCATC CTTTCATCAA 561 GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA GAACGTTTTA GGTGTGTCTT 91665 |||||||||| |||||||||| |||||||||| |||||||||| ||| | || |||| ||||| GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA TAACCATATA GGTGCGTCTT 621 CATGTATTCG TTTAGCCAAG ACATTATCCA TCAAATCAGC CACATTTCAA CTCATATGAA 91725 ||||||||| |||||| ||| ||||||||| | |||||||| |||||||||| |||||||||| TATGTATTCG TTTAGCTAAG ACATTATCCC TGAAATCAGC CACATTTCAA CTCATATGAA 681 CATCACATTT ACATCAACAT GTGTATATGA AATATAAAGA ACTATCATGC CATTTCAACT 91785 |||||||||| | || ||||| ||||| |||| |||||||||| |||||||||| ||||| || | CATCACATTT ATATTAACAT GTGTACATGA AATATAAAGA ACTATCATGC CATTTGAAGT 741 CCTAAACCAT GAACAATATC CACGGCAACA GACACATACA CACGTAGTTA CATTTTCGGA 91845 |||||||||| |||||||| | || ||||||| |||||||||| ||||||||| |||||||||| CCTAAACCAT GAACAATAGC CATGGCAACA GACACATACA TACGTAGTTA CATTTTCGGA 801 AACGTCAACA TAAGTCACAT AATTTCAAAC ATA 91878 ||| ||||| |||||||||| |||||| ||| ||| AAC-ACAACA TAAGTCACAT AATTTC-AAC ATA 832 hqPGS_C01HBa0163B20.1+_SGN-E548992+ (91369 91878) ******************************************************************************** EST sequence 142 +strand 610 n (File: SGN-E345632+) 1 TTTTATTTTC TCCTTTATGT TTCTCCTAAC TCTCTCATCC ATTCAAGAAT GTTGTGGGTT 61 CAACCCCCAC TCTCCACATT TCATTTTTTT ACTTTTTTAT TTTCATGGTT TTTAAACATG 121 GTGAGGTCAC GGGTTCAATC CTCCATGACC TCACTTGTTT TAATTTATTT TTTTTCAACA 181 TTTTGAACCC TCTTTGCTGA CCGAAATTCA TCAATAGAAG CTAAAAATTT TCTTTTAATT 241 TTTCAGCATC CTTTCATCAA GTTACACCTT AGTTCTTAGG GGAATTTCGT AGTGCATTTA 301 TAACCATATA GGTGCGTCTT TATGTATTCG TTTAGCTAAG ACATTATCCC TGAAATCAGC 361 CACATTTCAA CTCATATGAA CATCACATTT ATATTAACAT GTGTACATGA AATATAAAGA 421 ACTATCATGC CATTTGAAGT CCTAAACCAT GAACAATAGC CATGGCAACA GACACATACA 481 TACGTAGTTA CATTTTCGGA AACATCTTCA TTGTTCTCAA GTCAGATTCA ACATTCTGAT 541 TTTCTTCAAA AAAAAAAAAA AAAAAAAAAA AANNNNNNNN NNNNANAAAA AAAAAAAAAA 601 AAAAAAAAAA Predicted gene structure (within gDNA segment 89892 to 94128): Exon 1 91372 91848 ( 477 n); cDNA 23 503 ( 481 n); score: 0.912 Intron 1 91849 92959 (1111 n); Pd: 0.000 (s: 0.94), Pa: 0.935 (s: 0) Exon 2 92960 92977 ( 18 n); cDNA 504 520 ( 17 n); score: 0.611 PPA cDNA 560 573 MATCH C01HBa0163B20.1+ SGN-E345632+ 0.912 495 0.811 C PGS_C01HBa0163B20.1+_SGN-E345632+ (91372 91848,92960 92977) Alignment (genomic DNA sequence = upper lines): CTCCTTACTC TCTCATCCAT TCAAGA-GGT TGTGGGTTCA ATCCCCACTT TCCACATTTT 91430 ||||| |||| |||||||||| |||||| || |||||||||| | ||||||| ||||||||| CTCCTAACTC TCTCATCCAT TCAAGAATGT TGTGGGTTCA ACCCCCACTC TCCACATTTC 82 ATATT--TAC TTCTTTATTT TCATGGTTTT T-AACATGGT GAAGTCACGG GTTCAATCCT 91487 || || ||| || ||||||| |||||||||| | |||||||| || ||||||| |||||||||| ATTTTTTTAC TTTTTTATTT TCATGGTTTT TAAACATGGT GAGGTCACGG GTTCAATCCT 142 GCATGACCTC ACTTGTTTTA ATGTAAATTT TTTCAACATT TTGAACCCTC TTTGCTGACC 91547 ||||||||| |||||||||| || || ||| |||||||||| |||||||||| |||||||||| CCATGACCTC ACTTGTTTTA ATTTATTTTT TTTCAACATT TTGAACCCTC TTTGCTGACC 202 AAAATTCATC AATAGAAGCT GGAAATTTTC TTTTAATTTT TCAGCATCCT TTCATCAAGT 91607 ||||||||| |||||||||| |||||||| |||||||||| |||||||||| |||||||||| GAAATTCATC AATAGAAGCT AAAAATTTTC TTTTAATTTT TCAGCATCCT TTCATCAAGT 262 TACACCTTAG TTCTTAGGGG AATTTCGTAG TGCATTTAGA ACGTTTTAGG TGTGTCTTCA 91667 |||||||||| |||||||||| |||||||||| |||||||| | || | |||| || ||||| | TACACCTTAG TTCTTAGGGG AATTTCGTAG TGCATTTATA ACCATATAGG TGCGTCTTTA 322 TGTATTCGTT TAGCCAAGAC ATTATCCATC AAATCAGCCA CATTTCAACT CATATGAACA 91727 |||||||||| |||| ||||| ||||||| | |||||||||| |||||||||| |||||||||| TGTATTCGTT TAGCTAAGAC ATTATCCCTG AAATCAGCCA CATTTCAACT CATATGAACA 382 TCACATTTAC ATCAACATGT GTATATGAAA TATAAAGAAC TATCATGCCA TTTCAACTCC 91787 ||||||||| || ||||||| ||| |||||| |||||||||| |||||||||| ||| || ||| TCACATTTAT ATTAACATGT GTACATGAAA TATAAAGAAC TATCATGCCA TTTGAAGTCC 442 TAAACCATGA ACAATATCCA CGGCAACAGA CACATACACA CGTAGTTACA TTTTCGGAAA 91847 |||||||||| |||||| ||| ||||||||| |||||||| | |||||||||| |||||||||| TAAACCATGA ACAATAGCCA TGGCAACAGA CACATACATA CGTAGTTACA TTTTCGGAAA 502 CGTCAACATA AGTCACATAA TTTCAAACAT ACATATAAAC ACATAATCAT CACAAAAACA 91907 | C......... .......... .......... .......... .......... .......... 503 CGTTTCATCC CTAGTTTACT ACCAGCAAAC ATAACCAACC TATGATTCAA TGGGAGCTAC 91967 .......... .......... .......... .......... .......... .......... 503 TGACTGGGAC ATGCAACGGG GAACAATCCT AGTTTTCGGA ATGAATATTC TGAAACTTAA 92027 .......... .......... .......... .......... .......... .......... 503 GGGGTCTCTT GGGAATGGGA CCAAGAGAGA AAATAACCCA TACCTTTATT GATGTTCAAA 92087 .......... .......... .......... .......... .......... .......... 503 TAAAGAATTT GCTGCCCAAA ACTCTCTCCA GAAATCAGTC AGAGTTACCT CAACTTCCAC 92147 .......... .......... .......... .......... .......... .......... 503 ACCACTCAAC GAACAACTTC TCTTCGCCTT AACGCTTTTG GTTGCTTTGT TTTTCTGAAT 92207 .......... .......... .......... .......... .......... .......... 503 ATTTCATGTG AGTTATTCAA GTGTGAAAAA CTCTTGATTT ATTCTCTGTT TTTTGTTGTG 92267 .......... .......... .......... .......... .......... .......... 503 TTTGGCAGAA TAATGTGTGA GAGAGATGGA GAACGTGAGA GAGAGTTAGT AGGATTAGGA 92327 .......... .......... .......... .......... .......... .......... 503 GACTAAATTT AAGACTTAAA AAATACGATT TAATTAACTT AATAAAAATC TGATTTATTT 92387 .......... .......... .......... .......... .......... .......... 503 TAAATAATAC GTGAAAGGAC AATTGTGCCC TTAAATTTTA GATTTTCAAA TACTAATTAA 92447 .......... .......... .......... .......... .......... .......... 503 ATCATCTTAA GTACCTATTT ATTCAATTTT TTAGGATTGT TACATTCCTT ATGAAATCTC 92507 .......... .......... .......... .......... .......... .......... 503 AGATACAATT GCCTTGAAGA TTGCTTTAGG CCATAACTTG ATCTTTTCAA TTTACAAACT 92567 .......... .......... .......... .......... .......... .......... 503 TTCTTTTCTT GACCTTTAAC AATGAAACCA ACTGGTTGTT CCATATAGAT TTCTTCGTTT 92627 .......... .......... .......... .......... .......... .......... 503 AATTTTACAT TGATAAAAGC GATCTTCACA TCTGTTTGGT GTAATTCTGG ATCTAAACGT 92687 .......... .......... .......... .......... .......... .......... 503 GCAACGATAG CTAAAAGTAA TCGTATGGAC ATAAACTTCA CAACTGGTGA AAGAGTTTCC 92747 .......... .......... .......... .......... .......... .......... 503 TCATAGTCTA TTCCTACTCC TTGAGTAAAA CCTTTTGCAA CCAATCGTGC TTTGTGTCTT 92807 .......... .......... .......... .......... .......... .......... 503 TCTATTGACC AACCTGATTT ACGTTTAACT TTAAGAATCC ATTTATTACC AATATCTTTA 92867 .......... .......... .......... .......... .......... .......... 503 CATTCCTTAG GAAGGTCAAA TTGATCCCAT ACTTTGTTGG ATTTCACACT CTAATTCTTC 92927 .......... .......... .......... .......... .......... .......... 503 TTTCATACCT TTGAACCATT CTTCCCTTTC AGGTTTTGAT AATGCCTCAA 92977 | || || | ||||| .......... .......... .......... ..ATCTTCAT TGT-TCTCAA 520 hqPGS_C01HBa0163B20.1+_SGN-E345632+ (91372 91848) ******************************************************************************** EST sequence 128 +strand 584 n (File: SGN-E333295+) 1 TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 61 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA 121 TGACAAAGAA GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG 181 CAGCCTGTGT CACCCTGACT AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT 241 CAACAAAGTC AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA 301 CCCTCTCCGC AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG 361 CCACTGTGGC AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA 421 GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG 481 AGGAACTAAN GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAANGATA 541 TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTAT Predicted gene structure (within gDNA segment 107457 to 109250): Exon 1 108057 108640 ( 584 n); cDNA 1 584 ( 584 n); score: 0.991 MATCH C01HBa0163B20.1+ SGN-E333295+ 0.991 584 1.000 C PGS_C01HBa0163B20.1+_SGN-E333295+ (108057 108640) Alignment (genomic DNA sequence = upper lines): TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 108116 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 60 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA 108176 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTTCATA GGGAACTCCC CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA 120 TGACAAAGAA GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG 108236 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAAAGAA GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG 180 CAGCCTGTGT CACCCTGACT AAACATGATT CTGATACTTC ATCAAATGGA GTTGCAACTT 108296 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| CAGCCTGTGT CACCCTGACT AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT 240 CAACAAAGTC AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA 108356 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACAAAGTC AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA 300 CCCTCTCCGC AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG 108416 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCTCTCCGC AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG 360 CCACTGTGGC AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCTA 108476 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | CCACTGTGGC AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA 420 GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG 108536 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG 480 AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA 108596 ||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ||||| |||| AGGAACTAAN GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAANGATA 540 TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTAT 108640 |||||||||| |||||||||| |||||||||| |||||||||| |||| TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTAT 584 hqPGS_C01HBa0163B20.1+_SGN-E333295+ (108057 108640) ******************************************************************************** EST sequence 52 +strand 473 n (File: SGN-E330837+) 1 TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTGACT TACAAGAAGA ACCATAGGGG 61 TTGTTTCATA GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA 121 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 181 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT 241 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 301 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 361 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT 421 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCT Predicted gene structure (within gDNA segment 107457 to 109138): Exon 1 108057 108528 ( 472 n); cDNA 1 473 ( 473 n); score: 0.988 MATCH C01HBa0163B20.1+ SGN-E330837+ 0.988 472 0.998 C PGS_C01HBa0163B20.1+_SGN-E330837+ (108057 108528) Alignment (genomic DNA sequence = upper lines): TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTCACT TACAAGAAGA ACCATAGGGG 108116 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| TAAACACAGC CTTCAATAAA ACCCCTCTGA GTTCTTGACT TACAAGAAGA ACCATAGGGG 60 TTGTTTCATA GGGAACTCCC CCCAT-AAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA 108175 |||||||||| |||||||||| ||||| |||| |||||||||| |||| |||| |||||||||| TTGTTTCATA GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAACAAAAA AACCAAAAAA 120 ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 108235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG 180 GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT 108295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT 240 TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 108355 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG 300 ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 108415 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA 360 GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT 108475 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT 420 AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCT 108528 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCT 473 hqPGS_C01HBa0163B20.1+_SGN-E330837+ (108057 108528) ******************************************************************************** EST sequence 78 +strand 652 n (File: SGN-E332231+) 1 ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 61 TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 121 CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 181 CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACATCATC AAATGGAGTT GCAACTTCAA 241 CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 301 TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 361 CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 421 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 481 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 541 TGGATGACCT CAAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 601 GTTTCACAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TG Predicted gene structure (within gDNA segment 107460 to 109322): Exon 1 108060 108712 ( 653 n); cDNA 1 652 ( 652 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E332231+ 0.994 653 1.002 C PGS_C01HBa0163B20.1+_SGN-E332231+ (108060 108712) Alignment (genomic DNA sequence = upper lines): ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 108119 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 60 TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 108179 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 120 CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 108239 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 180 CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACTTCATC AAATGGAGTT GCAACTTCAA 108299 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACATCATC AAATGGAGTT GCAACTTCAA 240 CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 108359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 300 TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 108419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 360 CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCTAGTG 108479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 420 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 108539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 480 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCTAAGATG AAGGATATAG 108599 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 540 TGGATGACCT CAAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 108659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATGACCT CAAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 600 GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATG 108712 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||| GTTTCA-CAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATG 652 hqPGS_C01HBa0163B20.1+_SGN-E332231+ (108060 108712) ******************************************************************************** EST sequence 3 +strand 558 n (File: SGN-E331580+) 1 ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 61 TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 121 CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 181 CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACATCATC AAATGGAGTT GCAACTTCAA 241 CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 301 TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 361 CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 421 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 481 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 541 TGGATGACCT CAAGTCAT Predicted gene structure (within gDNA segment 107460 to 109227): Exon 1 108060 108617 ( 558 n); cDNA 1 558 ( 558 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E331580+ 0.995 558 1.000 C PGS_C01HBa0163B20.1+_SGN-E331580+ (108060 108617) Alignment (genomic DNA sequence = upper lines): ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 108119 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACAGCCTT CAATAAAACC CCTCTGAGTT CTTCACTTAC AAGAAGAACC ATAGGGGTTG 60 TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 108179 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATAGGG AACTCCCCCC ATAAAAAAAA TCCAAAAAAA TCAAAAAACC AAAAAAATGA 120 CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 108239 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGAAGGT GGTAATTGGT GGAATAGCTT CTGTTCTTGT GGTGGCTTGT GTGGTGGCAG 180 CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACTTCATC AAATGGAGTT GCAACTTCAA 108299 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| CCTGTGTCAC CCTGACTAAA CATGATTCTG ATACATCATC AAATGGAGTT GCAACTTCAA 240 CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 108359 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGTCAGT TGAATCTATG TGTCAACCCA CACCATACAA ACAAACTTGT GAAAAGACCC 300 TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 108419 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCCGCAGC AAAGAATGTG TCCGATCCAA AGGACTACAT CAAGGTTGCA TTCGAAGCCA 360 CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCTAGTG 108479 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CTGTGGCAGA CATCAAGAAT GCCATCAAGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 420 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 108539 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 480 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCTAAGATG AAGGATATAG 108599 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCAAAGATG AAGGATATAG 540 TGGATGACCT CAAGTCAT 108617 |||||||||| |||||||| TGGATGACCT CAAGTCAT 558 hqPGS_C01HBa0163B20.1+_SGN-E331580+ (108060 108617) ******************************************************************************** EST sequence 157 +strand 818 n (File: SGN-E334509+) 1 ACAGCCTTCA ATAAAACCCC TCTGAGTTCT TCACTTACAA GAAGAACCAT AGGGGTTGTT 61 TCATAGGGAA CTCCCCCCAT AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 121 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 181 TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 241 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 301 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 361 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 421 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 481 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 541 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 601 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 661 CGGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 721 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 781 CCGTAAGCTC CTTCAAATTC TGCCCTCAGC CTAATGCT Predicted gene structure (within gDNA segment 107462 to 109659): Exon 1 108062 108880 ( 819 n); cDNA 1 818 ( 818 n); score: 0.981 MATCH C01HBa0163B20.1+ SGN-E334509+ 0.981 819 1.001 C PGS_C01HBa0163B20.1+_SGN-E334509+ (108062 108880) Alignment (genomic DNA sequence = upper lines): ACAGCCTTCA ATAAAACCCC TCTGAGTTCT TCACTTACAA GAAGAACCAT AGGGGTTGTT 108121 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCCTTCA ATAAAACCCC TCTGAGTTCT TCACTTACAA GAAGAACCAT AGGGGTTGTT 60 TCATAGGGAA CTCCCCCCAT AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 108181 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATAGGGAA CTCCCCCCAT AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 120 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 108241 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 180 TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC AACTTCAACA 108301 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAT ACATCATCAA ATGGAGTTGC AACTTCAACA 240 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 108361 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 300 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 108421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 360 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 108481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 420 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 108541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 480 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 108601 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CAAAGATGAA GGATATAGTG 540 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 108661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 600 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 108721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGTACCACC 660 C-GGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAGC TTCGGTGAAA TGATCACACA 108780 | |||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| CGGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 720 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCCAGTAA 108840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 780 TCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT 108880 ||||||||| ||||||| || ||||| | | |||||||||| CCGTAAGCTC CTTCAAA-TT CTGCC-CTCA GCCTAATGCT 818 hqPGS_C01HBa0163B20.1+_SGN-E334509+ (108062 108880) ******************************************************************************** EST sequence 154 +strand 816 n (File: SGN-E334504+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 661 GGGAGCTGAG TAGCAATGCT CTTTTCATGG TCAACAACTT TGGTGAAATG ATCACACAAA 721 ACACAGGCCT TACCCGCAAA TTGNTATCAA ACAGTGACTC ATTTGTCGAA GCTAGTAACC 781 GTAAGCTCCT TCAAATTTCT GCCTCAAGCC TAATGC Predicted gene structure (within gDNA segment 107463 to 109587): Exon 1 108063 108879 ( 817 n); cDNA 1 816 ( 816 n); score: 0.985 MATCH C01HBa0163B20.1+ SGN-E334504+ 0.985 817 1.001 C PGS_C01HBa0163B20.1+_SGN-E334504+ (108063 108879) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 108122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 108182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 120 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 108242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 180 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 108302 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 240 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 108362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 300 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 108422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 360 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 108482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 420 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 108542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 480 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 108602 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 540 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 108662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 600 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 108722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||| | TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 660 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CGGTGAAATG ATCACACAAA 108782 |||||||||| |||||||||| |||| ||||| |||||| ||| ||||||||| |||||||||| GGGAGCTGAG TAGCAATGCT CTTTTCATGG TCAACAACTT TGGTGAAATG ATCACACAAA 720 ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC ATTTGTCGAA GCCAGTAATC 108842 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| || ||||| | ACACAGGCCT TACCCGCAAA TTGNTATCAA ACAGTGACTC ATTTGTCGAA GCTAGTAACC 780 GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGC 108879 |||||||||| |||||||||| |||| ||||| ||||||| GTAAGCTCCT TCAAATTTCT GCCT-CAAGC CTAATGC 816 hqPGS_C01HBa0163B20.1+_SGN-E334504+ (108063 108879) ******************************************************************************** EST sequence 1 +strand 793 n (File: SGN-E547512+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 121 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 181 TGTGTCACCC TGACTAAACA TGATTCTGAC CCTTCATCAA ATGGAGTTGC AACTTCAACA 241 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 301 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 361 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 421 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 481 CTAAGGGGCT CTGTCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 541 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 601 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACC 661 CGGGAGCTAA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 721 AACACAGGCC TTACCCGCAA ATTGNTATCA AACAGTGACT CATTTGTCGA AGCCAGTAAC 781 CGTAAGCTCC TTC Predicted gene structure (within gDNA segment 107463 to 109590): Exon 1 108063 108854 ( 792 n); cDNA 1 793 ( 793 n); score: 0.987 MATCH C01HBa0163B20.1+ SGN-E547512+ 0.987 792 0.999 C PGS_C01HBa0163B20.1+_SGN-E547512+ (108063 108854) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 108122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCAT- AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 108181 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCATA AAAAAAAATC CAAAAAAATC AAAAAACCAA AAAAATGACA 120 AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 108241 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT GGTGGCAGCC 180 TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC AACTTCAACA 108301 |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| |||||||||| TGTGTCACCC TGACTAAACA TGATTCTGAC CCTTCATCAA ATGGAGTTGC AACTTCAACA 240 AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 108361 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA AAAGACCCTC 300 TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 108421 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 360 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 108481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCCAGTGAT 420 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 108541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 480 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 108601 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGGGGCT CTGTCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 540 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 108661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 600 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 108721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACC 660 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 108781 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGGAGCTAA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 720 AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA AGCCAGTAAT 108841 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| ||||||||| AACACAGGCC TTACCCGCAA ATTGNTATCA AACAGTGACT CATTTGTCGA AGCCAGTAAC 780 CGTAAGCTCC TTC 108854 |||||||||| ||| CGTAAGCTCC TTC 793 hqPGS_C01HBa0163B20.1+_SGN-E547512+ (108063 108854) ******************************************************************************** EST sequence 169 +strand 766 n (File: SGN-E334024+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CNGTGAAATG ATCACACAAA 721 ACACAGGCCT TACCCGCAAT TGTTATCAAA CAGTGACTCA TTTGTC Predicted gene structure (within gDNA segment 107463 to 109439): Exon 1 108063 108829 ( 767 n); cDNA 1 766 ( 766 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E334024+ 0.995 767 1.001 C PGS_C01HBa0163B20.1+_SGN-E334024+ (108063 108829) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 108122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 108182 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 120 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 108242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 180 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 108302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 240 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 108362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 300 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 108422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 360 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 108482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 420 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 108542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 480 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 108602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 540 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 108662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 600 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 108722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 660 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CGGTGAAATG ATCACACAAA 108782 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CNGTGAAATG ATCACACAAA 720 ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC ATTTGTC 108829 |||||||||| ||||||| || |||||||||| |||||||||| ||||||| ACACAGGCCT TACCCGC-AA TTGTTATCAA ACAGTGACTC ATTTGTC 766 hqPGS_C01HBa0163B20.1+_SGN-E334024+ (108063 108829) ******************************************************************************** EST sequence 55 +strand 691 n (File: SGN-E332090+) 1 CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG T Predicted gene structure (within gDNA segment 107463 to 109363): Exon 1 108063 108753 ( 691 n); cDNA 1 691 ( 691 n); score: 0.993 MATCH C01HBa0163B20.1+ SGN-E332090+ 0.993 691 1.000 C PGS_C01HBa0163B20.1+_SGN-E332090+ (108063 108753) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 108122 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 108182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 120 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 108242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 180 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 108302 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 240 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 108362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 300 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 108422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 360 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 108482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 420 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 108542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 480 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 108602 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG 540 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 108662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 600 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 108722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||| | TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCC 660 GGGAGCTGAG TAGCAATGCT CTTTCCATGG T 108753 |||||||||| |||||||||| |||||||||| | GGGAGCTGAG TAGCAATGCT CTTTCCATGG T 691 hqPGS_C01HBa0163B20.1+_SGN-E332090+ (108063 108753) ******************************************************************************** EST sequence 6 +strand 466 n (File: SGN-E331435+) 1 CAGCCTTCAA TAAAACCCCT CTGAGGTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 61 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCT Predicted gene structure (within gDNA segment 107463 to 109138): Exon 1 108063 108528 ( 466 n); cDNA 1 466 ( 466 n); score: 0.994 MATCH C01HBa0163B20.1+ SGN-E331435+ 0.994 466 1.000 C PGS_C01HBa0163B20.1+_SGN-E331435+ (108063 108528) Alignment (genomic DNA sequence = upper lines): CAGCCTTCAA TAAAACCCCT CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 108122 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CAGCCTTCAA TAAAACCCCT CTGAGGTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT 60 CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 108182 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAGGGAAC TCCCCCCATA AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 120 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 108242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 180 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 108302 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA 240 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 108362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 300 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 108422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 360 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 108482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC 420 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCT 108528 |||||||||| |||||||||| |||||||||| |||||||||| |||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCT 466 hqPGS_C01HBa0163B20.1+_SGN-E331435+ (108063 108528) ******************************************************************************** EST sequence 95 +strand 746 n (File: SGN-E332545+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 661 GGAGCTGAGT AGCAATGCTC TTTTCATGGT CAANCACTTT GGTGAAATGA TCACACAAAA 721 CACAGGCCTT ACCCGCAAAT TGTTAT Predicted gene structure (within gDNA segment 107464 to 109419): Exon 1 108064 108809 ( 746 n); cDNA 1 746 ( 746 n); score: 0.987 MATCH C01HBa0163B20.1+ SGN-E332545+ 0.987 746 1.000 C PGS_C01HBa0163B20.1+_SGN-E332545+ (108064 108809) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 108123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 108183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 120 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 108243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 180 TGTCACCCTG ACTAAACATG ATTCTGATAC TTCATCAAAT GGAGTTGCAA CTTCAACAAA 108303 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 240 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 108363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 300 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 108423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 360 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CTAGTGATCC 108483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 420 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 108543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 480 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCT AAGATGAAGG ATATAGTGGA 108603 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 540 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 108663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 600 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GCACCACTCG 108723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||| || CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 660 GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAACAGCTTC GGTGAAATGA TCACACAAAA 108783 |||||||||| |||||||||| ||| |||||| ||| ||| |||||||||| |||||||||| GGAGCTGAGT AGCAATGCTC TTTTCATGGT CAANCACTTT GGTGAAATGA TCACACAAAA 720 CACAGGCCTT ACCCGCAAAT TGTTAT 108809 |||||||||| |||||||||| |||||| CACAGGCCTT ACCCGCAAAT TGTTAT 746 hqPGS_C01HBa0163B20.1+_SGN-E332545+ (108064 108809) ******************************************************************************** EST sequence 67 +strand 742 n (File: SGN-E331950+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 121 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 181 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 241 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 301 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 361 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 421 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 481 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 541 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 601 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CCGTGAAATG ATCACACAAA 721 ACACAGGCCT TACCCGCAAA TT Predicted gene structure (within gDNA segment 107464 to 109414): Exon 1 108064 108804 ( 741 n); cDNA 1 742 ( 742 n); score: 0.993 MATCH C01HBa0163B20.1+ SGN-E331950+ 0.993 741 0.999 C PGS_C01HBa0163B20.1+_SGN-E331950+ (108064 108804) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 108123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCAT-A AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA 108182 |||||||||| |||||||| | |||||||||| ||||||| | |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAAATCC AAAAAAACAA AAAAACCAAA AAAATGACAA 120 AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 108242 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGGTGGT AATTGGTGGA ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT 180 GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 108302 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCACCCT GACTAAACAT GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA 240 AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 108362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAGTTGA ATCTATGTGT CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT 300 CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 108422 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCAGCAAA GAATGTGTCC GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG 360 TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 108482 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCAGACAT CAAGAATGCC ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC 420 CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 108542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTACACCAA AGACGCTCTC CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC 480 TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 108602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGGGGCTC TATCGCTAGG ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG 540 ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 108662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT 600 TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 108722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC 660 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CGGTGAAATG ATCACACAAA 108782 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGCTT CCGTGAAATG ATCACACAAA 720 ACACAGGCCT TACCCGCAAA TT 108804 |||||||||| |||||||||| || ACACAGGCCT TACCCGCAAA TT 742 hqPGS_C01HBa0163B20.1+_SGN-E331950+ (108064 108804) ******************************************************************************** EST sequence 134 +strand 715 n (File: SGN-E334152+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 661 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT TGGGTGAAAT GATCA Predicted gene structure (within gDNA segment 107464 to 109558): Exon 1 108064 108776 ( 713 n); cDNA 1 715 ( 715 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E334152+ 0.983 713 0.997 C PGS_C01HBa0163B20.1+_SGN-E334152+ (108064 108776) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 108123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 108183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 120 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 108243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 180 TGTCACCCTG ACTAAACATG ATTCTGATAC TTCATCAAAT GGAGTTGCAA CTTCAACAAA 108303 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 240 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 108363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 300 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 108423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 360 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CTAGTGATCC 108483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 420 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 108543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 480 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCT AAGATGAAGG ATATAGTGGA 108603 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 540 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 108663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 600 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GCACCACTC- 108722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||| | CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 660 GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAGC-T TCGGTGAAAT GATCA 108776 |||||||||| |||||||||| |||||||||| |||||| | | | |||||||| ||||| GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT TGGGTGAAAT GATCA 715 hqPGS_C01HBa0163B20.1+_SGN-E334152+ (108064 108776) ******************************************************************************** EST sequence 160 +strand 712 n (File: SGN-E334584+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACACCCGG 661 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AAACACTTTG GTGAAATGAT CA Predicted gene structure (within gDNA segment 107464 to 109566): Exon 1 108064 108776 ( 713 n); cDNA 1 712 ( 712 n); score: 0.986 MATCH C01HBa0163B20.1+ SGN-E334584+ 0.986 713 1.001 C PGS_C01HBa0163B20.1+_SGN-E334584+ (108064 108776) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 108123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 108183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 120 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 108243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 180 TGTCACCCTG ACTAAACATG ATTCTGATAC TTCATCAAAT GGAGTTGCAA CTTCAACAAA 108303 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 240 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 108363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 300 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 108423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 360 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CTAGTGATCC 108483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 420 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 108543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 480 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCT AAGATGAAGG ATATAGTGGA 108603 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 540 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 108663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 600 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GCACCACTCG 108723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | | ||| || CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTA-CACCCG 659 GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAACAGCTTC GGTGAAATGA TCA 108776 |||||||||| |||||||||| |||||||||| ||| ||| |||||||||| ||| GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAAACACTTT GGTGAAATGA TCA 712 hqPGS_C01HBa0163B20.1+_SGN-E334584+ (108064 108776) ******************************************************************************** EST sequence 64 +strand 677 n (File: SGN-E332023+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 481 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 541 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 601 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 661 GGAGCTGAGT AGCAATG Predicted gene structure (within gDNA segment 107464 to 109350): Exon 1 108064 108740 ( 677 n); cDNA 1 677 ( 677 n); score: 0.993 MATCH C01HBa0163B20.1+ SGN-E332023+ 0.993 677 1.000 C PGS_C01HBa0163B20.1+_SGN-E332023+ (108064 108740) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 108123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 108183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 120 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 108243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 180 TGTCACCCTG ACTAAACATG ATTCTGATAC TTCATCAAAT GGAGTTGCAA CTTCAACAAA 108303 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 240 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 108363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 300 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 108423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 360 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CTAGTGATCC 108483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 420 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 108543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCTAGCCG TTGAGGAACT 480 AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCT AAGATGAAGG ATATAGTGGA 108603 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AAGGGGCTCT ATCGCTAGGA TTGAGAACTT TGATTTCTCA AAGATGAAGG ATATAGTGGA 540 TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 108663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA GAGACTTGTT TAGATGGTTT 600 CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GCACCACTCG 108723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | ||||| || CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG AAGCTAATGA GTACCACCCG 660 GGAGCTGAGT AGCAATG 108740 |||||||||| ||||||| GGAGCTGAGT AGCAATG 677 hqPGS_C01HBa0163B20.1+_SGN-E332023+ (108064 108740) ******************************************************************************** EST sequence 92 +strand 465 n (File: SGN-E332788+) 1 AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 61 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 121 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 181 TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 241 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 301 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 361 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 421 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCT Predicted gene structure (within gDNA segment 107464 to 109138): Exon 1 108064 108528 ( 465 n); cDNA 1 465 ( 465 n); score: 0.996 MATCH C01HBa0163B20.1+ SGN-E332788+ 0.996 465 1.000 C PGS_C01HBa0163B20.1+_SGN-E332788+ (108064 108528) Alignment (genomic DNA sequence = upper lines): AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 108123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCTTCAAT AAAACCCCTC TGAGTTCTTC ACTTACAAGA AGAACCATAG GGGTTGTTTC 60 ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 108183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGGGAACT CCCCCCATAA AAAAAATCCA AAAAAATCAA AAAACCAAAA AAATGACAAA 120 GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 108243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGTGGTA ATTGGTGGAA TAGCTTCTGT TCTTGTGGTG GCTTGTGTGG TGGCAGCCTG 180 TGTCACCCTG ACTAAACATG ATTCTGATAC TTCATCAAAT GGAGTTGCAA CTTCAACAAA 108303 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGTCACCCTG ACTAAACATG ATTCTGATAC ATCATCAAAT GGAGTTGCAA CTTCAACAAA 240 GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 108363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCAGTTGAA TCTATGTGTC AACCCACACC ATACAAACAA ACTTGTGAAA AGACCCTCTC 300 CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 108423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCAGCAAAG AATGTGTCCG ATCCAAAGGA CTACATCAAG GTTGCATTCG AAGCCACTGT 360 GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CTAGTGATCC 108483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GGCAGACATC AAGAATGCCA TCAAGAACAC TGAGCCAGTT AAGAAAGCTG CCAGTGATCC 420 TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCT 108528 |||||||||| |||||||||| |||||||||| |||||||||| ||||| TTACACCAAA GACGCTCTCC TTGCTTGTGA AGAGGTGTTT GATCT 465 hqPGS_C01HBa0163B20.1+_SGN-E332788+ (108064 108528) ******************************************************************************** EST sequence 187 +strand 666 n (File: SGN-E330458+) 1 GCCTTCAATA AAACCCCTCT GAGTTCTTCA CTTACAAGAA GAACCATAGG GGTTGTTTCA 61 TAGGGAACTC CCCCCATAAA AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG 121 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 181 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 241 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 301 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 361 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 421 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 481 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 541 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 601 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 661 GAGCTG Predicted gene structure (within gDNA segment 107465 to 109484): Exon 1 108065 108730 ( 666 n); cDNA 1 666 ( 666 n); score: 0.992 MATCH C01HBa0163B20.1+ SGN-E330458+ 0.992 666 1.000 C PGS_C01HBa0163B20.1+_SGN-E330458+ (108065 108730) Alignment (genomic DNA sequence = upper lines): GCCTTCAATA AAACCCCTCT GAGTTCTTCA CTTACAAGAA GAACCATAGG GGTTGTTTCA 108124 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTTCAATA AAACCCCTCT GAGTTCTTCA CTTACAAGAA GAACCATAGG GGTTGTTTCA 60 TAGGGAACTC CCCCCATAAA AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG 108184 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAGGGAACTC CCCCCATAAA AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG 120 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 108244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 180 GTCACCCTGA CTAAACATGA TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG 108304 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 240 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 108364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 300 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 108424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 360 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT 108484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 420 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 108544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 480 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 108604 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 540 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 108664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 600 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG 108724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 660 GAGCTG 108730 |||||| GAGCTG 666 hqPGS_C01HBa0163B20.1+_SGN-E330458+ (108065 108730) ******************************************************************************** EST sequence 195 +strand 640 n (File: SGN-E330049+) 1 CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 61 AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 121 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 181 TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 241 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 301 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 361 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 421 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 481 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 541 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 601 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA Predicted gene structure (within gDNA segment 107466 to 109315): Exon 1 108066 108705 ( 640 n); cDNA 1 640 ( 640 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E330049+ 0.995 640 1.000 C PGS_C01HBa0163B20.1+_SGN-E330049+ (108066 108705) Alignment (genomic DNA sequence = upper lines): CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 108125 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 60 AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 108185 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 120 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 108245 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 180 TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT TCAACAAAGT 108305 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 240 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 108365 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 300 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 108425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 360 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT AGTGATCCTT 108485 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 420 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 108545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 480 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 108605 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 540 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 108665 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 600 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA 108705 |||||||||| |||||||||| |||||||||| |||||||||| CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA 640 hqPGS_C01HBa0163B20.1+_SGN-E330049+ (108066 108705) ******************************************************************************** EST sequence 191 +strand 576 n (File: SGN-E330071+) 1 CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 61 AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 121 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 181 TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 241 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 301 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 361 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 421 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 481 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 541 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATG Predicted gene structure (within gDNA segment 107466 to 109251): Exon 1 108066 108641 ( 576 n); cDNA 1 576 ( 576 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E330071+ 0.995 576 1.000 C PGS_C01HBa0163B20.1+_SGN-E330071+ (108066 108641) Alignment (genomic DNA sequence = upper lines): CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 108125 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTCAATAA AACCCCTCTG AGTTCTTCAC TTACAAGAAG AACCATAGGG GTTGTTTCAT 60 AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 108185 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 120 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 108245 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 180 TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT TCAACAAAGT 108305 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| TCACCCTGAC TAAACATGAT TCTGATACAT CATCAAATGG AGTTGCAACT TCAACAAAGT 240 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 108365 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 300 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 108425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 360 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT AGTGATCCTT 108485 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 420 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 108545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 480 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 108605 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCAAA GATGAAGGAT ATAGTGGATG 540 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATG 108641 |||||||||| |||||||||| |||||||||| |||||| ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATG 576 hqPGS_C01HBa0163B20.1+_SGN-E330071+ (108066 108641) ******************************************************************************** EST sequence 41 +strand 875 n (File: SGN-E378573+) 1 TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGNG TTGTTTCATA 61 GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 121 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 181 TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT TCAACAAAGT 241 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 301 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 361 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 421 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 481 GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 541 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 601 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACCCGGG 661 AGCTAAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 721 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAACCGTA 781 AGCTCCTTCA ATTTCTGCCT CCAGNCTAAT GCTGTGGGTT CTGCCAGTGG AGGCGGACAA 841 TANCAGACCA TTCAGGAAGC ACTTTCAGCT GTCCC Predicted gene structure (within gDNA segment 107468 to 109651): Exon 1 108068 108942 ( 875 n); cDNA 1 875 ( 875 n); score: 0.977 MATCH C01HBa0163B20.1+ SGN-E378573+ 0.977 875 1.000 C PGS_C01HBa0163B20.1+_SGN-E378573+ (108068 108942) Alignment (genomic DNA sequence = upper lines): TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGG-G TTGTTTCATA 108126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGNG TTGTTTCATA 60 GGGAACTCCC CCCATAAA-A AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 108185 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| GGGAACTCCC CCCATAAAAA AAAATCCAAA AAAATCAAAA AACCAAAAAA ATGACAAAGA 120 AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 108245 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTGGTAAT TGGTGGAATA GCTTCTGTTC TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG 180 TCACCCTGAC TAAACATGAT TCTGATACTT CATCAAATGG AGTTGCAACT TCAACAAAGT 108305 |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||| |||||||||| TCACCCTGAC TAAACATGAT TCTGACCCTT CATCAAATGG AGTTGCAACT TCAACAAAGT 240 CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 108365 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTGAATC TATGTGTCAA CCCACACCAT ACAAACAAAC TTGTGAAAAG ACCCTCTCCG 300 CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 108425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCAAAGAA TGTGTCCGAT CCAAAGGACT ACATCAAGGT TGCATTCGAA GCCACTGTGG 360 CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCT AGTGATCCTT 108485 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGACATCAA GAATGCCATC AAGAACACTG AGCCAGTTAA GAAAGCTGCC AGTGATCCTT 420 ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 108545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCAAAGA CGCTCTCCTT GCTTGTGAAG AGGTGTTTGA TCTAGCCGTT GAGGAACTAA 480 GGGGCTCTAT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 108605 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGCTCTGT CGCTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 540 ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 108665 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 600 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACTCGGG 108725 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACCCGGG 660 AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 108785 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTAAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 720 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAATCGTA 108845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAACCGTA 780 AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT GGAGGCGGAC 108905 ||||||||| |||||||||| ||| || ||| ||||||||| |||||||||| |||||||||| AGCTCCTTC- AATTTCTGCC TCC-AGNCTA ATGCTGTGGG TTCTGCCAGT GGAGGCGGAC 838 AATACAAGAC CATTCAGGAA GCACTTCAAG CTGTCCC 108942 |||| |||| |||||||||| |||||| || ||||||| AATANCAGAC CATTCAGGAA GCACTTTCAG CTGTCCC 875 hqPGS_C01HBa0163B20.1+_SGN-E378573+ (108068 108942) ******************************************************************************** EST sequence 166 +strand 823 n (File: SGN-E334554+) 1 TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 61 GGAACTCCCC CCATAAAAAA AATCCAAAAA AATCAAAAAA CCAAAAAAAT GACAAAGAAG 121 GTGGTAATTG GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC 181 ACCCTGACTA AACATGATTC TGATACATCA TCAAATGGAG TTGCAACTTC AACAAAGTCA 241 GTTGAATCTA TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA 301 GCAAAGAATG TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA 361 GACATCAAGA ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC 421 ACCAAAGACG CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG 481 GGCTCTATCG CTAGGATTGA GAACTTTGAT TTCTCAAAGA TGAAGGATAT AGTGGATGAC 541 CTCAAGTCAT GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC 601 AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC CACCCGGGAA 661 GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT GAAATGATCA CACAAAACAC 721 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 781 GCTCCTTCAA ATTTCTGCCT CAAGCCTAAT GCTGTGGTTT CTA Predicted gene structure (within gDNA segment 107468 to 109509): Exon 1 108068 108889 ( 822 n); cDNA 1 822 ( 822 n); score: 0.985 MATCH C01HBa0163B20.1+ SGN-E334554+ 0.985 822 0.999 C PGS_C01HBa0163B20.1+_SGN-E334554+ (108068 108889) Alignment (genomic DNA sequence = upper lines): TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 108127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 60 GGAACTCCCC CCATAAAAAA AATCCAAAAA AATCAAAAAA CCAAAAAAAT GACAAAGAAG 108187 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACTCCCC CCATAAAAAA AATCCAAAAA AATCAAAAAA CCAAAAAAAT GACAAAGAAG 120 GTGGTAATTG GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC 108247 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTAATTG GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC 180 ACCCTGACTA AACATGATTC TGATACTTCA TCAAATGGAG TTGCAACTTC AACAAAGTCA 108307 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ACCCTGACTA AACATGATTC TGATACATCA TCAAATGGAG TTGCAACTTC AACAAAGTCA 240 GTTGAATCTA TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA 108367 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGAATCTA TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA 300 GCAAAGAATG TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA 108427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAAGAATG TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA 360 GACATCAAGA ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCTAG TGATCCTTAC 108487 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| GACATCAAGA ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC 420 ACCAAAGACG CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG 108547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAAGACG CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG 480 GGCTCTATCG CTAGGATTGA GAACTTTGAT TTCTCTAAGA TGAAGGATAT AGTGGATGAC 108607 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| GGCTCTATCG CTAGGATTGA GAACTTTGAT TTCTCAAAGA TGAAGGATAT AGTGGATGAC 540 CTCAAGTCAT GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC 108667 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCAAGTCAT GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC 600 AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC CACTCGGG-A 108726 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ||| |||| | AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC CACCCGGGAA 660 GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT GAAATGATCA CACAAAACAC 108786 |||||||||| |||||||||| |||||||||| || ||| ||| |||||||||| |||||||||| GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAACTTTGGT GAAATGATCA CACAAAACAC 720 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCCA GTAATCGTAA 108846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 780 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCT 108889 |||||||||| |||||||||| ||||||||| |||||||||| ||| GCTCCTTCAA ATTTCTGCCT -CAAGCCTAA TGCTGTGGTT TCT 822 hqPGS_C01HBa0163B20.1+_SGN-E334554+ (108068 108889) ******************************************************************************** EST sequence 43 +strand 653 n (File: SGN-E374064+) 1 TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 61 GGAACTCCCC CCATAAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA 121 GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 181 CACCCTGACT AAACATGATT CTGACCCTTC ATCAAATGGA GTTGCAACTT CAACAAAGTC 241 AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 301 AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 361 AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 421 CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 481 GGGCTCTGTC GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA TAGTGGATGA 541 CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 601 CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGCA CCA Predicted gene structure (within gDNA segment 107468 to 109329): Exon 1 108068 108719 ( 652 n); cDNA 1 653 ( 653 n); score: 0.990 MATCH C01HBa0163B20.1+ SGN-E374064+ 0.990 652 0.998 C PGS_C01HBa0163B20.1+_SGN-E374064+ (108068 108719) Alignment (genomic DNA sequence = upper lines): TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 108127 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCAATAAAA CCCCTCTGAG TTCTTCACTT ACAAGAAGAA CCATAGGGGT TGTTTCATAG 60 GGAACTCCCC CCAT-AAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA 108186 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACTCCCC CCATAAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA 120 GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 108246 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGTAATT GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT 180 CACCCTGACT AAACATGATT CTGATACTTC ATCAAATGGA GTTGCAACTT CAACAAAGTC 108306 |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| CACCCTGACT AAACATGATT CTGACCCTTC ATCAAATGGA GTTGCAACTT CAACAAAGTC 240 AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 108366 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTGAATCT ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC 300 AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 108426 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAAAGAAT GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC 360 AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCTA GTGATCCTTA 108486 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| AGACATCAAG AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA 420 CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 108546 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG 480 GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA TAGTGGATGA 108606 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCTCTGTC GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA TAGTGGATGA 540 CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 108666 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC 600 CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGCA CCA 108719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG CTAATGAGCA CCA 653 hqPGS_C01HBa0163B20.1+_SGN-E374064+ (108068 108719) ******************************************************************************** EST sequence 131 +strand 702 n (File: SGN-E333363+) 1 CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT CATAGGGAAC TCCCCCCATA 61 AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA AGAAGGTGGT AATTGGTGGA 121 ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT GTGTCACCCT GACTAAACAT 181 GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA AGTCAGTTGA ATCTATGTGT 241 CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT CCGCAGCAAA GAATGTGTCC 301 GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG TGGCAGACAT CAAGAATGCC 361 ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC CTTACACCAA AGACGCTCTC 421 CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC TAAGGGGCTC TATCGCTAGG 481 ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT 541 AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT 601 GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCG GGGAGCTGAG TAGCAATGGC 661 TCTTCCATGG TCANCAACTT TGGTGAAATG ATCACACAAA AC Predicted gene structure (within gDNA segment 107483 to 109790): Exon 1 108083 108784 ( 702 n); cDNA 1 702 ( 702 n); score: 0.981 MATCH C01HBa0163B20.1+ SGN-E333363+ 0.981 702 1.000 C PGS_C01HBa0163B20.1+_SGN-E333363+ (108083 108784) Alignment (genomic DNA sequence = upper lines): CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT CATAGGGAAC TCCCCCCATA 108142 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAGTTCTT CACTTACAAG AAGAACCATA GGGGTTGTTT CATAGGGAAC TCCCCCCATA 60 AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA AGAAGGTGGT AATTGGTGGA 108202 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAAATCC AAAAAAATCA AAAAACCAAA AAAATGACAA AGAAGGTGGT AATTGGTGGA 120 ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT GTGTCACCCT GACTAAACAT 108262 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCTTCTG TTCTTGTGGT GGCTTGTGTG GTGGCAGCCT GTGTCACCCT GACTAAACAT 180 GATTCTGATA CTTCATCAAA TGGAGTTGCA ACTTCAACAA AGTCAGTTGA ATCTATGTGT 108322 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTCTGATA CATCATCAAA TGGAGTTGCA ACTTCAACAA AGTCAGTTGA ATCTATGTGT 240 CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT CCGCAGCAAA GAATGTGTCC 108382 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAACCCACAC CATACAAACA AACTTGTGAA AAGACCCTCT CCGCAGCAAA GAATGTGTCC 300 GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG TGGCAGACAT CAAGAATGCC 108442 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCAAAGG ACTACATCAA GGTTGCATTC GAAGCCACTG TGGCAGACAT CAAGAATGCC 360 ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCTAGTGATC CTTACACCAA AGACGCTCTC 108502 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| ATCAAGAACA CTGAGCCAGT TAAGAAAGCT GCCAGTGATC CTTACACCAA AGACGCTCTC 420 CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC TAAGGGGCTC TATCGCTAGG 108562 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGCTTGTG AAGAGGTGTT TGATCTAGCC GTTGAGGAAC TAAGGGGCTC TATCGCTAGG 480 ATTGAGAACT TTGATTTCTC TAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT 108622 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ATTGAGAACT TTGATTTCTC AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT 540 AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT 108682 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCGCTGTCG TTGCTTATGA AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT 600 GCAACCCGTG ACGAAATGAT GAAGCTAATG AGCACCACTC GGGAGCTGAG TAGCAATGCT 108742 |||||||||| |||||||||| |||||||||| || ||||| |||||||||| |||||||| GCAACCCGTG ACGAAATGAT GAAGCTAATG AGTACCACCG GGGAGCTGAG TAGCAATGGC 660 CTTTCCATGG TCAACAGCTT CGGTGAAATG ATCACACAAA AC 108784 |||||||| ||| || ||| ||||||||| |||||||||| || TCTTCCATGG TCANCAACTT TGGTGAAATG ATCACACAAA AC 702 hqPGS_C01HBa0163B20.1+_SGN-E333363+ (108083 108784) ******************************************************************************** EST sequence 88 +strand 550 n (File: SGN-E332731+) 1 TTCACTTACA AGAAGAACCA TACGGGTTGT TTCATACGGA ACTCCCCCCA TAATAAAAAT 61 CCAAAAAAAT CCAAAAACCA AAAAAATGAC AAAGAAGGTG GTAATTGGCG GAATAGCTTC 121 TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC CTGTGTCACC CTGACTAAAC ATGATTCTGA 181 TACATCATCA AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC 241 ACCATACAAA CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA 301 GGACTACATC AATGTTGCAT TCCAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA 361 CACTGAGCCA GTTAAGAAAG CTGCCAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG 421 TGAAGAGGTG TTTGATCTAC CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 481 CTTTGATTTC TCAAGATGAA GGATATAGTG GATGACCTCG AGTCATGGCT TAGCGCTGTC 541 GTTGCTTATG Predicted gene structure (within gDNA segment 107491 to 109251): Exon 1 108091 108641 ( 551 n); cDNA 1 550 ( 550 n); score: 0.978 MATCH C01HBa0163B20.1+ SGN-E332731+ 0.978 551 1.002 C PGS_C01HBa0163B20.1+_SGN-E332731+ (108091 108641) Alignment (genomic DNA sequence = upper lines): TTCACTTACA AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAT 108150 |||||||||| |||||||||| || ||||||| |||||| ||| |||||||||| ||| |||||| TTCACTTACA AGAAGAACCA TACGGGTTGT TTCATACGGA ACTCCCCCCA TAATAAAAAT 60 CCAAAAAAAT CAAAAAACCA AAAAAATGAC AAAGAAGGTG GTAATTGGTG GAATAGCTTC 108210 |||||||||| | |||||||| |||||||||| |||||||||| |||||||| | |||||||||| CCAAAAAAAT CCAAAAACCA AAAAAATGAC AAAGAAGGTG GTAATTGGCG GAATAGCTTC 120 TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC CTGTGTCACC CTGACTAAAC ATGATTCTGA 108270 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC CTGTGTCACC CTGACTAAAC ATGATTCTGA 180 TACTTCATCA AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC 108330 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACATCATCA AATGGAGTTG CAACTTCAAC AAAGTCAGTT GAATCTATGT GTCAACCCAC 240 ACCATACAAA CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA 108390 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATACAAA CAAACTTGTG AAAAGACCCT CTCCGCAGCA AAGAATGTGT CCGATCCAAA 300 GGACTACATC AAGGTTGCAT TCGAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA 108450 |||||||||| || ||||||| || ||||||| |||||||||| |||||||||| |||||||||| GGACTACATC AATGTTGCAT TCCAAGCCAC TGTGGCAGAC ATCAAGAATG CCATCAAGAA 360 CACTGAGCCA GTTAAGAAAG CTGCTAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG 108510 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CACTGAGCCA GTTAAGAAAG CTGCCAGTGA TCCTTACACC AAAGACGCTC TCCTTGCTTG 420 TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 108570 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAGGTG TTTGATCTAC CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 480 CTTTGATTTC TCTAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 108630 |||||||||| || ||||||| |||||||||| |||||||||| ||||||||| |||||||||| CTTTGATTTC TC-AAGATGA AGGATATAGT GGATGACCTC GAGTCATGGC TTAGCGCTGT 539 CGTTGCTTAT G 108641 |||||||||| | CGTTGCTTAT G 550 hqPGS_C01HBa0163B20.1+_SGN-E332731+ (108091 108641) ******************************************************************************** EST sequence 164 +strand 653 n (File: SGN-E334715+) 1 AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAA TCCAAAAAAA 61 CAAAAAAAAC CAAAAAAATG ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG 121 TGGTGGCTTG TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT 181 CAAATGGAGT TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA 241 AACAAACTTG TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA 301 TCAAGGTTGC ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC 361 CAGTTAAGAA AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG 421 TGTTTGATCT AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT 481 TCTCTAAGAT GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT 541 ATGAAGAGAC TTGTTTAGAT GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA 601 TGATGAAGCT AATGAGCACC ACTCGGGAGC TGAGTAGCAA TGCTCTTTCC ATG Predicted gene structure (within gDNA segment 107501 to 109361): Exon 1 108101 108751 ( 651 n); cDNA 1 653 ( 653 n); score: 0.989 MATCH C01HBa0163B20.1+ SGN-E334715+ 0.989 651 0.997 C PGS_C01HBa0163B20.1+_SGN-E334715+ (108101 108751) Alignment (genomic DNA sequence = upper lines): AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA T-AAAAAAAA TCCAAAAAAA 108159 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| AGAAGAACCA TAGGGGTTGT TTCATAGGGA ACTCCCCCCA TAAAAAAAAA TCCAAAAAAA 60 -TCAAAAAAC CAAAAAAATG ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG 108218 ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAAAAAAC CAAAAAAATG ACAAAGAAGG TGGTAATTGG TGGAATAGCT TCTGTTCTTG 120 TGGTGGCTTG TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT 108278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTGGCTTG TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT 180 CAAATGGAGT TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA 108338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATGGAGT TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA 240 AACAAACTTG TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA 108398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAAACTTG TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA 300 TCAAGGTTGC ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC 108458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGTTGC ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC 360 CAGTTAAGAA AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG 108518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTTAAGAA AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG 420 TGTTTGATCT AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT 108578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTTGATCT AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT 480 TCTCTAAGAT GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT 108638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTCTAAGAT GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT 540 ATGAAGAGAC TTGTTTAGAT GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA 108698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGAGAC TTGTTTAGAT GGTTTCACCA AATCAGAATA CAGTGCAACC CGTGACGAAA 600 TGATGAAGCT AATGAGCACC ACTCGGGAGC TGAGTAGCAA TGCTCTTTCC ATG 108751 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| TGATGAAGCT AATGAGCACC ACTCGGGAGC TGAGTAGCAA TGCTCTTTCC ATG 653 hqPGS_C01HBa0163B20.1+_SGN-E334715+ (108101 108751) ******************************************************************************** EST sequence 204 +strand 767 n (File: SGN-E546809+) 1 AGGGAACTCC CCCCATTAAA AAAATCCAAA AAAATCAAAA AAACCAAAAA AATGACAAAG 61 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 121 GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG GAGTTGCAAC TTCAACAAAG 181 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 241 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 301 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 361 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 421 AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 481 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 541 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACCCGG 601 GAGCTAAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 661 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAACCGT 721 AAGCTCCTTT CAATTTCTGC CTCCAAGCCT AATGCTGTGG GTTCTGC Predicted gene structure (within gDNA segment 107526 to 109564): Exon 1 108126 108891 ( 766 n); cDNA 1 767 ( 767 n); score: 0.982 MATCH C01HBa0163B20.1+ SGN-E546809+ 0.982 766 0.999 C PGS_C01HBa0163B20.1+_SGN-E546809+ (108126 108891) Alignment (genomic DNA sequence = upper lines): AGGGAACTCC CCCCATAAAA AAAATCCAAA AAAATCA-AA AAACCAAAAA AATGACAAAG 108184 |||||||||| |||||| ||| |||||||||| ||||||| || |||||||||| |||||||||| AGGGAACTCC CCCCATTAAA AAAATCCAAA AAAATCAAAA AAACCAAAAA AATGACAAAG 60 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 108244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 120 GTCACCCTGA CTAAACATGA TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG 108304 |||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGACCCT TCATCAAATG GAGTTGCAAC TTCAACAAAG 180 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 108364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 240 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 108424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 300 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT 108484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 360 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 108544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 420 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 108604 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGGCTCTG TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 480 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 108664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 540 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG 108724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACCCGG 600 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 108784 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCTAAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 660 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAATCGT 108844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAACCGT 720 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTGC 108891 ||||||||| ||||||||| |||||||||| |||||||||| |||||| AAGCTCCTTT CAATTTCTGC CTCCAAGCCT AATGCTGTGG GTTCTGC 767 hqPGS_C01HBa0163B20.1+_SGN-E546809+ (108126 108891) ******************************************************************************** EST sequence 81 +strand 542 n (File: SGN-E332238+) 1 CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA GTCAAACAAG GTGGTAATTG 61 GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 121 AACATGATTC TGATACATCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 181 TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 241 TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 301 ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 361 CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTATCG 421 CTAGGATTGA GAACTTTGAT TTCTCAAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 481 GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 541 AC Predicted gene structure (within gDNA segment 107537 to 109289): Exon 1 108137 108679 ( 543 n); cDNA 1 542 ( 542 n); score: 0.989 MATCH C01HBa0163B20.1+ SGN-E332238+ 0.989 543 1.002 C PGS_C01HBa0163B20.1+_SGN-E332238+ (108137 108679) Alignment (genomic DNA sequence = upper lines): CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA TGACAAAGAA GGTGGTAATT 108196 |||||||||| |||||||||| |||||||||| |||||||||| | |||| || |||||||||| CCCATAAAAA AAATCCAAAA AAATCAAAAA ACCAAAAAAA -GTCAAACAA GGTGGTAATT 59 GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT CACCCTGACT 108256 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGAATAG CTTCTGTTCT TGTGGTGGCT TGTGTGGTGG CAGCCTGTGT CACCCTGACT 119 AAACATGATT CTGATACTTC ATCAAATGGA GTTGCAACTT CAACAAAGTC AGTTGAATCT 108316 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AAACATGATT CTGATACATC ATCAAATGGA GTTGCAACTT CAACAAAGTC AGTTGAATCT 179 ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC AGCAAAGAAT 108376 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTGTCAAC CCACACCATA CAAACAAACT TGTGAAAAGA CCCTCTCCGC AGCAAAGAAT 239 GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC AGACATCAAG 108436 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTCCGATC CAAAGGACTA CATCAAGGTT GCATTCGAAG CCACTGTGGC AGACATCAAG 299 AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCTA GTGATCCTTA CACCAAAGAC 108496 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AATGCCATCA AGAACACTGA GCCAGTTAAG AAAGCTGCCA GTGATCCTTA CACCAAAGAC 359 GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG GGGCTCTATC 108556 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT CTAGCCGTTG AGGAACTAAG GGGCTCTATC 419 GCTAGGATTG AGAACTTTGA TTTCTCTAAG ATGAAGGATA TAGTGGATGA CCTCAAGTCA 108616 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| GCTAGGATTG AGAACTTTGA TTTCTCAAAG ATGAAGGATA TAGTGGATGA CCTCAAGTCA 479 TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC CAAATCAGAA 108676 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCTTAGCG CTGTCGTTGC TTATGAAGAG ACTTGTTTAG ATGGTTTCAC CAAATCAGAA 539 TAC 108679 ||| TAC 542 hqPGS_C01HBa0163B20.1+_SGN-E332238+ (108137 108679) ******************************************************************************** EST sequence 177 +strand 640 n (File: SGN-E329360+) 1 AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG AAGGTGGTAA TTGGTGGAAT 61 AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT GTCACCCTGA CTAAACATGA 121 TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA 181 ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA 241 TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT 301 CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT TACACCAAAG ACGCTCTCCT 361 TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA AGGGGCTCTA TCGCTAGGAT 421 TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT GACCTCAAGT CATGGCTTAG 481 CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC ACCAAATCAG AATACAGTGC 541 AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG GAGCTGAGTA GCAATGCTCT 601 TTCCATGGTC AACAACTTCG GTGAAATGAT CACACAAAAC Predicted gene structure (within gDNA segment 107392 to 109394): Exon 1 108145 108784 ( 640 n); cDNA 1 640 ( 640 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E329360+ 0.995 640 1.000 C PGS_C01HBa0163B20.1+_SGN-E329360+ (108145 108784) Alignment (genomic DNA sequence = upper lines): AAAAATCCAA AAAAATCAAA AAACCAAAAA AATGACAAAG AAGGTGGTAA TTGGTGGAAT 108204 |||||||||| ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATCCAA AAAAACAAAA AAACCAAAAA AATGACAAAG AAGGTGGTAA TTGGTGGAAT 60 AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT GTCACCCTGA CTAAACATGA 108264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT GTCACCCTGA CTAAACATGA 120 TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA 108324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG TCAGTTGAAT CTATGTGTCA 180 ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA 108384 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC GCAGCAAAGA ATGTGTCCGA 240 TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT 108444 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG GCAGACATCA AGAATGCCAT 300 CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT TACACCAAAG ACGCTCTCCT 108504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT TACACCAAAG ACGCTCTCCT 360 TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA AGGGGCTCTA TCGCTAGGAT 108564 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA AGGGGCTCTA TCGCTAGGAT 420 TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT GACCTCAAGT CATGGCTTAG 108624 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT GACCTCAAGT CATGGCTTAG 480 CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC ACCAAATCAG AATACAGTGC 108684 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC ACCAAATCAG AATACAGTGC 540 AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG GAGCTGAGTA GCAATGCTCT 108744 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG GAGCTGAGTA GCAATGCTCT 600 TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 108784 |||||||||| |||| ||||| |||||||||| |||||||||| TTCCATGGTC AACAACTTCG GTGAAATGAT CACACAAAAC 640 hqPGS_C01HBa0163B20.1+_SGN-E329360+ (108145 108784) ******************************************************************************** EST sequence 207 +strand 735 n (File: SGN-E546845+) 1 AAAATCAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC 61 TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT 121 CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT 181 ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT 241 ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG 301 AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG 361 AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG 421 ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG 481 CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG 541 AAATGATGAA GCTAATGAGC ACCACCCGGG AGCTAAGTAG CAATGCTCTT TCCATGGTCA 601 ACAGCTTCGG TGAAATGATC ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA 661 GTGACTCATT TGTCGAAGCC AGTAACCGTA AGCTCCCTTC AATTTCTGCC TCCAAGCCTA 721 TGCTGTGGTT TCTGC Predicted gene structure (within gDNA segment 107556 to 109501): Exon 1 108156 108891 ( 736 n); cDNA 1 735 ( 735 n); score: 0.985 MATCH C01HBa0163B20.1+ SGN-E546845+ 0.985 736 1.001 C PGS_C01HBa0163B20.1+_SGN-E546845+ (108156 108891) Alignment (genomic DNA sequence = upper lines): AAAATCAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC 108215 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAATCAAAA AACCAAAAAA ATGACAAAGA AGGTGGTAAT TGGTGGAATA GCTTCTGTTC 60 TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGATACTT 108275 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| TTGTGGTGGC TTGTGTGGTG GCAGCCTGTG TCACCCTGAC TAAACATGAT TCTGACCCTT 120 CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT 108335 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCAAATGG AGTTGCAACT TCAACAAAGT CAGTTGAATC TATGTGTCAA CCCACACCAT 180 ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT 108395 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAACAAAC TTGTGAAAAG ACCCTCTCCG CAGCAAAGAA TGTGTCCGAT CCAAAGGACT 240 ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG 108455 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATCAAGGT TGCATTCGAA GCCACTGTGG CAGACATCAA GAATGCCATC AAGAACACTG 300 AGCCAGTTAA GAAAGCTGCT AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG 108515 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAGTTAA GAAAGCTGCC AGTGATCCTT ACACCAAAGA CGCTCTCCTT GCTTGTGAAG 360 AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTAT CGCTAGGATT GAGAACTTTG 108575 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGTGTTTGA TCTAGCCGTT GAGGAACTAA GGGGCTCTGT CGCTAGGATT GAGAACTTTG 420 ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG 108635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTTCTCTAA GATGAAGGAT ATAGTGGATG ACCTCAAGTC ATGGCTTAGC GCTGTCGTTG 480 CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG 108695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTATGAAGA GACTTGTTTA GATGGTTTCA CCAAATCAGA ATACAGTGCA ACCCGTGACG 540 AAATGATGAA GCTAATGAGC ACCACTCGGG AGCTGAGTAG CAATGCTCTT TCCATGGTCA 108755 |||||||||| |||||||||| ||||| |||| |||| ||||| |||||||||| |||||||||| AAATGATGAA GCTAATGAGC ACCACCCGGG AGCTAAGTAG CAATGCTCTT TCCATGGTCA 600 ACAGCTTCGG TGAAATGATC ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA 108815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGCTTCGG TGAAATGATC ACACAAAACA CAGGCCTTAC CCGCAAATTG TTATCAAACA 660 GTGACTCATT TGTCGAAGCC AGTAATCGTA AGCTCCTTCA AATTTCTGCC TCCAAGCCTA 108875 |||||||||| |||||||||| ||||| |||| |||||| | |||||||||| ||||||||| GTGACTCATT TGTCGAAGCC AGTAACCGTA AGCTCCCTTC AATTTCTGCC TCCAAGCCT- 719 ATGCTGTGGT TTCTGC 108891 |||||||||| |||||| ATGCTGTGGT TTCTGC 735 hqPGS_C01HBa0163B20.1+_SGN-E546845+ (108156 108891) ******************************************************************************** EST sequence 72 +strand 722 n (File: SGN-E331929+) 1 AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 61 GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC 121 AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 181 AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GGCTACATCA AGGTTGCATT 241 CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 301 TGCTAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 361 CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA 421 GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 481 TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 541 GAGCACCACT CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT 601 GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 661 AGCCAGTAAT CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTGC 721 CA Predicted gene structure (within gDNA segment 107572 to 109503): Exon 1 108172 108893 ( 722 n); cDNA 1 722 ( 722 n); score: 0.999 MATCH C01HBa0163B20.1+ SGN-E331929+ 0.999 722 1.000 C PGS_C01HBa0163B20.1+_SGN-E331929+ (108172 108893) Alignment (genomic DNA sequence = upper lines): AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 108231 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAATGACA AAGAAGGTGG TAATTGGTGG AATAGCTTCT GTTCTTGTGG TGGCTTGTGT 60 GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC 108291 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGGCAGCC TGTGTCACCC TGACTAAACA TGATTCTGAT ACTTCATCAA ATGGAGTTGC 120 AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 108351 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCAACA AAGTCAGTTG AATCTATGTG TCAACCCACA CCATACAAAC AAACTTGTGA 180 AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT 108411 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| AAAGACCCTC TCCGCAGCAA AGAATGTGTC CGATCCAAAG GGCTACATCA AGGTTGCATT 240 CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 108471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGAAGCCACT GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC 300 TGCTAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 108531 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTAGTGAT CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC 360 CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA 108591 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGAGGAA CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA 420 GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 108651 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATATAGTG GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG 480 TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 108711 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTAGATGGT TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT 540 GAGCACCACT CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT 108771 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGCACCACT CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT 600 GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 108831 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCACACAA AACACAGGCC TTACCCGCAA ATTGTTATCA AACAGTGACT CATTTGTCGA 660 AGCCAGTAAT CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTGC 108891 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAGTAAT CGTAAGCTCC TTCAAATTTC TGCCTCCAAG CCTAATGCTG TGGTTTCTGC 720 CA 108893 || CA 722 hqPGS_C01HBa0163B20.1+_SGN-E331929+ (108172 108893) ******************************************************************************** EST sequence 144 +strand 784 n (File: SGN-E333795+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 301 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAAGT GTTTGATCTA GCCGTTGAGG 361 AACTAAGGGG CTCTATCGCT ANGATTGAGA ACTTTGATTT CTCNAAGATG AAGGATATAG 421 TGGATGACCC TCAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 481 GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATGAGTACCA 541 CCCGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 601 AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 661 ACCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC TGTGGTTTCT ACCAGTGGAG 721 GCGGACAATA CNAGACCATT CAGGAAGCAC TTNCAGCTGT CCCCAGAAGC AGTCCAACTC 781 CTTT Predicted gene structure (within gDNA segment 107581 to 109861): Exon 1 108181 108963 ( 783 n); cDNA 1 784 ( 784 n); score: 0.970 MATCH C01HBa0163B20.1+ SGN-E333795+ 0.970 783 0.999 C PGS_C01HBa0163B20.1+_SGN-E333795+ (108181 108963) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 108240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACTTCATCA AATGGAGTTG CAACTTCAAC 108300 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 108360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 108420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAA-GA ACACTGAGCC AGTTAAGAAA GCTGCTAGTG 108479 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ||||| |||| TGTGGCAGAC ATCAAGAATG CCATCAAGGA ACACTGAGCC AGTTAAGAAA GCTGCCAGTG 300 ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAGGT GTTTGATCTA GCCGTTGAGG 108539 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ATCCTTACAC CAAAGACGCT CTCCTTGCTT GTGAAGAAGT GTTTGATCTA GCCGTTGAGG 360 AACTAAGGGG CTCTATCGCT AGGATTGAGA ACTTTGATTT CTCTAAGATG AAGGATATAG 108599 |||||||||| |||||||||| | |||||||| |||||||||| ||| |||||| |||||||||| AACTAAGGGG CTCTATCGCT ANGATTGAGA ACTTTGATTT CTCNAAGATG AAGGATATAG 420 TGGATGACCT CAAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 108659 ||||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGATGACCC TCAGTCATGG CTTAGCGCTG TCGTTGCTTA TGAAGAGACT TGTTTAGATG 480 GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATGAGCACCA 108719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| GTTTCACCAA ATCAGAATAC AGTGCAACCC GTGACGAAAT GATGAAGCTA ATGAGTACCA 540 CTCGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAG CTTCGGTGAA ATGATCACAC 108779 | |||||||| |||||||||| |||||||||| ||||||||| ||| |||||| |||||||||| CCCGGGAGCT GAGTAGCAAT GCTCTTTCCA TGGTCAACAA CTTTGGTGAA ATGATCACAC 600 AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCCAGTA 108839 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| AAAACACAGG CCTTACCCGC AAATTGTTAT CAAACAGTGA CTCATTTGTC GAAGCTAGTA 660 ATCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC TGTGGTTTCT GCCAGTGGAG 108899 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ACCGTAAGCT CCTTCAAATT TCTGCCTCCA AGCCTAATGC TGTGGTTTCT ACCAGTGGAG 720 GCGGACAATA CAAGACCATT CAGGAAGCAC TTCAAGCTGT CCCCAAGAGT AGTCCAACTC 108959 |||||||||| | |||||||| |||||||||| || |||||| ||||| || |||||||||| GCGGACAATA CNAGACCATT CAGGAAGCAC TTNCAGCTGT CCCCAGAAGC AGTCCAACTC 780 CTTT 108963 |||| CTTT 784 hqPGS_C01HBa0163B20.1+_SGN-E333795+ (108181 108963) ******************************************************************************** EST sequence 101 +strand 711 n (File: SGN-E332713+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 301 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 361 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 421 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 481 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 541 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 601 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 661 CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCTAATGCTG TGGTTTCTAC C Predicted gene structure (within gDNA segment 107581 to 109529): Exon 1 108181 108892 ( 712 n); cDNA 1 711 ( 711 n); score: 0.985 MATCH C01HBa0163B20.1+ SGN-E332713+ 0.985 712 1.001 C PGS_C01HBa0163B20.1+_SGN-E332713+ (108181 108892) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 108240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACTTCATCA AATGGAGTTG CAACTTCAAC 108300 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 108360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 108420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCTAGTGA 108480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 300 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 108540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 360 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCTAAGATGA AGGATATAGT 108600 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 420 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 108660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 480 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGCACCAC 108720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 540 TCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAGC TTCGGTGAAA TGATCACACA 108780 ||||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 600 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCCAGTAA 108840 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCTAGTAA 660 TCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTG CC 108892 ||||||||| |||||||||| |||||||||| | |||||||| ||||||||| || CCGTAAGCTC CTTCAAATTT CTGCCTCCAA G-CTAATGCT GTGGTTTCTA CC 711 hqPGS_C01HBa0163B20.1+_SGN-E332713+ (108181 108892) ******************************************************************************** EST sequence 106 +strand 712 n (File: SGN-E332866+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 301 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 361 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 421 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 481 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 541 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 601 AAACACAGGC CTTACCCGCA AATTGTTATN CAACAGTGAC TCATTTGTCG AAGCTAGTAA 661 CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA CC Predicted gene structure (within gDNA segment 107581 to 109529): Exon 1 108181 108892 ( 712 n); cDNA 1 712 ( 712 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E332866+ 0.983 712 1.000 C PGS_C01HBa0163B20.1+_SGN-E332866+ (108181 108892) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 108240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACTTCATCA AATGGAGTTG CAACTTCAAC 108300 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 108360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 108420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCTAGTGA 108480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 300 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 108540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 360 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCTAAGATGA AGGATATAGT 108600 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 420 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 108660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 480 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGCACCAC 108720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 540 TCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAGC TTCGGTGAAA TGATCACACA 108780 ||||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAC TTTGGTGAAA TGATCACACA 600 AAACACAGGC CTTACCCGCA AATTGTTATC AAACAGTGAC TCATTTGTCG AAGCCAGTAA 108840 |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| |||| ||||| AAACACAGGC CTTACCCGCA AATTGTTATN CAACAGTGAC TCATTTGTCG AAGCTAGTAA 660 TCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTG CC 108892 ||||||||| |||||||||| |||||||||| |||||||||| ||||||||| || CCGTAAGCTC CTTCAAATTT CTGCCTCCAA GCCTAATGCT GTGGTTTCTA CC 712 hqPGS_C01HBa0163B20.1+_SGN-E332866+ (108181 108892) ******************************************************************************** EST sequence 114 +strand 608 n (File: SGN-E333056+) 1 AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 61 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 121 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 181 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 241 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 301 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 361 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 421 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 481 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 541 CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAA CTTTGGTGAA ATGATCACAC 601 AAAACACA Predicted gene structure (within gDNA segment 107581 to 109397): Exon 1 108181 108787 ( 607 n); cDNA 1 608 ( 608 n); score: 0.984 MATCH C01HBa0163B20.1+ SGN-E333056+ 0.984 607 0.998 C PGS_C01HBa0163B20.1+_SGN-E333056+ (108181 108787) Alignment (genomic DNA sequence = upper lines): AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 108240 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGAAGGTG GTAATTGGTG GAATAGCTTC TGTTCTTGTG GTGGCTTGTG TGGTGGCAGC 60 CTGTGTCACC CTGACTAAAC ATGATTCTGA TACTTCATCA AATGGAGTTG CAACTTCAAC 108300 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CTGTGTCACC CTGACTAAAC ATGATTCTGA TACATCATCA AATGGAGTTG CAACTTCAAC 120 AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 108360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGTCAGTT GAATCTATGT GTCAACCCAC ACCATACAAA CAAACTTGTG AAAAGACCCT 180 CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 108420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCGCAGCA AAGAATGTGT CCGATCCAAA GGACTACATC AAGGTTGCAT TCGAAGCCAC 240 TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCTAGTGA 108480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TGTGGCAGAC ATCAAGAATG CCATCAAGAA CACTGAGCCA GTTAAGAAAG CTGCCAGTGA 300 TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 108540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTTACACC AAAGACGCTC TCCTTGCTTG TGAAGAGGTG TTTGATCTAG CCGTTGAGGA 360 ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCTAAGATGA AGGATATAGT 108600 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| ACTAAGGGGC TCTATCGCTA GGATTGAGAA CTTTGATTTC TCAAAGATGA AGGATATAGT 420 GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 108660 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATGACCTC AAGTCATGGC TTAGCGCTGT CGTTGCTTAT GAAGAGACTT GTTTAGATGG 480 TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGCACCAC 108720 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TTTCACCAAA TCAGAATACA GTGCAACCCG TGACGAAATG ATGAAGCTAA TGAGTACCAC 540 TCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAAC-AG CTTCGGTGAA ATGATCACAC 108779 ||||||||| |||||||||| |||||||||| ||||||| | ||| |||||| |||||||||| CCGGGAGCTG AGTAGCAATG CTCTTTCCAT GGTCAACAAA CTTTGGTGAA ATGATCACAC 600 AAAACACA 108787 |||||||| AAAACACA 608 hqPGS_C01HBa0163B20.1+_SGN-E333056+ (108181 108787) ******************************************************************************** EST sequence 174 +strand 792 n (File: SGN-E333892+) 1 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 61 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 121 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 181 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 241 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 301 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 361 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 421 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 481 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 541 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 601 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 661 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 721 CAATACAAGA CCATTCAGGA AGCACTTNCA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 781 GTTATCCCTG AT Predicted gene structure (within gDNA segment 107585 to 109631): Exon 1 108185 108975 ( 791 n); cDNA 1 792 ( 792 n); score: 0.979 MATCH C01HBa0163B20.1+ SGN-E333892+ 0.979 791 0.999 C PGS_C01HBa0163B20.1+_SGN-E333892+ (108185 108975) Alignment (genomic DNA sequence = upper lines): AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 108244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 60 GTCACCCTGA CTAAACATGA TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG 108304 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 120 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 108364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 180 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 108424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 240 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT 108484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 300 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 108544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 360 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 108604 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 420 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 108664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 480 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG 108724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 540 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 108784 |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| |||||||||| GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 600 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAATCGT 108844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 660 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTGCCAG TGGAGGCGGA 108904 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 720 CAATACAAGA CCATTCAGGA AGCACTTCAA GCTGTCCCCA AGAGTAGTCC AACTCCTTTC 108964 |||||||||| |||||||||| ||||||| | |||||||||| ||| ||||| |||||||||| CAATACAAGA CCATTCAGGA AGCACTTNCA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 780 GTTAT-CCTG AT 108975 ||||| |||| || GTTATCCCTG AT 792 hqPGS_C01HBa0163B20.1+_SGN-E333892+ (108185 108975) ******************************************************************************** EST sequence 171 +strand 790 n (File: SGN-E333848+) 1 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 61 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 121 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 181 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 241 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 301 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 361 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 421 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 481 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 541 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 601 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 661 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 721 CAATACAAGA ACATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 781 GTTATCCTGA Predicted gene structure (within gDNA segment 107585 to 109584): Exon 1 108185 108974 ( 790 n); cDNA 1 790 ( 790 n); score: 0.984 MATCH C01HBa0163B20.1+ SGN-E333848+ 0.984 790 1.000 C PGS_C01HBa0163B20.1+_SGN-E333848+ (108185 108974) Alignment (genomic DNA sequence = upper lines): AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 108244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 60 GTCACCCTGA CTAAACATGA TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG 108304 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 120 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 108364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 180 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 108424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 240 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT 108484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 300 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 108544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 360 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 108604 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 420 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 108664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 480 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG 108724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 540 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 108784 |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| |||||||||| GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 600 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAATCGT 108844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 660 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTGCCAG TGGAGGCGGA 108904 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTACCAG TGGAGGCGGA 720 CAATACAAGA CCATTCAGGA AGCACTTCAA GCTGTCCCCA AGAGTAGTCC AACTCCTTTC 108964 |||||||||| ||||||||| |||||||||| |||||||||| ||| ||||| |||||||||| CAATACAAGA ACATTCAGGA AGCACTTCAA GCTGTCCCCA GGAGCAGTCC AACTCCTTTC 780 GTTATCCTGA 108974 |||||||||| GTTATCCTGA 790 hqPGS_C01HBa0163B20.1+_SGN-E333848+ (108185 108974) ******************************************************************************** EST sequence 125 +strand 708 n (File: SGN-E333232+) 1 AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 61 GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 121 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 181 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 241 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 301 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 361 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 421 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 481 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 541 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 601 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 661 AAGCTCCTTC AAATTTCTGC CNTCAAGCCT AATGCTGTGG TTTCTACC Predicted gene structure (within gDNA segment 107585 to 109529): Exon 1 108185 108892 ( 708 n); cDNA 1 708 ( 708 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E333232+ 0.983 708 1.000 C PGS_C01HBa0163B20.1+_SGN-E333232+ (108185 108892) Alignment (genomic DNA sequence = upper lines): AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 108244 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTGGTAA TTGGTGGAAT AGCTTCTGTT CTTGTGGTGG CTTGTGTGGT GGCAGCCTGT 60 GTCACCCTGA CTAAACATGA TTCTGATACT TCATCAAATG GAGTTGCAAC TTCAACAAAG 108304 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GTCACCCTGA CTAAACATGA TTCTGATACA TCATCAAATG GAGTTGCAAC TTCAACAAAG 120 TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 108364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAGTTGAAT CTATGTGTCA ACCCACACCA TACAAACAAA CTTGTGAAAA GACCCTCTCC 180 GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 108424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGCAAAGA ATGTGTCCGA TCCAAAGGAC TACATCAAGG TTGCATTCGA AGCCACTGTG 240 GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC TAGTGATCCT 108484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GCAGACATCA AGAATGCCAT CAAGAACACT GAGCCAGTTA AGAAAGCTGC CAGTGATCCT 300 TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 108544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACCAAAG ACGCTCTCCT TGCTTGTGAA GAGGTGTTTG ATCTAGCCGT TGAGGAACTA 360 AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCTA AGATGAAGGA TATAGTGGAT 108604 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGGGCTCTA TCGCTAGGAT TGAGAACTTT GATTTCTCAA AGATGAAGGA TATAGTGGAT 420 GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 108664 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACCTCAAGT CATGGCTTAG CGCTGTCGTT GCTTATGAAG AGACTTGTTT AGATGGTTTC 480 ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG CACCACTCGG 108724 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACCAAATCAG AATACAGTGC AACCCGTGAC GAAATGATGA AGCTAATGAG TACCACCCGG 540 GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAGCTTCG GTGAAATGAT CACACAAAAC 108784 |||||||||| |||||||||| |||||||||| |||| ||| | |||||||||| |||||||||| GAGCTGAGTA GCAATGCTCT TTCCATGGTC AACAACTTTG GTGAAATGAT CACACAAAAC 600 ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC CAGTAATCGT 108844 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| ACAGGCCTTA CCCGCAAATT GTTATCAAAC AGTGACTCAT TTGTCGAAGC TAGTAACCGT 660 AAGCTCCTTC AAATTTCTGC CTCCAAGCCT AATGCTGTGG TTTCTGCC 108892 |||||||||| |||||||||| | ||||||| |||||||||| ||||| || AAGCTCCTTC AAATTTCTGC CNTCAAGCCT AATGCTGTGG TTTCTACC 708 hqPGS_C01HBa0163B20.1+_SGN-E333232+ (108185 108892) ******************************************************************************** EST sequence 198 +strand 780 n (File: SGN-E546751+) 1 GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 61 AACATGATTC TGACCCTTCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 121 TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 181 TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 241 ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 301 CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTGTCG 361 CTAGGATTGA GAACTTTGAT TTCTCTAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 421 GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 481 ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC CACCCGGGAG CTAAGTAGCA 541 ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC ACAAAACACA GGCCTTACCC 601 GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG TAACCGTAAG CTCCTTCAAA 661 TTTCTGCCTC CAAGCCTAAT GCTGTGGGTT CTGCCAGTGG AGGCGGACNA TACNAGACCA 721 TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCAAAC TCCTTTCGTT ATCCTGATCA Predicted gene structure (within gDNA segment 107598 to 109587): Exon 1 108198 108977 ( 780 n); cDNA 1 780 ( 780 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E546751+ 0.983 780 1.000 C PGS_C01HBa0163B20.1+_SGN-E546751+ (108198 108977) Alignment (genomic DNA sequence = upper lines): GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 108257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGAATAGC TTCTGTTCTT GTGGTGGCTT GTGTGGTGGC AGCCTGTGTC ACCCTGACTA 60 AACATGATTC TGATACTTCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 108317 |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| AACATGATTC TGACCCTTCA TCAAATGGAG TTGCAACTTC AACAAAGTCA GTTGAATCTA 120 TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 108377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGTCAACC CACACCATAC AAACAAACTT GTGAAAAGAC CCTCTCCGCA GCAAAGAATG 180 TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 108437 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCGATCC AAAGGACTAC ATCAAGGTTG CATTCGAAGC CACTGTGGCA GACATCAAGA 240 ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCTAG TGATCCTTAC ACCAAAGACG 108497 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ATGCCATCAA GAACACTGAG CCAGTTAAGA AAGCTGCCAG TGATCCTTAC ACCAAAGACG 300 CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTATCG 108557 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| CTCTCCTTGC TTGTGAAGAG GTGTTTGATC TAGCCGTTGA GGAACTAAGG GGCTCTGTCG 360 CTAGGATTGA GAACTTTGAT TTCTCTAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 108617 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGGATTGA GAACTTTGAT TTCTCTAAGA TGAAGGATAT AGTGGATGAC CTCAAGTCAT 420 GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 108677 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCTTAGCGC TGTCGTTGCT TATGAAGAGA CTTGTTTAGA TGGTTTCACC AAATCAGAAT 480 ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC CACTCGGGAG CTGAGTAGCA 108737 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| || ||||||| ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC CACCCGGGAG CTAAGTAGCA 540 ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC ACAAAACACA GGCCTTACCC 108797 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC ACAAAACACA GGCCTTACCC 600 GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG TAATCGTAAG CTCCTTCAAA 108857 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG TAACCGTAAG CTCCTTCAAA 660 TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTGCCAGTGG AGGCGGACAA TACAAGACCA 108917 |||||||||| |||||||||| ||||||| || |||||||||| |||||||| | ||| |||||| TTTCTGCCTC CAAGCCTAAT GCTGTGGGTT CTGCCAGTGG AGGCGGACNA TACNAGACCA 720 TTCAGGAAGC ACTTCAAGCT GTCCCCAAGA GTAGTCCAAC TCCTTTCGTT ATCCTGATCA 108977 |||||||||| |||||||||| ||||||| || | |||| ||| |||||||||| |||||||||| TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCAAAC TCCTTTCGTT ATCCTGATCA 780 hqPGS_C01HBa0163B20.1+_SGN-E546751+ (108198 108977) ******************************************************************************** EST sequence 83 +strand 414 n (File: SGN-E332772+) 1 TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT CAAATGGAGT 61 TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG 121 TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC 181 ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA 241 AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT 301 AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCTAAGAT 361 GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGA Predicted gene structure (within gDNA segment 107629 to 109252): Exon 1 108229 108642 ( 414 n); cDNA 1 414 ( 414 n); score: 1.000 MATCH C01HBa0163B20.1+ SGN-E332772+ 1.000 414 1.000 C PGS_C01HBa0163B20.1+_SGN-E332772+ (108229 108642) Alignment (genomic DNA sequence = upper lines): TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT CAAATGGAGT 108288 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTGGTGGCA GCCTGTGTCA CCCTGACTAA ACATGATTCT GATACTTCAT CAAATGGAGT 60 TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG 108348 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAACTTCA ACAAAGTCAG TTGAATCTAT GTGTCAACCC ACACCATACA AACAAACTTG 120 TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC 108408 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAAAGACC CTCTCCGCAG CAAAGAATGT GTCCGATCCA AAGGACTACA TCAAGGTTGC 180 ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA 108468 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCGAAGCC ACTGTGGCAG ACATCAAGAA TGCCATCAAG AACACTGAGC CAGTTAAGAA 240 AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT 108528 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGCTAGT GATCCTTACA CCAAAGACGC TCTCCTTGCT TGTGAAGAGG TGTTTGATCT 300 AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCTAAGAT 108588 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCGTTGAG GAACTAAGGG GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCTAAGAT 360 GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGA 108642 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| GAAGGATATA GTGGATGACC TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGA 414 hqPGS_C01HBa0163B20.1+_SGN-E332772+ (108229 108642) ******************************************************************************** EST sequence 116 +strand 436 n (File: SGN-E326012+) 1 TCCGCAGCAT AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 61 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 121 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 181 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 241 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 301 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 361 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 421 AACACAGGCC TTACCC Predicted gene structure (within gDNA segment 107672 to 109407): Exon 1 108362 108797 ( 436 n); cDNA 1 436 ( 436 n); score: 0.998 MATCH C01HBa0163B20.1+ SGN-E326012+ 0.998 436 1.000 C PGS_C01HBa0163B20.1+_SGN-E326012+ (108362 108797) Alignment (genomic DNA sequence = upper lines): TCCGCAGCAA AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 108421 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCGCAGCAT AGAATGTGTC CGATCCAAAG GACTACATCA AGGTTGCATT CGAAGCCACT 60 GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 108481 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGCAGACA TCAAGAATGC CATCAAGAAC ACTGAGCCAG TTAAGAAAGC TGCTAGTGAT 120 CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 108541 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTTACACCA AAGACGCTCT CCTTGCTTGT GAAGAGGTGT TTGATCTAGC CGTTGAGGAA 180 CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 108601 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAGGGGCT CTATCGCTAG GATTGAGAAC TTTGATTTCT CTAAGATGAA GGATATAGTG 240 GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 108661 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGACCTCA AGTCATGGCT TAGCGCTGTC GTTGCTTATG AAGAGACTTG TTTAGATGGT 300 TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 108721 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCACCAAAT CAGAATACAG TGCAACCCGT GACGAAATGA TGAAGCTAAT GAGCACCACT 360 CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 108781 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGGAGCTGA GTAGCAATGC TCTTTCCATG GTCAACAGCT TCGGTGAAAT GATCACACAA 420 AACACAGGCC TTACCC 108797 |||||||||| |||||| AACACAGGCC TTACCC 436 hqPGS_C01HBa0163B20.1+_SGN-E326012+ (108362 108797) ******************************************************************************** EST sequence 98 +strand 685 n (File: SGN-E332551+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 601 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGG 661 TGTTTGTGGT GATGGTTTCG TTATG Predicted gene structure (within gDNA segment 107867 to 109760): Exon 1 108467 109150 ( 684 n); cDNA 1 685 ( 685 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E332551+ 0.995 684 0.999 C PGS_C01HBa0163B20.1+_SGN-E332551+ (108467 109150) Alignment (genomic DNA sequence = upper lines): AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 108526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 108586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 108646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 108706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 108766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 108826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 108886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 108946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGTAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 109006 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 109066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 600 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTT-GG 109125 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGG 660 TGTTTGTGGT GATGGTTTCG TTATG 109150 |||||||||| |||||||||| ||||| TGTTTGTGGT GATGGTTTCG TTATG 685 hqPGS_C01HBa0163B20.1+_SGN-E332551+ (108467 109150) ******************************************************************************** EST sequence 85 +strand 658 n (File: SGN-E332650+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAACG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 601 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG Predicted gene structure (within gDNA segment 107867 to 109734): Exon 1 108467 109124 ( 658 n); cDNA 1 658 ( 658 n); score: 0.997 MATCH C01HBa0163B20.1+ SGN-E332650+ 0.997 658 1.000 C PGS_C01HBa0163B20.1+_SGN-E332650+ (108467 109124) Alignment (genomic DNA sequence = upper lines): AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 108526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 108586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 108646 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAACG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 108706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 108766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 108826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 108886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 108946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGTAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 109006 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 109066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 600 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 109124 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 658 hqPGS_C01HBa0163B20.1+_SGN-E332650+ (108467 109124) ******************************************************************************** EST sequence 151 +strand 657 n (File: SGN-E334702+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCAACCAAG ACCATAATCA 601 CCGGTGACCA GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTG Predicted gene structure (within gDNA segment 107867 to 109734): Exon 1 108467 109124 ( 658 n); cDNA 1 657 ( 657 n); score: 0.997 MATCH C01HBa0163B20.1+ SGN-E334702+ 0.997 658 1.002 C PGS_C01HBa0163B20.1+_SGN-E334702+ (108467 109124) Alignment (genomic DNA sequence = upper lines): AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 108526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 108586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 108646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 108706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 108766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 108826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 108886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 108946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGTAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 109006 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 109066 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG G-CCAACCAA GACCATAATC 599 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 109124 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTG 657 hqPGS_C01HBa0163B20.1+_SGN-E334702+ (108467 109124) ******************************************************************************** EST sequence 139 +strand 650 n (File: SGN-E334236+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 421 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 481 AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 541 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 601 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC Predicted gene structure (within gDNA segment 107867 to 109726): Exon 1 108467 109116 ( 650 n); cDNA 1 650 ( 650 n); score: 0.998 MATCH C01HBa0163B20.1+ SGN-E334236+ 0.998 650 1.000 C PGS_C01HBa0163B20.1+_SGN-E334236+ (108467 109116) Alignment (genomic DNA sequence = upper lines): AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 108526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 108586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 108646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 108706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 108766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 108826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 108886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT 420 TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 108946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTGCCAGTG GAGGCGGACA ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG 480 AGTAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 109006 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAGTCCAA CTCCTTTCGT TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA 540 ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 109066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGAAAAGA ACATGCTAAA TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC 600 ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC 109116 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGGTGACC AGGCAGTAGT TCCTAACCGT ATATCAACAT GGCATACAGC 650 hqPGS_C01HBa0163B20.1+_SGN-E334236+ (108467 109116) ******************************************************************************** EST sequence 90 +strand 413 n (File: SGN-E332787+) 1 AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 61 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 121 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 181 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 241 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCCGT 301 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 361 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCCAGCCTAA TGC Predicted gene structure (within gDNA segment 107867 to 109588): Exon 1 108467 108879 ( 413 n); cDNA 1 413 ( 413 n); score: 0.995 MATCH C01HBa0163B20.1+ SGN-E332787+ 0.995 413 1.000 C PGS_C01HBa0163B20.1+_SGN-E332787+ (108467 108879) Alignment (genomic DNA sequence = upper lines): AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 108526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAGCTGCTA GTGATCCTTA CACCAAAGAC GCTCTCCTTG CTTGTGAAGA GGTGTTTGAT 60 CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 108586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAGCCGTTG AGGAACTAAG GGGCTCTATC GCTAGGATTG AGAACTTTGA TTTCTCTAAG 120 ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 108646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAAGGATA TAGTGGATGA CCTCAAGTCA TGGCTTAGCG CTGTCGTTGC TTATGAAGAG 180 ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 108706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTGTTTAG ATGGTTTCAC CAAATCAGAA TACAGTGCAA CCCGTGACGA AATGATGAAG 240 CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCGGT 108766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || CTAATGAGCA CCACTCGGGA GCTGAGTAGC AATGCTCTTT CCATGGTCAA CAGCTTCCGT 300 GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 108826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATGATCA CACAAAACAC AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT 360 GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGC 108879 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ||| GTCGAAGCCA GTAATCGTAA GCTCCTTCAA ATTTCTGCCT CCCAGCCTAA TGC 413 hqPGS_C01HBa0163B20.1+_SGN-E332787+ (108467 108879) ******************************************************************************** EST sequence 9 +strand 532 n (File: SGN-E331514+) 1 TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 61 CTTTGATTTC TCAAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 121 CGTTGCTTAT GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG 181 TGACGAAATG ATGAAGCTAA TGAGTACCAC CCGGGAGCTG AGTAGCAATG CTCTTTCCAT 241 GGTCAACAAC TTTGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC 301 AAACAGTGAC TCATTTGTCG AAGCTAGTAA CCGTAAGCTC CTTCAAATTT CTGCCTCCAA 361 GCCTAATGCT GTGGTTTCTA CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCACT 421 TCAAGCTGTC CCCAGGAGCA GTCCAACTCC TTTCGTTATC CTGATCAAGG CGGGTACATA 481 CAAGGAACAC ATTGAAATCG AAAAGAACAT GCTAAATGTT GTGCTTATTG GT Predicted gene structure (within gDNA segment 107911 to 109652): Exon 1 108511 109042 ( 532 n); cDNA 1 532 ( 532 n); score: 0.979 MATCH C01HBa0163B20.1+ SGN-E331514+ 0.979 532 1.000 C PGS_C01HBa0163B20.1+_SGN-E331514+ (108511 109042) Alignment (genomic DNA sequence = upper lines): TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 108570 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAGAGGTG TTTGATCTAG CCGTTGAGGA ACTAAGGGGC TCTATCGCTA GGATTGAGAA 60 CTTTGATTTC TCTAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 108630 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTTGATTTC TCAAAGATGA AGGATATAGT GGATGACCTC AAGTCATGGC TTAGCGCTGT 120 CGTTGCTTAT GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG 108690 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGCTTAT GAAGAGACTT GTTTAGATGG TTTCACCAAA TCAGAATACA GTGCAACCCG 180 TGACGAAATG ATGAAGCTAA TGAGCACCAC TCGGGAGCTG AGTAGCAATG CTCTTTCCAT 108750 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| TGACGAAATG ATGAAGCTAA TGAGTACCAC CCGGGAGCTG AGTAGCAATG CTCTTTCCAT 240 GGTCAACAGC TTCGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC 108810 |||||||| | || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCAACAAC TTTGGTGAAA TGATCACACA AAACACAGGC CTTACCCGCA AATTGTTATC 300 AAACAGTGAC TCATTTGTCG AAGCCAGTAA TCGTAAGCTC CTTCAAATTT CTGCCTCCAA 108870 |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| AAACAGTGAC TCATTTGTCG AAGCTAGTAA CCGTAAGCTC CTTCAAATTT CTGCCTCCAA 360 GCCTAATGCT GTGGTTTCTG CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCACT 108930 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTAATGCT GTGGTTTCTA CCAGTGGAGG CGGACAATAC AAGACCATTC AGGAAGCACT 420 TCAAGCTGTC CCCAAGAGTA GTCCAACTCC TTTCGTTATC CTGATCAAGG CGGGTACATA 108990 |||||||||| |||| ||| | |||||||||| |||||||||| |||||||||| |||||||||| TCAAGCTGTC CCCAGGAGCA GTCCAACTCC TTTCGTTATC CTGATCAAGG CGGGTACATA 480 CAAGGAACAC ATTCAAATCG AAAAGAACAT GCTAAATGTT GTGCTTATTG GT 109042 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| || CAAGGAACAC ATTGAAATCG AAAAGAACAT GCTAAATGTT GTGCTTATTG GT 532 hqPGS_C01HBa0163B20.1+_SGN-E331514+ (108511 109042) ******************************************************************************** EST sequence 201 +strand 560 n (File: SGN-E331151+) 1 GCCGCTCTAT CTTTAGGATT GAGAACTTTG ATTTCTCTAA GATGAAGGAT ATAGTGGATG 61 ACCTCAAGTC ATGGCTTATC GCTGTCGTTG CTTATGAAGA GACTTGTTTA GATGGTTTCA 121 CCAAATCAGA ATACAGTGCA ACCCGTGACG AAATGATGAA GCTAATGAGC ACCACTCTGG 181 AGCTGAGTAG CAATGCTCTT TCCATGGTCA ACAGCTTCGG TGAAATGATC ACACAAAACA 241 CAGGCCTTAC CCGCAAATTG TTATCAAACA GTGACTCATT TGTCGAAGCC AGTAATCGTA 301 AGCTCCTTCA AATTTCTGCC TCCAAGCCTA ATGCTGTGGT TTCTGCCAGT GGAAGCGGAC 361 AATACAAGAC CATTCAAGAA GCACTTCAAG CTGTCCCCAA GAGCAGTCCA ACTCCTTTCG 421 TTATCCTGAT CAAGGCGGGT ACATACAAGG AACACATTCA AATCGAAAAG AACATGCTAA 481 ATGTTGTGCT TATTGGTGAA AGCCCAACCA AGACCATAAT CACCGGTGAC CAGGCAGTAG 541 TTCCTAACCG TATATCAACA Predicted gene structure (within gDNA segment 107829 to 109715): Exon 1 108549 109105 ( 557 n); cDNA 4 560 ( 557 n); score: 0.986 MATCH C01HBa0163B20.1+ SGN-E331151+ 0.986 557 0.995 C PGS_C01HBa0163B20.1+_SGN-E331151+ (108549 109105) Alignment (genomic DNA sequence = upper lines): GCTCTATCGC TAGGATTGAG AACTTTGATT TCTCTAAGAT GAAGGATATA GTGGATGACC 108608 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTATCTT TAGGATTGAG AACTTTGATT TCTCTAAGAT GAAGGATATA GTGGATGACC 63 TCAAGTCATG GCTTAGCGCT GTCGTTGCTT ATGAAGAGAC TTGTTTAGAT GGTTTCACCA 108668 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGTCATG GCTTATCGCT GTCGTTGCTT ATGAAGAGAC TTGTTTAGAT GGTTTCACCA 123 AATCAGAATA CAGTGCAACC CGTGACGAAA TGATGAAGCT AATGAGCACC ACTCGGGAGC 108728 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| AATCAGAATA CAGTGCAACC CGTGACGAAA TGATGAAGCT AATGAGCACC ACTCTGGAGC 183 TGAGTAGCAA TGCTCTTTCC ATGGTCAACA GCTTCGGTGA AATGATCACA CAAAACACAG 108788 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGTAGCAA TGCTCTTTCC ATGGTCAACA GCTTCGGTGA AATGATCACA CAAAACACAG 243 GCCTTACCCG CAAATTGTTA TCAAACAGTG ACTCATTTGT CGAAGCCAGT AATCGTAAGC 108848 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCTTACCCG CAAATTGTTA TCAAACAGTG ACTCATTTGT CGAAGCCAGT AATCGTAAGC 303 TCCTTCAAAT TTCTGCCTCC AAGCCTAATG CTGTGGTTTC TGCCAGTGGA GGCGGACAAT 108908 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TCCTTCAAAT TTCTGCCTCC AAGCCTAATG CTGTGGTTTC TGCCAGTGGA AGCGGACAAT 363 ACAAGACCAT TCAGGAAGCA CTTCAAGCTG TCCCCAAGAG TAGTCCAACT CCTTTCGTTA 108968 |||||||||| ||| |||||| |||||||||| |||||||||| ||||||||| |||||||||| ACAAGACCAT TCAAGAAGCA CTTCAAGCTG TCCCCAAGAG CAGTCCAACT CCTTTCGTTA 423 TCCTGATCAA GGCGGGTACA TACAAGGAAC ACATTCAAAT CGAAAAGAAC ATGCTAAATG 109028 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTGATCAA GGCGGGTACA TACAAGGAAC ACATTCAAAT CGAAAAGAAC ATGCTAAATG 483 TTGTGCTTAT TGGTGAAGGC CCAACCAAGA CCATAATCAC CGGTGACCAG GCAGTAGTTC 109088 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTGTGCTTAT TGGTGAAAGC CCAACCAAGA CCATAATCAC CGGTGACCAG GCAGTAGTTC 543 CTAACCGTAT ATCAACA 109105 |||||||||| ||||||| CTAACCGTAT ATCAACA 560 hqPGS_C01HBa0163B20.1+_SGN-E331151+ (108549 109105) ******************************************************************************** EST sequence 120 +strand 694 n (File: SGN-E333376+) 1 AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 61 AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 121 GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 181 TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 241 ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 301 GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 361 CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 421 TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 481 AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA CAGCCACCCT 541 TGGTGTTTGT GGTGATGGTT TCGTTATGAA GGACATGGGT ATTGAAAACA CAGCAGGACC 601 CACAAAAGAA CAAGCCGTTG CATTGAGAAT TAATGCTGAN TAGGCTGNTC TCTACAACTG 661 NCATATCGAT GGTTACCAAG ACACGTTATA CGCT Predicted gene structure (within gDNA segment 107974 to 110381): Exon 1 108584 109276 ( 693 n); cDNA 2 694 ( 693 n); score: 0.977 MATCH C01HBa0163B20.1+ SGN-E333376+ 0.977 693 0.999 C PGS_C01HBa0163B20.1+_SGN-E333376+ (108584 109276) Alignment (genomic DNA sequence = upper lines): AAGATGAAGG ATATAGTGGA TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA 108643 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATGAAGG ATATAGTGGA TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA 61 GAGACTTGTT TAGATGGTTT CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG 108703 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGACTTGTT TAGATGGTTT CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG 121 AAGCTAATGA GCACCACTCG GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAACAGCTTC 108763 |||||||||| | ||||| || |||||||||| |||||||||| |||||||||| ||||| ||| AAGCTAATGA GTACCACCCG GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAACAACTTT 181 GGTGAAATGA TCACACAAAA CACAGGCCTT ACCCGCAAAT TGTTATCAAA CAGTGACTCA 108823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGAAATGA TCACACAAAA CACAGGCCTT ACCCGCAAAT TGTTATCAAA CAGTGACTCA 241 TTTGTCGAAG CCAGTAATCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 108883 |||||||||| | ||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAAG CTAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 301 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 108943 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTACCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 361 AAGAGTAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 109003 | ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 421 CAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 109063 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 481 ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 109123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 541 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 109183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 601 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC 109243 |||||||||| |||||||||| |||||||||| |||||||| |||||| ||| ||||||||| ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCTGANT AGGCTGNTCT CTACAACTGN 661 AATATCGATG GTTACCAAGA CACGTTATAT GCT 109276 ||||||||| |||||||||| ||||||||| ||| CATATCGATG GTTACCAAGA CACGTTATAC GCT 694 hqPGS_C01HBa0163B20.1+_SGN-E333376+ (108584 109276) ******************************************************************************** EST sequence 109 +strand 530 n (File: SGN-E333032+) 1 AAAGATGAAG GATATAGTGG ATGACCTCAA GTCATGGCTT AGCGCTGTCG TTGCTTATGA 61 AGAGACTTGT TTAGATGGTT TCACCAAATC AGAATACAGT GCAACCCGTG ACGAAATGAT 121 GAAGCTAATG AGTACCACCC GGGAGCTGAG TAGCAATGCT CTTTCCATGG TCAACAACTT 181 TGGTGAAATG ATCACACAAA ACACAGGCCT TACCCGCAAA TTGTTATCAA ACAGTGACTC 241 ATTTGTCGAA GCTAGTAACC GTAAGCTCCT TCAAATTTCT GCCTCCAAGC CTAATGCTGT 301 GGTTTCTACC AGTGGAGGCG GACAATACAA GACCATTCAG GAAGCACTTC AAGCTGTCCC 361 CAGGAGCAGT CCAACTCCTT TCGTTATCCT GATCAAGGCG GGTACATACA AGGAACACAT 421 TGAAATCGAA AAGAACATGC TAAATGTTGT GCTTATTGGT GAAGGCCCAA CCAAGACCAT 481 AATCACCGGT GACCAGGCAG TAGTTCCTAA CCGTATATCA ACATGGCATA Predicted gene structure (within gDNA segment 107974 to 109722): Exon 1 108584 109112 ( 529 n); cDNA 2 530 ( 529 n); score: 0.981 MATCH C01HBa0163B20.1+ SGN-E333032+ 0.981 529 0.998 C PGS_C01HBa0163B20.1+_SGN-E333032+ (108584 109112) Alignment (genomic DNA sequence = upper lines): AAGATGAAGG ATATAGTGGA TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA 108643 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATGAAGG ATATAGTGGA TGACCTCAAG TCATGGCTTA GCGCTGTCGT TGCTTATGAA 61 GAGACTTGTT TAGATGGTTT CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG 108703 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGACTTGTT TAGATGGTTT CACCAAATCA GAATACAGTG CAACCCGTGA CGAAATGATG 121 AAGCTAATGA GCACCACTCG GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAACAGCTTC 108763 |||||||||| | ||||| || |||||||||| |||||||||| |||||||||| ||||| ||| AAGCTAATGA GTACCACCCG GGAGCTGAGT AGCAATGCTC TTTCCATGGT CAACAACTTT 181 GGTGAAATGA TCACACAAAA CACAGGCCTT ACCCGCAAAT TGTTATCAAA CAGTGACTCA 108823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGAAATGA TCACACAAAA CACAGGCCTT ACCCGCAAAT TGTTATCAAA CAGTGACTCA 241 TTTGTCGAAG CCAGTAATCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 108883 |||||||||| | ||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAAG CTAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 301 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 108943 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTACCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 361 AAGAGTAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 109003 | ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 421 CAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 109063 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 481 ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATA 109112 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATA 530 hqPGS_C01HBa0163B20.1+_SGN-E333032+ (108584 109112) ******************************************************************************** EST sequence 61 +strand 758 n (File: SGN-E332184+) 1 TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 61 CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 121 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 181 TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 241 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 301 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 361 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 421 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 481 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 541 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 601 CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 661 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC CAAACTGCAA ATTGATTGTG 721 AGGAAACAGG TCCTAATCAA GCTGCATGAT CACTGCTC Predicted gene structure (within gDNA segment 108058 to 110028): Exon 1 108658 109418 ( 761 n); cDNA 1 758 ( 758 n); score: 0.982 MATCH C01HBa0163B20.1+ SGN-E332184+ 0.982 761 1.004 C PGS_C01HBa0163B20.1+_SGN-E332184+ (108658 109418) Alignment (genomic DNA sequence = upper lines): TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC 108717 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 60 CACTCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC 108777 ||| |||||| |||||||||| |||||||||| |||||||||| | ||| |||| |||||||||| CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 120 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG 108837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 180 TAATCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTGCCAGTGG 108897 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 240 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAAGA GTAGTCCAAC 108957 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 300 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTCAAA TCGAAAAGAA 109017 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 360 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 109077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 420 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 109137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 480 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 109197 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 540 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 109257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 600 CCAAGACACG TTATATGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 109317 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 660 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC CAAAACTGCA AATTGATTGT 109377 |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC C-AAACTGCA AATTGATTGT 719 GAGGAAACCA GGTCCTAATC AAGCTTGCAT GATCACTGCT C 109418 ||||||| || |||||||||| |||| ||||| |||||||||| | GAGGAAA-CA GGTCCTAATC AAGC-TGCAT GATCACTGCT C 758 hqPGS_C01HBa0163B20.1+_SGN-E332184+ (108658 109418) ******************************************************************************** EST sequence 58 +strand 756 n (File: SGN-E331978+) 1 TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 61 CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 121 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 181 TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 241 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 301 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 361 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 421 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 481 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 541 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 601 CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 661 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC AAAACTGCAA ATTGATTGTG 721 AGGAAACCAG GTCCTAATCA AGCTTGCATG ATCACT Predicted gene structure (within gDNA segment 108058 to 110024): Exon 1 108658 109414 ( 757 n); cDNA 1 756 ( 756 n); score: 0.984 MATCH C01HBa0163B20.1+ SGN-E331978+ 0.984 757 1.001 C PGS_C01HBa0163B20.1+_SGN-E331978+ (108658 109414) Alignment (genomic DNA sequence = upper lines): TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGCAC 108717 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || TGGTTTCACC AAATCAGAAT ACAGTGCAAC CCGTGACGAA ATGATGAAGC TAATGAGTAC 60 CACTCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AGCTTCGGTG AAATGATCAC 108777 ||| |||||| |||||||||| |||||||||| |||||||||| | ||| |||| |||||||||| CACCCGGGAG CTGAGTAGCA ATGCTCTTTC CATGGTCAAC AACTTTGGTG AAATGATCAC 120 ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCCAG 108837 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ACAAAACACA GGCCTTACCC GCAAATTGTT ATCAAACAGT GACTCATTTG TCGAAGCTAG 180 TAATCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTGCCAGTGG 108897 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TAACCGTAAG CTCCTTCAAA TTTCTGCCTC CAAGCCTAAT GCTGTGGTTT CTACCAGTGG 240 AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAAGA GTAGTCCAAC 108957 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || | |||||||| AGGCGGACAA TACAAGACCA TTCAGGAAGC ACTTCAAGCT GTCCCCAGGA GCAGTCCAAC 300 TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTCAAA TCGAAAAGAA 109017 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TCCTTTCGTT ATCCTGATCA AGGCGGGTAC ATACAAGGAA CACATTGAAA TCGAAAAGAA 360 CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 109077 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGCTAAAT GTTGTGCTTA TTGGTGAAGG CCCAACCAAG ACCATAATCA CCGGTGACCA 420 GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 109137 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCAGTAGTT CCTAACCGTA TATCAACATG GCATACAGCC ACCCTTGGTG TTTGTGGTGA 480 TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 109197 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGTTTCGTT ATGAAGGACA TGGGTATTGA AAACACAGCA GGACCCACAA AAGAACAAGC 540 CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 109257 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTGCATTG AGAATTAATG CTGATAAGGC TGTTCTCTAC AACTGCAATA TCGATGGTTA 600 CCAAGACACG TTATATGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 109317 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAGACACG TTATACGCTC ACTCAGGAAG ACAATTTTAT CGTGATTGTA CCATTACAGG 660 CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTTC CAAAACTGCA AATTGATTGT 109377 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CACCATTGAT TTCTTGTTTG GTGATGCAAG TGCTGTTTT- CAAAACTGCA AATTGATTGT 719 GAGGAAACCA GGTCCTAATC AAGCTTGCAT GATCACT 109414 |||||||||| |||||||||| |||||||||| ||||||| GAGGAAACCA GGTCCTAATC AAGCTTGCAT GATCACT 756 hqPGS_C01HBa0163B20.1+_SGN-E331978+ (108658 109414) ******************************************************************************** EST sequence 75 +strand 643 n (File: SGN-E332171+) 1 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 61 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 121 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 181 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 241 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 301 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 361 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 421 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 481 GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 541 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGANGAAACC 601 AGGTCCTAAT CAAGCTTGCA TGATCACTGC TCAAGGAAGG ATG Predicted gene structure (within gDNA segment 108187 to 110039): Exon 1 108787 109429 ( 643 n); cDNA 1 643 ( 643 n); score: 0.988 MATCH C01HBa0163B20.1+ SGN-E332171+ 0.988 643 1.000 C PGS_C01HBa0163B20.1+_SGN-E332171+ (108787 109429) Alignment (genomic DNA sequence = upper lines): AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCCA GTAATCGTAA 108846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 60 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTGCCAGTG GAGGCGGACA 108906 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 120 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG AGTAGTCCAA CTCCTTTCGT 108966 |||||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 180 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA ATCGAAAAGA ACATGCTAAA 109026 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 240 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 109086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 300 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 109146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 360 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 109206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 420 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 109266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 480 GTTATATGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 109326 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 540 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 109386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGANGAAACC 600 AGGTCCTAAT CAAGCTTGCA TGATCACTGC TCAAGGAAGG ATG 109429 |||||||||| |||||||||| |||||||||| |||||||||| ||| AGGTCCTAAT CAAGCTTGCA TGATCACTGC TCAAGGAAGG ATG 643 hqPGS_C01HBa0163B20.1+_SGN-E332171+ (108787 109429) ******************************************************************************** EST sequence 69 +strand 629 n (File: SGN-E332127+) 1 AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 61 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 121 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 181 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 241 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 301 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 361 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 421 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 481 GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 541 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 601 AGGTCCTAAT CAAGCTTGCA TGATCACTG Predicted gene structure (within gDNA segment 108187 to 110025): Exon 1 108787 109415 ( 629 n); cDNA 1 629 ( 629 n); score: 0.989 MATCH C01HBa0163B20.1+ SGN-E332127+ 0.989 629 1.000 C PGS_C01HBa0163B20.1+_SGN-E332127+ (108787 109415) Alignment (genomic DNA sequence = upper lines): AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCCA GTAATCGTAA 108846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| AGGCCTTACC CGCAAATTGT TATCAAACAG TGACTCATTT GTCGAAGCTA GTAACCGTAA 60 GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTGCCAGTG GAGGCGGACA 108906 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| GCTCCTTCAA ATTTCTGCCT CCAAGCCTAA TGCTGTGGTT TCTACCAGTG GAGGCGGACA 120 ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAAG AGTAGTCCAA CTCCTTTCGT 108966 |||||||||| |||||||||| |||||||||| |||||||| | || ||||||| |||||||||| ATACAAGACC ATTCAGGAAG CACTTCAAGC TGTCCCCAGG AGCAGTCCAA CTCCTTTCGT 180 TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTCAA ATCGAAAAGA ACATGCTAAA 109026 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TATCCTGATC AAGGCGGGTA CATACAAGGA ACACATTGAA ATCGAAAAGA ACATGCTAAA 240 TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 109086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTGTGCTT ATTGGTGAAG GCCCAACCAA GACCATAATC ACCGGTGACC AGGCAGTAGT 300 TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 109146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTAACCGT ATATCAACAT GGCATACAGC CACCCTTGGT GTTTGTGGTG ATGGTTTCGT 360 TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 109206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGAAGGAC ATGGGTATTG AAAACACAGC AGGACCCACA AAAGAACAAG CCGTTGCATT 420 GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 109266 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGAATTAAT GCTGATAAGG CTGTTCTCTA CAACTGCAAT ATCGATGGTT ACCAAGACAC 480 GTTATATGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 109326 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTATACGCT CACTCAGGAA GACAATTTTA TCGTGATTGT ACCATTACAG GCACCATTGA 540 TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 109386 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCTTGTTT GGTGATGCAA GTGCTGTTTT CCAAAACTGC AAATTGATTG TGAGGAAACC 600 AGGTCCTAAT CAAGCTTGCA TGATCACTG 109415 |||||||||| |||||||||| ||||||||| AGGTCCTAAT CAAGCTTGCA TGATCACTG 629 hqPGS_C01HBa0163B20.1+_SGN-E332127+ (108787 109415) ******************************************************************************** EST sequence 35 +strand 967 n (File: SGN-E378571+) 1 TTTGTCGAAG CCAGTAACCG TCAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 61 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 121 AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 181 GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 241 ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 301 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 361 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 421 AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 481 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 541 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 601 AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 661 CCAGCACTCA CTAGCGCCAA TCCACCANGT CAAGTCTATC TTGGACGTCC ATGGAAGGAG 721 TTTTCCAAGA CCATCATAAT GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG 781 TCACCATGGA ACACAACTGA TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC 841 AGAGGACCAG GTGCTGCACT TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCCAAAGGAT 901 ATTTCAGGAG ACGTTATTAA CAGCTTCACT GCCGGTAAAT TCATTAATAC ACACAGCCAT 961 GGTTACC Predicted gene structure (within gDNA segment 108224 to 110526): Exon 1 108824 109791 ( 968 n); cDNA 1 967 ( 967 n); score: 0.977 MATCH C01HBa0163B20.1+ SGN-E378571+ 0.977 968 1.001 C PGS_C01HBa0163B20.1+_SGN-E378571+ (108824 109791) Alignment (genomic DNA sequence = upper lines): TTTGTCGAAG CCAGTAATCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 108883 |||||||||| ||||||| || | |||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAAG CCAGTAACCG TCAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 60 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 108943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 120 AAGAGTAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 109003 | ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 180 CAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 109063 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 240 ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 109123 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 300 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 109183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 360 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC 109243 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| |||||||||| ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 420 AATATCGATG GTTACCAAGA CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT 109303 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 480 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 109363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 540 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 109423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 600 AGGATGAGAA AAGATTCCTT AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT 109483 |||||||||| |||||||||| ||| |||| |||||||| | |||||||||| |||||||||| AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 660 AAAGCACTCA CTAGCGCCAA TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG 109543 |||||||| |||||||||| ||||||| ||||||||| |||||||||| |||||||||| CCAGCACTCA CTAGCGCCAA TCCACCANGT CAAGTCTATC TTGGACGTCC ATGGAAGGAG 720 TTTTCCAAGA CCATCATAAT GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG 109603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTCCAAGA CCATCATAAT GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG 780 TCACCATGGA ACACAACTGA TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC 109663 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCACCATGGA ACACAACTGA TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC 840 AGAGGACCAG GTGCTGCACT TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT 109723 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| AGAGGACCAG GTGCTGCACT TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCCAAAGGAT 900 ATTTCAGGAG ACGTTATTAA CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA 109783 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| ATTTCAGGAG ACGTTATTAA CAGCTTCACT GCCGGTAAAT TCATTAATAC AC-ACAGCCA 959 TGGTTACC 109791 |||||||| TGGTTACC 967 hqPGS_C01HBa0163B20.1+_SGN-E378571+ (108824 109791) ******************************************************************************** EST sequence 38 +strand 682 n (File: SGN-E374055+) 1 TTTGTCGAAG CCAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 61 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 121 AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 181 GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 241 ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 301 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 361 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 421 AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 481 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 541 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 601 AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 661 CCAGCACTCA CTAGCGCCAA TC Predicted gene structure (within gDNA segment 108224 to 110115): Exon 1 108824 109505 ( 682 n); cDNA 1 682 ( 682 n); score: 0.978 MATCH C01HBa0163B20.1+ SGN-E374055+ 0.978 682 1.000 C PGS_C01HBa0163B20.1+_SGN-E374055+ (108824 109505) Alignment (genomic DNA sequence = upper lines): TTTGTCGAAG CCAGTAATCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 108883 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TTTGTCGAAG CCAGTAACCG TAAGCTCCTT CAAATTTCTG CCTCCAAGCC TAATGCTGTG 60 GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 108943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCTGCCA GTGGAGGCGG ACAATACAAG ACCATTCAGG AAGCACTTCA AGCTGTCCCC 120 AAGAGTAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 109003 | ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAGTC CAACTCCTTT CGTTATCCTG ATCAAGGCGG GTACATACAA GGAACACATT 180 CAAATCGAAA AGAACATGCT AAATGTTGTG CTTATTGGTG AAGGCCCAAC CAAGACCATA 109063 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| GAAATCGAAA AGAACATGCT AAATGTTGTG TTTATTGGTG AAGGCCCAAC CAAGACCATA 240 ATCACCGGTG ACCAGGCAGT AGTTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 109123 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| ATCACCGGTG ACCAGGCAGT AATTCCTAAC CGTATATCAA CATGGCATAC AGCCACCCTT 300 GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 109183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTGTTTGTG GTGATGGTTT CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC 360 ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC 109243 |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| |||||||||| ACAAAAGAAC AAGCCGTTGC ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC 420 AATATCGATG GTTACCAAGA CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT 109303 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AATATCGATG GTTACCAAGA CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT 480 TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 109363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTACCATTA CAGGCACCAT TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC 540 TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 109423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAAATTGA TTGTGAGGAA ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA 600 AGGATGAGAA AAGATTCCTT AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT 109483 |||||||||| |||||||||| ||| |||| |||||||| | |||||||||| |||||||||| AGGATGAGAA AAGATTCCTT TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT 660 AAAGCACTCA CTAGCGCCAA TC 109505 |||||||| |||||||||| || CCAGCACTCA CTAGCGCCAA TC 682 hqPGS_C01HBa0163B20.1+_SGN-E374055+ (108824 109505) ******************************************************************************** EST sequence 214 -strand 772 n (File: SGN-E547511-) 1 CGTTATGAAG GACATGGGTA TGAAAACACA GCAGGACCCA CAAAAGAACA AGCCGTTGCA 61 TTGAGAATTA ATGCCGATAG GGCTGTTCTC TACAACTGCA ATATCGATGG TTACCAAGAC 121 ACGTTATACG CTCACTCAGG AAGACAATTT TATCGTGATT GTACCATTAC AGGCACCATT 181 GATTTCTTGT TTGGTGATGC AAGTGCTGTT TTCCAAAACT GCAAATTGAT TGTGAGGAAA 241 CCAGGTCCTA ATCAAGCTTG CATGATCACT GCTCAAGGAA GGATGAGAAA AGATTCCTTT 301 GGTACATTCG TTATCCAGAA TTGTGACATC AAGGCTGATC CAGCACTCAC TAGCGCCAAT 361 CCACCAGTCA AAGTCTATCT TGGACGTCCA TGGAAGGAGT TTTCCAAGAC CATCATAATG 421 CAATCAAACA TCGATGGATT CGTCGATCCA TCAGGATGGT CACCATGGAA CACAACTGAT 481 TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG TGCTGCACTT 541 GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA CGTTATTAAC 601 AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAGT GTTTGATATT 661 CCCTATGAAG CTGGCATGAT GAAGAGTGTA ATTGCATATA CCATTCNACC CTGTAATTTT 721 TTCTAATTAT TCANAAATTA TATTTCCTAA AAAAAAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 108534 to 111308): Exon 1 109144 109889 ( 746 n); cDNA 1 748 ( 748 n); score: 0.973 PPA cDNA 749 772 MATCH C01HBa0163B20.1+ SGN-E547511- 0.973 746 0.966 C PGS_C01HBa0163B20.1+_SGN-E547511- (109144 109889) Alignment (genomic DNA sequence = upper lines): CGTTATGAAG GACATGGGTA TTGAAAACAC AGCAGGACCC ACAAAAGAAC AAGCCGTTGC 109203 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CGTTATGAAG GACATGGGTA -TGAAAACAC AGCAGGACCC ACAAAAGAAC AAGCCGTTGC 59 ATTGAGAATT AATGCTGATA AGGCTGTTCT CTACAACTGC AATATCGATG GTTACCAAGA 109263 |||||||||| ||||| |||| ||||||||| |||||||||| |||||||||| |||||||||| ATTGAGAATT AATGCCGATA GGGCTGTTCT CTACAACTGC AATATCGATG GTTACCAAGA 119 CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 109323 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 179 TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 109383 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 239 ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 109443 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 299 AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT AAAGCACTCA CTAGCGCCAA 109503 ||| |||| |||||||| | |||||||||| |||||||||| |||||||| |||||||||| TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT CCAGCACTCA CTAGCGCCAA 359 TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG TTTTCCAAGA CCATCATAAT 109563 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG TTTTCCAAGA CCATCATAAT 419 GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 109623 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 479 TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 109683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 539 TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 109743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 599 CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAA TGTTTGATAT 109803 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAG TGTTTGATAT 659 TCCCTATGAA GCTGGCATGA TGAAG-GTGT AATTACATAT ACCATTC-AT CCTGTAATTT 109861 |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||| | |||||||||| TCCCTATGAA GCTGGCATGA TGAAGAGTGT AATTGCATAT ACCATTCNAC CCTGTAATTT 719 TTTCTAATTA TTCA-AAATT ATATTTCCT 109889 |||||||||| |||| ||||| ||||||||| TTTCTAATTA TTCANAAATT ATATTTCCT 748 hqPGS_C01HBa0163B20.1+_SGN-E547511- (109144 109889) ******************************************************************************** EST sequence 233 -strand 731 n (File: SGN-E374054-) 1 AAACACAGCA GGACCCACAA AAGAACAAGC CGTTGCATTG AGAATTAATG CCGATAGGGC 61 TGTTCTCTAC AACTGCAATA TCGATGGTTA CCAAGACACG TTATACGCTC ACTCAGGAAG 121 ACAATTTTAT CGTGATTGTA CCATTACAGG CACCATTGAT TTCTTGTTTG GTGATGCAAG 181 TGCTGTTTTC CAAAACTGCA AATTGATTGT GAGGAAACCA GGTCCTAATC AAGCTTGCAT 241 GATCACTGCT CAAGGAAGGA TGAGAAAAGA TTCCTTTGGT ACATTCGTTA TCCAGAATTG 301 TGACATCAAG GCTGATCCAG CACTCACTAG CGCCAATCCA CCAGTCAAAG TCTATCTTGG 361 ACGTCCATGG AAGGAGTTTT CCAAGACCAT CATAATGCAA TCAAACATCG ATGGATTCGT 421 CGATCCATCA GGATGGTCAC CATGGAACAC AACTGATTTT GGAATACACA CATGTTTTTA 481 TGCAGAGTAT CAGAACAGAG GACCAGGTGC TGCACTTGAC AAAAGAGTCT CCACATGGAG 541 AGGTTACCAA AAGGATATTT CAGGAGACGT TATTAACAGC TTCACTGCCG GTAAATTCAT 601 TAATACACAA CAGCCATGGT TACCAGTGTT TGATATTCCC TATGAAGCTG GCATGATGAA 661 GGTGTAATTG CATATACCAT TCACCCTGTA ATTTTTTCTA ATTATTCAAA ATTATATTTC 721 CTAAAAAAAA A Predicted gene structure (within gDNA segment 108558 to 110570): Exon 1 109168 109889 ( 722 n); cDNA 1 722 ( 722 n); score: 0.983 MATCH C01HBa0163B20.1+ SGN-E374054- 0.983 722 0.988 C PGS_C01HBa0163B20.1+_SGN-E374054- (109168 109889) Alignment (genomic DNA sequence = upper lines): AAACACAGCA GGACCCACAA AAGAACAAGC CGTTGCATTG AGAATTAATG CTGATAAGGC 109227 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| AAACACAGCA GGACCCACAA AAGAACAAGC CGTTGCATTG AGAATTAATG CCGATAGGGC 60 TGTTCTCTAC AACTGCAATA TCGATGGTTA CCAAGACACG TTATATGCTC ACTCAGGAAG 109287 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TGTTCTCTAC AACTGCAATA TCGATGGTTA CCAAGACACG TTATACGCTC ACTCAGGAAG 120 ACAATTTTAT CGTGATTGTA CCATTACAGG CACCATTGAT TTCTTGTTTG GTGATGCAAG 109347 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAATTTTAT CGTGATTGTA CCATTACAGG CACCATTGAT TTCTTGTTTG GTGATGCAAG 180 TGCTGTTTTC CAAAACTGCA AATTGATTGT GAGGAAACCA GGTCCTAATC AAGCTTGCAT 109407 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGTTTTC CAAAACTGCA AATTGATTGT GAGGAAACCA GGTCCTAATC AAGCTTGCAT 240 GATCACTGCT CAAGGAAGGA TGAGAAAAGA TTCCTTAGGT GGATTCGTTA TCCAAAATTG 109467 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| |||| ||||| GATCACTGCT CAAGGAAGGA TGAGAAAAGA TTCCTTTGGT ACATTCGTTA TCCAGAATTG 300 TGACATCAAG GCTGATAAAG CACTCACTAG CGCCAATCCA CCAGTCAAAG TCTATCTTGG 109527 |||||||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||||| TGACATCAAG GCTGATCCAG CACTCACTAG CGCCAATCCA CCAGTCAAAG TCTATCTTGG 360 ACGTCCATGG AAGGAGTTTT CCAAGACCAT CATAATGCAA TCAAACATCG ATGGATTCGT 109587 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGTCCATGG AAGGAGTTTT CCAAGACCAT CATAATGCAA TCAAACATCG ATGGATTCGT 420 CGATCCATCA GGATGGTCAC CATGGAACAC AACTGATTTT GGAATACACA CATGTTTTTA 109647 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATCCATCA GGATGGTCAC CATGGAACAC AACTGATTTT GGAATACACA CATGTTTTTA 480 TGCAGAGTAT CAGAACAGAG GACCAGGTGC TGCACTTGAC AAAAGAGTCT CCACATGGAG 109707 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCAGAGTAT CAGAACAGAG GACCAGGTGC TGCACTTGAC AAAAGAGTCT CCACATGGAG 540 AGGTTACCAA AAGGATATTT CAGGAGACGT TATTAACAGC TTCACTGCCG GTAAATTCAT 109767 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGTTACCAA AAGGATATTT CAGGAGACGT TATTAACAGC TTCACTGCCG GTAAATTCAT 600 TAATACACAA CAGCCATGGT TACCAATGTT TGATATTCCC TATGAAGCTG GCATGATGAA 109827 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| TAATACACAA CAGCCATGGT TACCAGTGTT TGATATTCCC TATGAAGCTG GCATGATGAA 660 GGTGTAATTA CATATACCAT TCATCCTGTA ATTTTTTCTA ATTATTCAAA ATTATATTTC 109887 ||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| GGTGTAATTG CATATACCAT TCACCCTGTA ATTTTTTCTA ATTATTCAAA ATTATATTTC 720 CT 109889 || CT 722 hqPGS_C01HBa0163B20.1+_SGN-E374054- (109168 109889) ******************************************************************************** EST sequence 284 -strand 702 n (File: SGN-E549438-) 1 TTGCATTGAG AATTAATGCC GATAGGGCTG TTCTCTACAA CTGCAATATC GATGGTTACC 61 AAGACACGTT ATACGCTCAC TCAGGAAGAC AATTTTATCG TGATTGTACC ATTACAGGCA 121 CCATTGATTT CTTGTTTGGT GATGCAAGTG CTGTTTTCCA AAACTGCAAA TTGATTGTGA 181 GGAAACCAGG TCCTAATCAA GCTTGCATGA TCACTGCTCA AGGAAGGATG AGAAAAGATT 241 CCTTTGGTAC ATTCGTTATC CAGAATTGTG ACATCAAGGC TGATCCAGCA CTCACTAGCG 301 CCAATCCACC AGTCAAAGTC TATCTTGGAC GTCCATGGAA GGAGTTTTCC AAGACCATCA 361 TAATGCAATC AAACATCGAT GGATTCGTCG ATCCATCAGG ATGGTCACCA TGGAACACAA 421 CTGATTTTGG AATACACACA TGTTTTTATG CAGAGTATCA GAACAGAGGA CCAGGTGCTG 481 CACTTGACAA AAGAGTCTCC ACATGGAGAG GTTACCAAAA GGATATTTCA GGAGACGTTA 541 TTAACAGCTT CACTGCCGGT AAATTCATTA ATACACAACA GCCATGGTTA CCAGTGTTTG 601 ATATTCCCTA TGAAGCTGGC ATGATGAAGG TGTAATTGCA TATACCATTC ACCCCTGTAA 661 TTTTTTCTAA TTATTCAAAA TTATATTTCC TAAAAAAAAA AA Predicted gene structure (within gDNA segment 108590 to 110590): Exon 1 109200 109889 ( 690 n); cDNA 1 691 ( 691 n); score: 0.979 PPA cDNA 692 702 MATCH C01HBa0163B20.1+ SGN-E549438- 0.979 690 0.983 C PGS_C01HBa0163B20.1+_SGN-E549438- (109200 109889) Alignment (genomic DNA sequence = upper lines): TTGCATTGAG AATTAATGCT GATAAGGCTG TTCTCTACAA CTGCAATATC GATGGTTACC 109259 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| TTGCATTGAG AATTAATGCC GATAGGGCTG TTCTCTACAA CTGCAATATC GATGGTTACC 60 AAGACACGTT ATATGCTCAC TCAGGAAGAC AATTTTATCG TGATTGTACC ATTACAGGCA 109319 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGACACGTT ATACGCTCAC TCAGGAAGAC AATTTTATCG TGATTGTACC ATTACAGGCA 120 CCATTGATTT CTTGTTTGGT GATGCAAGTG CTGTTTTCCA AAACTGCAAA TTGATTGTGA 109379 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATTGATTT CTTGTTTGGT GATGCAAGTG CTGTTTTCCA AAACTGCAAA TTGATTGTGA 180 GGAAACCAGG TCCTAATCAA GCTTGCATGA TCACTGCTCA AGGAAGGATG AGAAAAGATT 109439 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAACCAGG TCCTAATCAA GCTTGCATGA TCACTGCTCA AGGAAGGATG AGAAAAGATT 240 CCTTAGGTGG ATTCGTTATC CAAAATTGTG ACATCAAGGC TGATAAAGCA CTCACTAGCG 109499 |||| ||| |||||||||| || ||||||| |||||||||| |||| |||| |||||||||| CCTTTGGTAC ATTCGTTATC CAGAATTGTG ACATCAAGGC TGATCCAGCA CTCACTAGCG 300 CCAATCCACC AGTCAAAGTC TATCTTGGAC GTCCATGGAA GGAGTTTTCC AAGACCATCA 109559 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAATCCACC AGTCAAAGTC TATCTTGGAC GTCCATGGAA GGAGTTTTCC AAGACCATCA 360 TAATGCAATC AAACATCGAT GGATTCGTCG ATCCATCAGG ATGGTCACCA TGGAACACAA 109619 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATGCAATC AAACATCGAT GGATTCGTCG ATCCATCAGG ATGGTCACCA TGGAACACAA 420 CTGATTTTGG AATACACACA TGTTTTTATG CAGAGTATCA GAACAGAGGA CCAGGTGCTG 109679 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGATTTTGG AATACACACA TGTTTTTATG CAGAGTATCA GAACAGAGGA CCAGGTGCTG 480 CACTTGACAA AAGAGTCTCC ACATGGAGAG GTTACCAAAA GGATATTTCA GGAGACGTTA 109739 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACTTGACAA AAGAGTCTCC ACATGGAGAG GTTACCAAAA GGATATTTCA GGAGACGTTA 540 TTAACAGCTT CACTGCCGGT AAATTCATTA ATACACAACA GCCATGGTTA CCAATGTTTG 109799 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| TTAACAGCTT CACTGCCGGT AAATTCATTA ATACACAACA GCCATGGTTA CCAGTGTTTG 600 ATATTCCCTA TGAAGCTGGC ATGATGAAGG TGTAATTACA TATACCATTC A-TCCTGTAA 109858 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| | ||||||| ATATTCCCTA TGAAGCTGGC ATGATGAAGG TGTAATTGCA TATACCATTC ACCCCTGTAA 660 TTTTTTCTAA TTATTCAAAA TTATATTTCC T 109889 |||||||||| |||||||||| |||||||||| | TTTTTTCTAA TTATTCAAAA TTATATTTCC T 691 hqPGS_C01HBa0163B20.1+_SGN-E549438- (109200 109889) ******************************************************************************** EST sequence 236 -strand 649 n (File: SGN-E374063-) 1 CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 61 TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 121 ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 181 TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT CCAGCACTCA CTAGCGCCAA 241 TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGAAAGGAG TTTTCCAAGA CCATCATAAT 301 GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 361 TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 421 TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 481 CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAG TGTTTGATAT 541 TCCCTATGAA GCTGGCATGA TGAAGGTGTA ATTGCATATA CCATTCACCC TGTAATTTTT 601 TCTAATTATT CAAAATTATA TTTCCTATTT CCTTTGTATA AAAAAAAAA Predicted gene structure (within gDNA segment 108564 to 110620): Exon 1 109264 109889 ( 626 n); cDNA 1 626 ( 626 n); score: 0.982 PPA cDNA 638 649 MATCH C01HBa0163B20.1+ SGN-E374063- 0.982 626 0.965 C PGS_C01HBa0163B20.1+_SGN-E374063- (109264 109889) Alignment (genomic DNA sequence = upper lines): CACGTTATAT GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 109323 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACGTTATAC GCTCACTCAG GAAGACAATT TTATCGTGAT TGTACCATTA CAGGCACCAT 60 TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 109383 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTTCTTG TTTGGTGATG CAAGTGCTGT TTTCCAAAAC TGCAAATTGA TTGTGAGGAA 120 ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 109443 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGGTCCT AATCAAGCTT GCATGATCAC TGCTCAAGGA AGGATGAGAA AAGATTCCTT 180 AGGTGGATTC GTTATCCAAA ATTGTGACAT CAAGGCTGAT AAAGCACTCA CTAGCGCCAA 109503 ||| |||| |||||||| | |||||||||| |||||||||| |||||||| |||||||||| TGGTACATTC GTTATCCAGA ATTGTGACAT CAAGGCTGAT CCAGCACTCA CTAGCGCCAA 240 TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGGAAGGAG TTTTCCAAGA CCATCATAAT 109563 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TCCACCAGTC AAAGTCTATC TTGGACGTCC ATGAAAGGAG TTTTCCAAGA CCATCATAAT 300 GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 109623 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAATCAAAC ATCGATGGAT TCGTCGATCC ATCAGGATGG TCACCATGGA ACACAACTGA 360 TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 109683 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTGGAATA CACACATGTT TTTATGCAGA GTATCAGAAC AGAGGACCAG GTGCTGCACT 420 TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 109743 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACAAAAGA GTCTCCACAT GGAGAGGTTA CCAAAAGGAT ATTTCAGGAG ACGTTATTAA 480 CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAA TGTTTGATAT 109803 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CAGCTTCACT GCCGGTAAAT TCATTAATAC ACAACAGCCA TGGTTACCAG TGTTTGATAT 540 TCCCTATGAA GCTGGCATGA TGAAGGTGTA ATTACATATA CCATTCATCC TGTAATTTTT 109863 |||||||||| |||||||||| |||||||||| ||| |||||| ||||||| || |||||||||| TCCCTATGAA GCTGGCATGA TGAAGGTGTA ATTGCATATA CCATTCACCC TGTAATTTTT 600 TCTAATTATT CAAAATTATA TTTCCT 109889 |||||||||| |||||||||| |||||| TCTAATTATT CAAAATTATA TTTCCT 626 hqPGS_C01HBa0163B20.1+_SGN-E374063- (109264 109889) ******************************************************************************** EST sequence 242 -strand 471 n (File: SGN-E226303-) 1 TCGTTATCCA GAATTGTGAC ATCAAGGCTG ATAAAGCACT CACTAGCGCC AATCCACCAG 61 TCAAAGTCTA TCTTGGACGT CCATGGAAGG AGTTTTCCAA GACCATCATA ATGCAATCAA 121 ACATCGATGG ATTCGTCGAT CCATCAGGAT GGTCCCCATG GAACCCAACT GATTTTGGAA 181 TACACACATG TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA 241 GAGTCTCCAC ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCC 301 CTGCCGGTAA ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG 361 AAGCTGGCAT GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA 421 TTCAAAATTA TATTTCCTAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 108743 to 110810): Exon 1 109452 109889 ( 438 n); cDNA 1 438 ( 438 n); score: 0.991 PPA cDNA 439 471 MATCH C01HBa0163B20.1+ SGN-E226303- 0.991 438 0.930 C PGS_C01HBa0163B20.1+_SGN-E226303- (109452 109889) Alignment (genomic DNA sequence = upper lines): TCGTTATCCA AAATTGTGAC ATCAAGGCTG ATAAAGCACT CACTAGCGCC AATCCACCAG 109511 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTTATCCA GAATTGTGAC ATCAAGGCTG ATAAAGCACT CACTAGCGCC AATCCACCAG 60 TCAAAGTCTA TCTTGGACGT CCATGGAAGG AGTTTTCCAA GACCATCATA ATGCAATCAA 109571 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAAGTCTA TCTTGGACGT CCATGGAAGG AGTTTTCCAA GACCATCATA ATGCAATCAA 120 ACATCGATGG ATTCGTCGAT CCATCAGGAT GGTCACCATG GAACACAACT GATTTTGGAA 109631 |||||||||| |||||||||| |||||||||| |||| ||||| |||| ||||| |||||||||| ACATCGATGG ATTCGTCGAT CCATCAGGAT GGTCCCCATG GAACCCAACT GATTTTGGAA 180 TACACACATG TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA 109691 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACACATG TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA 240 GAGTCTCCAC ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCA 109751 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| GAGTCTCCAC ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCC 300 CTGCCGGTAA ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG 109811 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCCGGTAA ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG 360 AAGCTGGCAT GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA 109871 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGCTGGCAT GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA 420 TTCAAAATTA TATTTCCT 109889 |||||||||| |||||||| TTCAAAATTA TATTTCCT 438 hqPGS_C01HBa0163B20.1+_SGN-E226303- (109452 109889) ******************************************************************************** EST sequence 245 -strand 442 n (File: SGN-E226674-) 1 TAAAGCACTC ACTAGCGCCA ATCCACCAGT CAAAGTCTAT CTTGGACGTC CATGGAAGGA 61 GTTTTCCAAG ACCATCATAA TGCAATCAAA CATCGATGGA TTCGTCGATC CATCAGGATG 121 GTCACCATGG AACACAACTG ATTTTGGAAT ACACACATGT TTTTATGCAG AGTATCAGAA 181 CAGAGGACCA GGTGCTGCAC TTGACAAAAG AGTCTCCACA TGGAGAGGTT ACCAAAAGGA 241 TATTTCAGGA GACGTTATTA ACAGCTTCAC TGCCGGTAAA TTCATTAATA CACAACAGCC 301 ATGGTTACCA ATGTTTGATA TTCCCTATGA AGCTGGCATG ATGAAGGTGT AATTACATAT 361 ACCATTCATC CTGTAATTTT TTCTAATTAT TCAAAATTAT ATTTCCTAAA AAAAAAAAAA 421 AAAAAAAAAA AAAAAAAAAA AC Predicted gene structure (within gDNA segment 108873 to 110830): Exon 1 109483 109889 ( 407 n); cDNA 1 407 ( 407 n); score: 1.000 PPA cDNA 408 442 MATCH C01HBa0163B20.1+ SGN-E226674- 1.000 407 0.921 C PGS_C01HBa0163B20.1+_SGN-E226674- (109483 109889) Alignment (genomic DNA sequence = upper lines): TAAAGCACTC ACTAGCGCCA ATCCACCAGT CAAAGTCTAT CTTGGACGTC CATGGAAGGA 109542 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAGCACTC ACTAGCGCCA ATCCACCAGT CAAAGTCTAT CTTGGACGTC CATGGAAGGA 60 GTTTTCCAAG ACCATCATAA TGCAATCAAA CATCGATGGA TTCGTCGATC CATCAGGATG 109602 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTTCCAAG ACCATCATAA TGCAATCAAA CATCGATGGA TTCGTCGATC CATCAGGATG 120 GTCACCATGG AACACAACTG ATTTTGGAAT ACACACATGT TTTTATGCAG AGTATCAGAA 109662 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCACCATGG AACACAACTG ATTTTGGAAT ACACACATGT TTTTATGCAG AGTATCAGAA 180 CAGAGGACCA GGTGCTGCAC TTGACAAAAG AGTCTCCACA TGGAGAGGTT ACCAAAAGGA 109722 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGAGGACCA GGTGCTGCAC TTGACAAAAG AGTCTCCACA TGGAGAGGTT ACCAAAAGGA 240 TATTTCAGGA GACGTTATTA ACAGCTTCAC TGCCGGTAAA TTCATTAATA CACAACAGCC 109782 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTTCAGGA GACGTTATTA ACAGCTTCAC TGCCGGTAAA TTCATTAATA CACAACAGCC 300 ATGGTTACCA ATGTTTGATA TTCCCTATGA AGCTGGCATG ATGAAGGTGT AATTACATAT 109842 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGTTACCA ATGTTTGATA TTCCCTATGA AGCTGGCATG ATGAAGGTGT AATTACATAT 360 ACCATTCATC CTGTAATTTT TTCTAATTAT TCAAAATTAT ATTTCCT 109889 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| ACCATTCATC CTGTAATTTT TTCTAATTAT TCAAAATTAT ATTTCCT 407 hqPGS_C01HBa0163B20.1+_SGN-E226674- (109483 109889) ******************************************************************************** EST sequence 279 -strand 399 n (File: SGN-E220264-) 1 CAAAGTCTAT CTTGGACGTC CATGAAAGGA GTTTTCCAAG ACCATCATAA TGCAATCAAA 61 CATCGATGGA TTCGTCGATC CATCAGGATG GTCACCATGG AACACAACTG ATTTTGGAAT 121 ACACACATGT TTTTATGCAG AGTATCAGAA CAGAGGACCA GGTGCTGCAC TTGACAAAAG 181 AGTCTCCACA TGGAGAGGTT ACCAAAAGGA TATTTCAGGA GACGTTATTA ACAGCTTCAC 241 TGCCGGTAAA TTCATTAATA CACAACAGCC ATGGTTACCA ATGTTTGATA TTCCCTATGA 301 AGCTGGCATG ATGAAGGTGT AATTACATAT ACCATTCATC CTGTAATTTT TTCTAATTAT 361 TCAAAATTAT ATTTCCTATT TAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 108903 to 110673): Exon 1 109513 109889 ( 377 n); cDNA 1 377 ( 377 n); score: 0.997 PPA cDNA 382 399 MATCH C01HBa0163B20.1+ SGN-E220264- 0.997 377 0.945 C PGS_C01HBa0163B20.1+_SGN-E220264- (109513 109889) Alignment (genomic DNA sequence = upper lines): CAAAGTCTAT CTTGGACGTC CATGGAAGGA GTTTTCCAAG ACCATCATAA TGCAATCAAA 109572 |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| CAAAGTCTAT CTTGGACGTC CATGAAAGGA GTTTTCCAAG ACCATCATAA TGCAATCAAA 60 CATCGATGGA TTCGTCGATC CATCAGGATG GTCACCATGG AACACAACTG ATTTTGGAAT 109632 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCGATGGA TTCGTCGATC CATCAGGATG GTCACCATGG AACACAACTG ATTTTGGAAT 120 ACACACATGT TTTTATGCAG AGTATCAGAA CAGAGGACCA GGTGCTGCAC TTGACAAAAG 109692 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACACATGT TTTTATGCAG AGTATCAGAA CAGAGGACCA GGTGCTGCAC TTGACAAAAG 180 AGTCTCCACA TGGAGAGGTT ACCAAAAGGA TATTTCAGGA GACGTTATTA ACAGCTTCAC 109752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCTCCACA TGGAGAGGTT ACCAAAAGGA TATTTCAGGA GACGTTATTA ACAGCTTCAC 240 TGCCGGTAAA TTCATTAATA CACAACAGCC ATGGTTACCA ATGTTTGATA TTCCCTATGA 109812 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCCGGTAAA TTCATTAATA CACAACAGCC ATGGTTACCA ATGTTTGATA TTCCCTATGA 300 AGCTGGCATG ATGAAGGTGT AATTACATAT ACCATTCATC CTGTAATTTT TTCTAATTAT 109872 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTGGCATG ATGAAGGTGT AATTACATAT ACCATTCATC CTGTAATTTT TTCTAATTAT 360 TCAAAATTAT ATTTCCT 109889 |||||||||| ||||||| TCAAAATTAT ATTTCCT 377 hqPGS_C01HBa0163B20.1+_SGN-E220264- (109513 109889) ******************************************************************************** EST sequence 224 -strand 352 n (File: SGN-E216887-) 1 CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT CACCATGGAA 61 CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 121 TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 181 CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 241 GTTTGATATT CCCAATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 301 GTAAATTATT CTAATTATTC AAAAAAATAT TTCCTAAAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 108945 to 110938): Exon 1 109555 109889 ( 335 n); cDNA 1 335 ( 335 n); score: 0.982 PPA cDNA 336 352 MATCH C01HBa0163B20.1+ SGN-E216887- 0.982 335 0.952 C PGS_C01HBa0163B20.1+_SGN-E216887- (109555 109889) Alignment (genomic DNA sequence = upper lines): CATCATAATG CAATCAAACA TCGATGGATT CGTCGATCCA TCAGGATGGT CACCATGGAA 109614 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| CATCATAATG CAATCAAACA TCGATGGATT CGTTGATCCA TCAGGATGGT CACCATGGAA 60 CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 109674 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACAACTGAT TTTGGAATAC ACACATGTTT TTATGCAGAG TATCAGAACA GAGGACCAGG 120 TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 109734 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGCTGCACTT GACAAAAGAG TCTCCACATG GAGAGGTTAC CAAAAGGATA TTTCAGGAGA 180 CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 109794 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGTTATTAAC AGCTTCACTG CCGGTAAATT CATTAATACA CAACAGCCAT GGTTACCAAT 240 GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 109854 |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTGATATT CCCAATGAAG CTGGCATGAT GAAGGTGTAA TTACATATAC CATTCATCCT 300 GTAATTTTTT CTAATTATTC AAAATTATAT TTCCT 109889 |||| || || |||||||||| |||| |||| ||||| GTAAATTATT CTAATTATTC AAAAAAATAT TTCCT 335 hqPGS_C01HBa0163B20.1+_SGN-E216887- (109555 109889) ******************************************************************************** EST sequence 276 -strand 330 n (File: SGN-E220168-) 1 TTCGTCGATC CATCAGGATG GTCACCATGG AACACAAACT GATTTTGGAA TACACACATG 61 TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA GAGTCTCCAC 121 ATGGAGAGGT TACCAAAAGG ATATTTCAGG AAACGTTATT AACAGCTTCA CTGCCGGTAA 181 ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG AAGCTGGCAT 241 GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA TTCAAAATTA 301 TATTTCCTAT TTAAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 108973 to 110673): Exon 1 109583 109889 ( 307 n); cDNA 1 308 ( 308 n); score: 0.989 PPA cDNA 313 330 MATCH C01HBa0163B20.1+ SGN-E220168- 0.989 307 0.930 C PGS_C01HBa0163B20.1+_SGN-E220168- (109583 109889) Alignment (genomic DNA sequence = upper lines): TTCGTCGATC CATCAGGATG GTCACCATGG AACAC-AACT GATTTTGGAA TACACACATG 109641 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TTCGTCGATC CATCAGGATG GTCACCATGG AACACAAACT GATTTTGGAA TACACACATG 60 TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA GAGTCTCCAC 109701 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTATGCA GAGTATCAGA ACAGAGGACC AGGTGCTGCA CTTGACAAAA GAGTCTCCAC 120 ATGGAGAGGT TACCAAAAGG ATATTTCAGG AGACGTTATT AACAGCTTCA CTGCCGGTAA 109761 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| ATGGAGAGGT TACCAAAAGG ATATTTCAGG AAACGTTATT AACAGCTTCA CTGCCGGTAA 180 ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG AAGCTGGCAT 109821 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCATTAAT ACACAACAGC CATGGTTACC AATGTTTGAT ATTCCCTATG AAGCTGGCAT 240 GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA TTCAAAATTA 109881 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGAAGGTG TAATTACATA TACCATTCAT CCTGTAATTT TTTCTAATTA TTCAAAATTA 300 TATTTCCT 109889 |||||||| TATTTCCT 308 hqPGS_C01HBa0163B20.1+_SGN-E220168- (109583 109889) ******************************************************************************** EST sequence 251 -strand 321 n (File: SGN-E224767-) 1 CCCCATGGAA CCCAACTGAT TTTGGAATAC ACCCATGTTT TTATGCAGAG TATCAGAACA 61 GAGGACCAGG TGCTGCACTT GCCAAAAGAG TCTCCACATG GAGAGGTTCC CAAAAGGATA 121 TTTCAGGAGA CGTTATTAAC AGCTTCCCTG CCGGTAAATT CATTAATACC CCCCAGCCAT 181 GGTTACCAAT GTTTGATATT CCCTATGAAG CTGGCATGAT GAAGGTGTAA TTACATATCC 241 CATTCATCCT GTAATTTTTT CTAATTATTC AAAATTACCT TTCCTAAAAA AAAAAAAACC 301 CAAAAAAAAA AAAAAAAAAA A Predicted gene structure (within gDNA segment 108887 to 110921): Exon 1 109607 109889 ( 283 n); cDNA 3 285 ( 283 n); score: 0.961 PPA cDNA 286 299 MATCH C01HBa0163B20.1+ SGN-E224767- 0.961 283 0.882 C PGS_C01HBa0163B20.1+_SGN-E224767- (109607 109889) Alignment (genomic DNA sequence = upper lines): CCATGGAACA CAACTGATTT TGGAATACAC ACATGTTTTT ATGCAGAGTA TCAGAACAGA 109666 ||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CCATGGAACC CAACTGATTT TGGAATACAC CCATGTTTTT ATGCAGAGTA TCAGAACAGA 62 GGACCAGGTG CTGCACTTGA CAAAAGAGTC TCCACATGGA GAGGTTACCA AAAGGATATT 109726 |||||||||| ||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GGACCAGGTG CTGCACTTGC CAAAAGAGTC TCCACATGGA GAGGTTCCCA AAAGGATATT 122 TCAGGAGACG TTATTAACAG CTTCACTGCC GGTAAATTCA TTAATACACA ACAGCCATGG 109786 |||||||||| |||||||||| |||| ||||| |||||||||| ||||||| | ||||||||| TCAGGAGACG TTATTAACAG CTTCCCTGCC GGTAAATTCA TTAATACCCC CCAGCCATGG 182 TTACCAATGT TTGATATTCC CTATGAAGCT GGCATGATGA AGGTGTAATT ACATATACCA 109846 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| TTACCAATGT TTGATATTCC CTATGAAGCT GGCATGATGA AGGTGTAATT ACATATCCCA 242 TTCATCCTGT AATTTTTTCT AATTATTCAA AATTATATTT CCT 109889 |||||||||| |||||||||| |||||||||| ||||| ||| ||| TTCATCCTGT AATTTTTTCT AATTATTCAA AATTACCTTT CCT 285 hqPGS_C01HBa0163B20.1+_SGN-E224767- (109607 109889) ******************************************************************************** EST sequence 249 -strand 305 n (File: SGN-E224547-) 1 TGATTTTGGA ATACACACAT GTTTTTATGC AGAGTATCAG AACAGAGGGC CAGGTGTTGC 61 ACTTGACAAA AGAGTCTCCA CATGGAGAGG TTTCCAAAAG GATATTTCAG GAGACGTTAT 121 TAACAGCTTC ACTGCCGGTA AATTCATTAA TACACAACAG CCATGGTTAC CAATGTTTGA 181 TATTCCCTAT GAAGCTGGCA TGATGAAGGT GTAATTACAT ATACCATTCA TCCTGTAATT 241 TTTTCTAATT ATTCAAAATT ATCTTTCCTA GAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 301 AAAAA Predicted gene structure (within gDNA segment 109011 to 110912): Exon 1 109621 109889 ( 269 n); cDNA 1 269 ( 269 n); score: 0.985 PPA cDNA 270 305 MATCH C01HBa0163B20.1+ SGN-E224547- 0.985 269 0.882 C PGS_C01HBa0163B20.1+_SGN-E224547- (109621 109889) Alignment (genomic DNA sequence = upper lines): TGATTTTGGA ATACACACAT GTTTTTATGC AGAGTATCAG AACAGAGGAC CAGGTGCTGC 109680 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||||| ||| TGATTTTGGA ATACACACAT GTTTTTATGC AGAGTATCAG AACAGAGGGC CAGGTGTTGC 60 ACTTGACAAA AGAGTCTCCA CATGGAGAGG TTACCAAAAG GATATTTCAG GAGACGTTAT 109740 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| ACTTGACAAA AGAGTCTCCA CATGGAGAGG TTTCCAAAAG GATATTTCAG GAGACGTTAT 120 TAACAGCTTC ACTGCCGGTA AATTCATTAA TACACAACAG CCATGGTTAC CAATGTTTGA 109800 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAACAGCTTC ACTGCCGGTA AATTCATTAA TACACAACAG CCATGGTTAC CAATGTTTGA 180 TATTCCCTAT GAAGCTGGCA TGATGAAGGT GTAATTACAT ATACCATTCA TCCTGTAATT 109860 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTCCCTAT GAAGCTGGCA TGATGAAGGT GTAATTACAT ATACCATTCA TCCTGTAATT 240 TTTTCTAATT ATTCAAAATT ATATTTCCT 109889 |||||||||| |||||||||| || |||||| TTTTCTAATT ATTCAAAATT ATCTTTCCT 269 hqPGS_C01HBa0163B20.1+_SGN-E224547- (109621 109889) ******************************************************************************** EST sequence 48 +strand 800 n (File: SGN-E542167+) 1 CCTCGTGCCG TCTAAGCTAG TTTTTGAAGT ATGAGTTTGG CTCAAAGCCT AATTTTAAAT 61 AGTTTTCCCA CGCCATATGT CCAGTCTTGG ATATTGTAGG CTCATCTATA AACATATTTT 121 CTGTCCAAAC ATCATATATT TGTGGACATC AGAAGCATGA AACTTGATCA TTATACTGTT 181 CTAAATCTGC AAAAGAAAAA AAAGTAATAA TAATATAATA ATAATAATAA TTCTCCCAGC 241 ATCATAATTT GCCGGCAAGT TGTGATGCGA ATCCACCTAT AGGTGAAGAA CATAGTGTTA 301 AATTTGACAA GATTCAAAAA TGGATTAATG AGAAGATATG GTAGTTAGGA GGATAATTCT 361 TCATTGGTAG AAAAGTCAAG ATAGCACCTT TTGTAGGTGA AATTTAGGTG AACCATAAAT 421 TGATTTCACA AGGTAAATCT TGACATTTTG ACATTGTGAT GTCATGTATG ACATCAATAG 481 GAAGAATTCA CTCCTATAAA TAGGTCGCTC CTAATTCATT TGTAAAACAC CTCTGACTTG 541 TCTTCTCATC TCCTAGGCAT TTGTTCTTCT TTATCTCTTG TAGTATTTCA CTTGTACTCT 601 TTTGGAGTGA AATAAATATT GGTTGGTTGT GTCCGGGACT ATGCAAAAGA AAACAAAAGT 661 TTGTCGAACC TCGTTAATTT CTGGCGTTCT TTTTGTTGTT GTCTCATTTG CTAATTATTA 721 GCTACATTTA GATATCGCAG TTGTGAATTC ATCACTCTCT ATATATTCGG CTTCCGCAAC 781 AATTGATACT GTAGATGTTG Predicted gene structure (within gDNA segment 108451 to 114663): Exon 1 110856 110908 ( 53 n); cDNA 185 234 ( 50 n); score: 0.736 Intron 1 110909 111176 ( 268 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0) Exon 2 111177 111190 ( 14 n); cDNA 235 248 ( 14 n); score: 0.786 Intron 2 111191 111564 ( 374 n); Pd: 0.736 (s: 0), Pa: 0.000 (s: 0) Exon 3 111565 111589 ( 25 n); cDNA 249 273 ( 25 n); score: 0.600 Intron 3 111590 111686 ( 97 n); Pd: 0.990 (s: 0), Pa: 0.781 (s: 0) Exon 4 111687 111695 ( 9 n); cDNA 274 282 ( 9 n); score: 0.556 Intron 4 111696 112059 ( 364 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.78) Exon 5 112060 112514 ( 455 n); cDNA 283 745 ( 463 n); score: 0.824 MATCH C01HBa0163B20.1+ SGN-E542167+ 0.815 556 0.695 C PGS_C01HBa0163B20.1+_SGN-E542167+ (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514) Alignment (genomic DNA sequence = upper lines): ATCAGCAAAA AAAAAAAGTA TATTTATACT TTTTATTATT AATAATGAAT TCTTTTCATG 110915 ||| |||||| |||||| || | ||| | | || | | |||||| ||| ||| ATCTGCAAAA GAAAAAAAAG TAATAATA-A TATAAT-AAT AATAAT-AAT TCT....... 234 AAAAAAATTA AACGTGATAT TTTATTTTAT AAAAATTTGA GGCCCCCAAT TTCAGCGGCC 110975 .......... .......... .......... .......... .......... .......... 234 TAAAAAACAA TAGTAAAGAG TCGACACTGC AATTGTGGTG AAAACGATAT AGAAAGGGGT 111035 .......... .......... .......... .......... .......... .......... 234 TTTGAGGGGC AATTTTGTGT TTAAAAATGT CAATGTATGC ATTAAATCTC TTTGCATTAC 111095 .......... .......... .......... .......... .......... .......... 234 TAATACCTAG AAATCATTGG TGTTAGTAAT ATACTCGTTA ATACACAATA GAGTGTATAA 111155 .......... .......... .......... .......... .......... .......... 234 CTAATGCAAG CATTAATAAT ACCAAGCATG AAAATGTACA CCAAACAAGA TACTACAAAT 111215 || ||||| | ||| .......... .......... .CCCAGCATC ATAAT..... .......... .......... 248 ACATAAAGCT AGCTCATGCA TTAATTTTGC TAATACATTC TACCAAACGA CCCCTTAGAG 111275 .......... .......... .......... .......... .......... .......... 248 TTTTGAAGAG TTAAAATTGT TCAAAGTGGT TATTGATAAC AACCAGTGCT ACAAGTCTCG 111335 .......... .......... .......... .......... .......... .......... 248 GAATTAAATT TGTTCAGTTC CATCAGCTTC ACAATAGGAA TTTTTGGTTA GTTTGACTAC 111395 .......... .......... .......... .......... .......... .......... 248 TGCCTTTGTC CCAAGGCTTT AATTTTGAGT TATAAGACGA GATGCAGAGA AAGTTAAGGC 111455 .......... .......... .......... .......... .......... .......... 248 TGACGTTTTA CTTTAGTCAA TGCTTGAGGT TAGAACAGTT ATTTTTGAGT TTAAATGATT 111515 .......... .......... .......... .......... .......... .......... 248 TCACTAGGCC CAAATGGTGA TACTTGGTCT AGTTGAAGAT TTGGTTCAGT TTCCGAAACT 111575 | | ||| | .......... .......... .......... .......... .........T TGCCGGCAAG 259 TTTGGATGAG TTTCATATCC TTACTTGAAA ATTTAGACAT TCTTAAGTTA AAGTTGACTT 111635 || |||| | || TTGTGATGCG AATC...... .......... .......... .......... .......... 273 TTGTCAATGT CTGGTTAAAG TGACTTTGTT TTGGTGTTCT GATGATTTCA GCACTTCGAA 111695 ||| | | .......... .......... .......... .......... .......... .CACCTATAG 282 ATATCATTTT TAAGCTATGG ATAAATTGAT ATTGACATAA ACTTGTTGAT TCATCAATTA 111755 .......... .......... .......... .......... .......... .......... 282 TTTTCATTAT ATTAGCCACA TATAAGCTTG AAAATTTGAG CTTTTCCCGA ATAAAGTTAA 111815 .......... .......... .......... .......... .......... .......... 282 ATTTTGATAA ATTGAGAATT TCAAGTTCGA TTTTAACTCC ATCTTTATGA AATTTCATAT 111875 .......... .......... .......... .......... .......... .......... 282 TTGAAATGGT AGAAACTGGA CTAGAGAGAG ATGTTCAAGA GTATGTGATG GTTGTTTTCC 111935 .......... .......... .......... .......... .......... .......... 282 AAGTAATATA ATGTGTGCAT GTTAACTGTC TGTACAACTT GTAAAATACA TTTGGTAAAA 111995 .......... .......... .......... .......... .......... .......... 282 ACATAAGGGT TAAATGTGGA AAGATGAACT GTTGACAATC TCATGCAACA AAGGTGTTTT 112055 .......... .......... .......... .......... .......... .......... 282 TCTTATTTGT ATTAATGTGT TAAACTTGAC AAGATTCAAA AATGGATTAA TGATAAGATA 112115 | | | |||| |||| ||||| |||||||||| |||||||||| ||| |||||| ....GTGAAG AACATAGTGT TAAATTTGAC AAGATTCAAA AATGGATTAA TGAGAAGATA 338 TGGTAGTTAG AAGGATAATT CTTCATTGGT AGAAAAGTCA AGAAAGCACC -TTTGTAGGT 112174 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| ||||||||| TGGTAGTTAG GAGGATAATT CTTCATTGGT AGAAAAGTCA AGATAGCACC TTTTGTAGGT 398 GAAATTTAGG TGAAACATAA ATTGGTTTCA CGAGGTAAAT CTTGACA--- T---ATTTTG 112228 |||||||||| |||| ||||| |||| ||||| | |||||||| ||||||| | ||| || GAAATTTAGG TGAACCATAA ATTGATTTCA CAAGGTAAAT CTTGACATTT TGACATTGTG 458 ATGTCATGGA TGACATTAAT AGGAAGAATT CACTCCTAT- -GTAGGTAGC TCCTAATTCA 112286 |||||||| | |||||| ||| |||||||||| ||||||||| ||||| || |||||||||| ATGTCATGTA TGACATCAAT AGGAAGAATT CACTCCTATA AATAGGTCGC TCCTAATTCA 518 TTTGTAACAC ATCT-TTACT TGCCTTCTCA TCTCCTAATA CATTTGTTCT TCTTCCCATC 112345 ||||||| || | || | ||| || ||||||| |||||| | |||||||||| |||| || TTTGTAAAAC ACCTCTGACT TGTCTTCTCA TCTCCT-AGG CATTTGTTCT TCTTTATCTC 577 TTGTAGTATT TTACTTGTAA TTTTTTGGAG TGAAATAAAT ATTGGTTGGT TGTGTCCGAG 112405 |||||||||| | ||||||| | |||||||| |||||||||| |||||||||| |||||||| | TTGTAGTATT TCACTTGTAC TCTTTTGGAG TGAAATAAAT ATTGGTTGGT TGTGTCCG-G 636 GAGTAGGCAA AAGAAAATAA AATTTTACCG AACCTCGTTA ATTCTTGGTA TTCCTTTTAT 112465 || || |||| ||||||| || || ||| || |||||||||| ||| ||| ||| |||| | GACTATGCAA AAGAAAACAA AAGTTTGTCG AACCTCGTTA ATTTCTGGCG TTCTTTTTGT 696 TGTTGTCTTA TTTACTATTT ATTAGCTACC TTTAGTTATA GTAGTTGTG 112514 |||||||| | ||| ||| || ||||||||| ||||| ||| | ||||||| TGTTGTCTCA TTTGCTAATT ATTAGCTACA TTTAGATATC GCAGTTGTG 745 hqPGS_C01HBa0163B20.1+_SGN-E542167+ (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514) ******************************************************************************** EST sequence 49 +strand 681 n (File: SGN-E548670+) 1 CCTCGTGCCG TCTAAGCTAG TTTTTGAAGT ATGAGTTTGG CTCAAAGCCT AATTTTAAAT 61 AGTTTTCCCA CGCCATATGT CCAGTCTTGG ATATTGTAGG CTCATCTATA AACATATTTT 121 CTGTCCAAAC ATCATATATT TGTGGACATC AGAAGCATGA AACTTGATCA TTATACTGTT 181 CTAAATCTGC AAAAGAAAAA AAAGTAATAA TAATATAATA ATAATAATAA TTCTCCCAGC 241 ATCATAATTT GCCGGCAAGT TGTGATGCGA ATCCACCTAT AGGTGAAGAA CATAGTGTTA 301 AATTTGACAA GATTCAAAAA TGGATTAATG AGAAGATATG GTAGTTAGGA GGATAATTCT 361 TCATTGGTAG AAAAGTCAAG ATAGCACCTT TTGTAGGTGA AATTTAGGTG AACCATAAAT 421 TGATTTCACA AGGTAAATCT TGACATTTTG ACATTGTGAT GTCATGTATG ACATCAATAG 481 GAAGAATTCA CTCCTATAAA TAGGTCGCTC CTAATTCATT TGTAAAACAC CTCTGACTTG 541 TCTTCTCATC TCCTAGGCAT TTGTTCTTCT TTATCTCTTG TAGTATTTCA CTTGTACTCT 601 TTTGGAGTGA AATNATATTG GGTTGGTTGT GTCCGGGACT ATGCAAAAGA AACAAAAGTT 661 TGTCGAACCT CGTTAATTTC T Predicted gene structure (within gDNA segment 108451 to 114463): Exon 1 110856 110908 ( 53 n); cDNA 185 234 ( 50 n); score: 0.736 Intron 1 110909 111176 ( 268 n); Pd: 0.000 (s: 0.72), Pa: 0.000 (s: 0) Exon 2 111177 111190 ( 14 n); cDNA 235 248 ( 14 n); score: 0.786 Intron 2 111191 111564 ( 374 n); Pd: 0.736 (s: 0), Pa: 0.000 (s: 0) Exon 3 111565 111589 ( 25 n); cDNA 249 273 ( 25 n); score: 0.600 Intron 3 111590 111686 ( 97 n); Pd: 0.990 (s: 0), Pa: 0.781 (s: 0) Exon 4 111687 111695 ( 9 n); cDNA 274 282 ( 9 n); score: 0.556 Intron 4 111696 112059 ( 364 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.78) Exon 5 112060 112448 ( 389 n); cDNA 283 678 ( 396 n); score: 0.812 MATCH C01HBa0163B20.1+ SGN-E548670+ 0.803 490 0.720 C PGS_C01HBa0163B20.1+_SGN-E548670+ (110856 110908,111177 111190,111565 111589,111687 111695,112060 112448) Alignment (genomic DNA sequence = upper lines): ATCAGCAAAA AAAAAAAGTA TATTTATACT TTTTATTATT AATAATGAAT TCTTTTCATG 110915 ||| |||||| |||||| || | ||| | | || | | |||||| ||| ||| ATCTGCAAAA GAAAAAAAAG TAATAATA-A TATAAT-AAT AATAAT-AAT TCT....... 234 AAAAAAATTA AACGTGATAT TTTATTTTAT AAAAATTTGA GGCCCCCAAT TTCAGCGGCC 110975 .......... .......... .......... .......... .......... .......... 234 TAAAAAACAA TAGTAAAGAG TCGACACTGC AATTGTGGTG AAAACGATAT AGAAAGGGGT 111035 .......... .......... .......... .......... .......... .......... 234 TTTGAGGGGC AATTTTGTGT TTAAAAATGT CAATGTATGC ATTAAATCTC TTTGCATTAC 111095 .......... .......... .......... .......... .......... .......... 234 TAATACCTAG AAATCATTGG TGTTAGTAAT ATACTCGTTA ATACACAATA GAGTGTATAA 111155 .......... .......... .......... .......... .......... .......... 234 CTAATGCAAG CATTAATAAT ACCAAGCATG AAAATGTACA CCAAACAAGA TACTACAAAT 111215 || ||||| | ||| .......... .......... .CCCAGCATC ATAAT..... .......... .......... 248 ACATAAAGCT AGCTCATGCA TTAATTTTGC TAATACATTC TACCAAACGA CCCCTTAGAG 111275 .......... .......... .......... .......... .......... .......... 248 TTTTGAAGAG TTAAAATTGT TCAAAGTGGT TATTGATAAC AACCAGTGCT ACAAGTCTCG 111335 .......... .......... .......... .......... .......... .......... 248 GAATTAAATT TGTTCAGTTC CATCAGCTTC ACAATAGGAA TTTTTGGTTA GTTTGACTAC 111395 .......... .......... .......... .......... .......... .......... 248 TGCCTTTGTC CCAAGGCTTT AATTTTGAGT TATAAGACGA GATGCAGAGA AAGTTAAGGC 111455 .......... .......... .......... .......... .......... .......... 248 TGACGTTTTA CTTTAGTCAA TGCTTGAGGT TAGAACAGTT ATTTTTGAGT TTAAATGATT 111515 .......... .......... .......... .......... .......... .......... 248 TCACTAGGCC CAAATGGTGA TACTTGGTCT AGTTGAAGAT TTGGTTCAGT TTCCGAAACT 111575 | | ||| | .......... .......... .......... .......... .........T TGCCGGCAAG 259 TTTGGATGAG TTTCATATCC TTACTTGAAA ATTTAGACAT TCTTAAGTTA AAGTTGACTT 111635 || |||| | || TTGTGATGCG AATC...... .......... .......... .......... .......... 273 TTGTCAATGT CTGGTTAAAG TGACTTTGTT TTGGTGTTCT GATGATTTCA GCACTTCGAA 111695 ||| | | .......... .......... .......... .......... .......... .CACCTATAG 282 ATATCATTTT TAAGCTATGG ATAAATTGAT ATTGACATAA ACTTGTTGAT TCATCAATTA 111755 .......... .......... .......... .......... .......... .......... 282 TTTTCATTAT ATTAGCCACA TATAAGCTTG AAAATTTGAG CTTTTCCCGA ATAAAGTTAA 111815 .......... .......... .......... .......... .......... .......... 282 ATTTTGATAA ATTGAGAATT TCAAGTTCGA TTTTAACTCC ATCTTTATGA AATTTCATAT 111875 .......... .......... .......... .......... .......... .......... 282 TTGAAATGGT AGAAACTGGA CTAGAGAGAG ATGTTCAAGA GTATGTGATG GTTGTTTTCC 111935 .......... .......... .......... .......... .......... .......... 282 AAGTAATATA ATGTGTGCAT GTTAACTGTC TGTACAACTT GTAAAATACA TTTGGTAAAA 111995 .......... .......... .......... .......... .......... .......... 282 ACATAAGGGT TAAATGTGGA AAGATGAACT GTTGACAATC TCATGCAACA AAGGTGTTTT 112055 .......... .......... .......... .......... .......... .......... 282 TCTTATTTGT ATTAATGTGT TAAACTTGAC AAGATTCAAA AATGGATTAA TGATAAGATA 112115 | | | |||| |||| ||||| |||||||||| |||||||||| ||| |||||| ....GTGAAG AACATAGTGT TAAATTTGAC AAGATTCAAA AATGGATTAA TGAGAAGATA 338 TGGTAGTTAG AAGGATAATT CTTCATTGGT AGAAAAGTCA AGAAAGCACC -TTTGTAGGT 112174 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| ||||||||| TGGTAGTTAG GAGGATAATT CTTCATTGGT AGAAAAGTCA AGATAGCACC TTTTGTAGGT 398 GAAATTTAGG TGAAACATAA ATTGGTTTCA CGAGGTAAAT CTTGACA--- T---ATTTTG 112228 |||||||||| |||| ||||| |||| ||||| | |||||||| ||||||| | ||| || GAAATTTAGG TGAACCATAA ATTGATTTCA CAAGGTAAAT CTTGACATTT TGACATTGTG 458 ATGTCATGGA TGACATTAAT AGGAAGAATT CACTCCTAT- -GTAGGTAGC TCCTAATTCA 112286 |||||||| | |||||| ||| |||||||||| ||||||||| ||||| || |||||||||| ATGTCATGTA TGACATCAAT AGGAAGAATT CACTCCTATA AATAGGTCGC TCCTAATTCA 518 TTTGTAACAC ATCT-TTACT TGCCTTCTCA TCTCCTAATA CATTTGTTCT TCTTCCCATC 112345 ||||||| || | || | ||| || ||||||| |||||| | |||||||||| |||| || TTTGTAAAAC ACCTCTGACT TGTCTTCTCA TCTCCT-AGG CATTTGTTCT TCTTTATCTC 577 TTGTAGTATT TTACTTGTAA TTTTTTGGAG TGAAATAAAT ATTGGTTGGT TGTGTCCGAG 112405 |||||||||| | ||||||| | |||||||| |||||| | | ||||||| |||||||| | TTGTAGTATT TCACTTGTAC TCTTTTGGAG TGAAATNATA TTGGGTTGGT TGTGTCCG-G 636 GAGTAGGCAA AAGAAAATAA AATTTTACCG AACCTCGTTA ATT 112448 || || |||| ||| ||| || || ||| || |||||||||| ||| GACTATGCAA AAG-AAACAA AAGTTTGTCG AACCTCGTTA ATT 678 hqPGS_C01HBa0163B20.1+_SGN-E548670+ (110856 110908,111177 111190,111565 111589,111687 111695,112060 112448) ******************************************************************************** EST sequence 253 -strand 850 n (File: SGN-E542170-) 1 CATGGATGAC ATCAATAGGA AGAATTCACT CCTATAAATA GGTAGCTCCT AATTCATTTG 61 TAAAACACCT CTAACTNGTC TTCTCATCTA CCAAGGCATT TGTTTTTCTT TCTCTCTTGT 121 AGTATTTCAC TTGTACTCTT TTGGAGTGAA ATAAATATTG GTTGGTTGTG TCCGAGGACT 181 AGGCAAAAGA AAACAAAAGT TTGTCGAACC TCATTAATTT CTGGCGTTCT TTTTGTTGTT 241 GTCTCATTTA CTATTTATTA GCTACATTTA GATATAGCAG TTGTGATTCC ATCACTCTCT 301 ATATATTCGG CTTCAGCAAC ACATATACAT ACAACTTTTT TCCAGTTCTA ACTTTTAATT 361 TTTCTGTTGT GCTGTTGTGA TGCTAAAATT TGATTTTCAA TACTCACCGT AAATTTCTAA 421 TTCTAATTCG GATTTGACTA TTTTCCAGGG AGAGTGGCGG TTGTTGATTC TTTCAGTGGT 481 ACTCTGACCA CACGAGGCCC CGGTTACTCT GCTAGTTACT TTGTTGATTC TATCAGTGGT 541 AGTCTGACCA CCCGAGGCCC CGGTTACTCC CTAAGATTTC ATATTGTCCA TGTGGTTCTG 601 GCACATGCCT ATATCAGACA GCCAAAACAG GGGGGAAATT GGGTCAATTT CGAATATACA 661 TGTATGATAA AGTAATTAGT TTACAATAAA CATAGTCACA TTTTATTTAC ATAAAAAAAA 721 ATTGTCAAAA GTTATAACTA TACAATATAG CTTGCGACTT ACATATACAT TAATTATCAT 781 ATATTCAAAA AGCTGAATAT AACTTATTTG TACATAAAAA AAAAAAAAAA AAAACTCGAG 841 GGGGGCCCGT Predicted gene structure (within gDNA segment 111506 to 119727): Exon 1 112233 112514 ( 282 n); cDNA 1 285 ( 285 n); score: 0.853 Intron 1 112515 116425 (3911 n); Pd: 0.000 (s: 0.92), Pa: 0.000 (s: 0) Exon 2 116426 116461 ( 36 n); cDNA 286 321 ( 36 n); score: 0.917 PPA cDNA 816 835 MATCH C01HBa0163B20.1+ SGN-E542170- 0.853 318 0.374 C PGS_C01HBa0163B20.1+_SGN-E542170- (112233 112514,116426 116461) Alignment (genomic DNA sequence = upper lines): CATGGATGAC ATTAATAGGA AGAATTCACT CCTAT-G-TA GGTAGCTCCT AATTCATTTG 112290 |||||||||| || ||||||| |||||||||| ||||| || |||||||||| |||||||||| CATGGATGAC ATCAATAGGA AGAATTCACT CCTATAAATA GGTAGCTCCT AATTCATTTG 60 TAACACATCT -TTACTTGCC TTCTCATCTC CTAATACATT TGTTCTTCTT CCCATCTTGT 112349 ||| ||| || | ||| | | ||||||||| | || |||| |||| ||||| | |||||| TAAAACACCT CTAACTNGTC TTCTCATCTA CCAAGGCATT TGTTTTTCTT TCTCTCTTGT 120 AGTATTTTAC TTGTAATTTT TTGGAGTGAA ATAAATATTG GTTGGTTGTG TCCGAGGAGT 112409 ||||||| || ||||| | || |||||||||| |||||||||| |||||||||| |||||||| | AGTATTTCAC TTGTACTCTT TTGGAGTGAA ATAAATATTG GTTGGTTGTG TCCGAGGACT 180 AGGCAAAAGA AAATAAAATT TTACCGAACC TCGTTAATTC TTGGTATTCC TTTTATTGTT 112469 |||||||||| ||| |||| | || |||||| || |||||| ||| ||| |||| ||||| AGGCAAAAGA AAACAAAAGT TTGTCGAACC TCATTAATTT CTGGCGTTCT TTTTGTTGTT 240 GTCTTATTTA CTATTTATTA GCTACCTTTA GTTATAGTAG TTGTGATTCA TGTCACATCC 112529 |||| ||||| |||||||||| ||||| |||| | ||||| || ||||| GTCTCATTTA CTATTTATTA GCTACATTTA GATATAGCAG TTGTG..... .......... 285 CGAGACCACA ACCTATAATA TATGGCCCTC TCGGAGTGCA ACCGGCGTAC TTGACCTCTC 112589 .......... .......... .......... .......... .......... .......... 285 GGAGGTCTTG TACAAGCCCT TCCATATCGT TCATCACATA TAAACATATG AAAGTAGTGC 112649 .......... .......... .......... .......... .......... .......... 285 AGAATTAAAA CTTTTGATAA ACATTCTATA ATTCTTTAAA AACTCTTTCA TATAAAACTC 112709 .......... .......... .......... .......... .......... .......... 285 ATAGGATATA CTAAGTCTCA TTTCATCAAA TCTTAGACAC AAGAGTACTT TGGGGCATGG 112769 .......... .......... .......... .......... .......... .......... 285 CCCATAGACA ATAGAAATAC AATATTACTA AGTCTATTAC AATAGTTTGA TAAGGGAAAT 112829 .......... .......... .......... .......... .......... .......... 285 AAAAGACATT TATGCCCTCG AGTCAAATGA GGACATACTT CAACTAGCTT GAACAATCTT 112889 .......... .......... .......... .......... .......... .......... 285 CTAATCCAAG TTTTGCTCTC CAAAAGCACC TTCACCTATG AATCACTTTA GAGATAGATA 112949 .......... .......... .......... .......... .......... .......... 285 AAATCATGGA ATTAGTACAA TCACATTTAT TAAGTATGAC ATAATACATA AAAATCATGA 113009 .......... .......... .......... .......... .......... .......... 285 AAATGGACAT TTGTTGAAAA TATGCATCAT TTGATTTAAA TATCATAATA ACAACATTTA 113069 .......... .......... .......... .......... .......... .......... 285 ACAACTTAGA AACACATAAG AAATTAATTA GCCAATTTAT CACATTTTTA AGGCAACTTT 113129 .......... .......... .......... .......... .......... .......... 285 ACGATGAACT ACTTCACTGT ACAGTGAACT CCTTCACTAT TACAGTGAAG TTTCTTACCT 113189 .......... .......... .......... .......... .......... .......... 285 TCACTTTAGA CACCTTCTAT CATGTAATCC TCTCACTAAA AGCTATCCTA AAACTCATTT 113249 .......... .......... .......... .......... .......... .......... 285 AAGTAAGACA AAGAGAGATC GCTCATACAA CCTCTCTAGG CACACCTAAA TGATCTTTAA 113309 .......... .......... .......... .......... .......... .......... 285 GACCACCTAT AATGAGATCA ACACACACTT ACAAGACACC AAACATATGA ACATGAGATT 113369 .......... .......... .......... .......... .......... .......... 285 CTTCTACCAA AGGTGATTCA AAGTCTCACT TGAGTGTATT GTGAAGCGAC CGCCCATACA 113429 .......... .......... .......... .......... .......... .......... 285 ATCCCTTACA CACACTTAAG ATATCTTATA GACTACCTAA GATAGAATCC TTCTAACTTA 113489 .......... .......... .......... .......... .......... .......... 285 ATACAACAAC ATATAGATGA TATGACATTC TCCTTCCAAA GGCTATCAAA ATACTTACTT 113549 .......... .......... .......... .......... .......... .......... 285 AAGTAAATCA AGAAGATAAC GTTCATATTG ACCTATTCAA GATTACCAAA ATAATCTTTA 113609 .......... .......... .......... .......... .......... .......... 285 AGACTACCTA AGGCTTAGAT CATGTCTACA TAATCAACCA TCTTCCCTAA GTAGAGTCAT 113669 .......... .......... .......... .......... .......... .......... 285 TCTTAGGACT TATCTAGGTA AGATACGAAG TGACCATTCT TATGCCCCCT TCACACCTTA 113729 .......... .......... .......... .......... .......... .......... 285 ACTAGACAAC TATTAACTAC TATAGATAAG TACTTATTCA TTTAACATAC TTTCTTAACT 113789 .......... .......... .......... .......... .......... .......... 285 TAATTCATTA CATTCATTTA AGACTCATTC ATCACATAAG GACATTCAAG TAATGGTCTT 113849 .......... .......... .......... .......... .......... .......... 285 GGACAACACC TAGGGACTCT AACTAACATC TTCAAAACTA ACATCTTCAA AGTCTATTGT 113909 .......... .......... .......... .......... .......... .......... 285 GCAATGTCTA GATAGTATCT CATACCATCA CCTAAACTTC ATTGAACTTC TCTAATGCTA 113969 .......... .......... .......... .......... .......... .......... 285 GTAGGTATCC CATATGATAA GAATAAACAA TAAACAACAT AGAAAATGAT AGATAAATTT 114029 .......... .......... .......... .......... .......... .......... 285 GGAGTTCTAA CCTACTCCAA TGAGGGTGTT CTACTTGCCA AGTGTAGAAG TAGCACACAT 114089 .......... .......... .......... .......... .......... .......... 285 CCATGTAGGC ACATAACAAT AAGGAATATG ACGGGCTTTT ATGCACTCTA GTCATTCTCA 114149 .......... .......... .......... .......... .......... .......... 285 AGTAGAGATA CATTGTACTC TAGTCTCATT TTCAAGTAGA GCTACTTCTT ATAACATACT 114209 .......... .......... .......... .......... .......... .......... 285 CACTCGGTGC TAGCGTTTGT TCTCATAGAG TCATTTGAAT TAAAGGTTCA TATAAAGGAG 114269 .......... .......... .......... .......... .......... .......... 285 TTCAAAATCT AGTTCATAAC CCAATCACAT TCACCCTACC AAAGATGTCC TCTAGGAATA 114329 .......... .......... .......... .......... .......... .......... 285 CCATAGAATT GCGACAAAGA TAGATCATTA TGACTTTCCT AAGGATGATA TGATGTCGTT 114389 .......... .......... .......... .......... .......... .......... 285 CAACCAATCA ACCCTAAGTC ATTCATTACA TGAAGGATAC CATTACGATT TTTTACTTTC 114449 .......... .......... .......... .......... .......... .......... 285 ACATTCATAA CCTTACCACT AGGTTTAAGG TTCCACGCAT ATGACCTTCG TAACATAATT 114509 .......... .......... .......... .......... .......... .......... 285 CAAGGTCTCA CATATAATTC ATTCATACAT GACAAGGGTG CACTAAGATT ACCTAGTAAA 114569 .......... .......... .......... .......... .......... .......... 285 GACATCTTAC ATTCACATAT CATTCATATA TCAAGTAAGG GACACAAGTC TACCAAAACT 114629 .......... .......... .......... .......... .......... .......... 285 AGACACAATA TTCTGTACTT TATTACATAT AGCATATCAT TCTTTGAAGC ACTCAGGAAT 114689 .......... .......... .......... .......... .......... .......... 285 AACCCTTATC ATCTTTATGT AATCCTATAC ATTATTATAA CATCATAATT ATAACCATCA 114749 .......... .......... .......... .......... .......... .......... 285 TAGACTCATA TAGTCAAGTA GGAACAATCA TGCATCAACT CTAAGACTAC ACACCCAAGC 114809 .......... .......... .......... .......... .......... .......... 285 ACATAGTCAT AGTCTAAATG ACCACCTAAC ATCAATAGAA GAATATATAC TTTCACATTG 114869 .......... .......... .......... .......... .......... .......... 285 ATCACATGTA GATATATATG CTCATACTTC ACATAAATAA ACTACACAAA TCATCATAAT 114929 .......... .......... .......... .......... .......... .......... 285 ACTTCAATTA GTTTGCCGAT GAGGCCATGA TCATCATAAT ACATAAAGTA ACACCGACAA 114989 .......... .......... .......... .......... .......... .......... 285 GGCCATATCA ATTGCAAGTA AACCACATAG CACCGACACC ATAAGCGTAC AATACCAATT 115049 .......... .......... .......... .......... .......... .......... 285 ACAACATAAT TGAATTATAA TTAATATAAA ATAAAGAGAA TTATGGAAGC ATACCACCAA 115109 .......... .......... .......... .......... .......... .......... 285 TACATTCTCC CCACTTCAAT CCATACCTAA TAATCCAATT CAATACCATA AGGCCATTAC 115169 .......... .......... .......... .......... .......... .......... 285 CAATGTCTAT GAATAATAAT TCAATACAAA ACTATAATAT TCAATGAATC TAGGTCAATT 115229 .......... .......... .......... .......... .......... .......... 285 CAATATATGT TTAGCAATAT AAGACCAATT AGACATCAAT TAAATACAAT TATTACATCA 115289 .......... .......... .......... .......... .......... .......... 285 TTCAATAGCC CATAGAAAAC TACACTAGAA TTCATAAGCA TTAAGTCAAT ATCACTTAAC 115349 .......... .......... .......... .......... .......... .......... 285 CCATAAGTAG TCAAAAACTA GGATTCATCA ATTACATGGG TTCATAGGCT AATTGAGTTA 115409 .......... .......... .......... .......... .......... .......... 285 GAATCATATA ATTAACAAAT ATTCAATCAA TATACAATGA TTTAAAACCT TTAATGCAAG 115469 .......... .......... .......... .......... .......... .......... 285 AACCTACGGA TAGATAATAA AATTAGACAA TTCATCTTTG AAAACTTTAG AAAACTCTTT 115529 .......... .......... .......... .......... .......... .......... 285 GAATGTTGGG CTCCTTAATT AATAAAGTTT CAAGGATAAC AAATCATACC TCAATGATGT 115589 .......... .......... .......... .......... .......... .......... 285 TATTCCACCA ATTTGATGAA TAATCACCAC TCAATTATCC AATCCAAGCT CTTCCTTGAG 115649 .......... .......... .......... .......... .......... .......... 285 TTTTGTTCCA ATAGAGTTCT AGAGAATTTC TAAGGGAATT TGGGTTTTGA TTTTGAAGAA 115709 .......... .......... .......... .......... .......... .......... 285 TGAATTCTTC TGAATGTAAA AGGCTAATAA ACATGTTTAG AATACCCAAA ATACCCCAAC 115769 .......... .......... .......... .......... .......... .......... 285 CAACAGACTG TTCTGTTGGT CTATTGTTTG GGATTGAGGC TGGTACTTGG CTTGGTCATT 115829 .......... .......... .......... .......... .......... .......... 285 TCCCACTCCT AAGTACTGAC CATGACACCC ATCGACGGGG CATCAACTGT CCCACGAGCC 115889 .......... .......... .......... .......... .......... .......... 285 GTCTACTAAC TCTGTCGTTT GGGGCTGTCT TGGCTTCAAG GAAAGGGTCC TTCCTCAAGG 115949 .......... .......... .......... .......... .......... .......... 285 ACCCTTGGTT GGTCCTTGGG GACTTTCACC CAGACGTTTA CACTCCAAAT ATGTTTATAT 116009 .......... .......... .......... .......... .......... .......... 285 ACAAGTTTAT TACCTCTCAC ATGAATTTCA TAAAAAACGA ACTCGTAAAA CTCAACGAAT 116069 .......... .......... .......... .......... .......... .......... 285 CATTCCAAGA CACACAAGGT CGTTTCAAGG AAAACCTTTT GAATATTATA GACGTTCTTG 116129 .......... .......... .......... .......... .......... .......... 285 GACATTTGAC CTCCAAACTT CACGAAACTT GACGTGTTGA CTATAAACAC TATATTAACT 116189 .......... .......... .......... .......... .......... .......... 285 CCTAATAAGA ACCTCATTAA TTCAGAAAAC ACACATATAG ACACATAATC ACACATGAGG 116249 .......... .......... .......... .......... .......... .......... 285 CACATATGTG CCTTAGTTGT CCAACGTCTT AGTCATCCCT TGATGTTTGA CTTCTAATGC 116309 .......... .......... .......... .......... .......... .......... 285 ACCTAAACTC TTAGACACTG CCTCAATATC AAATTATAAA ACATTTTAGG ACCTTAGACC 116369 .......... .......... .......... .......... .......... .......... 285 ATCGTGAAAA CCATGTTAGG ATCAAGCTTC GCCTAAGTCA TTTTCAAGGT ATTACAATTC 116429 |||| .......... .......... .......... .......... .......... ......ATTC 289 CATTACTCTC TATATATTCC GCTTCCGCAA CA 116461 ||| |||||| ||||||||| ||||| |||| || CATCACTCTC TATATATTCG GCTTCAGCAA CA 321 hqPGS_C01HBa0163B20.1+_SGN-E542170- (112233 112514,116426 116461) ******************************************************************************** EST sequence 105 +strand 669 n (File: SGN-E390507+) 1 CTCCTTAAGG CATTTGTTCT TCTTTCTCTC TTGTAGTATT TCACTTGTAC TCTTTTGGAG 61 TGAAATAAAT ATTGGTTGGT TGTGTCCGAG GAGTAGGCAA AAGAAAACAA AAGTTTGCCG 121 AACCTCGTTA ATTCTTGGTG TTCTTTCTCT TGTTGTCTCA TTTACTATTT ATTAGTTACC 181 TTTAGATATA GTAGTTGTGA TTCCATCACT CTCTATATAT TCGGCTTCCG CAACATCAGA 241 GATATCACAT CCTTATGAGT TTACATTATT CTTAGAGAAG CAAAAATTAC TGTGACAAAT 301 GAATAAGATA GCTAATTAGA TTTCCTCTTT CTAAAGTGTC CACAACTTAA GCCCCTTGTT 361 ATGCCTTCTT GGGACAAAAT TAAAAAGCGA ACAATGAGCA GGGATATTCA TATATGGAAA 421 GATCTTGAAT CACTAACAAT GCAAAGGATA AATAATCATG CACGTGTCAT CGAGAAAATT 481 GGAAGGAGTT GCAAAAATAT TTCCAAGCTC AAAGTTGTGG GGCCCTATGA TATGCTCTTT 541 GCATCTACAT TGGATTCATT TCTTCAAAAC TTGGAATTAT TGAGTCTGAG GTGCATAGTG 601 TTATCTAAAC CTTCTCTGAC TCTAATCTTG GAAGATTTAA AAAAAGTTGA AAGTGCTCAA 661 CATATCTCA Predicted gene structure (within gDNA segment 111248 to 117788): Exon 1 112317 112514 ( 198 n); cDNA 1 199 ( 199 n); score: 0.896 Intron 1 112515 116425 (3911 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.88) Exon 2 116426 116465 ( 40 n); cDNA 200 238 ( 39 n); score: 0.875 Intron 2 116466 116709 ( 244 n); Pd: 0.000 (s: 0.88), Pa: 0.869 (s: 0) Exon 3 116710 116730 ( 21 n); cDNA 239 259 ( 21 n); score: 0.619 MATCH C01HBa0163B20.1+ SGN-E390507+ 0.896 259 0.387 C PGS_C01HBa0163B20.1+_SGN-E390507+ (112317 112514,116426 116465,116710 116730) Alignment (genomic DNA sequence = upper lines): CTCCT-AATA CATTTGTTCT TCTTCCCATC TTGTAGTATT TTACTTGTAA TTTTTTGGAG 112375 ||||| || |||||||||| |||| | || |||||||||| | ||||||| | |||||||| CTCCTTAAGG CATTTGTTCT TCTTTCTCTC TTGTAGTATT TCACTTGTAC TCTTTTGGAG 60 TGAAATAAAT ATTGGTTGGT TGTGTCCGAG GAGTAGGCAA AAGAAAATAA AATTTTACCG 112435 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || || ||| ||| TGAAATAAAT ATTGGTTGGT TGTGTCCGAG GAGTAGGCAA AAGAAAACAA AAGTTTGCCG 120 AACCTCGTTA ATTCTTGGTA TTCCTTTTAT TGTTGTCTTA TTTACTATTT ATTAGCTACC 112495 |||||||||| ||||||||| ||| || | | |||||||| | |||||||||| ||||| |||| AACCTCGTTA ATTCTTGGTG TTCTTTCTCT TGTTGTCTCA TTTACTATTT ATTAGTTACC 180 TTTAGTTATA GTAGTTGTGA TTCATGTCAC ATCCCGAGAC CACAACCTAT AATATATGGC 112555 ||||| |||| ||||||||| TTTAGATATA GTAGTTGTG. .......... .......... .......... .......... 199 CCTCTCGGAG TGCAACCGGC GTACTTGACC TCTCGGAGGT CTTGTACAAG CCCTTCCATA 112615 .......... .......... .......... .......... .......... .......... 199 TCGTTCATCA CATATAAACA TATGAAAGTA GTGCAGAATT AAAACTTTTG ATAAACATTC 112675 .......... .......... .......... .......... .......... .......... 199 TATAATTCTT TAAAAACTCT TTCATATAAA ACTCATAGGA TATACTAAGT CTCATTTCAT 112735 .......... .......... .......... .......... .......... .......... 199 CAAATCTTAG ACACAAGAGT ACTTTGGGGC ATGGCCCATA GACAATAGAA ATACAATATT 112795 .......... .......... .......... .......... .......... .......... 199 ACTAAGTCTA TTACAATAGT TTGATAAGGG AAATAAAAGA CATTTATGCC CTCGAGTCAA 112855 .......... .......... .......... .......... .......... .......... 199 ATGAGGACAT ACTTCAACTA GCTTGAACAA TCTTCTAATC CAAGTTTTGC TCTCCAAAAG 112915 .......... .......... .......... .......... .......... .......... 199 CACCTTCACC TATGAATCAC TTTAGAGATA GATAAAATCA TGGAATTAGT ACAATCACAT 112975 .......... .......... .......... .......... .......... .......... 199 TTATTAAGTA TGACATAATA CATAAAAATC ATGAAAATGG ACATTTGTTG AAAATATGCA 113035 .......... .......... .......... .......... .......... .......... 199 TCATTTGATT TAAATATCAT AATAACAACA TTTAACAACT TAGAAACACA TAAGAAATTA 113095 .......... .......... .......... .......... .......... .......... 199 ATTAGCCAAT TTATCACATT TTTAAGGCAA CTTTACGATG AACTACTTCA CTGTACAGTG 113155 .......... .......... .......... .......... .......... .......... 199 AACTCCTTCA CTATTACAGT GAAGTTTCTT ACCTTCACTT TAGACACCTT CTATCATGTA 113215 .......... .......... .......... .......... .......... .......... 199 ATCCTCTCAC TAAAAGCTAT CCTAAAACTC ATTTAAGTAA GACAAAGAGA GATCGCTCAT 113275 .......... .......... .......... .......... .......... .......... 199 ACAACCTCTC TAGGCACACC TAAATGATCT TTAAGACCAC CTATAATGAG ATCAACACAC 113335 .......... .......... .......... .......... .......... .......... 199 ACTTACAAGA CACCAAACAT ATGAACATGA GATTCTTCTA CCAAAGGTGA TTCAAAGTCT 113395 .......... .......... .......... .......... .......... .......... 199 CACTTGAGTG TATTGTGAAG CGACCGCCCA TACAATCCCT TACACACACT TAAGATATCT 113455 .......... .......... .......... .......... .......... .......... 199 TATAGACTAC CTAAGATAGA ATCCTTCTAA CTTAATACAA CAACATATAG ATGATATGAC 113515 .......... .......... .......... .......... .......... .......... 199 ATTCTCCTTC CAAAGGCTAT CAAAATACTT ACTTAAGTAA ATCAAGAAGA TAACGTTCAT 113575 .......... .......... .......... .......... .......... .......... 199 ATTGACCTAT TCAAGATTAC CAAAATAATC TTTAAGACTA CCTAAGGCTT AGATCATGTC 113635 .......... .......... .......... .......... .......... .......... 199 TACATAATCA ACCATCTTCC CTAAGTAGAG TCATTCTTAG GACTTATCTA GGTAAGATAC 113695 .......... .......... .......... .......... .......... .......... 199 GAAGTGACCA TTCTTATGCC CCCTTCACAC CTTAACTAGA CAACTATTAA CTACTATAGA 113755 .......... .......... .......... .......... .......... .......... 199 TAAGTACTTA TTCATTTAAC ATACTTTCTT AACTTAATTC ATTACATTCA TTTAAGACTC 113815 .......... .......... .......... .......... .......... .......... 199 ATTCATCACA TAAGGACATT CAAGTAATGG TCTTGGACAA CACCTAGGGA CTCTAACTAA 113875 .......... .......... .......... .......... .......... .......... 199 CATCTTCAAA ACTAACATCT TCAAAGTCTA TTGTGCAATG TCTAGATAGT ATCTCATACC 113935 .......... .......... .......... .......... .......... .......... 199 ATCACCTAAA CTTCATTGAA CTTCTCTAAT GCTAGTAGGT ATCCCATATG ATAAGAATAA 113995 .......... .......... .......... .......... .......... .......... 199 ACAATAAACA ACATAGAAAA TGATAGATAA ATTTGGAGTT CTAACCTACT CCAATGAGGG 114055 .......... .......... .......... .......... .......... .......... 199 TGTTCTACTT GCCAAGTGTA GAAGTAGCAC ACATCCATGT AGGCACATAA CAATAAGGAA 114115 .......... .......... .......... .......... .......... .......... 199 TATGACGGGC TTTTATGCAC TCTAGTCATT CTCAAGTAGA GATACATTGT ACTCTAGTCT 114175 .......... .......... .......... .......... .......... .......... 199 CATTTTCAAG TAGAGCTACT TCTTATAACA TACTCACTCG GTGCTAGCGT TTGTTCTCAT 114235 .......... .......... .......... .......... .......... .......... 199 AGAGTCATTT GAATTAAAGG TTCATATAAA GGAGTTCAAA ATCTAGTTCA TAACCCAATC 114295 .......... .......... .......... .......... .......... .......... 199 ACATTCACCC TACCAAAGAT GTCCTCTAGG AATACCATAG AATTGCGACA AAGATAGATC 114355 .......... .......... .......... .......... .......... .......... 199 ATTATGACTT TCCTAAGGAT GATATGATGT CGTTCAACCA ATCAACCCTA AGTCATTCAT 114415 .......... .......... .......... .......... .......... .......... 199 TACATGAAGG ATACCATTAC GATTTTTTAC TTTCACATTC ATAACCTTAC CACTAGGTTT 114475 .......... .......... .......... .......... .......... .......... 199 AAGGTTCCAC GCATATGACC TTCGTAACAT AATTCAAGGT CTCACATATA ATTCATTCAT 114535 .......... .......... .......... .......... .......... .......... 199 ACATGACAAG GGTGCACTAA GATTACCTAG TAAAGACATC TTACATTCAC ATATCATTCA 114595 .......... .......... .......... .......... .......... .......... 199 TATATCAAGT AAGGGACACA AGTCTACCAA AACTAGACAC AATATTCTGT ACTTTATTAC 114655 .......... .......... .......... .......... .......... .......... 199 ATATAGCATA TCATTCTTTG AAGCACTCAG GAATAACCCT TATCATCTTT ATGTAATCCT 114715 .......... .......... .......... .......... .......... .......... 199 ATACATTATT ATAACATCAT AATTATAACC ATCATAGACT CATATAGTCA AGTAGGAACA 114775 .......... .......... .......... .......... .......... .......... 199 ATCATGCATC AACTCTAAGA CTACACACCC AAGCACATAG TCATAGTCTA AATGACCACC 114835 .......... .......... .......... .......... .......... .......... 199 TAACATCAAT AGAAGAATAT ATACTTTCAC ATTGATCACA TGTAGATATA TATGCTCATA 114895 .......... .......... .......... .......... .......... .......... 199 CTTCACATAA ATAAACTACA CAAATCATCA TAATACTTCA ATTAGTTTGC CGATGAGGCC 114955 .......... .......... .......... .......... .......... .......... 199 ATGATCATCA TAATACATAA AGTAACACCG ACAAGGCCAT ATCAATTGCA AGTAAACCAC 115015 .......... .......... .......... .......... .......... .......... 199 ATAGCACCGA CACCATAAGC GTACAATACC AATTACAACA TAATTGAATT ATAATTAATA 115075 .......... .......... .......... .......... .......... .......... 199 TAAAATAAAG AGAATTATGG AAGCATACCA CCAATACATT CTCCCCACTT CAATCCATAC 115135 .......... .......... .......... .......... .......... .......... 199 CTAATAATCC AATTCAATAC CATAAGGCCA TTACCAATGT CTATGAATAA TAATTCAATA 115195 .......... .......... .......... .......... .......... .......... 199 CAAAACTATA ATATTCAATG AATCTAGGTC AATTCAATAT ATGTTTAGCA ATATAAGACC 115255 .......... .......... .......... .......... .......... .......... 199 AATTAGACAT CAATTAAATA CAATTATTAC ATCATTCAAT AGCCCATAGA AAACTACACT 115315 .......... .......... .......... .......... .......... .......... 199 AGAATTCATA AGCATTAAGT CAATATCACT TAACCCATAA GTAGTCAAAA ACTAGGATTC 115375 .......... .......... .......... .......... .......... .......... 199 ATCAATTACA TGGGTTCATA GGCTAATTGA GTTAGAATCA TATAATTAAC AAATATTCAA 115435 .......... .......... .......... .......... .......... .......... 199 TCAATATACA ATGATTTAAA ACCTTTAATG CAAGAACCTA CGGATAGATA ATAAAATTAG 115495 .......... .......... .......... .......... .......... .......... 199 ACAATTCATC TTTGAAAACT TTAGAAAACT CTTTGAATGT TGGGCTCCTT AATTAATAAA 115555 .......... .......... .......... .......... .......... .......... 199 GTTTCAAGGA TAACAAATCA TACCTCAATG ATGTTATTCC ACCAATTTGA TGAATAATCA 115615 .......... .......... .......... .......... .......... .......... 199 CCACTCAATT ATCCAATCCA AGCTCTTCCT TGAGTTTTGT TCCAATAGAG TTCTAGAGAA 115675 .......... .......... .......... .......... .......... .......... 199 TTTCTAAGGG AATTTGGGTT TTGATTTTGA AGAATGAATT CTTCTGAATG TAAAAGGCTA 115735 .......... .......... .......... .......... .......... .......... 199 ATAAACATGT TTAGAATACC CAAAATACCC CAACCAACAG ACTGTTCTGT TGGTCTATTG 115795 .......... .......... .......... .......... .......... .......... 199 TTTGGGATTG AGGCTGGTAC TTGGCTTGGT CATTTCCCAC TCCTAAGTAC TGACCATGAC 115855 .......... .......... .......... .......... .......... .......... 199 ACCCATCGAC GGGGCATCAA CTGTCCCACG AGCCGTCTAC TAACTCTGTC GTTTGGGGCT 115915 .......... .......... .......... .......... .......... .......... 199 GTCTTGGCTT CAAGGAAAGG GTCCTTCCTC AAGGACCCTT GGTTGGTCCT TGGGGACTTT 115975 .......... .......... .......... .......... .......... .......... 199 CACCCAGACG TTTACACTCC AAATATGTTT ATATACAAGT TTATTACCTC TCACATGAAT 116035 .......... .......... .......... .......... .......... .......... 199 TTCATAAAAA ACGAACTCGT AAAACTCAAC GAATCATTCC AAGACACACA AGGTCGTTTC 116095 .......... .......... .......... .......... .......... .......... 199 AAGGAAAACC TTTTGAATAT TATAGACGTT CTTGGACATT TGACCTCCAA ACTTCACGAA 116155 .......... .......... .......... .......... .......... .......... 199 ACTTGACGTG TTGACTATAA ACACTATATT AACTCCTAAT AAGAACCTCA TTAATTCAGA 116215 .......... .......... .......... .......... .......... .......... 199 AAACACACAT ATAGACACAT AATCACACAT GAGGCACATA TGTGCCTTAG TTGTCCAACG 116275 .......... .......... .......... .......... .......... .......... 199 TCTTAGTCAT CCCTTGATGT TTGACTTCTA ATGCACCTAA ACTCTTAGAC ACTGCCTCAA 116335 .......... .......... .......... .......... .......... .......... 199 TATCAAATTA TAAAACATTT TAGGACCTTA GACCATCGTG AAAACCATGT TAGGATCAAG 116395 .......... .......... .......... .......... .......... .......... 199 CTTCGCCTAA GTCATTTTCA AGGTATTACA ATTCCATTAC TCTCTATATA TTCCGCTTCC 116455 ||||||| || |||||||||| ||| |||||| .......... .......... .......... ATTCCATCAC TCTCTATATA TTCGGCTTCC 229 GCAACAATTG GTATCAGAGC CAAGATTTAT CTGAGTATGC TCTATGGTGC AGCATAGCCT 116515 ||||| || GCAAC-ATCA .......... .......... .......... .......... .......... 238 GAACTTCCAC ATTATAAAAA GATTCACTTT GGACATTTAA CTATTAGCTA GTAAATAGTA 116575 .......... .......... .......... .......... .......... .......... 238 TTTGTAGTAA AATGATAGAC AAGAAAACGA TGAGTCCACA TTGAGTGTCA ATAATACGTC 116635 .......... .......... .......... .......... .......... .......... 238 ATCATTGGCA TCTTCGCTTA TGACGAGAAT TGTGTCAAAT GTCAAATTTG CAGTTAAAAT 116695 .......... .......... .......... .......... .......... .......... 238 TTTTGATGGA TCAGGACATT TCAGACTGTG GTGAG 116730 || || ||| | | |||| .......... ....GAGATA TCACATCCTT ATGAG 259 hqPGS_C01HBa0163B20.1+_SGN-E390507+ (112317 112514,116426 116465,116710 116730) ******************************************************************************** EST sequence 12 +strand 674 n (File: SGN-E326330+) 1 TCCTTAAGGC ATTTGTTCTT CTTTCTCTCT TGTAGTATTT CACTTGTACT CTTTTGGAGT 61 GAAATAAATA TTGGTTGGTT GTGTCCGAGG AGTAGGCAAA AGAAAACAAA AGTTTGCCGA 121 ACCTCGTTAA TTCTTGGTGT TCTTTCTCTT GTTGTCTCAT TTACTATTTA TTAGTTACCT 181 TTAGATATAG TAGTTGTGAT TCCATCACTC TCTATATATT CGGCTTCCGC AACATCAGAG 241 ATATCACATC CTTATGAGTT TACATTATTC TTAGAGAAGC AAAAATTACT GTGACAAATG 301 AATAAGATAG CTAATTAGAT TTCCTCTTTC TAAAGTGTCC ACAACTTAAG CCCCTTGTTA 361 TGCCTTCTTG GGACAAAATT AAAAAGCGAA CAATGAGCAG GGATATTCAT ATATGGAAAG 421 ATCTTGAATC ACTAACAATG CAAAGGATAA ATAATCATGC ACGTGTCATC GAGAAAATTG 481 GAAGGAGTTG CAAAAATATT TCCAAGCTCA AAGTTGTGGG GCCCTATGAT ATGCTCTTTG 541 CATCTACATT GGATTCATTT CTTCAAAACT TGGAATTATT GAGTCTGAGG TGCATAGTGT 601 TATCTAAACC TTCTCTGACT CTAATCTTGG GAGAGTTAAA AAAAGTTGAA AGTGCTCAAC 661 ATATCTCATT ACAT Predicted gene structure (within gDNA segment 111258 to 118448): Exon 1 112321 112514 ( 194 n); cDNA 5 198 ( 194 n); score: 0.907 Intron 1 112515 116425 (3911 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.88) Exon 2 116426 116465 ( 40 n); cDNA 199 237 ( 39 n); score: 0.875 Intron 2 116466 116709 ( 244 n); Pd: 0.000 (s: 0.88), Pa: 0.869 (s: 0) Exon 3 116710 116730 ( 21 n); cDNA 238 258 ( 21 n); score: 0.619 MATCH C01HBa0163B20.1+ SGN-E326330+ 0.907 255 0.378 C PGS_C01HBa0163B20.1+_SGN-E326330+ (112321 112514,116426 116465,116710 116730) Alignment (genomic DNA sequence = upper lines): TAATACATTT GTTCTTCTTC CCATCTTGTA GTATTTTACT TGTAATTTTT TGGAGTGAAA 112380 ||| ||||| ||||||||| | ||||||| |||||| ||| |||| | ||| |||||||||| TAAGGCATTT GTTCTTCTTT CTCTCTTGTA GTATTTCACT TGTACTCTTT TGGAGTGAAA 64 TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AATAAAATTT TACCGAACCT 112440 |||||||||| |||||||||| |||||||||| |||||||||| || |||| || | |||||||| TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AACAAAAGTT TGCCGAACCT 124 CGTTAATTCT TGGTATTCCT TTTATTGTTG TCTTATTTAC TATTTATTAG CTACCTTTAG 112500 |||||||||| |||| ||| | | | |||||| ||| |||||| |||||||||| ||||||||| CGTTAATTCT TGGTGTTCTT TCTCTTGTTG TCTCATTTAC TATTTATTAG TTACCTTTAG 184 TTATAGTAGT TGTGATTCAT GTCACATCCC GAGACCACAA CCTATAATAT ATGGCCCTCT 112560 ||||||||| |||| ATATAGTAGT TGTG...... .......... .......... .......... .......... 198 CGGAGTGCAA CCGGCGTACT TGACCTCTCG GAGGTCTTGT ACAAGCCCTT CCATATCGTT 112620 .......... .......... .......... .......... .......... .......... 198 CATCACATAT AAACATATGA AAGTAGTGCA GAATTAAAAC TTTTGATAAA CATTCTATAA 112680 .......... .......... .......... .......... .......... .......... 198 TTCTTTAAAA ACTCTTTCAT ATAAAACTCA TAGGATATAC TAAGTCTCAT TTCATCAAAT 112740 .......... .......... .......... .......... .......... .......... 198 CTTAGACACA AGAGTACTTT GGGGCATGGC CCATAGACAA TAGAAATACA ATATTACTAA 112800 .......... .......... .......... .......... .......... .......... 198 GTCTATTACA ATAGTTTGAT AAGGGAAATA AAAGACATTT ATGCCCTCGA GTCAAATGAG 112860 .......... .......... .......... .......... .......... .......... 198 GACATACTTC AACTAGCTTG AACAATCTTC TAATCCAAGT TTTGCTCTCC AAAAGCACCT 112920 .......... .......... .......... .......... .......... .......... 198 TCACCTATGA ATCACTTTAG AGATAGATAA AATCATGGAA TTAGTACAAT CACATTTATT 112980 .......... .......... .......... .......... .......... .......... 198 AAGTATGACA TAATACATAA AAATCATGAA AATGGACATT TGTTGAAAAT ATGCATCATT 113040 .......... .......... .......... .......... .......... .......... 198 TGATTTAAAT ATCATAATAA CAACATTTAA CAACTTAGAA ACACATAAGA AATTAATTAG 113100 .......... .......... .......... .......... .......... .......... 198 CCAATTTATC ACATTTTTAA GGCAACTTTA CGATGAACTA CTTCACTGTA CAGTGAACTC 113160 .......... .......... .......... .......... .......... .......... 198 CTTCACTATT ACAGTGAAGT TTCTTACCTT CACTTTAGAC ACCTTCTATC ATGTAATCCT 113220 .......... .......... .......... .......... .......... .......... 198 CTCACTAAAA GCTATCCTAA AACTCATTTA AGTAAGACAA AGAGAGATCG CTCATACAAC 113280 .......... .......... .......... .......... .......... .......... 198 CTCTCTAGGC ACACCTAAAT GATCTTTAAG ACCACCTATA ATGAGATCAA CACACACTTA 113340 .......... .......... .......... .......... .......... .......... 198 CAAGACACCA AACATATGAA CATGAGATTC TTCTACCAAA GGTGATTCAA AGTCTCACTT 113400 .......... .......... .......... .......... .......... .......... 198 GAGTGTATTG TGAAGCGACC GCCCATACAA TCCCTTACAC ACACTTAAGA TATCTTATAG 113460 .......... .......... .......... .......... .......... .......... 198 ACTACCTAAG ATAGAATCCT TCTAACTTAA TACAACAACA TATAGATGAT ATGACATTCT 113520 .......... .......... .......... .......... .......... .......... 198 CCTTCCAAAG GCTATCAAAA TACTTACTTA AGTAAATCAA GAAGATAACG TTCATATTGA 113580 .......... .......... .......... .......... .......... .......... 198 CCTATTCAAG ATTACCAAAA TAATCTTTAA GACTACCTAA GGCTTAGATC ATGTCTACAT 113640 .......... .......... .......... .......... .......... .......... 198 AATCAACCAT CTTCCCTAAG TAGAGTCATT CTTAGGACTT ATCTAGGTAA GATACGAAGT 113700 .......... .......... .......... .......... .......... .......... 198 GACCATTCTT ATGCCCCCTT CACACCTTAA CTAGACAACT ATTAACTACT ATAGATAAGT 113760 .......... .......... .......... .......... .......... .......... 198 ACTTATTCAT TTAACATACT TTCTTAACTT AATTCATTAC ATTCATTTAA GACTCATTCA 113820 .......... .......... .......... .......... .......... .......... 198 TCACATAAGG ACATTCAAGT AATGGTCTTG GACAACACCT AGGGACTCTA ACTAACATCT 113880 .......... .......... .......... .......... .......... .......... 198 TCAAAACTAA CATCTTCAAA GTCTATTGTG CAATGTCTAG ATAGTATCTC ATACCATCAC 113940 .......... .......... .......... .......... .......... .......... 198 CTAAACTTCA TTGAACTTCT CTAATGCTAG TAGGTATCCC ATATGATAAG AATAAACAAT 114000 .......... .......... .......... .......... .......... .......... 198 AAACAACATA GAAAATGATA GATAAATTTG GAGTTCTAAC CTACTCCAAT GAGGGTGTTC 114060 .......... .......... .......... .......... .......... .......... 198 TACTTGCCAA GTGTAGAAGT AGCACACATC CATGTAGGCA CATAACAATA AGGAATATGA 114120 .......... .......... .......... .......... .......... .......... 198 CGGGCTTTTA TGCACTCTAG TCATTCTCAA GTAGAGATAC ATTGTACTCT AGTCTCATTT 114180 .......... .......... .......... .......... .......... .......... 198 TCAAGTAGAG CTACTTCTTA TAACATACTC ACTCGGTGCT AGCGTTTGTT CTCATAGAGT 114240 .......... .......... .......... .......... .......... .......... 198 CATTTGAATT AAAGGTTCAT ATAAAGGAGT TCAAAATCTA GTTCATAACC CAATCACATT 114300 .......... .......... .......... .......... .......... .......... 198 CACCCTACCA AAGATGTCCT CTAGGAATAC CATAGAATTG CGACAAAGAT AGATCATTAT 114360 .......... .......... .......... .......... .......... .......... 198 GACTTTCCTA AGGATGATAT GATGTCGTTC AACCAATCAA CCCTAAGTCA TTCATTACAT 114420 .......... .......... .......... .......... .......... .......... 198 GAAGGATACC ATTACGATTT TTTACTTTCA CATTCATAAC CTTACCACTA GGTTTAAGGT 114480 .......... .......... .......... .......... .......... .......... 198 TCCACGCATA TGACCTTCGT AACATAATTC AAGGTCTCAC ATATAATTCA TTCATACATG 114540 .......... .......... .......... .......... .......... .......... 198 ACAAGGGTGC ACTAAGATTA CCTAGTAAAG ACATCTTACA TTCACATATC ATTCATATAT 114600 .......... .......... .......... .......... .......... .......... 198 CAAGTAAGGG ACACAAGTCT ACCAAAACTA GACACAATAT TCTGTACTTT ATTACATATA 114660 .......... .......... .......... .......... .......... .......... 198 GCATATCATT CTTTGAAGCA CTCAGGAATA ACCCTTATCA TCTTTATGTA ATCCTATACA 114720 .......... .......... .......... .......... .......... .......... 198 TTATTATAAC ATCATAATTA TAACCATCAT AGACTCATAT AGTCAAGTAG GAACAATCAT 114780 .......... .......... .......... .......... .......... .......... 198 GCATCAACTC TAAGACTACA CACCCAAGCA CATAGTCATA GTCTAAATGA CCACCTAACA 114840 .......... .......... .......... .......... .......... .......... 198 TCAATAGAAG AATATATACT TTCACATTGA TCACATGTAG ATATATATGC TCATACTTCA 114900 .......... .......... .......... .......... .......... .......... 198 CATAAATAAA CTACACAAAT CATCATAATA CTTCAATTAG TTTGCCGATG AGGCCATGAT 114960 .......... .......... .......... .......... .......... .......... 198 CATCATAATA CATAAAGTAA CACCGACAAG GCCATATCAA TTGCAAGTAA ACCACATAGC 115020 .......... .......... .......... .......... .......... .......... 198 ACCGACACCA TAAGCGTACA ATACCAATTA CAACATAATT GAATTATAAT TAATATAAAA 115080 .......... .......... .......... .......... .......... .......... 198 TAAAGAGAAT TATGGAAGCA TACCACCAAT ACATTCTCCC CACTTCAATC CATACCTAAT 115140 .......... .......... .......... .......... .......... .......... 198 AATCCAATTC AATACCATAA GGCCATTACC AATGTCTATG AATAATAATT CAATACAAAA 115200 .......... .......... .......... .......... .......... .......... 198 CTATAATATT CAATGAATCT AGGTCAATTC AATATATGTT TAGCAATATA AGACCAATTA 115260 .......... .......... .......... .......... .......... .......... 198 GACATCAATT AAATACAATT ATTACATCAT TCAATAGCCC ATAGAAAACT ACACTAGAAT 115320 .......... .......... .......... .......... .......... .......... 198 TCATAAGCAT TAAGTCAATA TCACTTAACC CATAAGTAGT CAAAAACTAG GATTCATCAA 115380 .......... .......... .......... .......... .......... .......... 198 TTACATGGGT TCATAGGCTA ATTGAGTTAG AATCATATAA TTAACAAATA TTCAATCAAT 115440 .......... .......... .......... .......... .......... .......... 198 ATACAATGAT TTAAAACCTT TAATGCAAGA ACCTACGGAT AGATAATAAA ATTAGACAAT 115500 .......... .......... .......... .......... .......... .......... 198 TCATCTTTGA AAACTTTAGA AAACTCTTTG AATGTTGGGC TCCTTAATTA ATAAAGTTTC 115560 .......... .......... .......... .......... .......... .......... 198 AAGGATAACA AATCATACCT CAATGATGTT ATTCCACCAA TTTGATGAAT AATCACCACT 115620 .......... .......... .......... .......... .......... .......... 198 CAATTATCCA ATCCAAGCTC TTCCTTGAGT TTTGTTCCAA TAGAGTTCTA GAGAATTTCT 115680 .......... .......... .......... .......... .......... .......... 198 AAGGGAATTT GGGTTTTGAT TTTGAAGAAT GAATTCTTCT GAATGTAAAA GGCTAATAAA 115740 .......... .......... .......... .......... .......... .......... 198 CATGTTTAGA ATACCCAAAA TACCCCAACC AACAGACTGT TCTGTTGGTC TATTGTTTGG 115800 .......... .......... .......... .......... .......... .......... 198 GATTGAGGCT GGTACTTGGC TTGGTCATTT CCCACTCCTA AGTACTGACC ATGACACCCA 115860 .......... .......... .......... .......... .......... .......... 198 TCGACGGGGC ATCAACTGTC CCACGAGCCG TCTACTAACT CTGTCGTTTG GGGCTGTCTT 115920 .......... .......... .......... .......... .......... .......... 198 GGCTTCAAGG AAAGGGTCCT TCCTCAAGGA CCCTTGGTTG GTCCTTGGGG ACTTTCACCC 115980 .......... .......... .......... .......... .......... .......... 198 AGACGTTTAC ACTCCAAATA TGTTTATATA CAAGTTTATT ACCTCTCACA TGAATTTCAT 116040 .......... .......... .......... .......... .......... .......... 198 AAAAAACGAA CTCGTAAAAC TCAACGAATC ATTCCAAGAC ACACAAGGTC GTTTCAAGGA 116100 .......... .......... .......... .......... .......... .......... 198 AAACCTTTTG AATATTATAG ACGTTCTTGG ACATTTGACC TCCAAACTTC ACGAAACTTG 116160 .......... .......... .......... .......... .......... .......... 198 ACGTGTTGAC TATAAACACT ATATTAACTC CTAATAAGAA CCTCATTAAT TCAGAAAACA 116220 .......... .......... .......... .......... .......... .......... 198 CACATATAGA CACATAATCA CACATGAGGC ACATATGTGC CTTAGTTGTC CAACGTCTTA 116280 .......... .......... .......... .......... .......... .......... 198 GTCATCCCTT GATGTTTGAC TTCTAATGCA CCTAAACTCT TAGACACTGC CTCAATATCA 116340 .......... .......... .......... .......... .......... .......... 198 AATTATAAAA CATTTTAGGA CCTTAGACCA TCGTGAAAAC CATGTTAGGA TCAAGCTTCG 116400 .......... .......... .......... .......... .......... .......... 198 CCTAAGTCAT TTTCAAGGTA TTACAATTCC ATTACTCTCT ATATATTCCG CTTCCGCAAC 116460 ||||| || ||||||| |||||||| | |||||||||| .......... .......... .....ATTCC ATCACTCTCT ATATATTCGG CTTCCGCAAC 233 AATTGGTATC AGAGCCAAGA TTTATCTGAG TATGCTCTAT GGTGCAGCAT AGCCTGAACT 116520 || -ATCA..... .......... .......... .......... .......... .......... 237 TCCACATTAT AAAAAGATTC ACTTTGGACA TTTAACTATT AGCTAGTAAA TAGTATTTGT 116580 .......... .......... .......... .......... .......... .......... 237 AGTAAAATGA TAGACAAGAA AACGATGAGT CCACATTGAG TGTCAATAAT ACGTCATCAT 116640 .......... .......... .......... .......... .......... .......... 237 TGGCATCTTC GCTTATGACG AGAATTGTGT CAAATGTCAA ATTTGCAGTT AAAATTTTTG 116700 .......... .......... .......... .......... .......... .......... 237 ATGGATCAGG ACATTTCAGA CTGTGGTGAG 116730 | | || ||| | | |||| .........G AGATATCACA TCCTTATGAG 258 hqPGS_C01HBa0163B20.1+_SGN-E326330+ (112321 112514,116426 116465,116710 116730) ******************************************************************************** EST sequence 50 +strand 675 n (File: SGN-E324513+) 1 TCCTTAAAGC ATTTGTTCTT CTTTCTCTCT TGTAGTATTT CACTTGTACT CTTTTGGAGT 61 GAAATAAATA TTGGTTGGTT GTGTCCGAAG AGTAGGCAAA AGAAAACAAA AGTTTGCCGA 121 ACCTCGTTAA TTCTTGGTGT TCTTTCTCTT GTTGTCTCAT TTACTATTTA TTAGTTACCT 181 TTAGATATAG TAGTTGTGAT TCCATCACTC TCTATATATT CGGCTTCCGC AACATCAGAG 241 ATATCACATC CTTATGAGTT TACATTATTC TTAGAGAAGC AAAAATTACT GTGACAAATG 301 AATAAGATAG CTAATTAGAT TTCCTCTTTC TAAAGTGTCC ACAACTTAAG CCCCTTGTTA 361 TGCCTTCTTG GGACAAAATT AAAAAGCGAA CAATGAGCAG GGATATTCAT ATATGGAAAG 421 ATCTTGAATC ACTAACAATG CAAAGGATAA ATAATCATGC ACGTGTCATC GAGAAAATTG 481 GAAGGAGTTG CAAAAATATT TCCAAGCTCA AAGTTGTGGG GCCCTATGAT ATGCTCTTTG 541 CATCTACATT GGATTCATTT CTTCAAAACT TGGAATTATT GAGTCTGAGG TGCATAGTGT 601 TATCTAAACC TTCTCTGACT CTAATCTTGG GAGAGTTAAA AAAAGTTGAA AGTGCTCAAC 661 ATATCTCATT ACATA Predicted gene structure (within gDNA segment 111258 to 117858): Exon 1 112321 112514 ( 194 n); cDNA 5 198 ( 194 n); score: 0.902 Intron 1 112515 116425 (3911 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0.88) Exon 2 116426 116465 ( 40 n); cDNA 199 237 ( 39 n); score: 0.875 Intron 2 116466 116709 ( 244 n); Pd: 0.000 (s: 0.88), Pa: 0.869 (s: 0) Exon 3 116710 116730 ( 21 n); cDNA 238 258 ( 21 n); score: 0.619 MATCH C01HBa0163B20.1+ SGN-E324513+ 0.902 255 0.378 C PGS_C01HBa0163B20.1+_SGN-E324513+ (112321 112514,116426 116465,116710 116730) Alignment (genomic DNA sequence = upper lines): TAATACATTT GTTCTTCTTC CCATCTTGTA GTATTTTACT TGTAATTTTT TGGAGTGAAA 112380 ||| ||||| ||||||||| | ||||||| |||||| ||| |||| | ||| |||||||||| TAAAGCATTT GTTCTTCTTT CTCTCTTGTA GTATTTCACT TGTACTCTTT TGGAGTGAAA 64 TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AATAAAATTT TACCGAACCT 112440 |||||||||| |||||||||| |||| ||||| |||||||||| || |||| || | |||||||| TAAATATTGG TTGGTTGTGT CCGAAGAGTA GGCAAAAGAA AACAAAAGTT TGCCGAACCT 124 CGTTAATTCT TGGTATTCCT TTTATTGTTG TCTTATTTAC TATTTATTAG CTACCTTTAG 112500 |||||||||| |||| ||| | | | |||||| ||| |||||| |||||||||| ||||||||| CGTTAATTCT TGGTGTTCTT TCTCTTGTTG TCTCATTTAC TATTTATTAG TTACCTTTAG 184 TTATAGTAGT TGTGATTCAT GTCACATCCC GAGACCACAA CCTATAATAT ATGGCCCTCT 112560 ||||||||| |||| ATATAGTAGT TGTG...... .......... .......... .......... .......... 198 CGGAGTGCAA CCGGCGTACT TGACCTCTCG GAGGTCTTGT ACAAGCCCTT CCATATCGTT 112620 .......... .......... .......... .......... .......... .......... 198 CATCACATAT AAACATATGA AAGTAGTGCA GAATTAAAAC TTTTGATAAA CATTCTATAA 112680 .......... .......... .......... .......... .......... .......... 198 TTCTTTAAAA ACTCTTTCAT ATAAAACTCA TAGGATATAC TAAGTCTCAT TTCATCAAAT 112740 .......... .......... .......... .......... .......... .......... 198 CTTAGACACA AGAGTACTTT GGGGCATGGC CCATAGACAA TAGAAATACA ATATTACTAA 112800 .......... .......... .......... .......... .......... .......... 198 GTCTATTACA ATAGTTTGAT AAGGGAAATA AAAGACATTT ATGCCCTCGA GTCAAATGAG 112860 .......... .......... .......... .......... .......... .......... 198 GACATACTTC AACTAGCTTG AACAATCTTC TAATCCAAGT TTTGCTCTCC AAAAGCACCT 112920 .......... .......... .......... .......... .......... .......... 198 TCACCTATGA ATCACTTTAG AGATAGATAA AATCATGGAA TTAGTACAAT CACATTTATT 112980 .......... .......... .......... .......... .......... .......... 198 AAGTATGACA TAATACATAA AAATCATGAA AATGGACATT TGTTGAAAAT ATGCATCATT 113040 .......... .......... .......... .......... .......... .......... 198 TGATTTAAAT ATCATAATAA CAACATTTAA CAACTTAGAA ACACATAAGA AATTAATTAG 113100 .......... .......... .......... .......... .......... .......... 198 CCAATTTATC ACATTTTTAA GGCAACTTTA CGATGAACTA CTTCACTGTA CAGTGAACTC 113160 .......... .......... .......... .......... .......... .......... 198 CTTCACTATT ACAGTGAAGT TTCTTACCTT CACTTTAGAC ACCTTCTATC ATGTAATCCT 113220 .......... .......... .......... .......... .......... .......... 198 CTCACTAAAA GCTATCCTAA AACTCATTTA AGTAAGACAA AGAGAGATCG CTCATACAAC 113280 .......... .......... .......... .......... .......... .......... 198 CTCTCTAGGC ACACCTAAAT GATCTTTAAG ACCACCTATA ATGAGATCAA CACACACTTA 113340 .......... .......... .......... .......... .......... .......... 198 CAAGACACCA AACATATGAA CATGAGATTC TTCTACCAAA GGTGATTCAA AGTCTCACTT 113400 .......... .......... .......... .......... .......... .......... 198 GAGTGTATTG TGAAGCGACC GCCCATACAA TCCCTTACAC ACACTTAAGA TATCTTATAG 113460 .......... .......... .......... .......... .......... .......... 198 ACTACCTAAG ATAGAATCCT TCTAACTTAA TACAACAACA TATAGATGAT ATGACATTCT 113520 .......... .......... .......... .......... .......... .......... 198 CCTTCCAAAG GCTATCAAAA TACTTACTTA AGTAAATCAA GAAGATAACG TTCATATTGA 113580 .......... .......... .......... .......... .......... .......... 198 CCTATTCAAG ATTACCAAAA TAATCTTTAA GACTACCTAA GGCTTAGATC ATGTCTACAT 113640 .......... .......... .......... .......... .......... .......... 198 AATCAACCAT CTTCCCTAAG TAGAGTCATT CTTAGGACTT ATCTAGGTAA GATACGAAGT 113700 .......... .......... .......... .......... .......... .......... 198 GACCATTCTT ATGCCCCCTT CACACCTTAA CTAGACAACT ATTAACTACT ATAGATAAGT 113760 .......... .......... .......... .......... .......... .......... 198 ACTTATTCAT TTAACATACT TTCTTAACTT AATTCATTAC ATTCATTTAA GACTCATTCA 113820 .......... .......... .......... .......... .......... .......... 198 TCACATAAGG ACATTCAAGT AATGGTCTTG GACAACACCT AGGGACTCTA ACTAACATCT 113880 .......... .......... .......... .......... .......... .......... 198 TCAAAACTAA CATCTTCAAA GTCTATTGTG CAATGTCTAG ATAGTATCTC ATACCATCAC 113940 .......... .......... .......... .......... .......... .......... 198 CTAAACTTCA TTGAACTTCT CTAATGCTAG TAGGTATCCC ATATGATAAG AATAAACAAT 114000 .......... .......... .......... .......... .......... .......... 198 AAACAACATA GAAAATGATA GATAAATTTG GAGTTCTAAC CTACTCCAAT GAGGGTGTTC 114060 .......... .......... .......... .......... .......... .......... 198 TACTTGCCAA GTGTAGAAGT AGCACACATC CATGTAGGCA CATAACAATA AGGAATATGA 114120 .......... .......... .......... .......... .......... .......... 198 CGGGCTTTTA TGCACTCTAG TCATTCTCAA GTAGAGATAC ATTGTACTCT AGTCTCATTT 114180 .......... .......... .......... .......... .......... .......... 198 TCAAGTAGAG CTACTTCTTA TAACATACTC ACTCGGTGCT AGCGTTTGTT CTCATAGAGT 114240 .......... .......... .......... .......... .......... .......... 198 CATTTGAATT AAAGGTTCAT ATAAAGGAGT TCAAAATCTA GTTCATAACC CAATCACATT 114300 .......... .......... .......... .......... .......... .......... 198 CACCCTACCA AAGATGTCCT CTAGGAATAC CATAGAATTG CGACAAAGAT AGATCATTAT 114360 .......... .......... .......... .......... .......... .......... 198 GACTTTCCTA AGGATGATAT GATGTCGTTC AACCAATCAA CCCTAAGTCA TTCATTACAT 114420 .......... .......... .......... .......... .......... .......... 198 GAAGGATACC ATTACGATTT TTTACTTTCA CATTCATAAC CTTACCACTA GGTTTAAGGT 114480 .......... .......... .......... .......... .......... .......... 198 TCCACGCATA TGACCTTCGT AACATAATTC AAGGTCTCAC ATATAATTCA TTCATACATG 114540 .......... .......... .......... .......... .......... .......... 198 ACAAGGGTGC ACTAAGATTA CCTAGTAAAG ACATCTTACA TTCACATATC ATTCATATAT 114600 .......... .......... .......... .......... .......... .......... 198 CAAGTAAGGG ACACAAGTCT ACCAAAACTA GACACAATAT TCTGTACTTT ATTACATATA 114660 .......... .......... .......... .......... .......... .......... 198 GCATATCATT CTTTGAAGCA CTCAGGAATA ACCCTTATCA TCTTTATGTA ATCCTATACA 114720 .......... .......... .......... .......... .......... .......... 198 TTATTATAAC ATCATAATTA TAACCATCAT AGACTCATAT AGTCAAGTAG GAACAATCAT 114780 .......... .......... .......... .......... .......... .......... 198 GCATCAACTC TAAGACTACA CACCCAAGCA CATAGTCATA GTCTAAATGA CCACCTAACA 114840 .......... .......... .......... .......... .......... .......... 198 TCAATAGAAG AATATATACT TTCACATTGA TCACATGTAG ATATATATGC TCATACTTCA 114900 .......... .......... .......... .......... .......... .......... 198 CATAAATAAA CTACACAAAT CATCATAATA CTTCAATTAG TTTGCCGATG AGGCCATGAT 114960 .......... .......... .......... .......... .......... .......... 198 CATCATAATA CATAAAGTAA CACCGACAAG GCCATATCAA TTGCAAGTAA ACCACATAGC 115020 .......... .......... .......... .......... .......... .......... 198 ACCGACACCA TAAGCGTACA ATACCAATTA CAACATAATT GAATTATAAT TAATATAAAA 115080 .......... .......... .......... .......... .......... .......... 198 TAAAGAGAAT TATGGAAGCA TACCACCAAT ACATTCTCCC CACTTCAATC CATACCTAAT 115140 .......... .......... .......... .......... .......... .......... 198 AATCCAATTC AATACCATAA GGCCATTACC AATGTCTATG AATAATAATT CAATACAAAA 115200 .......... .......... .......... .......... .......... .......... 198 CTATAATATT CAATGAATCT AGGTCAATTC AATATATGTT TAGCAATATA AGACCAATTA 115260 .......... .......... .......... .......... .......... .......... 198 GACATCAATT AAATACAATT ATTACATCAT TCAATAGCCC ATAGAAAACT ACACTAGAAT 115320 .......... .......... .......... .......... .......... .......... 198 TCATAAGCAT TAAGTCAATA TCACTTAACC CATAAGTAGT CAAAAACTAG GATTCATCAA 115380 .......... .......... .......... .......... .......... .......... 198 TTACATGGGT TCATAGGCTA ATTGAGTTAG AATCATATAA TTAACAAATA TTCAATCAAT 115440 .......... .......... .......... .......... .......... .......... 198 ATACAATGAT TTAAAACCTT TAATGCAAGA ACCTACGGAT AGATAATAAA ATTAGACAAT 115500 .......... .......... .......... .......... .......... .......... 198 TCATCTTTGA AAACTTTAGA AAACTCTTTG AATGTTGGGC TCCTTAATTA ATAAAGTTTC 115560 .......... .......... .......... .......... .......... .......... 198 AAGGATAACA AATCATACCT CAATGATGTT ATTCCACCAA TTTGATGAAT AATCACCACT 115620 .......... .......... .......... .......... .......... .......... 198 CAATTATCCA ATCCAAGCTC TTCCTTGAGT TTTGTTCCAA TAGAGTTCTA GAGAATTTCT 115680 .......... .......... .......... .......... .......... .......... 198 AAGGGAATTT GGGTTTTGAT TTTGAAGAAT GAATTCTTCT GAATGTAAAA GGCTAATAAA 115740 .......... .......... .......... .......... .......... .......... 198 CATGTTTAGA ATACCCAAAA TACCCCAACC AACAGACTGT TCTGTTGGTC TATTGTTTGG 115800 .......... .......... .......... .......... .......... .......... 198 GATTGAGGCT GGTACTTGGC TTGGTCATTT CCCACTCCTA AGTACTGACC ATGACACCCA 115860 .......... .......... .......... .......... .......... .......... 198 TCGACGGGGC ATCAACTGTC CCACGAGCCG TCTACTAACT CTGTCGTTTG GGGCTGTCTT 115920 .......... .......... .......... .......... .......... .......... 198 GGCTTCAAGG AAAGGGTCCT TCCTCAAGGA CCCTTGGTTG GTCCTTGGGG ACTTTCACCC 115980 .......... .......... .......... .......... .......... .......... 198 AGACGTTTAC ACTCCAAATA TGTTTATATA CAAGTTTATT ACCTCTCACA TGAATTTCAT 116040 .......... .......... .......... .......... .......... .......... 198 AAAAAACGAA CTCGTAAAAC TCAACGAATC ATTCCAAGAC ACACAAGGTC GTTTCAAGGA 116100 .......... .......... .......... .......... .......... .......... 198 AAACCTTTTG AATATTATAG ACGTTCTTGG ACATTTGACC TCCAAACTTC ACGAAACTTG 116160 .......... .......... .......... .......... .......... .......... 198 ACGTGTTGAC TATAAACACT ATATTAACTC CTAATAAGAA CCTCATTAAT TCAGAAAACA 116220 .......... .......... .......... .......... .......... .......... 198 CACATATAGA CACATAATCA CACATGAGGC ACATATGTGC CTTAGTTGTC CAACGTCTTA 116280 .......... .......... .......... .......... .......... .......... 198 GTCATCCCTT GATGTTTGAC TTCTAATGCA CCTAAACTCT TAGACACTGC CTCAATATCA 116340 .......... .......... .......... .......... .......... .......... 198 AATTATAAAA CATTTTAGGA CCTTAGACCA TCGTGAAAAC CATGTTAGGA TCAAGCTTCG 116400 .......... .......... .......... .......... .......... .......... 198 CCTAAGTCAT TTTCAAGGTA TTACAATTCC ATTACTCTCT ATATATTCCG CTTCCGCAAC 116460 ||||| || ||||||| |||||||| | |||||||||| .......... .......... .....ATTCC ATCACTCTCT ATATATTCGG CTTCCGCAAC 233 AATTGGTATC AGAGCCAAGA TTTATCTGAG TATGCTCTAT GGTGCAGCAT AGCCTGAACT 116520 || -ATCA..... .......... .......... .......... .......... .......... 237 TCCACATTAT AAAAAGATTC ACTTTGGACA TTTAACTATT AGCTAGTAAA TAGTATTTGT 116580 .......... .......... .......... .......... .......... .......... 237 AGTAAAATGA TAGACAAGAA AACGATGAGT CCACATTGAG TGTCAATAAT ACGTCATCAT 116640 .......... .......... .......... .......... .......... .......... 237 TGGCATCTTC GCTTATGACG AGAATTGTGT CAAATGTCAA ATTTGCAGTT AAAATTTTTG 116700 .......... .......... .......... .......... .......... .......... 237 ATGGATCAGG ACATTTCAGA CTGTGGTGAG 116730 | | || ||| | | |||| .........G AGATATCACA TCCTTATGAG 258 hqPGS_C01HBa0163B20.1+_SGN-E324513+ (112321 112514,116426 116465,116710 116730) ******************************************************************************** EST sequence 148 +strand 536 n (File: SGN-E300105+) 1 CTCGTGCCGT CTAAGCTAGT TTTTGAAGTA TGAGTTTGGC TCAAAGCCTA ATTTTAAATA 61 GTTTTCCCAC GCCATATGTG CAGTCTTGGA TATTGCAGGC TCATCTATAA ACATATTTTC 121 TGTACAAACA TCATATATTT GTGGACATCA GAAGCATGAA ACTTGATCAT TATACTGTTC 181 TAAATCTGCA AAAGAAAAAA AAGTTATGAT CATATAATAA TAATAATAAT TCTCCCAGCA 241 TCATAATTTG CCGGCAAGTT GTGATGCGAA TCCACCTATA CGTGAAGAAC ATAGTGTTAA 301 ATTTGACAAG ATTCAAAAAT GGATTAATGA GAAGATATGG TAGTTAGGAG GATAATTCTT 361 CATTGGTAGA AAAGTCAAGA TAGCACCTTT TGTAGGTGAA ATTTAAGTGA ACCATAAATT 421 GATTTCACAA GGTAAATCTT GACATTTTGA CATTGTGATG TCATGTATGA CATCAATAGG 481 AAGAATTCAC TCCTATAAAT AGGTCGCTCC TAATTCATTT GTAAAACACC TCTGAC Predicted gene structure (within gDNA segment 107861 to 113023): Exon 1 112072 112267 ( 196 n); cDNA 294 496 ( 203 n); score: 0.855 MATCH C01HBa0163B20.1+ SGN-E300105+ 0.855 196 0.366 C PGS_C01HBa0163B20.1+_SGN-E300105+ (112072 112267) Alignment (genomic DNA sequence = upper lines): GTGTTAAACT TGACAAGATT CAAAAATGGA TTAATGATAA GATATGGTAG TTAGAAGGAT 112131 |||||||| | |||||||||| |||||||||| ||||||| || |||||||||| |||| ||||| GTGTTAAATT TGACAAGATT CAAAAATGGA TTAATGAGAA GATATGGTAG TTAGGAGGAT 353 AATTCTTCAT TGGTAGAAAA GTCAAGAAAG CACC-TTTGT AGGTGAAATT TAGGTGAAAC 112190 |||||||||| |||||||||| ||||||| || |||| ||||| |||||||||| || ||||| | AATTCTTCAT TGGTAGAAAA GTCAAGATAG CACCTTTTGT AGGTGAAATT TAAGTGAACC 413 ATAAATTGGT TTCACGAGGT AAATCTTGAC ATATT----T TG--ATGTCA TGGATGACAT 112244 |||||||| | ||||| |||| |||||||||| || || | || |||||| || ||||||| ATAAATTGAT TTCACAAGGT AAATCTTGAC ATTTTGACAT TGTGATGTCA TGTATGACAT 473 TAATAGGAAG AATTCACTCC TAT 112267 ||||||||| |||||||||| ||| CAATAGGAAG AATTCACTCC TAT 496 hqPGS_C01HBa0163B20.1+_SGN-E300105+ (112072 112267) ******************************************************************************** EST sequence 113 +strand 356 n (File: SGN-E309926+) 1 TCTCCTAAGA CATTTGTTCT TCTTTCTCTC TTATAGTATT TCACTTATAC TCTTTTGGAG 61 TGAAATAAAT ATTGGTTGTT TGTGTCCGAG GAGTAGGCAA AAGAAAACAA AAGTTTGCCG 121 AACCTCATTA ATTCCTGGTG TTCTTTCTCT TGTTGTCTCA TTTACTATTT ATTAGCTACC 181 TTTAGATATA GTAGTTGTGA TTCCATCACT CTCTATATAT TCGACTTCCG CAACGACAGA 241 CAAAGCTTCA ATGTTAGATG AGATCATCGA TTATGTCAGG TTCCTCCAGC TCCAAGTCAA 301 AGTACTCTCT CTCTCTTCAC ATTTATTGTT CTTTGGCTTA AAAATTGGAA ACAGAT Predicted gene structure (within gDNA segment 111248 to 114658): Exon 1 112316 112518 ( 203 n); cDNA 1 203 ( 203 n); score: 0.897 MATCH C01HBa0163B20.1+ SGN-E309926+ 0.897 203 0.570 C PGS_C01HBa0163B20.1+_SGN-E309926+ (112316 112518) Alignment (genomic DNA sequence = upper lines): TCTCCTAATA CATTTGTTCT TCTTCCCATC TTGTAGTATT TTACTTGTAA TTTTTTGGAG 112375 |||||||| | |||||||||| |||| | || || ||||||| | |||| || | |||||||| TCTCCTAAGA CATTTGTTCT TCTTTCTCTC TTATAGTATT TCACTTATAC TCTTTTGGAG 60 TGAAATAAAT ATTGGTTGGT TGTGTCCGAG GAGTAGGCAA AAGAAAATAA AATTTTACCG 112435 |||||||||| |||||||| | |||||||||| |||||||||| ||||||| || || ||| ||| TGAAATAAAT ATTGGTTGTT TGTGTCCGAG GAGTAGGCAA AAGAAAACAA AAGTTTGCCG 120 AACCTCGTTA ATTCTTGGTA TTCCTTTTAT TGTTGTCTTA TTTACTATTT ATTAGCTACC 112495 |||||| ||| |||| |||| ||| || | | |||||||| | |||||||||| |||||||||| AACCTCATTA ATTCCTGGTG TTCTTTCTCT TGTTGTCTCA TTTACTATTT ATTAGCTACC 180 TTTAGTTATA GTAGTTGTGA TTC 112518 ||||| |||| |||||||||| ||| TTTAGATATA GTAGTTGTGA TTC 203 hqPGS_C01HBa0163B20.1+_SGN-E309926+ (112316 112518) ******************************************************************************** EST sequence 104 +strand 413 n (File: SGN-E378308+) 1 TCCTTAAGGC ATTTGTTCTT CTTTCTCTCT TGTAGTATTT CACTTGTACT CTTTTGGAGT 61 GAAATAAATA TTGGTTGGTT GTGTCCGAGG AGTAGGCAAA AGAAAACAAA AGTTTGCCGA 121 ACCTCGTTAA TTCTTGGTGT TCTTTCTCTT GTTGTCTCAT TTACTATTTA TTAGTTACCT 181 TTAGATATAG TAGTTGTGAT TCCATCACTC TCTATATATT CGGCTTCCGC AACATCAGAG 241 ATATCACATC CTTATGAGTT TACATTATTC TTAGAGAAGC AAAATTACTG TGACAAATGA 301 ATAAGATAGC TAATTAGATT TCCTCTTTCT AAAGTGTCCA CAACTTAAGC CCCTTGTTAT 361 GCCTTCTTGG GACAAAATTA AAAAGCGAAC AATGAGCAGG GATATTCATA TAT Predicted gene structure (within gDNA segment 111258 to 115238): Exon 1 112321 112518 ( 198 n); cDNA 5 202 ( 198 n); score: 0.909 MATCH C01HBa0163B20.1+ SGN-E378308+ 0.909 198 0.479 C PGS_C01HBa0163B20.1+_SGN-E378308+ (112321 112518) Alignment (genomic DNA sequence = upper lines): TAATACATTT GTTCTTCTTC CCATCTTGTA GTATTTTACT TGTAATTTTT TGGAGTGAAA 112380 ||| ||||| ||||||||| | ||||||| |||||| ||| |||| | ||| |||||||||| TAAGGCATTT GTTCTTCTTT CTCTCTTGTA GTATTTCACT TGTACTCTTT TGGAGTGAAA 64 TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AATAAAATTT TACCGAACCT 112440 |||||||||| |||||||||| |||||||||| |||||||||| || |||| || | |||||||| TAAATATTGG TTGGTTGTGT CCGAGGAGTA GGCAAAAGAA AACAAAAGTT TGCCGAACCT 124 CGTTAATTCT TGGTATTCCT TTTATTGTTG TCTTATTTAC TATTTATTAG CTACCTTTAG 112500 |||||||||| |||| ||| | | | |||||| ||| |||||| |||||||||| ||||||||| CGTTAATTCT TGGTGTTCTT TCTCTTGTTG TCTCATTTAC TATTTATTAG TTACCTTTAG 184 TTATAGTAGT TGTGATTC 112518 ||||||||| |||||||| ATATAGTAGT TGTGATTC 202 hqPGS_C01HBa0163B20.1+_SGN-E378308+ (112321 112518) ******************************************************************************** EST sequence 257 -strand 709 n (File: SGN-E353367-) 1 CTTAAAGTCA TTCTAAGATT CACTTAAGTC ACACAAAGAG AGACCGCCCA TATACCCTCT 61 CTAGGTGTGC CTAAACAATC CTTATGATTA CTTATAATGA GTCACAGACA CACTTCAAGA 121 CATCAAATAT ATCAATATAT AAACCCTATG ACATTTCCTC ATCAAAGGCT ATAAAAAGAC 181 TTACTTAAGT AGGTCAAGAA GATAACGTCC ATGATTGACC TCTTCAAGAC TACCTAAATA 241 ATCCTTATGA CTTCCTTCGT TCGGATCATG TCCACATAAT CAACATCTTT CCTAATTAGG 301 GTCATTCTTA AGACTCATTT AGGTAAGATA CGAAGTGACC ATTCCTATTC CCCCTTCACA 361 CCTTAACTAG ACAACCCTTA ACTACTCTAT ATAGGTACTT ATTCCTTTTA CATACTCCAT 421 AACATAAGTC ATTAGTTCAT TAAGACTCAT ACATCACATA AAGGACATTC AAATAATTGT 481 CTTGCACAAA ACCTAGGAAA TCCACATAAC ACCTTCAAAG TCTATTGTGC AATGTTTAGA 541 TAGCGTCCCA TACCACCTCC TAAACTTCAT AAACTCCTCT AATTCTAATA GGTTTTCCAT 601 ATGATGAGAA TAGGCAATAA CCGACATAGA CCATGATAAC AAGACATGGA ATCTGAAGTT 661 CTATCCTACT TTGATGAGGT CGTTTAACTT GCCAATGGTA GAACTTAGA Predicted gene structure (within gDNA segment 109884 to 117679): Exon 1 113225 113355 ( 131 n); cDNA 1 130 ( 130 n); score: 0.760 Intron 1 113356 113493 ( 138 n); Pd: 0.000 (s: 0.77), Pa: 0.000 (s: 0.72) Exon 2 113494 114020 ( 527 n); cDNA 131 638 ( 508 n); score: 0.809 MATCH C01HBa0163B20.1+ SGN-E353367- 0.799 658 0.928 C PGS_C01HBa0163B20.1+_SGN-E353367- (113225 113355,113494 114020) Alignment (genomic DNA sequence = upper lines): CTAAAAGCTA TCCTAAAACT CATTTAAGTA AGACAAAGAG AGATCGCTCA TACAACCTCT 113284 || |||| | | |||| | | || |||||| | |||||||| ||| ||| || || | ||||| CTTAAAGTCA TTCTAAGATT CACTTAAGTC ACACAAAGAG AGACCGCCCA TATACCCTCT 60 CTAGGCACAC CTAAATGATC TTTAAGACCA CCTATAATGA GATCA-ACAC ACACTTACAA 113343 ||||| | ||||| ||| ||| || | | |||||||| | ||| | || |||||| ||| CTAGGTGTGC CTAAACAATC CTTATGATTA CTTATAATGA G-TCACAGAC ACACTT-CAA 118 GACACCAAAC ATATGAACAT GAGATTCTTC TACCAAAGGT GATTCAAAGT CTCACTTGAG 113403 |||| |||| || GACATCAAAT AT........ .......... .......... .......... .......... 130 TGTATTGTGA AGCGACCGCC CATACAATCC CTTACACACA CTTAAGATAT CTTATAGACT 113463 .......... .......... .......... .......... .......... .......... 130 ACCTAAGATA GAATCCTTCT AACTTAATAC AACAACATAT AGATGATATG ACATTCTCCT 113523 | ||| |||| | | |||| ||||| |||| .......... .......... .......... ATCAATATAT AAACCCTATG ACATT-TCCT 159 TC-CAAAGGC TATCAAAATA CTTACTTAAG TAAATCAAGA AGATAACGTT CAT-ATTGAC 113581 ||||||| ||| |||| | |||||||||| || |||||| ||||||||| ||| |||||| CATCAAAGGC TATAAAAAGA CTTACTTAAG TAGGTCAAGA AGATAACGTC CATGATTGAC 219 CTATTCAAGA TTACCAAAAT AATCTTTAAG ACTACCTAAG GCTTAGATCA TGTCTACATA 113641 || ||||||| |||| |||| |||| ||| | ||| ||| | | ||||| |||| ||||| CTCTTCAAGA CTACCTAAAT AATCCTTATG ACTTCCT-TC GTTCGGATCA TGTCCACATA 278 ATCAACCATC TTCCCTAAGT AGAGTCATTC TTAGGACTTA TCTAGGTAAG ATACGAAGTG 113701 ||||| |||| || ||||| | || ||||||| ||| |||| | | |||||||| |||||||||| ATCAA-CATC TTTCCTAATT AGGGTCATTC TTAAGACTCA TTTAGGTAAG ATACGAAGTG 337 ACCATTCTTA TGCCCCCTTC ACACCTTAAC TAGACAACTA TTAACTACTA TAGATAAGTA 113761 ||||||| || | |||||||| |||||||||| |||||||| ||||||||| || ||| ||| ACCATTCCTA TTCCCCCTTC ACACCTTAAC TAGACAACCC TTAACTACTC TATATAGGTA 397 CTTATTCATT TAACATACTT TCTTAACTTA ATTCATTACA TTCATTTAAG ACTCATTCAT 113821 ||||||| || | |||||| | | |||| || | |||||| |||| ||||| |||||| ||| CTTATTCCTT TTACATAC-T CCATAACATA AGTCATTA-G TTCA-TTAAG ACTCATACAT 454 CACAT-AAGG ACATTCAAGT AATGGTCTTG GACAACACCT AGGGACTCTA ACTAACATCT 113880 ||||| |||| |||||||| | ||| |||||| |||| |||| | || || ||| CACATAAAGG ACATTCAAAT AATTGTCTTG CACAAAACCT A-GG------ ---AA-ATC- 502 TCAAAACTAA CATCTTCAAA GTCTATTGTG CAATGTCTAG ATAGTATCTC ATACCATCAC 113940 | | | ||| || ||||||| |||||||||| |||||| ||| |||| || | |||||| | | -C-ACA-TAA CACCTTCAAA GTCTATTGTG CAATGTTTAG ATAGCGTCCC ATACCACCTC 559 CTAAACTTCA TTGAACTTCT CTAATGCTAG TAGGTATCCC ATATGATAAG AATAAACAAT 114000 |||||||||| | |||| || ||||| ||| ||||| | || ||||||| || |||| |||| CTAAACTTCA -TAAACTCCT CTAATTCTAA TAGGTTTTCC ATATGATGAG AATAGGCAAT 618 AAACAACATA GAAAATGATA 114020 || | ||||| || |||||| AACCGACATA GACCATGATA 638 hqPGS_C01HBa0163B20.1+_SGN-E353367- (113225 113355,113494 114020) ******************************************************************************** EST sequence 33 -strand 858 n (File: SGN-E540411-) 1 TACATCAGTA TACGCGATTA ATCGCATGGT GAATACAGAA ACAAAGTTAG GGGATTTGTG 61 TTACCCTCTG GGGTCCAACT CATATTGGCA ACAATGTTAG TGCATCATGA TACTGAAATA 121 TGGGGAGATG ATGCAATGGA GTTTATGCCA GAGAGATTTA GTGAAGGAAT ATCAAAAGCA 181 ACAAAAGGAC AAGTTGTATT TTTTCCATTT AGTTGGGGTC CAAGAATATG TATTGGGCAA 241 AATTTTGCTA TGTTAGAGGC AAAAATGGCA ATGGTCATGA TTCTAAAACA TTATGCATTT 301 GAACTCTCTC CATCTTATGC TCATGCTCCT CACCCATTGT TGCTTCAACC TCAATATGGT 361 GCTCAATTGA TCATGCACAA GTTGTAGAAG TGGTTATCAC GTGTTGTCTT TTGAATCATG 421 TTATATCCTT TATTTATTGT TGGGATAATG TCCAAGTACC CCCTTAGCCT ATGTCCAAAA 481 TCTCAGAGAT ACACTTATAC CATACTAAGA TCTTATTACC CCCTGAACTT ATTTATTAAT 541 AATTTTTTAC CCCTTTTAGA CCTACGTGGC ACTATCTTGT GGGCCCAATG GTTGTTGACT 601 TTTTTTTTAA ACTAGTGCCA CGTAGGCTAA AAAGGGGTAG AAAATTACTT ATAAAATAAG 661 TTCAGGGGGG TAATAGGACC TTAGTATAGT ATAAGTGTGT CTCTGGAATT TCGGGCATAG 721 GTTGAGGGGG TACTTGTGCA TTATCCCTTT ATTGTTCTTT AATTATAGTT CAAGTGAAGT 781 CATATGTTGT TTTGTATAAG ACTGGAGAAT TTTATAATAA TAATATTAGT GTACTTTATG 841 TTTATGAGAA AAAAAAAA Predicted gene structure (within gDNA segment 127476 to 118416): Exon 1 126426 126382 ( 45 n); cDNA 359 403 ( 45 n); score: 0.600 Intron 1 126381 120581 (5801 n); Pd: 0.000 (s: 0.60), Pa: 0.000 (s: 0.62) Exon 2 120580 120206 ( 375 n); cDNA 404 777 ( 374 n); score: 0.785 PPA cDNA 847 858 MATCH C01HBa0163B20.1- SGN-E540411- 0.785 420 0.490 C PGS_C01HBa0163B20.1-_SGN-E540411- (126426 126382,120580 120206) Alignment (genomic DNA sequence = upper lines): GTGAACAAAT AAGCGTGGAA AAGTGTTAGA GAAGACTAGT ACGGGCCCTC TAACATTATT 126367 ||| ||| | | | || | |||| |||| | || ||| | GTGCTCAATT GATCATGCAC AAGTTGTAGA AGTGGTTATC ACGTG..... .......... 403 GTTCCCGGAC CATCCACCTT TTCCTTCCCC TTTGAGTGGC TCGGTGAGAT TAGATTTCTA 126307 .......... .......... .......... .......... .......... .......... 403 GAATGAAATG AGGTGATAAA AAGAAACGAT TGCTCACAGG AGATCCCTAT TCATGGAAGC 126247 .......... .......... .......... .......... .......... .......... 403 ACCGTGTAAT TAAGGTTAAG GGGAAAATCA AAGTGGGTTC CTAAACACAA ACTAAAGCTA 126187 .......... .......... .......... .......... .......... .......... 403 AGAGCTTCAG AAGCTTACCT TATTAGCATA TATCATATCA TATCAAATCA TAAAATATTA 126127 .......... .......... .......... .......... .......... .......... 403 TTATAAGTGG GAAGCTCCTA ACTTAAAAAT TGAATTACCA TTCTGCCCTT ATTTTATTTC 126067 .......... .......... .......... .......... .......... .......... 403 TAAACTAATA TAAATATTAA TATAAAATTA ATTTAATATT AAAGAATAAT TTTATTTAAA 126007 .......... .......... .......... .......... .......... .......... 403 TTCATGCATC TAGACACAAT GGTTCACATT CTTTGGTACA GTAAATTTTC TATCCCATCG 125947 .......... .......... .......... .......... .......... .......... 403 TTTCTCTCTC TCTCTCTCTC TCTCTCTATA TATATATATA TATATATTAC TGTATAACCT 125887 .......... .......... .......... .......... .......... .......... 403 TCACATTAAA TTAAAATATG ATTAAATATC TAATCATTTA AATGCTAAGT AATAGTTATA 125827 .......... .......... .......... .......... .......... .......... 403 ATATATTATA CTAAATAAAA AAAATAAGAA GTTATAAAGT CAAACATTGA AAGGTAGAAA 125767 .......... .......... .......... .......... .......... .......... 403 TATTTTTTAG AAAAGTGTTA GAAATCATTT CATAAAAGTT GTTAGGAATT ACTCTTTTTT 125707 .......... .......... .......... .......... .......... .......... 403 TAAATAAAAA CTTTTTATCT AATTCTTTTA TGAACGGTTA CGTTTAAATG GAAATTTGTT 125647 .......... .......... .......... .......... .......... .......... 403 AATTAGATAA AACATTTTTT TATATATAAA TATTTGATAA TTAAAGCATT TATCCTTTAT 125587 .......... .......... .......... .......... .......... .......... 403 TCTTTTTTCA TAATTGGTGT GGTTAAATGG ATTAAATTTG TTATCCTTTC TCTGTAATTA 125527 .......... .......... .......... .......... .......... .......... 403 GTATAATTAA ATGTATTGAA TTACTCCCCG TTCGGTATTG TTTGTCATGA TTTCTATTTT 125467 .......... .......... .......... .......... .......... .......... 403 TAGAGTCAAA CTATAAAAAC TTTTACTAAC ATTTTAAGAT GTATTTTTTC ATCATATTAA 125407 .......... .......... .......... .......... .......... .......... 403 TATGCAAAAA ATTGTAATTT ATAGTAATTT TCATATAGTT TTAGAGTATC TAAGTTTTTT 125347 .......... .......... .......... .......... .......... .......... 403 GTCAAATATC GAATTAATAT GATCTAATTT AACATTGAAA ATTAAGCAAA TTGGCTTTCG 125287 .......... .......... .......... .......... .......... .......... 403 AAAAGCGCAA CATGACGAAC AATTTCGGAC GGAGGAAGTA TTAGTAAAAA CAATCAACTT 125227 .......... .......... .......... .......... .......... .......... 403 TTCTCTCCCC GTGTCTAGGA TCATTAACTT CTGAAAATTA ACTTAAATAT CTCTTCACAT 125167 .......... .......... .......... .......... .......... .......... 403 TTTCATCTTA TCCTATAAAT CTTTAGCTAT ATATATGTAT CATGAAAAAT TAATTTTCCT 125107 .......... .......... .......... .......... .......... .......... 403 TTACTAATTG TCTTTTTTTT TATGTGAATC ACTAGGCAAT TTTCAGAAAC TTATTTTGTT 125047 .......... .......... .......... .......... .......... .......... 403 TTGAAATATT AATATTTGTT TGATCCTAGT TAGAATAATA TTTTGTATCA TAGTTTTATC 124987 .......... .......... .......... .......... .......... .......... 403 TTTAAAGTTT TAGATGGGGT TTTTTTCAAT TGTTTATAAA TATTTGAGTT TTTGTGGAAC 124927 .......... .......... .......... .......... .......... .......... 403 AATTATTATA CTCTTATTTT GTCATATATT TCCTGATTTG TGTGTTTACT TCTCTTTTTT 124867 .......... .......... .......... .......... .......... .......... 403 CTATGTATTT TTAATTTTTA ATTGATATGC TAAATTTCTT TTCAGGTCAT TGTCACATTA 124807 .......... .......... .......... .......... .......... .......... 403 ACCGTTTGGA TATATATATA TATATATAGA CACATACACA TGCACACTAA AATTGAGACA 124747 .......... .......... .......... .......... .......... .......... 403 GAAAAAGTTG AAAGTTGAAA GTATCAAATT ATCCTTTACG GGTTGAAAAG TCATTTAAGT 124687 .......... .......... .......... .......... .......... .......... 403 ATTTAATCCA AATATTTAAT AATTGGTATT TAAAAGTAAA TTTACCTATC TTTTAATAAT 124627 .......... .......... .......... .......... .......... .......... 403 ATTTCATTAA AACGAAACAA TAGAAAACAA ATACATTGTC ACTCATTAGT TCATTCAATT 124567 .......... .......... .......... .......... .......... .......... 403 CAATATGGTG GAATTGCTTT CATATTCCAC AATTATTCAA CCTTTAGAAT TACTTTTTTA 124507 .......... .......... .......... .......... .......... .......... 403 ATATTTTAGA TATGTATAAT TTTCGATGAT AAATATAAAC TTTAAACTAA CAGTATTTAG 124447 .......... .......... .......... .......... .......... .......... 403 GAAGTCCAAG TAACGGGCAT ATCTATGTGG TCAAGAAAAT CATTTAACTT TTTCTTGCTC 124387 .......... .......... .......... .......... .......... .......... 403 TTTATGAATT TTCAATTATT TTTAAATTTA TATGCTATTT ATCATTCATA AGTAGTGAAA 124327 .......... .......... .......... .......... .......... .......... 403 CACTTGAATC ATTATTAAGG CTTTTGAATT TTGATTGGTT AGGAGATAAG GTATCATCAA 124267 .......... .......... .......... .......... .......... .......... 403 GAACTCTACT CATGTATTTT TTATTATTAT ATATATTGTT ATAATTAAAA TCTTAAGAAG 124207 .......... .......... .......... .......... .......... .......... 403 GATATGAATG TTATATTTGT TCTTATCTGT TAACATTTTT TGTATTCTTT ATCGATTTAT 124147 .......... .......... .......... .......... .......... .......... 403 ACTTCTTTAA TTTAATCTTC TATGAAATTA TGAATGTTAT AAATCTATTT TTATTAGTGC 124087 .......... .......... .......... .......... .......... .......... 403 TGAAATTACT AATTTATGGC TTTTATATTC GTTTTTAAAT ATACTTTTAT ATTTTCTTTC 124027 .......... .......... .......... .......... .......... .......... 403 TTTTATCATT TTGTTACTTG TATGGTTTCT TAAGTAACTA CATATTTGTG TGCTTACTAA 123967 .......... .......... .......... .......... .......... .......... 403 ATGGAAGCGT AATGAGAGAT TATTAAGGAT AAGCCATATA GATATATTCA TATAATTAAA 123907 .......... .......... .......... .......... .......... .......... 403 AGCTAATAGT ATCTTAATTA GTTTTTCAAA TTTCTTGCTT GATGTTCAAT GCATTATTCG 123847 .......... .......... .......... .......... .......... .......... 403 ATTATTATGA ATTTTATATA ATGAATAAAA TATAAATAGA TAAAACTAAT ATTTTTAATT 123787 .......... .......... .......... .......... .......... .......... 403 TCAACATTTT CTATATAATA ATTGTATGGA ACAAACATGC AACGAACGTT TGCAAAAATT 123727 .......... .......... .......... .......... .......... .......... 403 AGTATATCAA AAAAGTAGAG TCTTTAATTC GAACCTAAAT AATAAGAAAA ACGAAACATA 123667 .......... .......... .......... .......... .......... .......... 403 GAACCGGGTA AGGAGAGGGA AAGCCAAAAC TTACTTCTTT TAGGGGGTTA ATTCCCTTTA 123607 .......... .......... .......... .......... .......... .......... 403 CACGTTAATT TAAAAAGATA ATTTAGATAT GTTTTATCTG GATTAAGATC AAAAACTTGT 123547 .......... .......... .......... .......... .......... .......... 403 CGTCATACTT ATGTTAGTTA TTATTGTTCA TTGAGTTAAA AAGATATGCC CACCTATTTT 123487 .......... .......... .......... .......... .......... .......... 403 GTATCCAATA CTTATTTTTT AAATTAGAGT AATTATAAAA AAAATTGTTA TATTATAAGG 123427 .......... .......... .......... .......... .......... .......... 403 ATAAATCAGT CCATATTGTT CCCTAGTTTG AAACAGACAG GAATTGAAAT GAACATTAAA 123367 .......... .......... .......... .......... .......... .......... 403 ATTATATTAA GCAAACCTTA AATGTAGGAC AAAACAAAAC AAAGTTAAAA AAATGGAAAC 123307 .......... .......... .......... .......... .......... .......... 403 ACTAACAACC TCCTCTTTTT CTTAGACCAT TTCATATCCT CACATATTTA ACAGAAACCA 123247 .......... .......... .......... .......... .......... .......... 403 ACACTATAAA TAGTTTCTCC ATTTTTTAGG AAATACATCT TTCAGAGCCA AGGGGCATGT 123187 .......... .......... .......... .......... .......... .......... 403 ACGGTCTCTA ATAAAAAATC CCCAAAAGCT CTCTATCGAT TTAACTATAC AAAAACATTT 123127 .......... .......... .......... .......... .......... .......... 403 TTTTTTTTAC TTTGGGAAAA ATACATAAAA GCATCAAAAT ATTATGGCTA AAAAATTAGT 123067 .......... .......... .......... .......... .......... .......... 403 CATTGGTGGC ATAGCCTCAA TTCTTGTGGT GGCTTGTGTT GTTGCAGCAT GTGTCACCAT 123007 .......... .......... .......... .......... .......... .......... 403 TACCAAAAAG AATGCGAGCG ATGGTGGTGA TGGAGCTAGC AATGGTGGCA TTTCAACCTC 122947 .......... .......... .......... .......... .......... .......... 403 TACAAAATCT GTTCAAGCAA TGTGTCAACC TACTGACTAC AAAGAAGCTT GTGAGAAGAG 122887 .......... .......... .......... .......... .......... .......... 403 TCTTGCATCA GCCAAGAACA CTAGTGACCC AAAGGAACTT ATAAAAGTTG CATTTGAATC 122827 .......... .......... .......... .......... .......... .......... 403 AACCATAACT GACATAAAAA ATGCCATAAA AAATACTGAC TTGATCAAGG ATGCAGCCAA 122767 .......... .......... .......... .......... .......... .......... 403 TGATCCTAGA ACAAAAGAGG CTCTAAATAC TTGTGACGGT CTTCTTGATG TGTCTATTGA 122707 .......... .......... .......... .......... .......... .......... 403 TGATCTCAGA AGATCGTTCG ATAAAGTTGG CACCTTTGAT ATTAACAAGA TCAAGGATTA 122647 .......... .......... .......... .......... .......... .......... 403 TACCGATGAT CTAAAAACAT GGATCAGTGC TTCGATTACT TATCAAGAAA CTTGCTTAGA 122587 .......... .......... .......... .......... .......... .......... 403 TGCTTTTCAA AACACAAGTG GTGACACTGG TGAAAAAATG AAGAAATTGT TAAAGACTGC 122527 .......... .......... .......... .......... .......... .......... 403 AGGGGAGCTT ACTAGCAATG GCCTTGCTAT GATTACTAGC TTTGGTGACA TGCTTACTAA 122467 .......... .......... .......... .......... .......... .......... 403 CATGAACATT CCTGGTATTA GCCGCCGATT ATTGGCAGAT GACTACACAT CATTCGTTGA 122407 .......... .......... .......... .......... .......... .......... 403 AGACGGTTCT CGTAGGCTTC TTCAAGTTTC AAATACCAAG CCTAATGCTG TGGTTGCTCT 122347 .......... .......... .......... .......... .......... .......... 403 AGATGGCAGC GGACAATTCA AGACCATCAA AGAAGCCCTC AAAGGTGTGC CCCCAAAGAA 122287 .......... .......... .......... .......... .......... .......... 403 CATTCAACCC TATGTCATCT TAATCAAGGC AGGTGAATAT AAGGAGATGG TCGATATCCC 122227 .......... .......... .......... .......... .......... .......... 403 AAGAGGGGTG ACAAACGTTG TGTTTATTGG CGAAGGCCCA ACCAAGACAA AGATTACTGG 122167 .......... .......... .......... .......... .......... .......... 403 CAACAAGAAC TATGCTGATG GCACTGCCAC TTTCCATACC TCCACCGTTG GTAAGTCAGA 122107 .......... .......... .......... .......... .......... .......... 403 TCATTCAATT AATGAGTTTA TGTGACGTCT AGCGCACACA AAAGTTAAAA TCTTTCTCTT 122047 .......... .......... .......... .......... .......... .......... 403 AAAATAATGT TAATGCAGCC GTGAATGGAG ATGGTTTCGT AGCAAAGGAT ATCGGGTTTG 121987 .......... .......... .......... .......... .......... .......... 403 AAAACACAGC TGGAGCAATG AAGCACCAAG CCGTTGCACT CCGTGTATCA GCAGACAAGA 121927 .......... .......... .......... .......... .......... .......... 403 CAGTTTTCTA CAACTGCAAC ATTGATGGAT ACCAAGACAC GCTATACACA CATTCCTACA 121867 .......... .......... .......... .......... .......... .......... 403 GACAATTCTA CAAAGATTGT TCCATCTCAG GAACCATTGA CTTCATCTTT GGCGATGCAT 121807 .......... .......... .......... .......... .......... .......... 403 CTGCCGTGTT CCAAAACTGT AAGATGATTG TAAGGAAACC AGGTGCAAAC CAAGCTTGTA 121747 .......... .......... .......... .......... .......... .......... 403 TGGTCACTGC CCAAGGAAGA AAAGACCATC GTGGGGTCGG TGCAATCATT TTGAGGAACT 121687 .......... .......... .......... .......... .......... .......... 403 GTGAAATCAG CGCTGAGCCA GCATTCATTA ACACCCAGCC ACCAATCAAA GCCTATCTTG 121627 .......... .......... .......... .......... .......... .......... 403 GACGACCATG GAAGGAGTAT TCCAGGACAA TTATAATGCA AAGTCAGATA GACGCGTTCA 121567 .......... .......... .......... .......... .......... .......... 403 TTGATCCTGA AGGATGGGCT CCATGGAATG GTAACTTTGC TCTAAACACT CTGTATTATG 121507 .......... .......... .......... .......... .......... .......... 403 CAGAGTATCA GAACAGGGGA CCAGGAGCAA ATACTGACAG AAGGGTTAAA TGGGCTGGTT 121447 .......... .......... .......... .......... .......... .......... 403 ATAAGAAAAG CATTTCACCA CAGGAAGCTG AAAAATATGC TCCTAATATC TTCATTGATC 121387 .......... .......... .......... .......... .......... .......... 403 AAGATAGCTG GATTAAGAAG ACTGGCATTT CCTATTGATG AATCTGTAAC AACTTTAATT 121327 .......... .......... .......... .......... .......... .......... 403 ATAAATCTTA TCTTCTACTG ATTAAAAAAT AAAAATAACT ATCCAACTTA TGTTTATTTA 121267 .......... .......... .......... .......... .......... .......... 403 GTTGCTTTTC TAGCTATGTC ATGTAATACT TAATTAGTTT TAGTTTATTC ATATTTTATG 121207 .......... .......... .......... .......... .......... .......... 403 TCTTAGCTTA TGCAAATTTC GACTTGGCTT TCAGCTTGTT TTATTCTTGT TTTCCCCTCT 121147 .......... .......... .......... .......... .......... .......... 403 AATTTGCATG ATATCAACCT AAATTCTACG TCATATAGAA TTACATTGTT AGCAAGTTCT 121087 .......... .......... .......... .......... .......... .......... 403 AGCACCACTG AATAAGTAAT TATAGAAGTT AGCATGACAA TTAGAGTAGC AAAAGTTGAG 121027 .......... .......... .......... .......... .......... .......... 403 TACTACACAT TTTTACTTGT CATGTGTCAT GACTCAATTC ATCAGGTCGT GTAGGAACCT 120967 .......... .......... .......... .......... .......... .......... 403 ACTTCAATAT ATAGATAGGA GAACCTAAGA CTGGCACCGG ACCAGAACGG GACCATCGGA 120907 .......... .......... .......... .......... .......... .......... 403 CCGGTTTATT GACCGATACC GGGATGAACC AGACCGGAAA TTCCGGGACA GATACTCGGT 120847 .......... .......... .......... .......... .......... .......... 403 TTCGTTCCGT TCCGTTCATT ATATGCCAGA ACGGATCGGG ATGGGATAAA CGGGATGACA 120787 .......... .......... .......... .......... .......... .......... 403 ACATCTAATT ATTCAAAAAA TGATTTTTCT GAATTACGAA AATATGAATA TTTTTTTATT 120727 .......... .......... .......... .......... .......... .......... 403 TTTCTATTTT TAAATTTATA ATGTAATTTT TTTACTTAAG CTTATTTTAA AGATATATTT 120667 .......... .......... .......... .......... .......... .......... 403 TTAAAATTTT TTTACTTATT AAGTTTGCAA ATTAAGTCTA TTTAAGTTTT CAAGATTTAA 120607 .......... .......... .......... .......... .......... .......... 403 ATCTTTCTAA GTTTATAAGT TATTACTATT ATTTATTATT ATGTTATAAT TTATAAGTTA 120547 | | ||| || ||||||| || | | ||| .......... .......... ......TTGT CTTTTGAATC ATGTTAT-AT CCTTTATTTA 436 TATTTAAGGA AAATGCACAA GTACCTGCTC AACCTATGTT TGAAATCTCA AAGACACACT 120487 | | | ||| |||| ||| ||||| || | ||||||| |||||||| ||| ||||| T-TGTTGGGA TAATGTCCAA GTACCCCCTT AGCCTATGTC CAAAATCTCA GAGATACACT 495 TATATTATAT TAAGGTCCTA TTACCCCCTA AACTTATTGT ATAACTATTT TTCTACCACT 120427 |||| ||| |||| || || ||||||||| |||||||| | || | || || || |||| || TATACCATAC TAAGATCTTA TTACCCCCTG AACTTATT-T ATTAATAATT TTTTACCCCT 554 TTTCGGCCTA CATGACACTA TCTTGTAGGC CCAACGTATG TTGACATTTT TCTTCAAGCT 120367 ||| | |||| | || ||||| |||||| ||| |||| | || ||||| |||| | || || || TTTAGACCTA CGTGGCACTA TCTTGTGGGC CCAATGGTTG TTGAC-TTTT TTTTTAAACT 613 AGTGTCACGT AGG-ACGAAA GGGATAGAAA ATTATTTATA GAATAAGTTC AGGGGGGTAA 120308 |||| ||||| ||| ||| ||| |||||| |||| ||||| ||||||||| |||||||||| AGTGCCACGT AGGCTAAAAA GGGGTAGAAA ATTACTTATA AAATAAGTTC AGGGGGGTAA 673 TAGGACCTGA GTATAGTATA AGTGTGTCTC TGAGATTCCG GGCATAGGTT GAGGGGGTAC 120248 |||||||| | |||||||||| |||||||||| || ||| || |||||||||| |||||||||| TAGGACCTTA GTATAGTATA AGTGTGTCTC TGGAATTTCG GGCATAGGTT GAGGGGGTAC 733 TTTTGCATTT TCCC-TTA-T ATTTATTACT TGTAGTTTAA ATGA 120206 || |||||| |||| ||| | || ||| | | ||||| || ||| TTGTGCATTA TCCCTTTATT GTTCTTTAAT TATAGTTCAA GTGA 777 hqPGS_C01HBa0163B20.1-_SGN-E540411- (120580 120206) ******************************************************************************** EST sequence 281 +strand 762 n (File: SGN-E546818+) 1 GCTGATGGCA CTGCCACTTT CCATACCTCC ACCGTTGCCG TGAATGGAGA TGGTTTCGTA 61 GCAAAGGATA TCGGGTTTGA AAACACAGCT GGAGCAATGA AGCACCAAGC CGTTGCACTC 121 CGTGTATCAG CAGACAAGAC AGTTTTCTAC AACTGCAACA TTGATGGATA CCAAGACACG 181 CTATACACAC ATTCCTACAG ACAATTCTAC AAAGATTGTT CCATCTCAGG AACCATTGAC 241 TTCATCTTTG GCGATGCATC TGCCGTGTTC CAAAACTGTA AGATGATTGT AAGGAAACCA 301 GGTGCAAACC AAGCTTGTAT GGTCACTGCC CAAGGAAGAA AAGACCATCG TGGGGTCGGT 361 GCAATCATTT TGAGGAACTG TGAAATCAGC GCTGAGCCAG CATTCATTAG CACCCAGCCA 421 CCAATCAAAG CCTATCTTGG ACGACCATGG AAGGAGTATT CCAGGACAAT TATGATGCAA 481 AGTCAGATAG ACACGTTCAT TGATCCTGAA GGATGGGCTC CATGGAATGG TAACTTTGCT 541 CTAAACACTC TGTATTATGC AGAGTATCAG AACAGGGGAC CAGGAGCAAA TACTGACTGA 601 AGGGTTAAAT GGGCTGGTTA TAAGAAAAGC ATTTCACCAC AAGAAGCTGA CAAATATGCT 661 CCTAATATCA TCATTGATCA AGATAGCTGG ATTAAGAAGA CTGGCATTTC CTAGTGATGA 721 ATCTGTAACA ACTTTCATTA TAAATCTTAT CTTCTACTGA TT Predicted gene structure (within gDNA segment 122753 to 120694): Exon 1 122153 122117 ( 37 n); cDNA 1 37 ( 37 n); score: 1.000 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 0), Pa: 0.981 (s: 1.00) Exon 2 122028 121304 ( 725 n); cDNA 38 762 ( 725 n); score: 0.988 MATCH C01HBa0163B20.1- SGN-E546818+ 0.988 762 1.000 C PGS_C01HBa0163B20.1-_SGN-E546818+ (122153 122117,122028 121304) Alignment (genomic DNA sequence = upper lines): GCTGATGGCA CTGCCACTTT CCATACCTCC ACCGTTGGTA AGTCAGATCA TTCAATTAAT 122094 |||||||||| |||||||||| |||||||||| ||||||| GCTGATGGCA CTGCCACTTT CCATACCTCC ACCGTTG... .......... .......... 37 GAGTTTATGT GACGTCTAGC GCACACAAAA GTTAAAATCT TTCTCTTAAA ATAATGTTAA 122034 .......... .......... .......... .......... .......... .......... 37 TGCAGCCGTG AATGGAGATG GTTTCGTAGC AAAGGATATC GGGTTTGAAA ACACAGCTGG 121974 ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .....CCGTG AATGGAGATG GTTTCGTAGC AAAGGATATC GGGTTTGAAA ACACAGCTGG 92 AGCAATGAAG CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTCTACAA 121914 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCAATGAAG CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTCTACAA 152 CTGCAACATT GATGGATACC AAGACACGCT ATACACACAT TCCTACAGAC AATTCTACAA 121854 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGCAACATT GATGGATACC AAGACACGCT ATACACACAT TCCTACAGAC AATTCTACAA 212 AGATTGTTCC ATCTCAGGAA CCATTGACTT CATCTTTGGC GATGCATCTG CCGTGTTCCA 121794 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATTGTTCC ATCTCAGGAA CCATTGACTT CATCTTTGGC GATGCATCTG CCGTGTTCCA 272 AAACTGTAAG ATGATTGTAA GGAAACCAGG TGCAAACCAA GCTTGTATGG TCACTGCCCA 121734 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACTGTAAG ATGATTGTAA GGAAACCAGG TGCAAACCAA GCTTGTATGG TCACTGCCCA 332 AGGAAGAAAA GACCATCGTG GGGTCGGTGC AATCATTTTG AGGAACTGTG AAATCAGCGC 121674 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAAGAAAA GACCATCGTG GGGTCGGTGC AATCATTTTG AGGAACTGTG AAATCAGCGC 392 TGAGCCAGCA TTCATTAACA CCCAGCCACC AATCAAAGCC TATCTTGGAC GACCATGGAA 121614 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| TGAGCCAGCA TTCATTAGCA CCCAGCCACC AATCAAAGCC TATCTTGGAC GACCATGGAA 452 GGAGTATTCC AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG 121554 |||||||||| |||||||||| | |||||||| |||||||||| ||||||||| |||||||||| GGAGTATTCC AGGACAATTA TGATGCAAAG TCAGATAGAC ACGTTCATTG ATCCTGAAGG 512 ATGGGCTCCA TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA 121494 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGGCTCCA TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA 572 CAGGGGACCA GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT 121434 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CAGGGGACCA GGAGCAAATA CTGACTGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT 632 TTCACCACAG GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT 121374 ||||||||| |||||||| | |||||||||| ||||||| || |||||||||| |||||||||| TTCACCACAA GAAGCTGACA AATATGCTCC TAATATCATC ATTGATCAAG ATAGCTGGAT 692 TAAGAAGACT GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT 121314 |||||||||| |||||||||| | |||||||| |||||||||| ||| |||||| |||||||||| TAAGAAGACT GGCATTTCCT AGTGATGAAT CTGTAACAAC TTTCATTATA AATCTTATCT 752 TCTACTGATT 121304 |||||||||| TCTACTGATT 762 hqPGS_C01HBa0163B20.1-_SGN-E546818+ (122153 122117,122028 121304) ******************************************************************************** EST sequence 270 +strand 762 n (File: SGN-E333346+) 1 GTTGCTCTAG ATGGCAGCGG ACAATTCAAG ACCATCAAAG AAGCCCTCAA AGGTGTGCCC 61 CCAAAGAACA TTCAACCCTA TGTCATCTTA ATCAAGGCAG GTGAATATAA GGAGATGGTC 121 GATATCCCAA GAGGGGTGAC AAACGTTGTG TTTATTGGCG AAGGCCCAAC CAAGACAAAG 181 ATTACTGGCA ACAAGAACTA TGCTGATGGC ACTGCCACTT TCCATACCTC CACCGTTGCC 241 GTGAATGGAG ATGGTTTCGT AGCAAAGGAT ATCGGGTTTG AAAACACAGC TGGAGCAATG 301 AAGCACCAAG CCGTTGCACT CCGTGTATCA GCAGACAAGA CAGTTTTCTA CAACTGCAAC 361 ATTGATGGAT ACCAAGACAC GCTATACACA CATTCCTACA GACAATTCTA CAAAGATTGT 421 TCCATCTCAG GAACCATTGA CTTCATCTTT GGCGATGCAT CTGCCGTGTT CCAAAACTGT 481 AAGATGATTG TAAGGAAACC AGGTGCAAAC CAAGCTTGTA TGGTCACTGC CCAAGGAAGA 541 AAAGACCATC NGTGGGGTCG GTGCAATCAT TTTGAGGAAC TGTGAAATCA GCGCTGAGCC 601 AGCATTCATT AACACCCAGC CACCAATCAA AGCCTATCTT GGACGACCAT GGAAGGAGTA 661 TTCCAGGACA ATTATAATGC AAAGTCAGAT AGACGCGTTC ATTGATCCTG AANGATGGGC 721 TCCATGGAAT GGTAACTTTG CTCTAAACAC TCTGTATTAT GC Predicted gene structure (within gDNA segment 122954 to 120896): Exon 1 122354 122117 ( 238 n); cDNA 1 238 ( 238 n); score: 1.000 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 1.00), Pa: 0.981 (s: 1.00) Exon 2 122028 121506 ( 523 n); cDNA 239 762 ( 524 n); score: 0.993 MATCH C01HBa0163B20.1- SGN-E333346+ 0.995 761 0.999 C PGS_C01HBa0163B20.1-_SGN-E333346+ (122354 122117,122028 121506) Alignment (genomic DNA sequence = upper lines): GTTGCTCTAG ATGGCAGCGG ACAATTCAAG ACCATCAAAG AAGCCCTCAA AGGTGTGCCC 122295 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTGCTCTAG ATGGCAGCGG ACAATTCAAG ACCATCAAAG AAGCCCTCAA AGGTGTGCCC 60 CCAAAGAACA TTCAACCCTA TGTCATCTTA ATCAAGGCAG GTGAATATAA GGAGATGGTC 122235 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAAAGAACA TTCAACCCTA TGTCATCTTA ATCAAGGCAG GTGAATATAA GGAGATGGTC 120 GATATCCCAA GAGGGGTGAC AAACGTTGTG TTTATTGGCG AAGGCCCAAC CAAGACAAAG 122175 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATATCCCAA GAGGGGTGAC AAACGTTGTG TTTATTGGCG AAGGCCCAAC CAAGACAAAG 180 ATTACTGGCA ACAAGAACTA TGCTGATGGC ACTGCCACTT TCCATACCTC CACCGTTGGT 122115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| ATTACTGGCA ACAAGAACTA TGCTGATGGC ACTGCCACTT TCCATACCTC CACCGTTG.. 238 AAGTCAGATC ATTCAATTAA TGAGTTTATG TGACGTCTAG CGCACACAAA AGTTAAAATC 122055 .......... .......... .......... .......... .......... .......... 238 TTTCTCTTAA AATAATGTTA ATGCAGCCGT GAATGGAGAT GGTTTCGTAG CAAAGGATAT 121995 |||| |||||||||| |||||||||| |||||||||| .......... .......... ......CCGT GAATGGAGAT GGTTTCGTAG CAAAGGATAT 272 CGGGTTTGAA AACACAGCTG GAGCAATGAA GCACCAAGCC GTTGCACTCC GTGTATCAGC 121935 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGGTTTGAA AACACAGCTG GAGCAATGAA GCACCAAGCC GTTGCACTCC GTGTATCAGC 332 AGACAAGACA GTTTTCTACA ACTGCAACAT TGATGGATAC CAAGACACGC TATACACACA 121875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACAAGACA GTTTTCTACA ACTGCAACAT TGATGGATAC CAAGACACGC TATACACACA 392 TTCCTACAGA CAATTCTACA AAGATTGTTC CATCTCAGGA ACCATTGACT TCATCTTTGG 121815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCTACAGA CAATTCTACA AAGATTGTTC CATCTCAGGA ACCATTGACT TCATCTTTGG 452 CGATGCATCT GCCGTGTTCC AAAACTGTAA GATGATTGTA AGGAAACCAG GTGCAAACCA 121755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGATGCATCT GCCGTGTTCC AAAACTGTAA GATGATTGTA AGGAAACCAG GTGCAAACCA 512 AGCTTGTATG GTCACTGCCC AAGGAAGAAA AGACCATC-G TGGGGTCGGT GCAATCATTT 121696 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGCTTGTATG GTCACTGCCC AAGGAAGAAA AGACCATCNG TGGGGTCGGT GCAATCATTT 572 TGAGGAACTG TGAAATCAGC GCTGAGCCAG CATTCATTAA CACCCAGCCA CCAATCAAAG 121636 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAGGAACTG TGAAATCAGC GCTGAGCCAG CATTCATTAA CACCCAGCCA CCAATCAAAG 632 CCTATCTTGG ACGACCATGG AAGGAGTATT CCAGGACAAT TATAATGCAA AGTCAGATAG 121576 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTATCTTGG ACGACCATGG AAGGAGTATT CCAGGACAAT TATAATGCAA AGTCAGATAG 692 ACGCGTTCAT TGATCCTGAA GGATGGGCTC CATGGAATGG TAACTTTGCT CTAAACACTC 121516 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| ACGCGTTCAT TGATCCTGAA NGATGGGCTC CATGGAATGG TAACTTTGCT CTAAACACTC 752 TGTATTATGC 121506 |||||||||| TGTATTATGC 762 hqPGS_C01HBa0163B20.1-_SGN-E333346+ (122354 122117,122028 121506) ******************************************************************************** EST sequence 269 +strand 608 n (File: SGN-E333283+) 1 AGATGGTCGA TATCCCAAGA GGGGTGACAA ACGTTGTGTT TATTGGCGAA GGCCCAACCA 61 AGACAAAGAT TACTGGCAAC AAGAACTATG CTGATGGCAC TGCCACTTTC CATACCTCCA 121 CCGTTGCCGT GAATGGAGAT GGTTTCGTAG CAAAGGATAT CGGGTTTGAA AACACAGCTG 181 GAGCAATGAA GCACCAAGCC GTTGCACTCC GTGTATCAGC AGACAAGACA GTTTTCTACA 241 ACTGCAACAT TGATGGATAC CAAGACACGC TATACACACA TTCCTACAGA CAATTCTACA 301 AAGATTGTTC CATCTCAGGA ACCATTGACT TCATCTTTGG CGATGCATCT GCCGTGTTCC 361 AAAACTGTAA GATGATTGTA AGGAAACCAG GTGCAAACCA AGCTTGTATG GTCACTGCCC 421 AAGGAAGAAA AGACCATCGT GGGGTCGGTG CAATCATTTT GAGGAACTGT GAAATCAGCG 481 CTGAGCCAGC ATTCATTAAC ACCCAGCCAC CAATCAAAGC CTATCTTGGA CGACCATGGA 541 AAGAGTATTC CAGGACAATT ATAAATGCAA AGTCAGATAG ACGCGTTCAT TGATCCTGAA 601 GGATGGGC Predicted gene structure (within gDNA segment 122842 to 120938): Exon 1 122242 122117 ( 126 n); cDNA 1 126 ( 126 n); score: 1.000 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 1.00), Pa: 0.981 (s: 1.00) Exon 2 122028 121548 ( 481 n); cDNA 127 608 ( 482 n); score: 0.993 MATCH C01HBa0163B20.1- SGN-E333283+ 0.994 607 0.998 C PGS_C01HBa0163B20.1-_SGN-E333283+ (122242 122117,122028 121548) Alignment (genomic DNA sequence = upper lines): AGATGGTCGA TATCCCAAGA GGGGTGACAA ACGTTGTGTT TATTGGCGAA GGCCCAACCA 122183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGGTCGA TATCCCAAGA GGGGTGACAA ACGTTGTGTT TATTGGCGAA GGCCCAACCA 60 AGACAAAGAT TACTGGCAAC AAGAACTATG CTGATGGCAC TGCCACTTTC CATACCTCCA 122123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACAAAGAT TACTGGCAAC AAGAACTATG CTGATGGCAC TGCCACTTTC CATACCTCCA 120 CCGTTGGTAA GTCAGATCAT TCAATTAATG AGTTTATGTG ACGTCTAGCG CACACAAAAG 122063 |||||| CCGTTG.... .......... .......... .......... .......... .......... 126 TTAAAATCTT TCTCTTAAAA TAATGTTAAT GCAGCCGTGA ATGGAGATGG TTTCGTAGCA 122003 |||||| |||||||||| |||||||||| .......... .......... .......... ....CCGTGA ATGGAGATGG TTTCGTAGCA 152 AAGGATATCG GGTTTGAAAA CACAGCTGGA GCAATGAAGC ACCAAGCCGT TGCACTCCGT 121943 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGATATCG GGTTTGAAAA CACAGCTGGA GCAATGAAGC ACCAAGCCGT TGCACTCCGT 212 GTATCAGCAG ACAAGACAGT TTTCTACAAC TGCAACATTG ATGGATACCA AGACACGCTA 121883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTATCAGCAG ACAAGACAGT TTTCTACAAC TGCAACATTG ATGGATACCA AGACACGCTA 272 TACACACATT CCTACAGACA ATTCTACAAA GATTGTTCCA TCTCAGGAAC CATTGACTTC 121823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACACATT CCTACAGACA ATTCTACAAA GATTGTTCCA TCTCAGGAAC CATTGACTTC 332 ATCTTTGGCG ATGCATCTGC CGTGTTCCAA AACTGTAAGA TGATTGTAAG GAAACCAGGT 121763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTGGCG ATGCATCTGC CGTGTTCCAA AACTGTAAGA TGATTGTAAG GAAACCAGGT 392 GCAAACCAAG CTTGTATGGT CACTGCCCAA GGAAGAAAAG ACCATCGTGG GGTCGGTGCA 121703 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAACCAAG CTTGTATGGT CACTGCCCAA GGAAGAAAAG ACCATCGTGG GGTCGGTGCA 452 ATCATTTTGA GGAACTGTGA AATCAGCGCT GAGCCAGCAT TCATTAACAC CCAGCCACCA 121643 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCATTTTGA GGAACTGTGA AATCAGCGCT GAGCCAGCAT TCATTAACAC CCAGCCACCA 512 ATCAAAGCCT ATCTTGGACG ACCATGGAAG GAGTATTCCA GGACAATTAT -AATGCAAAG 121584 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| ATCAAAGCCT ATCTTGGACG ACCATGGAAA GAGTATTCCA GGACAATTAT AAATGCAAAG 572 TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGC 121548 |||||||||| |||||||||| |||||||||| |||||| TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGC 608 hqPGS_C01HBa0163B20.1-_SGN-E333283+ (122242 122117,122028 121548) ******************************************************************************** EST sequence 239 +strand 610 n (File: SGN-E374401+) 1 ACACTGGTGA AAAAATGAAG AAATTGTTAA AGACTGCAGG GGAGCTTACT AGCAATGGCC 61 TTGCTATGAT TACTAGCTTT GGTGACATGC TTACTAACAT GAACATTCCT GGTATTAGCC 121 GCCGATTATT GGCAGATGAC TACACATCAT TCGTTGAAGA CGGTTCTCGT AGGCTTCTTC 181 AAGTTTCAAA TACCAAGCCT AATGCTGTGG TTGCTCTAGA TGGCAGCGGA CAATTCAAGA 241 CCATCAAAGA AGCCCTCAAA GGTGTGCCCC CAAAGAACAT TCAACCCTAT GTCATCTTAA 301 TCAAGGCAGG TGAATATAAG GAGATGGTCG ATATCCCAAG AGGGGTGACA AACGTTGTGT 361 TTATTGGCGA AGGCCCAACC AAGACAAAGA TTACTGGCAA CAAGAACTAT GCTGATGGCA 421 CTGCCACTTT CCATACCTCC ACCGTTGCCG TGAATGGAGA TGGTTTCGTA GCAAAGGATA 481 TCGGGTTTGA AAACACAGCT GGAGCAATGA AGCACCAAGC CGTTGCACTC CGTGTATCAG 541 CAGACAAGAC AGTTTTCTAC AACTGCAACA TTGATGGATA CCAAGACACG CTATACACAC 601 ATTCCTACAG Predicted gene structure (within gDNA segment 123163 to 121256): Exon 1 122563 122117 ( 447 n); cDNA 1 447 ( 447 n); score: 1.000 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 1.00), Pa: 0.981 (s: 1.00) Exon 2 122028 121866 ( 163 n); cDNA 448 610 ( 163 n); score: 1.000 MATCH C01HBa0163B20.1- SGN-E374401+ 1.000 610 1.000 C PGS_C01HBa0163B20.1-_SGN-E374401+ (122563 122117,122028 121866) Alignment (genomic DNA sequence = upper lines): ACACTGGTGA AAAAATGAAG AAATTGTTAA AGACTGCAGG GGAGCTTACT AGCAATGGCC 122504 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACTGGTGA AAAAATGAAG AAATTGTTAA AGACTGCAGG GGAGCTTACT AGCAATGGCC 60 TTGCTATGAT TACTAGCTTT GGTGACATGC TTACTAACAT GAACATTCCT GGTATTAGCC 122444 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGCTATGAT TACTAGCTTT GGTGACATGC TTACTAACAT GAACATTCCT GGTATTAGCC 120 GCCGATTATT GGCAGATGAC TACACATCAT TCGTTGAAGA CGGTTCTCGT AGGCTTCTTC 122384 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGATTATT GGCAGATGAC TACACATCAT TCGTTGAAGA CGGTTCTCGT AGGCTTCTTC 180 AAGTTTCAAA TACCAAGCCT AATGCTGTGG TTGCTCTAGA TGGCAGCGGA CAATTCAAGA 122324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTTTCAAA TACCAAGCCT AATGCTGTGG TTGCTCTAGA TGGCAGCGGA CAATTCAAGA 240 CCATCAAAGA AGCCCTCAAA GGTGTGCCCC CAAAGAACAT TCAACCCTAT GTCATCTTAA 122264 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCATCAAAGA AGCCCTCAAA GGTGTGCCCC CAAAGAACAT TCAACCCTAT GTCATCTTAA 300 TCAAGGCAGG TGAATATAAG GAGATGGTCG ATATCCCAAG AGGGGTGACA AACGTTGTGT 122204 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGCAGG TGAATATAAG GAGATGGTCG ATATCCCAAG AGGGGTGACA AACGTTGTGT 360 TTATTGGCGA AGGCCCAACC AAGACAAAGA TTACTGGCAA CAAGAACTAT GCTGATGGCA 122144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTATTGGCGA AGGCCCAACC AAGACAAAGA TTACTGGCAA CAAGAACTAT GCTGATGGCA 420 CTGCCACTTT CCATACCTCC ACCGTTGGTA AGTCAGATCA TTCAATTAAT GAGTTTATGT 122084 |||||||||| |||||||||| ||||||| CTGCCACTTT CCATACCTCC ACCGTTG... .......... .......... .......... 447 GACGTCTAGC GCACACAAAA GTTAAAATCT TTCTCTTAAA ATAATGTTAA TGCAGCCGTG 122024 ||||| .......... .......... .......... .......... .......... .....CCGTG 452 AATGGAGATG GTTTCGTAGC AAAGGATATC GGGTTTGAAA ACACAGCTGG AGCAATGAAG 121964 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGGAGATG GTTTCGTAGC AAAGGATATC GGGTTTGAAA ACACAGCTGG AGCAATGAAG 512 CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTCTACAA CTGCAACATT 121904 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTCTACAA CTGCAACATT 572 GATGGATACC AAGACACGCT ATACACACAT TCCTACAG 121866 |||||||||| |||||||||| |||||||||| |||||||| GATGGATACC AAGACACGCT ATACACACAT TCCTACAG 610 hqPGS_C01HBa0163B20.1-_SGN-E374401+ (122563 122117,122028 121866) ******************************************************************************** EST sequence 14 -strand 435 n (File: SGN-E239221-) 1 AGTATTCCAG GACAATTATA ATGCAAAGTC AGATAGACGC GTTCATTGAT CCTGAAGGAT 61 GGGCTCCATG GAATGGTAAC TTTGCTCTAA ACACTCTGTA TTATGCAGAG TATCAGAACA 121 GGGGACCAGG AGCAAATACT GACAGAAGGG TTAAATGGGC TGGTTATAAG AAAAGCATTT 181 CACCACAGGA AGCTGAAAAA TATGCTCCTA ATATCTTCAT TGATCAAGAT AGCTGGATTA 241 AGAAGACTGG CATTTCCTAT TGATGAATCT GTAACAACTT TAATTATAAA TCTTATCTTC 301 TACTGATTAA AAAATAAAAA TAACTATCCA ACTTATGTTT ATTTAGTTGC TTTTCTAGCT 361 ATGTCATGTA ATACTTAATT AGTTTTAGTT TATTCATATT TTATGTCTTA GCTTATGCAA 421 AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 122221 to 120451): Exon 1 121611 121192 ( 420 n); cDNA 1 420 ( 420 n); score: 1.000 PPA cDNA 421 435 MATCH C01HBa0163B20.1- SGN-E239221- 1.000 420 0.966 C PGS_C01HBa0163B20.1-_SGN-E239221- (121611 121192) Alignment (genomic DNA sequence = upper lines): AGTATTCCAG GACAATTATA ATGCAAAGTC AGATAGACGC GTTCATTGAT CCTGAAGGAT 121552 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTATTCCAG GACAATTATA ATGCAAAGTC AGATAGACGC GTTCATTGAT CCTGAAGGAT 60 GGGCTCCATG GAATGGTAAC TTTGCTCTAA ACACTCTGTA TTATGCAGAG TATCAGAACA 121492 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGCTCCATG GAATGGTAAC TTTGCTCTAA ACACTCTGTA TTATGCAGAG TATCAGAACA 120 GGGGACCAGG AGCAAATACT GACAGAAGGG TTAAATGGGC TGGTTATAAG AAAAGCATTT 121432 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGACCAGG AGCAAATACT GACAGAAGGG TTAAATGGGC TGGTTATAAG AAAAGCATTT 180 CACCACAGGA AGCTGAAAAA TATGCTCCTA ATATCTTCAT TGATCAAGAT AGCTGGATTA 121372 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCACAGGA AGCTGAAAAA TATGCTCCTA ATATCTTCAT TGATCAAGAT AGCTGGATTA 240 AGAAGACTGG CATTTCCTAT TGATGAATCT GTAACAACTT TAATTATAAA TCTTATCTTC 121312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGACTGG CATTTCCTAT TGATGAATCT GTAACAACTT TAATTATAAA TCTTATCTTC 300 TACTGATTAA AAAATAAAAA TAACTATCCA ACTTATGTTT ATTTAGTTGC TTTTCTAGCT 121252 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTGATTAA AAAATAAAAA TAACTATCCA ACTTATGTTT ATTTAGTTGC TTTTCTAGCT 360 ATGTCATGTA ATACTTAATT AGTTTTAGTT TATTCATATT TTATGTCTTA GCTTATGCAA 121192 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTCATGTA ATACTTAATT AGTTTTAGTT TATTCATATT TTATGTCTTA GCTTATGCAA 420 hqPGS_C01HBa0163B20.1-_SGN-E239221- (121611 121192) ******************************************************************************** EST sequence 15 -strand 380 n (File: SGN-E238742-) 1 AGGATGGGCT CCATGAAATG GTAACTTTGC TCTAAACACT CTGTATTATG CAGAGTATCA 61 GAACAGGGGC CCAGGAGCAA ATACTGACAG AAGGGTTAAA TGGGCTGGTT ATAAGAAAAG 121 CATTTCACCA CAGGAAGCTG AAAAATATGC TCCTAATATC TTCATTGATC AAGATAGCTG 181 GATTAAGAAG ACTGGCATTT CCTATTGATG AATCTGTAGC AACTTTAATT ATAAATCTTA 241 TCTTCTACTG ATTAAAAAAT AAAAATTACT ATCCAACATA TGTTTATTTA GTTGCTTTTC 301 TAGCTATGTC ATGTAATACT TAATTAGTTT TAGTTCCCTC ATATTTTATG TCTTAGCTTA 361 TGCAAAAAAA AAAAAAAAAA Predicted gene structure (within gDNA segment 122310 to 120451): Exon 1 121556 121192 ( 365 n); cDNA 1 365 ( 365 n); score: 0.978 PPA cDNA 366 380 MATCH C01HBa0163B20.1- SGN-E238742- 0.978 365 0.961 C PGS_C01HBa0163B20.1-_SGN-E238742- (121556 121192) Alignment (genomic DNA sequence = upper lines): AGGATGGGCT CCATGGAATG GTAACTTTGC TCTAAACACT CTGTATTATG CAGAGTATCA 121497 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| AGGATGGGCT CCATGAAATG GTAACTTTGC TCTAAACACT CTGTATTATG CAGAGTATCA 60 GAACAGGGGA CCAGGAGCAA ATACTGACAG AAGGGTTAAA TGGGCTGGTT ATAAGAAAAG 121437 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAACAGGGGC CCAGGAGCAA ATACTGACAG AAGGGTTAAA TGGGCTGGTT ATAAGAAAAG 120 CATTTCACCA CAGGAAGCTG AAAAATATGC TCCTAATATC TTCATTGATC AAGATAGCTG 121377 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATTTCACCA CAGGAAGCTG AAAAATATGC TCCTAATATC TTCATTGATC AAGATAGCTG 180 GATTAAGAAG ACTGGCATTT CCTATTGATG AATCTGTAAC AACTTTAATT ATAAATCTTA 121317 |||||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| GATTAAGAAG ACTGGCATTT CCTATTGATG AATCTGTAGC AACTTTAATT ATAAATCTTA 240 TCTTCTACTG ATTAAAAAAT AAAAATAACT ATCCAACTTA TGTTTATTTA GTTGCTTTTC 121257 |||||||||| |||||||||| |||||| ||| ||||||| || |||||||||| |||||||||| TCTTCTACTG ATTAAAAAAT AAAAATTACT ATCCAACATA TGTTTATTTA GTTGCTTTTC 300 TAGCTATGTC ATGTAATACT TAATTAGTTT TAGTTTATTC ATATTTTATG TCTTAGCTTA 121197 |||||||||| |||||||||| |||||||||| ||||| || |||||||||| |||||||||| TAGCTATGTC ATGTAATACT TAATTAGTTT TAGTTCCCTC ATATTTTATG TCTTAGCTTA 360 TGCAA 121192 ||||| TGCAA 365 hqPGS_C01HBa0163B20.1-_SGN-E238742- (121556 121192) ******************************************************************************** EST sequence 13 -strand 375 n (File: SGN-E239140-) 1 GGCTCCATGG AATGGTAACT TTGCTCTAAA CACTCNTGTA TTATGCAGAG TATCAGAACA 61 GGGGACCAGG AGCAAATACT GACAGAAGGG TTAAATGGGC TGGTTATAAG AAAAGCATTT 121 CACCACAGGA AGCTGAAAAA TATGCTCCTA ATATCTTCAT TGATCAAGAT AGCTGGATTA 181 AGAAGACTGG CATTTCCTAT TGATGAATCT GTAACAACTT TAATTATAAA TCTTATCTTC 241 TACTGATTAA AAAATAAAAA TAACTATCCA ACTTATGTTT ATTTAGTTGC TTTTCTAGCT 301 ATGTCATGTA ATACTTAATT AGTTTTAGTT TATTCATATT TTATGTCTTA GCTTATGCAA 361 AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 122160 to 120451): Exon 1 121550 121192 ( 359 n); cDNA 1 360 ( 360 n); score: 0.993 PPA cDNA 361 375 MATCH C01HBa0163B20.1- SGN-E239140- 0.993 359 0.957 C PGS_C01HBa0163B20.1-_SGN-E239140- (121550 121192) Alignment (genomic DNA sequence = upper lines): GGCTCCATGG AATGGTAACT TTGCTCTAAA CACTC-TGTA TTATGCAGAG TATCAGAACA 121492 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| GGCTCCATGG AATGGTAACT TTGCTCTAAA CACTCNTGTA TTATGCAGAG TATCAGAACA 60 GGGGACCAGG AGCAAATACT GACAGAAGGG TTAAATGGGC TGGTTATAAG AAAAGCATTT 121432 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGACCAGG AGCAAATACT GACAGAAGGG TTAAATGGGC TGGTTATAAG AAAAGCATTT 120 CACCACAGGA AGCTGAAAAA TATGCTCCTA ATATCTTCAT TGATCAAGAT AGCTGGATTA 121372 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCACAGGA AGCTGAAAAA TATGCTCCTA ATATCTTCAT TGATCAAGAT AGCTGGATTA 180 AGAAGACTGG CATTTCCTAT TGATGAATCT GTAACAACTT TAATTATAAA TCTTATCTTC 121312 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGAAGACTGG CATTTCCTAT TGATGAATCT GTAACAACTT TAATTATAAA TCTTATCTTC 240 TACTGATTAA AAAATAAAAA TAACTATCCA ACTTATGTTT ATTTAGTTGC TTTTCTAGCT 121252 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTGATTAA AAAATAAAAA TAACTATCCA ACTTATGTTT ATTTAGTTGC TTTTCTAGCT 300 ATGTCATGTA ATACTTAATT AGTTTTAGTT TATTCATATT TTATGTCTTA GCTTATGCAA 121192 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTCATGTA ATACTTAATT AGTTTTAGTT TATTCATATT TTATGTCTTA GCTTATGCAA 360 hqPGS_C01HBa0163B20.1-_SGN-E239140- (121550 121192) ******************************************************************************** EST sequence 181 -strand 323 n (File: SGN-E234823-) 1 AGGACAATTA TAATGCAAAG TCAGATAGCC GCGTTCATTG ATCCTAAAGG ATGGGCGCCA 61 TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAA AGTATCAGAA CAGGGGACCA 121 GGAGCAAATT CTGCCATAAG GGTTAAATGG GCTGGTTATA AAAAAAGCAT TTCACCACAG 181 CAAACTTAAA AATATGCCCC TAATATCTTC TTTGATCAAG ATAGCTGGAT TAAGAAGACT 241 GGCATTTCCC ATTGATGAAT GTGGAACACC TTTAAAAATA AATCGTATCT TCCCCTGGTT 301 ATCAAAAAAA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 122213 to 120015): Exon 1 121603 121281 ( 323 n); cDNA 1 323 ( 323 n); score: 0.901 MATCH C01HBa0163B20.1- SGN-E234823- 0.901 323 1.000 C PGS_C01HBa0163B20.1-_SGN-E234823- (121603 121281) Alignment (genomic DNA sequence = upper lines): AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGCTCCA 121544 |||||||||| |||||||||| |||||||| | |||||||||| ||||| |||| |||||| ||| AGGACAATTA TAATGCAAAG TCAGATAGCC GCGTTCATTG ATCCTAAAGG ATGGGCGCCA 60 TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA CAGGGGACCA 121484 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAA AGTATCAGAA CAGGGGACCA 120 GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAG 121424 ||||||||| ||| || ||| |||||||||| |||||||||| | |||||||| |||||||||| GGAGCAAATT CTGCCATAAG GGTTAAATGG GCTGGTTATA AAAAAAGCAT TTCACCACAG 180 GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT TAAGAAGACT 121364 || || ||| ||||||| || |||||||||| ||||||||| |||||||||| |||||||||| CAAACTTAAA AATATGCCCC TAATATCTTC TTTGATCAAG ATAGCTGGAT TAAGAAGACT 240 GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT TCTACTGATT 121304 ||||||||| |||||||||| || |||| | ||||| ||| |||| ||||| || ||| || GGCATTTCCC ATTGATGAAT GTGGAACACC TTTAAAAATA AATCGTATCT TCCCCTGGTT 300 AAAAAATAAA AATAACTATC CAA 121281 | ||| ||| || || | || ATCAAAAAAA AAAAAAAAAA AAA 323 hqPGS_C01HBa0163B20.1-_SGN-E234823- (121603 121281) ******************************************************************************** EST sequence 112 -strand 378 n (File: SGN-E394600-) 1 TTCATTAACA CCCAGCCAAC AATCAAAGCC TATCTTGGAC GACCATGGAA GGAGTATTCC 61 AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGCTCCA 121 TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA CAGGGGACCA 181 GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAG 241 GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT TAAGAAGACT 301 GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT TCTACTGATT 361 AAAAAATAAA AAAAAAAA Predicted gene structure (within gDNA segment 122273 to 120632): Exon 1 121663 121289 ( 375 n); cDNA 1 375 ( 375 n); score: 0.995 MATCH C01HBa0163B20.1- SGN-E394600- 0.995 375 0.992 C PGS_C01HBa0163B20.1-_SGN-E394600- (121663 121289) Alignment (genomic DNA sequence = upper lines): TTCATTAACA CCCAGCCACC AATCAAAGCC TATCTTGGAC GACCATGGAA GGAGTATTCC 121604 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| TTCATTAACA CCCAGCCAAC AATCAAAGCC TATCTTGGAC GACCATGGAA GGAGTATTCC 60 AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGCTCCA 121544 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACAATTA TAATGCAAAG TCAGATAGAC GCGTTCATTG ATCCTGAAGG ATGGGCTCCA 120 TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA CAGGGGACCA 121484 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAATGGTA ACTTTGCTCT AAACACTCTG TATTATGCAG AGTATCAGAA CAGGGGACCA 180 GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAG 121424 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGCAAATA CTGACAGAAG GGTTAAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAG 240 GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT TAAGAAGACT 121364 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGCTGAAA AATATGCTCC TAATATCTTC ATTGATCAAG ATAGCTGGAT TAAGAAGACT 300 GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT TCTACTGATT 121304 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCATTTCCT ATTGATGAAT CTGTAACAAC TTTAATTATA AATCTTATCT TCTACTGATT 360 AAAAAATAAA AATAA 121289 |||||||||| || || AAAAAATAAA AAAAA 375 hqPGS_C01HBa0163B20.1-_SGN-E394600- (121663 121289) ******************************************************************************** EST sequence 261 +strand 608 n (File: SGN-E332262+) 1 ACAAGATCAA GGATTATACC GATGATCTAA AAACATGGAT CAGTGCTTCG ATTACTTATC 61 AAGAAACTTG CTTAGATGCT TTTCAAAACA CAAGTGGTGA CACTGGTGAA AAAATGAAGA 121 AATTGTTAAA GACTGCAGGG GAGCTTACTA GCAATGGCCT TGCTATGATT ACTAGCTTTG 181 GTGACATGCT TACTAACATG AACATTCCTG GTATTAGCCG CCGATTATTG GCAGATGACT 241 ACACATCATT CGTTGAAGAC GGTTCTCGTA GGCTTCTTCA AGTTTCAAAT ACCAAGCCTA 301 ATGCTGTGGT TGCTCTAGAT GGCAGCGGAC AATTCAAGAC CATCAAAGAA GCCCTCAAAG 361 GTGTGCCCCC AAAGAACATT CAACCCTATG TCATCTTAAT CAAGGCAGGT GAATATAAGG 421 AGATGGTCGA TATCCCAAGA GGGGTGACAA ACGTTGTGTT TATTGGCGAA GGCCCAACCA 481 AGACAAAGAT TACTGGCAAC AAGAACTATG CTGATGGCAC TGCCACTTTC CATACCTCCA 541 CCGTTGCCGT GAATGGAGAT GGTTTCGTAG CAAAGGATAT CGGGTTTGAA AACACAGCTG 601 GAGCAATG Predicted gene structure (within gDNA segment 123262 to 121357): Exon 1 122662 122117 ( 546 n); cDNA 1 546 ( 546 n); score: 1.000 Intron 1 122116 122029 ( 88 n); Pd: 0.969 (s: 1.00), Pa: 0.981 (s: 1.00) Exon 2 122028 121967 ( 62 n); cDNA 547 608 ( 62 n); score: 1.000 MATCH C01HBa0163B20.1- SGN-E332262+ 1.000 608 1.000 C PGS_C01HBa0163B20.1-_SGN-E332262+ (122662 122117,122028 121967) Alignment (genomic DNA sequence = upper lines): ACAAGATCAA GGATTATACC GATGATCTAA AAACATGGAT CAGTGCTTCG ATTACTTATC 122603 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAGATCAA GGATTATACC GATGATCTAA AAACATGGAT CAGTGCTTCG ATTACTTATC 60 AAGAAACTTG CTTAGATGCT TTTCAAAACA CAAGTGGTGA CACTGGTGAA AAAATGAAGA 122543 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGAAACTTG CTTAGATGCT TTTCAAAACA CAAGTGGTGA CACTGGTGAA AAAATGAAGA 120 AATTGTTAAA GACTGCAGGG GAGCTTACTA GCAATGGCCT TGCTATGATT ACTAGCTTTG 122483 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATTGTTAAA GACTGCAGGG GAGCTTACTA GCAATGGCCT TGCTATGATT ACTAGCTTTG 180 GTGACATGCT TACTAACATG AACATTCCTG GTATTAGCCG CCGATTATTG GCAGATGACT 122423 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGACATGCT TACTAACATG AACATTCCTG GTATTAGCCG CCGATTATTG GCAGATGACT 240 ACACATCATT CGTTGAAGAC GGTTCTCGTA GGCTTCTTCA AGTTTCAAAT ACCAAGCCTA 122363 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACATCATT CGTTGAAGAC GGTTCTCGTA GGCTTCTTCA AGTTTCAAAT ACCAAGCCTA 300 ATGCTGTGGT TGCTCTAGAT GGCAGCGGAC AATTCAAGAC CATCAAAGAA GCCCTCAAAG 122303 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGCTGTGGT TGCTCTAGAT GGCAGCGGAC AATTCAAGAC CATCAAAGAA GCCCTCAAAG 360 GTGTGCCCCC AAAGAACATT CAACCCTATG TCATCTTAAT CAAGGCAGGT GAATATAAGG 122243 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGTGCCCCC AAAGAACATT CAACCCTATG TCATCTTAAT CAAGGCAGGT GAATATAAGG 420 AGATGGTCGA TATCCCAAGA GGGGTGACAA ACGTTGTGTT TATTGGCGAA GGCCCAACCA 122183 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATGGTCGA TATCCCAAGA GGGGTGACAA ACGTTGTGTT TATTGGCGAA GGCCCAACCA 480 AGACAAAGAT TACTGGCAAC AAGAACTATG CTGATGGCAC TGCCACTTTC CATACCTCCA 122123 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACAAAGAT TACTGGCAAC AAGAACTATG CTGATGGCAC TGCCACTTTC CATACCTCCA 540 CCGTTGGTAA GTCAGATCAT TCAATTAATG AGTTTATGTG ACGTCTAGCG CACACAAAAG 122063 |||||| CCGTTG.... .......... .......... .......... .......... .......... 546 TTAAAATCTT TCTCTTAAAA TAATGTTAAT GCAGCCGTGA ATGGAGATGG TTTCGTAGCA 122003 |||||| |||||||||| |||||||||| .......... .......... .......... ....CCGTGA ATGGAGATGG TTTCGTAGCA 572 AAGGATATCG GGTTTGAAAA CACAGCTGGA GCAATG 121967 |||||||||| |||||||||| |||||||||| |||||| AAGGATATCG GGTTTGAAAA CACAGCTGGA GCAATG 608 hqPGS_C01HBa0163B20.1-_SGN-E332262+ (122662 122117,122028 121967) ******************************************************************************** EST sequence 206 -strand 727 n (File: SGN-E546817-) 1 GATGGTTTCG TAGCAACGCA TATCGGGTTT GACAACACAG CTGGAGCAAT GAAGCACCAA 61 GCCGTTGCAC TCCGTGTATC AGCAGACAAG ACAGTTTTCT ACAACTGCAA CATTGATGGA 121 TACCAAGACA CGCTATACAC ACATTCCTAC AGACAATTCT ACAAAGATTG TTCCATCTCA 181 GGAACCATTG ATCTTCATCT TTGGCGATGC ATCTGCCGTG TTCCAAAACT GTAAGATGAT 241 TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT GCCCAAGGAA GAAAAGACCA 301 TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC AGCGCTGAGC CAGCATTCAT 361 TAGCACCCAG CCACCAATCA AAGCCTATCT TGGACCACCA TGGAAGGAGT ATTCCAGGAC 421 AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT GAAGGATGGG CTCCATGGAC 481 ATGGTAACTT TGCTCTAAAC ACTCTGTATT ATGCAGAGTA TCAGAACAGG GGACCAGGAG 541 CAAATACTGA CAGAAGGGTT AAATGGGCTG GTTATAAGAA AAGCATTTCA CCACAGGAAG 601 CTGAAAAATA TGCTCCTAAT ATCTTCATTG ATCAAGATAG CTGGATTAAG AAGACTGGCA 661 TTTCCTATTG ATGAATCTGT AACAACTTTA ATTATAAATC TTATCTTCTA CTGATTAAAA 721 AAAAAAA Predicted gene structure (within gDNA segment 122627 to 120648): Exon 1 122017 121293 ( 725 n); cDNA 1 727 ( 727 n); score: 0.985 MATCH C01HBa0163B20.1- SGN-E546817- 0.985 725 0.997 C PGS_C01HBa0163B20.1-_SGN-E546817- (122017 121293) Alignment (genomic DNA sequence = upper lines): GATGGTTTCG TAGCAAAGGA TATCGGGTTT GAAAACACAG CTGGAGCAAT GAAGCACCAA 121958 |||||||||| |||||| | | |||||||||| || ||||||| |||||||||| |||||||||| GATGGTTTCG TAGCAACGCA TATCGGGTTT GACAACACAG CTGGAGCAAT GAAGCACCAA 60 GCCGTTGCAC TCCGTGTATC AGCAGACAAG ACAGTTTTCT ACAACTGCAA CATTGATGGA 121898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCGTTGCAC TCCGTGTATC AGCAGACAAG ACAGTTTTCT ACAACTGCAA CATTGATGGA 120 TACCAAGACA CGCTATACAC ACATTCCTAC AGACAATTCT ACAAAGATTG TTCCATCTCA 121838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACCAAGACA CGCTATACAC ACATTCCTAC AGACAATTCT ACAAAGATTG TTCCATCTCA 180 GGAACCATTG A-CTTCATCT TTGGCGATGC ATCTGCCGTG TTCCAAAACT GTAAGATGAT 121779 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACCATTG ATCTTCATCT TTGGCGATGC ATCTGCCGTG TTCCAAAACT GTAAGATGAT 240 TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT GCCCAAGGAA GAAAAGACCA 121719 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT GCCCAAGGAA GAAAAGACCA 300 TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC AGCGCTGAGC CAGCATTCAT 121659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC AGCGCTGAGC CAGCATTCAT 360 TAACACCCAG CCACCAATCA AAGCCTATCT TGGACGACCA TGGAAGGAGT ATTCCAGGAC 121599 || ||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| TAGCACCCAG CCACCAATCA AAGCCTATCT TGGACCACCA TGGAAGGAGT ATTCCAGGAC 420 AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT GAAGGATGGG CTCCATGGA- 121540 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT GAAGGATGGG CTCCATGGAC 480 ATGGTAACTT TGCTCTAAAC ACTCTGTATT ATGCAGAGTA TCAGAACAGG GGACCAGGAG 121480 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGTAACTT TGCTCTAAAC ACTCTGTATT ATGCAGAGTA TCAGAACAGG GGACCAGGAG 540 CAAATACTGA CAGAAGGGTT AAATGGGCTG GTTATAAGAA AAGCATTTCA CCACAGGAAG 121420 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAATACTGA CAGAAGGGTT AAATGGGCTG GTTATAAGAA AAGCATTTCA CCACAGGAAG 600 CTGAAAAATA TGCTCCTAAT ATCTTCATTG ATCAAGATAG CTGGATTAAG AAGACTGGCA 121360 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGAAAAATA TGCTCCTAAT ATCTTCATTG ATCAAGATAG CTGGATTAAG AAGACTGGCA 660 TTTCCTATTG ATGAATCTGT AACAACTTTA ATTATAAATC TTATCTTCTA CTGATTAAAA 121300 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCCTATTG ATGAATCTGT AACAACTTTA ATTATAAATC TTATCTTCTA CTGATTAAAA 720 AATAAAA 121293 || |||| AAAAAAA 727 hqPGS_C01HBa0163B20.1-_SGN-E546817- (122017 121293) ******************************************************************************** EST sequence 200 -strand 715 n (File: SGN-E546778-) 1 AGGATATGGG GTTGAAAACA CAGCTGGAGC AATGAAGCAC CAAGCCCGTT GCACTCCGTG 61 TATCAGCAGA CAAGACAGTT TTCTACAGCT GCAACATTGA TGGATACCAA GACACGCTAT 121 ACACACATTC CTACAGACAA TTCTACAAAG ATTGTTCCAT CTCAGGAACC ATTGACTTCA 181 TCTTTGGCGA TGCATCTGCC GTGTTCCAAA ACTGTAAGAT GATTGTAAGG AAACCAGGTG 241 CAAACCAAGC TTGTATGGTC ACTGCCCAAG GAAGAAAAGA CCATCGTGGG GTCGGTGCAA 301 TCATTTTGAG GAACTGTGAA ATCAGCGCTG AGCCAGCATT CATTAGCACC CAGCCACCAA 361 TCAAAGCCTA TCTTGGACGA CCATGGAAGG AGTATTCCAG GACAATTATA ATGCAAAGTC 421 AGATAGACGC GTTCATTGAT CCTGAAGGAT GGGCTCCATG GAATGGTAAC TTTGCTCTAA 481 ACACTCTGTA TTATGCAGAG TATCAGAACA GGGGACCAGG AGCTAACATT GTCAGAAGGG 541 CCCATTGGTC TGCTTATCAG ATAAAACATT TCTCCTCAGG AAGTTGAAGA AGAATGCTCG 601 AGCATCCTTT CGTTGAGCCA AAAAAAGAAG GTGAAGGAAG CTTTGGCTCT TCCTGTGGAT 661 GAATCCGAAT CAACTTTAAA TAAAAATAAA GTCTAATTCA GATTAAAAAA AAAAA Predicted gene structure (within gDNA segment 122709 to 118959): Exon 1 122001 121293 ( 709 n); cDNA 1 715 ( 715 n); score: 0.895 MATCH C01HBa0163B20.1- SGN-E546778- 0.895 709 0.992 C PGS_C01HBa0163B20.1-_SGN-E546778- (122001 121293) Alignment (genomic DNA sequence = upper lines): AGGATATCGG GTTTGAAAAC ACAGCTGGAG CAATGAAGCA CCAAG-CCGT TGCACTCCGT 121943 ||||||| || | |||||||| |||||||||| |||||||||| ||||| |||| |||||||||| AGGATAT-GG GGTTGAAAAC ACAGCTGGAG CAATGAAGCA CCAAGCCCGT TGCACTCCGT 59 GTATCAGCAG ACAAGACAGT TTTCTACAAC TGCAACATTG ATGGATACCA AGACACGCTA 121883 |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| GTATCAGCAG ACAAGACAGT TTTCTACAGC TGCAACATTG ATGGATACCA AGACACGCTA 119 TACACACATT CCTACAGACA ATTCTACAAA GATTGTTCCA TCTCAGGAAC CATTGACTTC 121823 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACACACATT CCTACAGACA ATTCTACAAA GATTGTTCCA TCTCAGGAAC CATTGACTTC 179 ATCTTTGGCG ATGCATCTGC CGTGTTCCAA AACTGTAAGA TGATTGTAAG GAAACCAGGT 121763 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTGGCG ATGCATCTGC CGTGTTCCAA AACTGTAAGA TGATTGTAAG GAAACCAGGT 239 GCAAACCAAG CTTGTATGGT CACTGCCCAA GGAAGAAAAG ACCATCGTGG GGTCGGTGCA 121703 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAAACCAAG CTTGTATGGT CACTGCCCAA GGAAGAAAAG ACCATCGTGG GGTCGGTGCA 299 ATCATTTTGA GGAACTGTGA AATCAGCGCT GAGCCAGCAT TCATTAACAC CCAGCCACCA 121643 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ATCATTTTGA GGAACTGTGA AATCAGCGCT GAGCCAGCAT TCATTAGCAC CCAGCCACCA 359 ATCAAAGCCT ATCTTGGACG ACCATGGAAG GAGTATTCCA GGACAATTAT AATGCAAAGT 121583 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCAAAGCCT ATCTTGGACG ACCATGGAAG GAGTATTCCA GGACAATTAT AATGCAAAGT 419 CAGATAGACG CGTTCATTGA TCCTGAAGGA TGGGCTCCAT GGAATGGTAA CTTTGCTCTA 121523 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGATAGACG CGTTCATTGA TCCTGAAGGA TGGGCTCCAT GGAATGGTAA CTTTGCTCTA 479 AACACTCTGT ATTATGCAGA GTATCAGAAC AGGGGACCAG GAGCAAATAC TGACAGAAGG 121463 |||||||||| |||||||||| |||||||||| |||||||||| |||| || | || ||||||| AACACTCTGT ATTATGCAGA GTATCAGAAC AGGGGACCAG GAGCTAACAT TGTCAGAAGG 539 GTTAAATGGG CTGGTTATAA GA-AAAGCAT TTCACCACAG GAAGCTGAA- AAATATGCTC 121405 | | ||| ||| |||| | || ||| ||| ||| || ||| |||| |||| || |||||| GCCCATTGGT CTGCTTATCA GATAAAACAT TTCTCCTCAG GAAGTTGAAG AAGAATGCTC 599 -CTAATATCT TCATTGA-TC -AAGATAGCT GGATTAAGAA G-ACTGGCAT TTCCTATTGA 121349 || | || |||| | || | || || | ||| | |||| ||||| | || GAGCATCCTT TCGTTGAGCC AAAAAAAGAA GGTGAAGGAA GCTTTGGCTC TTCCTGTGGA 659 TGAATCTGTA ACAACTTTAA TTATAAATCT TATCTTCTAC TGATTAAAAA ATAAAA 121293 |||||| | | ||||||||| || |||| ||| | | ||||||||| | |||| TGAATCCGAA TCAACTTTAA ATAAAAATAA AGTCTAATTC AGATTAAAAA AAAAAA 715 hqPGS_C01HBa0163B20.1-_SGN-E546778- (122001 121293) ******************************************************************************** EST sequence 45 -strand 671 n (File: SGN-E374400-) 1 CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTTCTACA ACTGCAACAT 61 TGATGGATAC CAAGACACGC TATACACACA TTCCTACAGA CAATTCTACA AAGATTGTTC 121 CATCTCAGGA ACCATTGACT TCATCTTTGG CGATGCATCT GCCGTGTTCC AAAACTGTAA 181 GATGATTGTA AGGAAACCAG GTGCAAACCA AGCTTGTATG GTCACTGCCC AAGGAAGAAA 241 AGACCATCGT GGGGTCGGTG CAATCATTTT GAGGAACTGT GAAATCAGCG CTGAGCCAGC 301 ATTCATTAGC ACCCAGCCAC CAATCAAAGC CTATCTTGGA CGACCATGGA AGGAGTATTC 361 CAGGACAATT ATAATGCAAA GTCAGATAGA CGCGTTCATT GATCCTGAAG GATGGGCTCC 421 ATGGAATGGT AACTTTGCTC TAAACACTCT GTATTATGCA GAGTATCAGA ACAGGGGACC 481 AGGAGCAAAT ACTGACAGAA GGGTTAAATG GGCTGGTTAT AAGAAAAGCA TTTCACCACA 541 GGAAGCTGAA AAATATGCTC CTAATATCTT CATTGATCAA GATAGCTGGA TTAAGAAGAC 601 TGGCATTTCC TATTGATGAA TCTGTAACAA CTTTAATTAT AAATCTTATC TTCTACTGAT 661 TAAAAAAAAA A Predicted gene structure (within gDNA segment 122573 to 120658): Exon 1 121963 121294 ( 670 n); cDNA 1 671 ( 671 n); score: 0.993 MATCH C01HBa0163B20.1- SGN-E374400- 0.993 670 0.999 C PGS_C01HBa0163B20.1-_SGN-E374400- (121963 121294) Alignment (genomic DNA sequence = upper lines): CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG -TTTTCTACA ACTGCAACAT 121905 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CACCAAGCCG TTGCACTCCG TGTATCAGCA GACAAGACAG TTTTTCTACA ACTGCAACAT 60 TGATGGATAC CAAGACACGC TATACACACA TTCCTACAGA CAATTCTACA AAGATTGTTC 121845 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGATAC CAAGACACGC TATACACACA TTCCTACAGA CAATTCTACA AAGATTGTTC 120 CATCTCAGGA ACCATTGACT TCATCTTTGG CGATGCATCT GCCGTGTTCC AAAACTGTAA 121785 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCTCAGGA ACCATTGACT TCATCTTTGG CGATGCATCT GCCGTGTTCC AAAACTGTAA 180 GATGATTGTA AGGAAACCAG GTGCAAACCA AGCTTGTATG GTCACTGCCC AAGGAAGAAA 121725 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGATTGTA AGGAAACCAG GTGCAAACCA AGCTTGTATG GTCACTGCCC AAGGAAGAAA 240 AGACCATCGT GGGGTCGGTG CAATCATTTT GAGGAACTGT GAAATCAGCG CTGAGCCAGC 121665 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGACCATCGT GGGGTCGGTG CAATCATTTT GAGGAACTGT GAAATCAGCG CTGAGCCAGC 300 ATTCATTAAC ACCCAGCCAC CAATCAAAGC CTATCTTGGA CGACCATGGA AGGAGTATTC 121605 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTCATTAGC ACCCAGCCAC CAATCAAAGC CTATCTTGGA CGACCATGGA AGGAGTATTC 360 CAGGACAATT ATAATGCAAA GTCAGATAGA CGCGTTCATT GATCCTGAAG GATGGGCTCC 121545 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGGACAATT ATAATGCAAA GTCAGATAGA CGCGTTCATT GATCCTGAAG GATGGGCTCC 420 ATGGAATGGT AACTTTGCTC TAAACACTCT GTATTATGCA GAGTATCAGA ACAGGGGACC 121485 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGAATGGT AACTTTGCTC TAAACACTCT GTATTATGCA GAGTATCAGA ACAGGGGACC 480 AGGAGCAAAT ACTGACAGAA GGGTTAAATG GGCTGGTTAT AAGAAAAGCA TTTCACCACA 121425 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAGCAAAT ACTGACAGAA GGGTTAAATG GGCTGGTTAT AAGAAAAGCA TTTCACCACA 540 GGAAGCTGAA AAATATGCTC CTAATATCTT CATTGATCAA GATAGCTGGA TTAAGAAGAC 121365 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAAGCTGAA AAATATGCTC CTAATATCTT CATTGATCAA GATAGCTGGA TTAAGAAGAC 600 TGGCATTTCC TATTGATGAA TCTGTAACAA CTTTAATTAT AAATCTTATC TTCTACTGAT 121305 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGCATTTCC TATTGATGAA TCTGTAACAA CTTTAATTAT AAATCTTATC TTCTACTGAT 660 TAAAAAATAA A 121294 ||||||| || | TAAAAAAAAA A 671 hqPGS_C01HBa0163B20.1-_SGN-E374400- (121963 121294) ******************************************************************************** EST sequence 280 +strand 767 n (File: SGN-E549427+) 1 TGATGGAAGT GTCACGTTCA ATTCCTCCAC AGGTTTTCCT TTTGTCCATG TGTTCGAAAC 61 GAAAGATGTC AAGATTGTCT TCTTTGTCTG GACAATGAAG CACCAAGCCG GTGCACTCCT 121 GTGTGTCAAC AAACAAGACT TCTTTCTACT CCTGCATCCT TTTTGGATAC CTAAACACAC 181 TATACACACA TTCCTACAGA CAATTCTACA AAGATTGTTC CATCTCAGGA ACCATTGACT 241 TCATCTTTGG CGATGCATCT GCCGTGTTCC AAAACTGTAA GATGATTGTA AGGAAACCAG 301 GTGCAAACCA AGCTTGTATG GTCACTGCCC AAGGAAGAAA AGACCATCGT GGGGTCGGTG 361 CAATCATTTT GAGGAACTGT GAAATCAGCG CTGAGCCAGC ATTCATTAGC ACCCAGCCAC 421 CAATCAAAGC CTATCTTGGA CGACCATGGA AGGAGTATTC CAGGACAATT ATAATGCAAA 481 GTCAGATAGA CGCGTTCATT GATCCTGAAG GATGGGCTCC ATGGAATGGT AACTTTGCTC 541 TAAACACTCT GTATTATGCA GAGTATCAGA ACAGGGGACC AGGAGCAAAT ACTGACAGAA 601 GGGTTAATGG GCTGGTTATA AGAAAAGCAT TTCACCACAN GAAGCTGAAA ATATGCTCCT 661 AATATCTTCA TTGATCAAGA TAGCTGGATT AAGAAGACTG GCATTTCCTA TTGATGAAAT 721 CTGTAACACT TTTAATAATA ATCTTATCTT CTACTGATTA AAAAAAA Predicted gene structure (within gDNA segment 124275 to 120245): Exon 1 121977 121298 ( 680 n); cDNA 88 765 ( 678 n); score: 0.956 MATCH C01HBa0163B20.1- SGN-E549427+ 0.956 680 0.887 C PGS_C01HBa0163B20.1-_SGN-E549427+ (121977 121298) Alignment (genomic DNA sequence = upper lines): CTGGAGCAAT GAAGCACCAA GCCGTTGCAC TCC-GTGTAT CAGCAGACAA GACAGTTTTC 121919 ||||| |||| |||||||||| |||| ||||| ||| |||| | || || |||| ||| |||| CTGGA-CAAT GAAGCACCAA GCCGGTGCAC TCCTGTGTGT CAACAAACAA GACTTCTTTC 146 TACAACTGCA ACATTGATGG ATACCAAGAC ACGCTATACA CACATTCCTA CAGACAATTC 121859 ||| ||||| | || ||| ||||| | || || ||||||| |||||||||| |||||||||| TACTCCTGCA TCCTTTTTGG ATACCTAAAC ACACTATACA CACATTCCTA CAGACAATTC 206 TACAAAGATT GTTCCATCTC AGGAACCATT GACTTCATCT TTGGCGATGC ATCTGCCGTG 121799 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACAAAGATT GTTCCATCTC AGGAACCATT GACTTCATCT TTGGCGATGC ATCTGCCGTG 266 TTCCAAAACT GTAAGATGAT TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT 121739 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCCAAAACT GTAAGATGAT TGTAAGGAAA CCAGGTGCAA ACCAAGCTTG TATGGTCACT 326 GCCCAAGGAA GAAAAGACCA TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC 121679 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCCAAGGAA GAAAAGACCA TCGTGGGGTC GGTGCAATCA TTTTGAGGAA CTGTGAAATC 386 AGCGCTGAGC CAGCATTCAT TAACACCCAG CCACCAATCA AAGCCTATCT TGGACGACCA 121619 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCGCTGAGC CAGCATTCAT TAGCACCCAG CCACCAATCA AAGCCTATCT TGGACGACCA 446 TGGAAGGAGT ATTCCAGGAC AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT 121559 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAAGGAGT ATTCCAGGAC AATTATAATG CAAAGTCAGA TAGACGCGTT CATTGATCCT 506 GAAGGATGGG CTCCATGGAA TGGTAACTTT GCTCTAAACA CTCTGTATTA TGCAGAGTAT 121499 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGGATGGG CTCCATGGAA TGGTAACTTT GCTCTAAACA CTCTGTATTA TGCAGAGTAT 566 CAGAACAGGG GACCAGGAGC AAATACTGAC AGAAGGGTTA AATGGGCTGG TTATAAGAAA 121439 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CAGAACAGGG GACCAGGAGC AAATACTGAC AGAAGGGTT- AATGGGCTGG TTATAAGAAA 625 AGCATTTCAC CACAGGAAGC TGAAAAATAT GCTCCTAATA TCTTCATTGA TCAAGATAGC 121379 |||||||||| |||| ||||| || ||||||| |||||||||| |||||||||| |||||||||| AGCATTTCAC CACANGAAGC TG-AAAATAT GCTCCTAATA TCTTCATTGA TCAAGATAGC 684 TGGATTAAGA AGACTGGCAT TTCCTATTGA TG-AATCTGT AACAACTTTA ATTATAAATC 121320 |||||||||| |||||||||| |||||||||| || ||||||| |||| |||| || || |||| TGGATTAAGA AGACTGGCAT TTCCTATTGA TGAAATCTGT AACACTTTTA ATAAT-AATC 743 TTATCTTCTA CTGATTAAAA AA 121298 |||||||||| |||||||||| || TTATCTTCTA CTGATTAAAA AA 765 hqPGS_C01HBa0163B20.1-_SGN-E549427+ (121977 121298) ******************************************************************************** EST sequence 210 +strand 567 n (File: SGN-E330596+) 1 AAAAATCCCC AAAAGCTCTC TATCGATTTA ACTATACAAA AACATGGTTT TTTTTACTTT 61 GGGAAAAATA CATAAAAGCA TCAAAATATT ATGGCTAAAA AATTAGACAT TGGTGGCATA 121 GCCTCAATTC TTGTGGTGGC TTGTGTTGTT GCATCATTTC AACCTCTACA AAATCTGATC 181 AAGCAATGTG TCAACCTACT GACTACAAAG AAGCTTGTGA GAAGAGTCTT GCATCAACCA 241 AGAACACTAG TGACCCAAAG GAACTTATAA AAGCTGCATT TGAATCAACC ATAACTGACA 301 TAAAAAATGC CATAAAAAAT ACTGACTTGA TCAAGGATGC AGCCACATGA TCCTAGAACA 361 AAAGAGGCTC TAAATACTTG TGACGGTCTT GTTGATGTGT CTATTGATGA TCTCAGAAGA 421 TCGTTCGATA AAGTTGGCAC CTTTGATATT AACAAGATCA AGGATTATAC CGATGATCTA 481 AAAACATGGA TCAGTGCTTC GATTACTTAT CAAGAAACTT GCTTAGATGC TTTTCAAAAC 541 ACAAGTGGTG ACACTGGTGA AAAAATG Predicted gene structure (within gDNA segment 123773 to 121937): Exon 1 123173 123017 ( 157 n); cDNA 1 157 ( 157 n); score: 0.975 Intron 1 123016 122956 ( 61 n); Pd: 0.000 (s: 0.98), Pa: 0.000 (s: 0.98) Exon 2 122955 122547 ( 409 n); cDNA 158 567 ( 410 n); score: 0.984 MATCH C01HBa0163B20.1- SGN-E330596+ 0.981 566 0.998 C PGS_C01HBa0163B20.1-_SGN-E330596+ (123173 123017,122955 122547) Alignment (genomic DNA sequence = upper lines): AAAAATCCCC AAAAGCTCTC TATCGATTTA ACTATACAAA AACATTTTTT TTTTTACTTT 123114 |||||||||| |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| AAAAATCCCC AAAAGCTCTC TATCGATTTA ACTATACAAA AACATGGTTT TTTTTACTTT 60 GGGAAAAATA CATAAAAGCA TCAAAATATT ATGGCTAAAA AATTAGTCAT TGGTGGCATA 123054 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GGGAAAAATA CATAAAAGCA TCAAAATATT ATGGCTAAAA AATTAGACAT TGGTGGCATA 120 GCCTCAATTC TTGTGGTGGC TTGTGTTGTT GCAGCATGTG TCACCATTAC CAAAAAGAAT 122994 |||||||||| |||||||||| |||||||||| ||| ||| GCCTCAATTC TTGTGGTGGC TTGTGTTGTT GCATCAT... .......... .......... 157 GCGAGCGATG GTGGTGATGG AGCTAGCAAT GGTGGCATTT CAACCTCTAC AAAATCTGTT 122934 || |||||||||| |||||||| | .......... .......... .......... ........TT CAACCTCTAC AAAATCTGAT 179 CAAGCAATGT GTCAACCTAC TGACTACAAA GAAGCTTGTG AGAAGAGTCT TGCATCAGCC 122874 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || CAAGCAATGT GTCAACCTAC TGACTACAAA GAAGCTTGTG AGAAGAGTCT TGCATCAACC 239 AAGAACACTA GTGACCCAAA GGAACTTATA AAAGTTGCAT TTGAATCAAC CATAACTGAC 122814 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| AAGAACACTA GTGACCCAAA GGAACTTATA AAAGCTGCAT TTGAATCAAC CATAACTGAC 299 ATAAAAAATG CCATAAAAAA TACTGACTTG ATCAAGGATG CAGCCA-ATG ATCCTAGAAC 122755 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| ATAAAAAATG CCATAAAAAA TACTGACTTG ATCAAGGATG CAGCCACATG ATCCTAGAAC 359 AAAAGAGGCT CTAAATACTT GTGACGGTCT TCTTGATGTG TCTATTGATG ATCTCAGAAG 122695 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| AAAAGAGGCT CTAAATACTT GTGACGGTCT TGTTGATGTG TCTATTGATG ATCTCAGAAG 419 ATCGTTCGAT AAAGTTGGCA CCTTTGATAT TAACAAGATC AAGGATTATA CCGATGATCT 122635 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCGTTCGAT AAAGTTGGCA CCTTTGATAT TAACAAGATC AAGGATTATA CCGATGATCT 479 AAAAACATGG ATCAGTGCTT CGATTACTTA TCAAGAAACT TGCTTAGATG CTTTTCAAAA 122575 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAACATGG ATCAGTGCTT CGATTACTTA TCAAGAAACT TGCTTAGATG CTTTTCAAAA 539 CACAAGTGGT GACACTGGTG AAAAAATG 122547 |||||||||| |||||||||| |||||||| CACAAGTGGT GACACTGGTG AAAAAATG 567 hqPGS_C01HBa0163B20.1-_SGN-E330596+ (123173 123017,122955 122547) ******************************************************************************** EST sequence 266 +strand 475 n (File: SGN-E394601+) 1 AAAAAATCCC CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT 61 TGGGAAAAAT ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT 121 AGCCTCAATT CTTGTGGTGG CTTGTGTTGT TGCAGCATTT CAACCTCTAC AAAATCTGTT 181 CAAGCAATGT GTCAACCTAC TGACTACAAA GAAGCTTGTG AGAAGAGTCT TGCATCAGCC 241 AAGAACACTA GTGACCCAAA GGAACTTATA AAAGTTGCAT TTGAATCAAC CATAACTGAC 301 ATAAAAAATG CCATAAAAAA TACTGACTTG ATCAAGGATG CAGCCAATGA TCCTAGAACA 361 AAAGAGGCTC TAAATACTTG TGACGGTCTT CTTGATGTGT CTATTGATGA TCTCACAAGA 421 TCGTTCGAAA AAGTTGGCAC CTTTGATATT AACTCACATC AAAGGAGTAT ACCGA Predicted gene structure (within gDNA segment 123774 to 121831): Exon 1 123174 123017 ( 158 n); cDNA 1 158 ( 158 n); score: 1.000 Intron 1 123016 122956 ( 61 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 2 122955 122641 ( 315 n); cDNA 159 475 ( 317 n); score: 0.968 MATCH C01HBa0163B20.1- SGN-E394601+ 0.979 473 0.996 C PGS_C01HBa0163B20.1-_SGN-E394601+ (123174 123017,122955 122641) Alignment (genomic DNA sequence = upper lines): AAAAAATCCC CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT 123115 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAATCCC CAAAAGCTCT CTATCGATTT AACTATACAA AAACATTTTT TTTTTTACTT 60 TGGGAAAAAT ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT 123055 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGGAAAAAT ACATAAAAGC ATCAAAATAT TATGGCTAAA AAATTAGTCA TTGGTGGCAT 120 AGCCTCAATT CTTGTGGTGG CTTGTGTTGT TGCAGCATGT GTCACCATTA CCAAAAAGAA 122995 |||||||||| |||||||||| |||||||||| |||||||| AGCCTCAATT CTTGTGGTGG CTTGTGTTGT TGCAGCAT.. .......... .......... 158 TGCGAGCGAT GGTGGTGATG GAGCTAGCAA TGGTGGCATT TCAACCTCTA CAAAATCTGT 122935 | |||||||||| |||||||||| .......... .......... .......... .........T TCAACCTCTA CAAAATCTGT 179 TCAAGCAATG TGTCAACCTA CTGACTACAA AGAAGCTTGT GAGAAGAGTC TTGCATCAGC 122875 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGCAATG TGTCAACCTA CTGACTACAA AGAAGCTTGT GAGAAGAGTC TTGCATCAGC 239 CAAGAACACT AGTGACCCAA AGGAACTTAT AAAAGTTGCA TTTGAATCAA CCATAACTGA 122815 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAGAACACT AGTGACCCAA AGGAACTTAT AAAAGTTGCA TTTGAATCAA CCATAACTGA 299 CATAAAAAAT GCCATAAAAA ATACTGACTT GATCAAGGAT GCAGCCAATG ATCCTAGAAC 122755 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATAAAAAAT GCCATAAAAA ATACTGACTT GATCAAGGAT GCAGCCAATG ATCCTAGAAC 359 AAAAGAGGCT CTAAATACTT GTGACGGTCT TCTTGATGTG TCTATTGATG ATCTCAGAAG 122695 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AAAAGAGGCT CTAAATACTT GTGACGGTCT TCTTGATGTG TCTATTGATG ATCTCACAAG 419 ATCGTTCGAT AAAGTTGGCA CCTTTGATAT TAAC-AAGAT C-AAGGATTA TACCGA 122641 ||||||||| |||||||||| |||||||||| |||| | || | ||||| || |||||| ATCGTTCGAA AAAGTTGGCA CCTTTGATAT TAACTCACAT CAAAGGAGTA TACCGA 475 hqPGS_C01HBa0163B20.1-_SGN-E394601+ (123174 123017,122955 122641) ******************************************************************************** EST sequence 215 +strand 617 n (File: SGN-E331396+) 1 AGCCAAGAAC ACTAGTGACC CAAAGGAACT TATAAAAGTT GCATTTGAAT CAACCATAAC 61 TGACATAAAA AATGCCATAA AAAATACTGA CTTGATCAAG GATGCAGCCA ATGATCCTAG 121 AACAAAAGAG GCTCTAAATA CTTGTGACGG TCTTCTTGAT GTGTCTATTG ATGATCTCAG 181 AAGATCGTTC GATAAAGTTG GCACCTTTGA TATTAACAAG ATCAAGGATT ATACCGATGA 241 TCTAAAAACA TGGATCAGTG CTTCGATTAC TTATCAAGAA ACTTGCTTAG ATGCTTTTCA 301 AAACACAAGT GGTGACACTG GTGAAAAAAT GAAGAAATTG TTAAAGACTG CAGGGGAGCT 361 TACTAGCAAT GGCCTTGCTA TGATTACTAG CTTTGGTGAC ATGCTTACTA ACATGAACAT 421 TCCTGGTATT AGCCGCCGAT TATTGGCAGA TGACTACACA TCATTCGTTG AAGACGGTTC 481 TCGTAGGCTT CTTCAAGTTT CAAATACCAA GCCTAATGCT GTGGTTGCTC TAGATGGCAG 541 CGGACAATTC AAGACCATCA AAGAAGCCCT CAAAGGTGTG CCCCCAAAGA ACATTCAACC 601 CTATGTCATC TTAATCA Predicted gene structure (within gDNA segment 123477 to 121651): Exon 1 122877 122261 ( 617 n); cDNA 1 617 ( 617 n); score: 1.000 MATCH C01HBa0163B20.1- SGN-E331396+ 1.000 617 1.000 C PGS_C01HBa0163B20.1-_SGN-E331396+ (122877 122261) Alignment (genomic DNA sequence = upper lines): AGCCAAGAAC ACTAGTGACC CAAAGGAACT TATAAAAGTT GCATTTGAAT CAACCATAAC 122818 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAAGAAC ACTAGTGACC CAAAGGAACT TATAAAAGTT GCATTTGAAT CAACCATAAC 60 TGACATAAAA AATGCCATAA AAAATACTGA CTTGATCAAG GATGCAGCCA ATGATCCTAG 122758 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGACATAAAA AATGCCATAA AAAATACTGA CTTGATCAAG GATGCAGCCA ATGATCCTAG 120 AACAAAAGAG GCTCTAAATA CTTGTGACGG TCTTCTTGAT GTGTCTATTG ATGATCTCAG 122698 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAAAAGAG GCTCTAAATA CTTGTGACGG TCTTCTTGAT GTGTCTATTG ATGATCTCAG 180 AAGATCGTTC GATAAAGTTG GCACCTTTGA TATTAACAAG ATCAAGGATT ATACCGATGA 122638 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGATCGTTC GATAAAGTTG GCACCTTTGA TATTAACAAG ATCAAGGATT ATACCGATGA 240 TCTAAAAACA TGGATCAGTG CTTCGATTAC TTATCAAGAA ACTTGCTTAG ATGCTTTTCA 122578 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTAAAAACA TGGATCAGTG CTTCGATTAC TTATCAAGAA ACTTGCTTAG ATGCTTTTCA 300 AAACACAAGT GGTGACACTG GTGAAAAAAT GAAGAAATTG TTAAAGACTG CAGGGGAGCT 122518 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAACACAAGT GGTGACACTG GTGAAAAAAT GAAGAAATTG TTAAAGACTG CAGGGGAGCT 360 TACTAGCAAT GGCCTTGCTA TGATTACTAG CTTTGGTGAC ATGCTTACTA ACATGAACAT 122458 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TACTAGCAAT GGCCTTGCTA TGATTACTAG CTTTGGTGAC ATGCTTACTA ACATGAACAT 420 TCCTGGTATT AGCCGCCGAT TATTGGCAGA TGACTACACA TCATTCGTTG AAGACGGTTC 122398 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCTGGTATT AGCCGCCGAT TATTGGCAGA TGACTACACA TCATTCGTTG AAGACGGTTC 480 TCGTAGGCTT CTTCAAGTTT CAAATACCAA GCCTAATGCT GTGGTTGCTC TAGATGGCAG 122338 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTAGGCTT CTTCAAGTTT CAAATACCAA GCCTAATGCT GTGGTTGCTC TAGATGGCAG 540 CGGACAATTC AAGACCATCA AAGAAGCCCT CAAAGGTGTG CCCCCAAAGA ACATTCAACC 122278 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGACAATTC AAGACCATCA AAGAAGCCCT CAAAGGTGTG CCCCCAAAGA ACATTCAACC 600 CTATGTCATC TTAATCA 122261 |||||||||| ||||||| CTATGTCATC TTAATCA 617 hqPGS_C01HBa0163B20.1-_SGN-E331396+ (122877 122261) ******************************************************************************** EST sequence 273 +strand 774 n (File: SGN-E333949+) 1 CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 61 TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGTTAA AAAATTAGTC 121 ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 181 ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 241 ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 301 CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 361 ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 421 GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 481 GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 541 ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 601 GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 661 GGGGAGCTTA CTAGCAATGG CCTTGCTATG ATTACTAGCT TTGGTGACAT GCTTACTAAC 721 ATGAACATTC CTGGTATTAG CCGCCGATTA TTGGCAGATG ACTACACATC ATTT Predicted gene structure (within gDNA segment 123785 to 121793): Exon 1 123185 122413 ( 773 n); cDNA 1 773 ( 773 n); score: 0.999 MATCH C01HBa0163B20.1- SGN-E333949+ 0.999 773 0.999 C PGS_C01HBa0163B20.1-_SGN-E333949+ (123185 122413) Alignment (genomic DNA sequence = upper lines): CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 123126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 60 TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 123066 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGTTAA AAAATTAGTC 120 ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 123006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 180 ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 122946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 240 ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 122886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 300 CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 122826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 360 ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 122766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 420 GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 122706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 480 GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 122646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 540 ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 122586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 600 GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 122526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 660 GGGGAGCTTA CTAGCAATGG CCTTGCTATG ATTACTAGCT TTGGTGACAT GCTTACTAAC 122466 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGAGCTTA CTAGCAATGG CCTTGCTATG ATTACTAGCT TTGGTGACAT GCTTACTAAC 720 ATGAACATTC CTGGTATTAG CCGCCGATTA TTGGCAGATG ACTACACATC ATT 122413 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| ATGAACATTC CTGGTATTAG CCGCCGATTA TTGGCAGATG ACTACACATC ATT 773 hqPGS_C01HBa0163B20.1-_SGN-E333949+ (123185 122413) ******************************************************************************** EST sequence 267 +strand 740 n (File: SGN-E333007+) 1 GCATGTACGG TCTCTAATAA AAAATCCCCA AAAGCTCTCT ATCGATTTAA CTATACAAAA 61 ACATTTTTTT TTTTACTTTG GGAAAAATAC ATAAAAGCAT CAAAATATTA TGGCTAAAAA 121 ATTAGTCATT GGTGGCATAG CCTCAATTCT TGTGGTGGCT TGTGTTGTTG CAGCATGTGT 181 CACCATTACC AAAAAGAATG CGAGCGATGG TGGTGATGGA GCTAGCAATG GTGGCATTTC 241 AACCTCTACA AAATCTGTTC AAGCAATGTG TCAACCTACT GACTACAAAG AAGCTTGTGA 301 GAAGAGTCTT GCATCAGCCA AGAACACTAG TGACCCAAAG GAACTTATAA AAGTTGCATT 361 TGAATCAACC ATAACTGACA TAAAAAATGC CATAAAAAAT ACTGACTTGA TCAAGGATGC 421 AGCCAATGAT CCTAGAACAA AAGAGGCTCT AAATACTTGT GACGGTCTTC TTGATGTGTC 481 TATTGATGAT CTCAGAAGAT CGTTCGATAA AGTTGGCACC TTTGATATTA ACAAGATCAA 541 GGATTATACC GATGATCTAA AAACATGGAT CAGTGCTTCG ATTACTTATC AAGAAACTTG 601 CTTAGATGCT TTTCAAAACA CAAGTGGTGA CACTGGTGAA AAAATGAAGA AATGTTAAAG 661 ACTGCAGGGG AGCTTACTAG CAATGGCCTT GCTATGATTA CTAGCTTTGG TGACATGCTT 721 ACTAACATGA ACATTCCTGG Predicted gene structure (within gDNA segment 123792 to 121842): Exon 1 123192 122452 ( 741 n); cDNA 1 740 ( 740 n); score: 0.999 MATCH C01HBa0163B20.1- SGN-E333007+ 0.999 741 1.001 C PGS_C01HBa0163B20.1-_SGN-E333007+ (123192 122452) Alignment (genomic DNA sequence = upper lines): GCATGTACGG TCTCTAATAA AAAATCCCCA AAAGCTCTCT ATCGATTTAA CTATACAAAA 123133 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCATGTACGG TCTCTAATAA AAAATCCCCA AAAGCTCTCT ATCGATTTAA CTATACAAAA 60 ACATTTTTTT TTTTACTTTG GGAAAAATAC ATAAAAGCAT CAAAATATTA TGGCTAAAAA 123073 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATTTTTTT TTTTACTTTG GGAAAAATAC ATAAAAGCAT CAAAATATTA TGGCTAAAAA 120 ATTAGTCATT GGTGGCATAG CCTCAATTCT TGTGGTGGCT TGTGTTGTTG CAGCATGTGT 123013 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGTCATT GGTGGCATAG CCTCAATTCT TGTGGTGGCT TGTGTTGTTG CAGCATGTGT 180 CACCATTACC AAAAAGAATG CGAGCGATGG TGGTGATGGA GCTAGCAATG GTGGCATTTC 122953 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACCATTACC AAAAAGAATG CGAGCGATGG TGGTGATGGA GCTAGCAATG GTGGCATTTC 240 AACCTCTACA AAATCTGTTC AAGCAATGTG TCAACCTACT GACTACAAAG AAGCTTGTGA 122893 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACCTCTACA AAATCTGTTC AAGCAATGTG TCAACCTACT GACTACAAAG AAGCTTGTGA 300 GAAGAGTCTT GCATCAGCCA AGAACACTAG TGACCCAAAG GAACTTATAA AAGTTGCATT 122833 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAGTCTT GCATCAGCCA AGAACACTAG TGACCCAAAG GAACTTATAA AAGTTGCATT 360 TGAATCAACC ATAACTGACA TAAAAAATGC CATAAAAAAT ACTGACTTGA TCAAGGATGC 122773 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAATCAACC ATAACTGACA TAAAAAATGC CATAAAAAAT ACTGACTTGA TCAAGGATGC 420 AGCCAATGAT CCTAGAACAA AAGAGGCTCT AAATACTTGT GACGGTCTTC TTGATGTGTC 122713 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCAATGAT CCTAGAACAA AAGAGGCTCT AAATACTTGT GACGGTCTTC TTGATGTGTC 480 TATTGATGAT CTCAGAAGAT CGTTCGATAA AGTTGGCACC TTTGATATTA ACAAGATCAA 122653 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATTGATGAT CTCAGAAGAT CGTTCGATAA AGTTGGCACC TTTGATATTA ACAAGATCAA 540 GGATTATACC GATGATCTAA AAACATGGAT CAGTGCTTCG ATTACTTATC AAGAAACTTG 122593 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATTATACC GATGATCTAA AAACATGGAT CAGTGCTTCG ATTACTTATC AAGAAACTTG 600 CTTAGATGCT TTTCAAAACA CAAGTGGTGA CACTGGTGAA AAAATGAAGA AATTGTTAAA 122533 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| CTTAGATGCT TTTCAAAACA CAAGTGGTGA CACTGGTGAA AAAATGAAGA AA-TGTTAAA 659 GACTGCAGGG GAGCTTACTA GCAATGGCCT TGCTATGATT ACTAGCTTTG GTGACATGCT 122473 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACTGCAGGG GAGCTTACTA GCAATGGCCT TGCTATGATT ACTAGCTTTG GTGACATGCT 719 TACTAACATG AACATTCCTG G 122452 |||||||||| |||||||||| | TACTAACATG AACATTCCTG G 740 hqPGS_C01HBa0163B20.1-_SGN-E333007+ (123192 122452) ******************************************************************************** EST sequence 264 +strand 733 n (File: SGN-E332743+) 1 CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 61 TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 121 ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 181 ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 241 ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 301 CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 361 ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 421 GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 481 GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 541 ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 601 GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 661 GGGGAGCTTA CTAGCAATGG CCTTGCTATG ATTACTAGCT TTGGTGACAT GCTTACTAAC 721 ATGAACATTC CTG Predicted gene structure (within gDNA segment 123785 to 121843): Exon 1 123185 122453 ( 733 n); cDNA 1 733 ( 733 n); score: 1.000 MATCH C01HBa0163B20.1- SGN-E332743+ 1.000 733 1.000 C PGS_C01HBa0163B20.1-_SGN-E332743+ (123185 122453) Alignment (genomic DNA sequence = upper lines): CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 123126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 60 TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 123066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 120 ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 123006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 180 ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 122946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 240 ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 122886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 300 CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 122826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 360 ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 122766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 420 GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 122706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 480 GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 122646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 540 ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 122586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 600 GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 122526 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 660 GGGGAGCTTA CTAGCAATGG CCTTGCTATG ATTACTAGCT TTGGTGACAT GCTTACTAAC 122466 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGAGCTTA CTAGCAATGG CCTTGCTATG ATTACTAGCT TTGGTGACAT GCTTACTAAC 720 ATGAACATTC CTG 122453 |||||||||| ||| ATGAACATTC CTG 733 hqPGS_C01HBa0163B20.1-_SGN-E332743+ (123185 122453) ******************************************************************************** EST sequence 260 +strand 724 n (File: SGN-E332444+) 1 ATAAAAAATC CCCAAAAGCT CTCTATCGAT TTAACTATAC AAAAACATTT TTTTTTTTAC 61 TTTGGGAAAA ATACATAAAA GCATCAAAAT ATTATGGCTA AAAAATTAGT CATTGGTGGC 121 ATAGCCTCAA TTCTTGTGGT GGCTTGTGTT GTTGCAGCAT GTGTCACCAT TACCAAAAAG 181 AATGCGAGCG ATGGTGGTGA TGGAGCTAGC AATGGTGGCA TTTCAACCTC TACAAAATCT 241 GTTCAAGCAA TGTGTCAACC TACTGACTAC AAAGAAGCTT GTGAGAAGAG TCTTGCATCA 301 GCCAAGAACA CTAGTGACCC AAAGGAACTT ATAAAAGTTG CATTTGAATC AACCATAACT 361 GACATAAAAA ATGCCATAAA AAATACTGAC TTGATCAAGG ATGCAGCCAA TGATCCTAGA 421 ACAAAAGAGG CTCTAAATAC TTGTGACGGT CTTCTTGATG TGTCTATTGA TGATCTCAGA 481 AGATCGTTCG ATAAAGTTGG CACCTTTGAT ATTAACAAGA TCAAGGATTA TACCGATGAT 541 CTAAAAACAT GGATCAGTGC TTCGATTACT TATCAAGAAA CTTGCTTAGA TGCTTTTCAA 601 AACACAAGTG GTGACACTGG TGAAAAAATG AAGAAATTGT TAAAGACTGC AGGGGAGCTT 661 ACTAGCAATG GCCTTGCTAT GATTACTAGC TTTGGTGACA TGCTTACTAA CATGAACATT 721 CCTG Predicted gene structure (within gDNA segment 123776 to 121843): Exon 1 123176 122453 ( 724 n); cDNA 1 724 ( 724 n); score: 1.000 MATCH C01HBa0163B20.1- SGN-E332444+ 1.000 724 1.000 C PGS_C01HBa0163B20.1-_SGN-E332444+ (123176 122453) Alignment (genomic DNA sequence = upper lines): ATAAAAAATC CCCAAAAGCT CTCTATCGAT TTAACTATAC AAAAACATTT TTTTTTTTAC 123117 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAAAAAATC CCCAAAAGCT CTCTATCGAT TTAACTATAC AAAAACATTT TTTTTTTTAC 60 TTTGGGAAAA ATACATAAAA GCATCAAAAT ATTATGGCTA AAAAATTAGT CATTGGTGGC 123057 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGGAAAA ATACATAAAA GCATCAAAAT ATTATGGCTA AAAAATTAGT CATTGGTGGC 120 ATAGCCTCAA TTCTTGTGGT GGCTTGTGTT GTTGCAGCAT GTGTCACCAT TACCAAAAAG 122997 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCCTCAA TTCTTGTGGT GGCTTGTGTT GTTGCAGCAT GTGTCACCAT TACCAAAAAG 180 AATGCGAGCG ATGGTGGTGA TGGAGCTAGC AATGGTGGCA TTTCAACCTC TACAAAATCT 122937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AATGCGAGCG ATGGTGGTGA TGGAGCTAGC AATGGTGGCA TTTCAACCTC TACAAAATCT 240 GTTCAAGCAA TGTGTCAACC TACTGACTAC AAAGAAGCTT GTGAGAAGAG TCTTGCATCA 122877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCAAGCAA TGTGTCAACC TACTGACTAC AAAGAAGCTT GTGAGAAGAG TCTTGCATCA 300 GCCAAGAACA CTAGTGACCC AAAGGAACTT ATAAAAGTTG CATTTGAATC AACCATAACT 122817 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAAGAACA CTAGTGACCC AAAGGAACTT ATAAAAGTTG CATTTGAATC AACCATAACT 360 GACATAAAAA ATGCCATAAA AAATACTGAC TTGATCAAGG ATGCAGCCAA TGATCCTAGA 122757 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GACATAAAAA ATGCCATAAA AAATACTGAC TTGATCAAGG ATGCAGCCAA TGATCCTAGA 420 ACAAAAGAGG CTCTAAATAC TTGTGACGGT CTTCTTGATG TGTCTATTGA TGATCTCAGA 122697 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAAGAGG CTCTAAATAC TTGTGACGGT CTTCTTGATG TGTCTATTGA TGATCTCAGA 480 AGATCGTTCG ATAAAGTTGG CACCTTTGAT ATTAACAAGA TCAAGGATTA TACCGATGAT 122637 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGATCGTTCG ATAAAGTTGG CACCTTTGAT ATTAACAAGA TCAAGGATTA TACCGATGAT 540 CTAAAAACAT GGATCAGTGC TTCGATTACT TATCAAGAAA CTTGCTTAGA TGCTTTTCAA 122577 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTAAAAACAT GGATCAGTGC TTCGATTACT TATCAAGAAA CTTGCTTAGA TGCTTTTCAA 600 AACACAAGTG GTGACACTGG TGAAAAAATG AAGAAATTGT TAAAGACTGC AGGGGAGCTT 122517 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACACAAGTG GTGACACTGG TGAAAAAATG AAGAAATTGT TAAAGACTGC AGGGGAGCTT 660 ACTAGCAATG GCCTTGCTAT GATTACTAGC TTTGGTGACA TGCTTACTAA CATGAACATT 122457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAGCAATG GCCTTGCTAT GATTACTAGC TTTGGTGACA TGCTTACTAA CATGAACATT 720 CCTG 122453 |||| CCTG 724 hqPGS_C01HBa0163B20.1-_SGN-E332444+ (123176 122453) ******************************************************************************** EST sequence 265 +strand 689 n (File: SGN-E332870+) 1 CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 61 TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 121 ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 181 ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 241 ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 301 CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 361 ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 421 GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 481 GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 541 ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 601 GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAATGAA GAAATTGTTN AAGACTGCAG 661 GGGAGCTTAC TAGCAATGGC CTTGCTATG Predicted gene structure (within gDNA segment 123785 to 121886): Exon 1 123185 122496 ( 690 n); cDNA 1 689 ( 689 n); score: 0.997 MATCH C01HBa0163B20.1- SGN-E332870+ 0.997 690 1.001 C PGS_C01HBa0163B20.1-_SGN-E332870+ (123185 122496) Alignment (genomic DNA sequence = upper lines): CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 123126 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGTCTCTAA TAAAAAATCC CCAAAAGCTC TCTATCGATT TAACTATACA AAAACATTTT 60 TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 123066 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTTTTACT TTGGGAAAAA TACATAAAAG CATCAAAATA TTATGGCTAA AAAATTAGTC 120 ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 123006 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTGGTGGCA TAGCCTCAAT TCTTGTGGTG GCTTGTGTTG TTGCAGCATG TGTCACCATT 180 ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 122946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAAAAAGA ATGCGAGCGA TGGTGGTGAT GGAGCTAGCA ATGGTGGCAT TTCAACCTCT 240 ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 122886 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAAAATCTG TTCAAGCAAT GTGTCAACCT ACTGACTACA AAGAAGCTTG TGAGAAGAGT 300 CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 122826 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTTGCATCAG CCAAGAACAC TAGTGACCCA AAGGAACTTA TAAAAGTTGC ATTTGAATCA 360 ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 122766 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCATAACTG ACATAAAAAA TGCCATAAAA AATACTGACT TGATCAAGGA TGCAGCCAAT 420 GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 122706 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCCTAGAA CAAAAGAGGC TCTAAATACT TGTGACGGTC TTCTTGATGT GTCTATTGAT 480 GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 122646 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATCTCAGAA GATCGTTCGA TAAAGTTGGC ACCTTTGATA TTAACAAGAT CAAGGATTAT 540 ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 122586 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCGATGATC TAAAAACATG GATCAGTGCT TCGATTACTT ATCAAGAAAC TTGCTTAGAT 600 GCTTTTCAAA ACACAAGTGG TGACACTGGT GAAAAAATGA AGAAATTGTT AAAGACTGCA 122526 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| ||||||||| GCTTTTCAAA ACACAAGTGG TGACACTGGT G-AAAAATGA AGAAATTGTT NAAGACTGCA 659 GGGGAGCTTA CTAGCAATGG CCTTGCTATG 122496 |||||||||| |||||||||| |||||||||| GGGGAGCTTA CTAGCAATGG CCTTGCTATG 689 hqPGS_C01HBa0163B20.1-_SGN-E332870+ (123185 122496) ******************************************************************************** EST sequence 209 +strand 799 n (File: SGN-E577982+) 1 TTTTTTTTTT TTTTTTAAAT ATATTTAACT TCAAATACTT TTTTTCTTCA AATATCACCC 61 AATTCATATC GATGCAACTA CTTACTAGTA ACTACAACCA AAAGCTTACA TATTCTACTC 121 TGAAAACTCA AAAGCATATA TATATCCATA TCGATCATGG ACTAACAAGA AAAAAAGAAC 181 TATCAATCAC ATTCAGTTAC CATAAAACAC GATTTATTTA TTTAACAATC TTGAAGGTCA 241 ATTATAAGTG AAACTACACT TATAACTAAA CTCCTTGTAC TAGTTGGAAC AAGCATTTCT 301 TAGCCTGTAA CCACGTTTTC TTGCATACTC AACAAGTTTA TCCAACTCTT TCTTATCAAT 361 AAGCCCATCA CCATTTTTAT CAGCCCGGTG AAGGGCTCGG CCCGCTCGAT ATCCCGGAAA 421 AGTGGACCCC AGCTGCCGGA ATGCCTCCGT GAGATCCTCT TTAGTGAGGT AGCCATCTCT 481 GTTGAAATCA CATTGTTTGA AGATATTTAT CAATTGAACT TCAGTCAAAG GTACTTGTCC 541 ACAGGTACAT CGTATGATGT TCCTGGGGCG GAAAAAATCA AACATATTGT AATTTTTATC 601 CGAACAAGAT TTTTTAATTT TTGGACATAC GAAGGGGAAC AACCTTAGTT TCAAGAGTTT 661 AAGAAACGTC CGAAAGAAAG TACTCTTGGA GAAAGATTCC ATGAGAGAAA CTCTACCTTA 721 ATCGATGTTC AAACTTTAAT GGTGCTGCCC GGAAAACTCC TCCAGACACT CCCATTCACT 781 TCAAAGTATA CTCTCTCGA Predicted gene structure (within gDNA segment 134053 to 126371): Exon 1 128113 128091 ( 23 n); cDNA 603 624 ( 22 n); score: 0.739 Intron 1 128090 127232 ( 859 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 1.00) Exon 2 127231 127052 ( 180 n); cDNA 625 799 ( 175 n); score: 0.961 PPA cDNA 16 1 MATCH C01HBa0163B20.1- SGN-E577982+ 0.961 203 0.254 C PGS_C01HBa0163B20.1-_SGN-E577982+ (128113 128091,127231 127052) Alignment (genomic DNA sequence = upper lines): AACCCAAATT TTGAATTATT TGGATATCAT TTATATTTTT CATTGATTTT TGTTCTAATA 128054 ||| | || || |||| || ||| AACAAGATTT TTTAATT-TT TGG....... .......... .......... .......... 624 TTCATAAATT TAGAACTCTA AGTTAAGTCT CAACATTTTC GTGAAATAAT AAATTTTTTT 127994 .......... .......... .......... .......... .......... .......... 624 TTTTAATTAG AATTCTAAAT TAAATTTCAA TCATTTACAT GAAAGAATAA TTTTCTAATT 127934 .......... .......... .......... .......... .......... .......... 624 TAATTAGAAT TCCAATTTAA ATCTCAATAT TTACATAAAA GAATTAATAT TCTATTTTTA 127874 .......... .......... .......... .......... .......... .......... 624 ATTAAAATTC TAAATTAAAT CTCAATGTTT ACATAAGAGA ATTTATTTTC CAACTTTAAT 127814 .......... .......... .......... .......... .......... .......... 624 TAGAATTTTA ATTTACTATT GTTATTATTT TTAATTAAAT TCGCTTGAAT AGGGAGGTTG 127754 .......... .......... .......... .......... .......... .......... 624 AGGGTTCGAA CCCCCACAGC CCCCTTATTT TTCCTCTCAT TTTCGCTGAA GAGGAGGCTG 127694 .......... .......... .......... .......... .......... .......... 624 TGAGGTGGTG GGTTCGAACC CCCACAGCCC CTCTATTTTA TTTTATTTTT TAATTCTTTG 127634 .......... .......... .......... .......... .......... .......... 624 ACATCCAAAA ATTTCCAGAT TCTTTTTAAA CCTATTTCTA TGTTTTTGGA AATTTATTCC 127574 .......... .......... .......... .......... .......... .......... 624 ACTATTTTTC TGCACTTTTT CATCAAGTTT CACATTAGTT CTTAGGGAGA TTTCATGGTT 127514 .......... .......... .......... .......... .......... .......... 624 CATTCACTTC ACTATGCTTC ATCAAAATGA ACATCACATT GCACACCCAT TTCACACATA 127454 .......... .......... .......... .......... .......... .......... 624 AAACACATGA TAAATAAACA ACTTATATAC CCCAAAACAA TGCCTAAAAC ACTGCCCTAT 127394 .......... .......... .......... .......... .......... .......... 624 ACACACCCAT ACATCAACTT TTTCCGGTCA TATTTTGATG ATCATTATCG CGATTTCCCG 127334 .......... .......... .......... .......... .......... .......... 624 CACATAAACA CATTCATATT TAATTTAAAC ACATCATTCA TGCAAAAATC TAGCAGCACA 127274 .......... .......... .......... .......... .......... .......... 624 ACATACCCAT CCTACAAATT CATTAGGGAG CTAAGGACAA GGACATACGA AGGGGAACAA 127214 |||||||| |||||||||| .......... .......... .......... .......... ..ACATACGA AGGGGAACAA 642 CCTTAGTTTC AAGAGTTTAA GAAACGTCCG AAAGAAAGTA CTCTTGGAGA AAGAATTCCA 127154 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| CCTTAGTTTC AAGAGTTTAA GAAACGTCCG AAAGAAAGTA CTCTTGGAGA AAG-ATTCCA 701 TGAGAGAAAC TCATACCTTA ATCGATGTTC AAACTTTAAT GTTGCTGCCC GGAAAACTCC 127094 |||||||||| || ||||||| |||||||||| |||||||||| | |||||||| |||||||||| TGAGAGAAAC TC-TACCTTA ATCGATGTTC AAACTTTAAT GGTGCTGCCC GGAAAACTCC 760 TCCAAACCAC TCCCAATTCA CTTCAAAGTA TACCTCTCTC GA 127052 |||| | ||| |||| ||||| |||||||||| || ||||||| || TCCAGA-CAC TCCC-ATTCA CTTCAAAGTA TA-CTCTCTC GA 799 hqPGS_C01HBa0163B20.1-_SGN-E577982+ (128113 128091,127231 127052) ******************************************************************************** EST sequence 258 +strand 687 n (File: SGN-E332471+) 1 GAAGATGGAG AACGTGAGAG AGGGAGTTTA GAAGCGTGAG AGAGAGAGGG CTAATTGGAT 61 TAGGAGACTA ATTCAAGAAT TAGTCAAATA ACATTAAAAT AAATAAATAC AAATCTGTTT 121 TATTTATTTA TTTATTTATT CATTTAAAAC GTGAAAGGAC AATTATGCCC TTAAATACCT 181 ATTTATTCTT ATTTACATAA TTCTCTTTTT TTTTGAATCG TTACATGAGT ATTGGATGTT 241 CTGTTGTAGT CATTTAAGGT TCACCAGAGT GGTTTATTCC TAGTTCATTC TTCTTGATCA 301 AGAGAGGTTG TCGGGTGGTG TTCTTTTGGC TGTTATGTGA TCATTGCCAC ATTTTGACTC 361 ATTTAACTGC AGAATAGTAA TACTTTTGTT TCCCTACATC TCTTTTGAAT GATGATTCTT 421 TACTTAAGCT ACATATTTCA ACATGTCTAA TAAAAATGTT GTCCAGTCCA GTTATTATAT 481 TTTTGTAGTC TTTTTCCTTT GGTTGAGTGA CTGAGAGTCT TGCTTGAGTT AATATTTGAC 541 AAGTCACTCA TACAGACCGC TTTAGATATC TTTCCTTGTT CTCGGAATAT AATTTTTTTG 601 AGTGTATCTG GGAACTATTG TTTCTTGGGT ATCTTTAGGT TGAGTGTATA TTTTACCTTC 661 CACGGCAGTA ATGAGCATTT TTCTATG Predicted gene structure (within gDNA segment 127540 to 121322): Exon 1 126940 126703 ( 238 n); cDNA 1 231 ( 231 n); score: 0.958 MATCH C01HBa0163B20.1- SGN-E332471+ 0.958 238 0.346 C PGS_C01HBa0163B20.1-_SGN-E332471+ (126940 126703) Alignment (genomic DNA sequence = upper lines): GAAGATGGAG AACGTGAGAG AGGGAGTTTA GAAGCGTGAG AGAGAGAGAG GGCTAATTGG 126881 |||||||||| |||||||||| |||||||||| ||||||| | |||||||||| |||||||||| GAAGATGGAG AACGTGAGAG AGGGAGTTTA GAAGCGT--G AGAGAGAGAG GGCTAATTGG 58 ATTAGGAGAC TAATTCAAGA ATTAGTCAAA TAACATTAAA ATAAATAAAT ACAAATCTGT 126821 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATTAGGAGAC TAATTCAAGA ATTAGTCAAA TAACATTAAA ATAAATAAAT ACAAATCTGT 118 TTTATTTATT TATTTATTTA TTCATTTAAA ACGTGAAAGG ACAATTATGC CCTTAAATAC 126761 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTATTTATT TATTTATTTA TTCATTTAAA ACGTGAAAGG ACAATTATGC CCTTAAATAC 178 CTATTTATTC TTATTTACAT AATTCTCTTC TCTTTTTTTT CGAATCGTTA CAATAATA 126703 |||||||||| |||||||||| || | || || | |||||||| ||||||||| || | || CTATTTATTC TTATTTACAT AA-T-TC-TC T-TTTTTTTT -GAATCGTTA CATGAGTA 231 hqPGS_C01HBa0163B20.1-_SGN-E332471+ (126940 126703) ******************************************************************************** EST sequence 268 +strand 548 n (File: SGN-E378094+) 1 TTTTTTTTTT TGGATTAGGA GACTAATTCA AGAATTAGTC AAATAACATT AAAATAAATA 61 AATACAAATC TGTTTTATTT ATTTATTTAT TTATTCATTT AAAACGTGAA AGGACAATTA 121 TGCCCTTAAA TACCTATTTA TTCTTATTTA CATAATTCTC TTCTTTTTTT TTGAATCGTT 181 ACAAATTAAC CTATGTAAAG TAAGAATGAC GTAAGTAGGC TTGTTTGCGA CTTCTGAGAG 241 GTCAACGACG CCGGTCTCAT ATGGGGTCTG AATTCCAGGA TCAGAAATAA TGCATAGAGA 301 AACGACCACT TCCTTCCTTA TGAGACGTCA AGATTAGACC AAGTTTTTTT TCCCCTTCAT 361 TCATCAGTGA AACCGTGAAA CCGTAAGGAA ATGTAGCAAG ACCATTAAGT GTTGTCTAAT 421 TTTAGAATCA CCTCTATACA TAAATTATAA TCCGATTCTC ACCGTTGAAT AAACAATCAA 481 AATGGAGTGA GTTTGACTAC TCTTTATTTC AATCAAGTCT AGTGAATGGA TATTAGACTC 541 GGGGAGCT Predicted gene structure (within gDNA segment 127574 to 122280): Exon 1 126884 126708 ( 177 n); cDNA 10 184 ( 175 n); score: 0.989 MATCH C01HBa0163B20.1- SGN-E378094+ 0.989 177 0.323 C PGS_C01HBa0163B20.1-_SGN-E378094+ (126884 126708) Alignment (genomic DNA sequence = upper lines): TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 126825 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 69 CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 126765 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 129 ATACCTATTT ATTCTTATTT ACATAATTCT CTTCTCTTTT TTTTCGAATC GTTACAA 126708 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||| ATACCTATTT ATTCTTATTT ACATAATTCT CTTCT-TTTT TTTT-GAATC GTTACAA 184 hqPGS_C01HBa0163B20.1-_SGN-E378094+ (126884 126708) ******************************************************************************** EST sequence 271 +strand 598 n (File: SGN-E227035+) 1 TTTTTTTTTT TGGATTAGGA GACTAATTCA AGAATTAGTC AAATAACATT AAAATAAATA 61 AATACAAATC TGTTTTATTT ATTTATTTAT TTATTCATTT AAAACGTGAA AGGACAATTA 121 TGCCCTTAAA TACCTATTTA TTCTTATTTA CATAATTCTC TTCTTTTTTT TTGAATCGTT 181 ACAAATTAAC CTATGTAAAG TAAGAATGAC GTAAGTAGGC TTGTTTGCGA CTTCTGAGAG 241 GTCAACGACG CCGGTCTCAT ATGGGGTCTG AATTCCAGGA TCAGAAATAA TGCATAGAGA 301 AACGACCACT TCCTTCCTTA TGAGACGTCA AGATTAGACC AAGTTTTTTT TCCCCTTCAT 361 TCATCAGTGA AACCGTGAAA CCGTAAGGAA ATGTAGCAAG ACCATTAAGT GTTGTCTAAT 421 TTTAGAATCA CCTCTATACA TAAATTATAA TCCGATTCTC ACCGTTGAAT AAACAATCAA 481 AATGGAGTGA GTTTGACTAC TCTTTATTTC AATCAAGTCT AGTGAATGGA TATTAGACTC 541 GGGAGCTTCA GAACATTTAT CTTCTAATCC TGAGCTTTTC ACTTACCTTA CTCCTTTT Predicted gene structure (within gDNA segment 127574 to 121780): Exon 1 126884 126708 ( 177 n); cDNA 10 184 ( 175 n); score: 0.989 MATCH C01HBa0163B20.1- SGN-E227035+ 0.989 177 0.296 C PGS_C01HBa0163B20.1-_SGN-E227035+ (126884 126708) Alignment (genomic DNA sequence = upper lines): TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 126825 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 69 CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 126765 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 129 ATACCTATTT ATTCTTATTT ACATAATTCT CTTCTCTTTT TTTTCGAATC GTTACAA 126708 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||||| ATACCTATTT ATTCTTATTT ACATAATTCT CTTCT-TTTT TTTT-GAATC GTTACAA 184 hqPGS_C01HBa0163B20.1-_SGN-E227035+ (126884 126708) ******************************************************************************** EST sequence 254 +strand 535 n (File: SGN-E392260+) 1 TTTTTTTTTT TTGGATTAGT AGACTAGCCC CAGAATTAGC CAGATAACCT TAAAAACTAT 61 TTATACTAAT CTGTTTTATT GATTTATTTA ATTATTCATT GTAAACGTGA AAGGACAATG 121 TGGCCCTTAA ATACCTATTT ATTCTTATTT ACATAATTCT CTTCTTTTTT TTTGAATCGT 181 TACTAATTAA CCTATGTAAA GTAAGAATGA CGTAAGTAGG CTTGTTTGCG ACTTCTGATA 241 GGTCAACGAC GCCGGTCTCA TATGGGGTCT GAATTCCAGG ATCAGAAATA ATGCATAGAG 301 AAACGACCAC TTCCTTCCTT ATGAGACGTC CAGATTAGAC CAAGTTTTTT TTCCCCTTCA 361 TTCATCAGTG AAACCGTGAA ACCGTAAGGA AATGTAGCAA GACCATTAAG TGTTGTCTAA 421 TTTTAGAATC ACCTCTATAC ATAAATTATA ATCCGATTCT CACCGGTGAG TAAACAATCA 481 AAATGGAGTG AGTTTGACTA CTCTTTATTT CCATCAAGTC TAGTGAATGG ATATT Predicted gene structure (within gDNA segment 128412 to 122420): Exon 1 126884 126710 ( 175 n); cDNA 11 183 ( 173 n); score: 0.869 PPA cDNA 10 1 MATCH C01HBa0163B20.1- SGN-E392260+ 0.869 175 0.327 C PGS_C01HBa0163B20.1-_SGN-E392260+ (126884 126710) Alignment (genomic DNA sequence = upper lines): TTGGATTAGG AGACTAATTC AAGAATTAGT CAAATAACAT TAAAATAAAT AAATACAAAT 126825 ||||||||| |||||| | |||||||| || ||||| | ||||| || |||| ||| TTGGATTAGT AGACTAGCCC CAGAATTAGC CAGATAACCT TAAAAACTAT TTATACTAAT 70 CTGTTTTATT TATTTATTTA TTTATTCATT TAAAACGTGA AAGGACAATT ATGCCCTTAA 126765 |||||||||| ||||||||| ||||||||| |||||||| ||||||||| |||||||| CTGTTTTATT GATTTATTTA ATTATTCATT GTAAACGTGA AAGGACAATG TGGCCCTTAA 130 ATACCTATTT ATTCTTATTT ACATAATTCT CTTCTCTTTT TTTTCGAATC GTTAC 126710 |||||||||| |||||||||| |||||||||| ||||| |||| |||| ||||| ||||| ATACCTATTT ATTCTTATTT ACATAATTCT CTTCT-TTTT TTTT-GAATC GTTAC 183 hqPGS_C01HBa0163B20.1-_SGN-E392260+ (126884 126710) ******************************************************************************** EST sequence 46 -strand 484 n (File: SGN-E202664-) 1 TGGGAAAGGG ACCGAGAGAG AAGAAAACTC ATACCTTAAT CGATGTTCAA ACTTTAATGT 61 TGTTACCCGG AAAACTCCTC CAAAGCACTC CCAATTCACT TCAACGTACA CCTCTCTCGA 121 CAAACCTCTC TTAGCCTTGA CGTTTTGATT ACTTTTTCTT TTGCTTAAAA AATTTTTGTT 181 AGTTCTTCAA GCATGAAAAC TGTTGATGTT TTGTCAGAAA TAATGTGAGG AAGATGGAGG 241 ACGTGAGAGA GGGAGTTAAG AAGCGTGAGA GAGAGAGGAC TATTTGGATT AGGAGACTAA 301 TTCAAGAATT AGTCAAATAA CATTTAAAAT AAATAAATAC AAATCTATTT TATTTATTTA 361 CTTATTTATT TATTTATTCA TTTAAAACGT GAAAGGACAA TTATGCCCTT AAATACCTAT 421 TTATTCTTAT TTATATCATT CTTTTTTTTT GAATCGTTAC AGTGACCCTT TTATGCCTAG 481 GGTA Predicted gene structure (within gDNA segment 127997 to 125634): Exon 1 127147 126735 ( 413 n); cDNA 25 442 ( 418 n); score: 0.892 MATCH C01HBa0163B20.1- SGN-E202664- 0.892 413 0.853 C PGS_C01HBa0163B20.1-_SGN-E202664- (127147 126735) Alignment (genomic DNA sequence = upper lines): AAACTCATAC CTTAATCGAT GTTCAAACTT TAATGTTGCT GCCCGGAAAA CTCCTCCAAA 127088 |||||||||| |||||||||| |||||||||| |||||||| | ||||||||| |||||||||| AAACTCATAC CTTAATCGAT GTTCAAACTT TAATGTTGTT ACCCGGAAAA CTCCTCCAAA 84 CCACTCCCAA TTCACTTCAA AGTATACCTC TCTCGACGAA CCTCTCTTAG CCTTGACGTT 127028 ||||||||| |||||||||| ||| ||||| ||||||| || |||||||||| |||||||||| GCACTCCCAA TTCACTTCAA CGTACACCTC TCTCGACAAA CCTCTCTTAG CCTTGACGTT 144 TTGATTACTT TTTCTTTTGC TTAAAAAAAT TTTTTGTGAG TTCTTCAAGC ATGAAAATTA 126968 |||||||||| |||||||||| || |||||| ||||||| || |||||||||| ||||||| | TTGATTACTT TTTCTTTTGC TT-AAAAAA- TTTTTGTTAG TTCTTCAAGC ATGAAAACTG 202 TTGATATTTT GGCAGAAATA ATGTGAGGAA GATGGAGAAC GTGAGAGAGG GAGTTTAGAA 126908 ||||| |||| | |||||||| |||||||||| ||||||| || |||||||||| ||||| |||| TTGATGTTTT GTCAGAAATA ATGTGAGGAA GATGGAGGAC GTGAGAGAGG GAGTTAAGAA 262 GCGTGAGAGA GAGAGAGGGC TAATTGGATT AGGAGACTAA TTCAAGAATT AGTCAAATAA 126848 |||| |||| |||||||| | || ||||||| |||||||||| |||||||||| |||||||||| GCGT--GAGA GAGAGAGGAC TATTTGGATT AGGAGACTAA TTCAAGAATT AGTCAAATAA 320 CA-TTAAAAT AAATAAATAC AAATC---TG T-TTTA--T- -TTATTTATT TATTTATTCA 126797 || ||||||| |||||||||| ||||| | | |||| | ||||||||| |||||||||| CATTTAAAAT AAATAAATAC AAATCTATTT TATTTATTTA CTTATTTATT TATTTATTCA 380 TTTAAAACGT GAAAGGACAA TTATGCCCTT AAATACCTAT TTATTCTTAT TTACATAATT 126737 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| || ||| TTTAAAACGT GAAAGGACAA TTATGCCCTT AAATACCTAT TTATTCTTAT TTATATCATT 440 CT 126735 || CT 442 hqPGS_C01HBa0163B20.1-_SGN-E202664- (127147 126735) ******************************************************************************** EST sequence 26 +strand 687 n (File: SGN-E389994+) 1 ACATAATGAA ATGAATGATA TCAAAGTTGT TTGGATAGGA TAATCACAAG GTGAGTTAGA 61 TTCAAGTAAT GACATTAGGT CATTCTTAGT CATTGCACAA TGAACCTAAT GAAAGTCTCA 121 AACTACATCC TAGGTATAGT TTGTGTTTAC ACTGGCCTAT GAATGAAATG AAATGTAGTA 181 CGTATGAATG AAAGAAGCAG GCTATGTGTT TGCTAATGAA GACTCCCTAG TTGAGGTCCC 241 ATTTGTTGAG CCCTCATTTC TGGGAATTCT TAATGTTAAG TCCATGATTC AAAGGTCTCA 301 TGGCATATGA TAAATGATAT TAAAGAAGTG ATGTGCTACA TGCAAATTGT ATTTTATGCC 361 ATATCATATG TGCTATGTGT AAATGTTATG TGCTATGTGG AAATGTTAAA AACTGATGAT 421 GTACGTTATT CTCATGGCAT AACTTTCCTA TTCTAAATCT AGAAAGCTCA CTGACTTTCC 481 TAATCCATAT TTGGAAACCT TCGTAATCAC AAATTGGCAG GTCCACTAAC TTGACTTCCC 541 AAAACCATGT TGTTAGGAAA GAATTATTCT TTCTTATGCA TGTCATTTGG TGTGTGCTTG 601 CATATACCCA TACTTAGTAC AAGTGTGTAC TAACCCTATA CAAACTCTAC TATTTTANGT 661 GCAACCACNA CTGGACGAAT GAACTAA Predicted gene structure (within gDNA segment 127287 to 134102): Exon 1 128960 129352 ( 393 n); cDNA 3 390 ( 388 n); score: 0.805 Intron 1 129353 129782 ( 430 n); Pd: 0.000 (s: 0.62), Pa: 0.509 (s: 0) Exon 2 129783 129821 ( 39 n); cDNA 391 425 ( 35 n); score: 0.692 MATCH C01HBa0163B20.1+ SGN-E389994+ 0.805 432 0.629 C PGS_C01HBa0163B20.1+_SGN-E389994+ (128960 129352,129783 129821) Alignment (genomic DNA sequence = upper lines): ATAAAGAAAT AAATGATACC GAAGGTGTTA GGATAGGATA ATCAAGAGGT GAGCTAGATT 129019 |||| ||||| ||||||| | ||| |||| |||||||||| |||| |||| ||| |||||| ATAATGAAAT GAATGATATC AAAGTTGTTT GGATAGGATA ATCACAAGGT GAGTTAGATT 62 CAGGTAATGA CATTAGGTCA TTCCTGATCA TTGCACAGCA AACCCGATGA GAGTCTTAAA 129079 || ||||||| |||||||||| ||| | ||| ||||||| |||| |||| ||||| ||| CAAGTAATGA CATTAGGTCA TTCTTAGTCA TTGCACAATG AACCTAATGA AAGTCTCAAA 122 CTACATCCTA GGTATAGCTG GTGTTCGCAC TGGCCTATGA ATGAATTGAA ATGAAATACG 129139 |||||||||| ||||||| | ||||| ||| |||||||||| ||||| |||| ||| | |||| CTACATCCTA GGTATAGTTT GTGTTTACAC TGGCCTATGA ATGAAATGAA ATGTAGTACG 182 AATGAATGAG TGAAGCAGAC TCTGTGTTTG CTAAAGAAGG CTCCCTAGTT GAGGTCCCAT 129199 |||||||| ||||||| | | |||||||| |||| |||| |||||||||| |||||||||| TATGAATGAA AGAAGCAGGC TATGTGTTTG CTAATGAAGA CTCCCTAGTT GAGGTCCCAT 242 ATGTTGAGCC CTCATTT-TG GAAAGTCTTA AAGTTAAGTC TATGATAATA AGGTCTCATG 129258 ||||||||| ||||||| || | || ||||| | |||||||| ||||| | |||||||||| TTGTTGAGCC CTCATTTCTG GGAATTCTTA ATGTTAAGTC CATGATTCAA AGGTCTCATG 302 GTATACGAAT GAATAATATG AAAGAAAGTA TGTGTTATAT GTTATGTGTT ATATGAATAT 129318 | ||| | || ||| |||| |||||| | |||| || || | | || | || | ||| GCATATG-AT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTG-T AT-T--TTAT 357 GTTATGTTTT GTGTGCTATA CGATAATTAT AATGATGCAT GTCACTCTCA TGGCATAACT 129378 | || | | |||||||| | ||| | | ||| GCCATATCAT ATGTGCTATG TG-TAAATGT TATG...... .......... .......... 390 TTCCCAATCT TAATTTGGCA AGTCCACTGA CTTGACTTCC AAAAATCATG TTGTTAGGAA 129438 .......... .......... .......... .......... .......... .......... 390 AGAGCTATTC TTCCTCATGC ATGTCCCTGG TGTGTACTTG CATATACTCA TACTTAGTAC 129498 .......... .......... .......... .......... .......... .......... 390 AAGTGTGTAC TAATTCCATA CGAACATCTA CTTTTAGGTG CAGGCACAGG TGGACGCTAG 129558 .......... .......... .......... .......... .......... .......... 390 AGCTACAGGT TCGTTGTTGC AGCTATCCGG ACATCAGTAT TCATCCGGAG TTTGGTAGGT 129618 .......... .......... .......... .......... .......... .......... 390 CCTCATGCTT TCGAGGATGC TACTGTTTTA CATTCTAGCG TAGTTTTAGA GTTGAGCTAG 129678 .......... .......... .......... .......... .......... .......... 390 CGGAGCATGT TCCACTAGCG TTTCTTTCCT GTTTTGGTTC AAACTTTGTA TTGGTGCTAT 129738 .......... .......... .......... .......... .......... .......... 390 TTTGGCCGAT ATACAATTAA TACTTAATGA ATTATTTCTT TCAGTTGCTT ATCTCTTAAA 129798 ||| | || | ||| .......... .......... .......... .......... ....-TGC-T ATGT-GGAAA 403 TGTTAGATGG TTGATGATGA ACG 129821 ||||| | |||||||| ||| TGTTA-AAAA CTGATGATGT ACG 425 hqPGS_C01HBa0163B20.1+_SGN-E389994+ (128960 129352) ******************************************************************************** EST sequence 54 +strand 617 n (File: SGN-E235464+) 1 CATAATGAAA TGAATGATAT CAAAGTTGTT TGGATAGGAT AATCACAAGG TGAGTTAGAT 61 TCAAGTAATG ACATTAGGTC ATTCTTAGTC ATTGCACAAT GAACCTAATG AAAGTCTCAA 121 ACTACATCCT AGGTATAGTT TGTGTTTACA CTGGCCTATG AATGAAATGA AATGTAGTAC 181 GTATGAATGA AAGAAGCAGG CTATGTGTTT GCTAATGAAG ACTCCCTAGT TGAGGTCCCA 241 TTTGTTGAGC CCTCATTTCT GGGAATTCTT AATGTTAAGT CCATGATTCA AAGGTCTCAT 301 GGCATATGAT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTGTA TTTTATGCCA 361 TATCATATGT GCTATGTGTA AATGTTATGT GCTATGTGGA AATGTTAAAA ACTGATGATG 421 TACGTTATTC TCATGGCATA ACTTTCCTAT TCTAAATCTA GAAAGCTCAC TGACTTTCCT 481 AATCCATATT TGGAAACCTT CGTAATCACA AATTGGCAGG TCCACTAACT TGACTTCCAA 541 AAACCATGTT GTTAGGAAAG AATTATTCTT TCTTATGCAT GTCATTGGTG TGTGCTTGCA 601 TATACCCATA CTTAGTA Predicted gene structure (within gDNA segment 127297 to 130611): Exon 1 128960 129352 ( 393 n); cDNA 2 389 ( 388 n); score: 0.805 Intron 1 129353 129782 ( 430 n); Pd: 0.000 (s: 0.62), Pa: 0.509 (s: 0) Exon 2 129783 129821 ( 39 n); cDNA 390 424 ( 35 n); score: 0.692 MATCH C01HBa0163B20.1+ SGN-E235464+ 0.805 432 0.700 C PGS_C01HBa0163B20.1+_SGN-E235464+ (128960 129352,129783 129821) Alignment (genomic DNA sequence = upper lines): ATAAAGAAAT AAATGATACC GAAGGTGTTA GGATAGGATA ATCAAGAGGT GAGCTAGATT 129019 |||| ||||| ||||||| | ||| |||| |||||||||| |||| |||| ||| |||||| ATAATGAAAT GAATGATATC AAAGTTGTTT GGATAGGATA ATCACAAGGT GAGTTAGATT 61 CAGGTAATGA CATTAGGTCA TTCCTGATCA TTGCACAGCA AACCCGATGA GAGTCTTAAA 129079 || ||||||| |||||||||| ||| | ||| ||||||| |||| |||| ||||| ||| CAAGTAATGA CATTAGGTCA TTCTTAGTCA TTGCACAATG AACCTAATGA AAGTCTCAAA 121 CTACATCCTA GGTATAGCTG GTGTTCGCAC TGGCCTATGA ATGAATTGAA ATGAAATACG 129139 |||||||||| ||||||| | ||||| ||| |||||||||| ||||| |||| ||| | |||| CTACATCCTA GGTATAGTTT GTGTTTACAC TGGCCTATGA ATGAAATGAA ATGTAGTACG 181 AATGAATGAG TGAAGCAGAC TCTGTGTTTG CTAAAGAAGG CTCCCTAGTT GAGGTCCCAT 129199 |||||||| ||||||| | | |||||||| |||| |||| |||||||||| |||||||||| TATGAATGAA AGAAGCAGGC TATGTGTTTG CTAATGAAGA CTCCCTAGTT GAGGTCCCAT 241 ATGTTGAGCC CTCATTT-TG GAAAGTCTTA AAGTTAAGTC TATGATAATA AGGTCTCATG 129258 ||||||||| ||||||| || | || ||||| | |||||||| ||||| | |||||||||| TTGTTGAGCC CTCATTTCTG GGAATTCTTA ATGTTAAGTC CATGATTCAA AGGTCTCATG 301 GTATACGAAT GAATAATATG AAAGAAAGTA TGTGTTATAT GTTATGTGTT ATATGAATAT 129318 | ||| | || ||| |||| |||||| | |||| || || | | || | || | ||| GCATATG-AT AAATGATATT AAAGAAGTGA TGTGCTACAT GCAAATTG-T AT-T--TTAT 356 GTTATGTTTT GTGTGCTATA CGATAATTAT AATGATGCAT GTCACTCTCA TGGCATAACT 129378 | || | | |||||||| | ||| | | ||| GCCATATCAT ATGTGCTATG TG-TAAATGT TATG...... .......... .......... 389 TTCCCAATCT TAATTTGGCA AGTCCACTGA CTTGACTTCC AAAAATCATG TTGTTAGGAA 129438 .......... .......... .......... .......... .......... .......... 389 AGAGCTATTC TTCCTCATGC ATGTCCCTGG TGTGTACTTG CATATACTCA TACTTAGTAC 129498 .......... .......... .......... .......... .......... .......... 389 AAGTGTGTAC TAATTCCATA CGAACATCTA CTTTTAGGTG CAGGCACAGG TGGACGCTAG 129558 .......... .......... .......... .......... .......... .......... 389 AGCTACAGGT TCGTTGTTGC AGCTATCCGG ACATCAGTAT TCATCCGGAG TTTGGTAGGT 129618 .......... .......... .......... .......... .......... .......... 389 CCTCATGCTT TCGAGGATGC TACTGTTTTA CATTCTAGCG TAGTTTTAGA GTTGAGCTAG 129678 .......... .......... .......... .......... .......... .......... 389 CGGAGCATGT TCCACTAGCG TTTCTTTCCT GTTTTGGTTC AAACTTTGTA TTGGTGCTAT 129738 .......... .......... .......... .......... .......... .......... 389 TTTGGCCGAT ATACAATTAA TACTTAATGA ATTATTTCTT TCAGTTGCTT ATCTCTTAAA 129798 ||| | || | ||| .......... .......... .......... .......... ....-TGC-T ATGT-GGAAA 402 TGTTAGATGG TTGATGATGA ACG 129821 ||||| | |||||||| ||| TGTTA-AAAA CTGATGATGT ACG 424 hqPGS_C01HBa0163B20.1+_SGN-E235464+ (128960 129352) ******************************************************************************** EST sequence 219 -strand 715 n (File: SGN-E389503-) 1 CAAACTACAT CCTAGGTATA GTTTGTGTTT ACACTGGCCT ATGAATGAAA TGAAATGTAG 61 TACGTATGAA TGAAAGAAGC AGGCTATGTG TTTGCTAATG AAGACTCCCT AGTTGAGGTC 121 CCATTTGTTG AGCCCTCATT TCTGGGAATT CTTAATGTTA AGTCCATGAT TCAAAGGTCT 181 CATGGCATAT GATAAATGAT ATTAAAGAAG TGATGTGCTA CATGCAAATT GTATTTTATG 241 CCATATCATA TGTGCTATGT GTAAATGTTA TGTGCTATGT GGAAATGTTA AAAACTGATG 301 ATGTACGTTA TTCTCATGGC ATAACTTTCC TATTCTAAAT CTAGAAAGCT CACTGACTTT 361 CCTAATCCAT ATTTGGAAAC CTTCGTAATC ACAAATTGGC AGGTCCACTA ACTTGACTTC 421 CAAAAACCAT GTTGTTAGGA AAGAATTATT CTTTCTTATG CATGTCATTG GTGTGTGCTT 481 GCATATACCC ATACTTAGTA CAAGTGTGTA CTAACCCTAT ACAAACTCTA CTATTTTAGG 541 TGCAACCACA ACTGGACGAA TGAACTAAAG GATCTTCGCT GCAGTTATTC GGACGTTTAG 601 CATTCAACCG GCTTTGGTAG GTCCTCATGA TTTCGAGGAT GCTGTTGTTT TATATTCTAG 661 CTTAGTTTTA GAGTTGATGT AGTGGATCAT GTTCCACTAG TGTTTCCTTC CTATT Predicted gene structure (within gDNA segment 128457 to 132751): Exon 1 129375 129711 ( 337 n); cDNA 378 715 ( 338 n); score: 0.815 MATCH C01HBa0163B20.1+ SGN-E389503- 0.815 337 0.471 C PGS_C01HBa0163B20.1+_SGN-E389503- (129375 129711) Alignment (genomic DNA sequence = upper lines): AACTTTCCCA ATCTTAATTT GGCAAGTCCA CTGACTTGAC TTCCAAAAAT CATGTTGTTA 129434 ||| ||| | ||| || || |||| ||||| || ||||||| ||||||||| |||||||||| AACCTTCGTA ATCACAAATT GGCAGGTCCA CTAACTTGAC TTCCAAAAAC CATGTTGTTA 437 GGAAAGAGCT ATTCTTCCTC ATGCATGTCC CTGGTGTGTA CTTGCATATA CTCATACTTA 129494 ||||||| | |||||| || ||||||||| |||||||| |||||||||| | |||||||| GGAAAGAATT ATTCTTTCTT ATGCATGTCA TTGGTGTGTG CTTGCATATA CCCATACTTA 497 GTACAAGTGT GTACTAATTC CATACGAACA TCTAC--TTT TAGGTGCAGG CACAGGTGGA 129552 |||||||||| ||||||| | |||| ||| ||||| ||| |||||||| |||| |||| GTACAAGTGT GTACTAACCC TATACAAAC- TCTACTATTT TAGGTGCAAC CACAACTGGA 556 CGCTAGAGCT ACAGGTTCGT TGTTGCAGCT ATCCGGAC-A TCAGTATTCA TCCGGAGTTT 129611 || || || | ||| || | | ||||| | || ||||| | || ||||| |||| ||| CGAATGAACT AAAGGATCTT CGCTGCAGTT ATTCGGACGT TTAGCATTCA ACCGG-CTTT 615 GGTAGGTCCT CATGCTTTCG AGGATGCTAC TGTTTTACAT TCTAGCGTAG TTTTAGAGTT 129671 |||||||||| |||| ||||| |||||||| ||||||| || |||||| ||| |||||||||| GGTAGGTCCT CATGATTTCG AGGATGCTGT TGTTTTATAT TCTAGCTTAG TTTTAGAGTT 675 GAGCTAGCGG AGCATGTTCC ACTAGCGTTT CTTTCCTGTT 129711 || ||| || | |||||||| ||||| |||| | ||||| || GATGTAGTGG ATCATGTTCC ACTAGTGTTT CCTTCCTATT 715 hqPGS_C01HBa0163B20.1+_SGN-E389503- (129375 129711) ******************************************************************************** EST sequence 226 -strand 383 n (File: SGN-E217225-) 1 AATCGTGATC AAGTTATAGA GGGGATGGAT TTAGTTGTGA TGAACCAGGG CGTAGACGGA 61 AGGATATTTG GTATTTGGTA AAGAAAACTC GGGTTCAAGG GAAGATAGGT GCAAGCACAG 121 GTGGACGCTA GAGCTACAGG TTCGTTGTTG CAGCTATCCG GACATCAGTA TTCATCCGGA 181 GTTTGGTAGG TCCTCATGCT TTCGAGGATG CTACCGTTTT ACATTCTAGC GTAGTTTTAG 241 AGTTGAGCTA GCGGAGCATG TTCCACTAGC GTTTCTTTCC TGTTTTGGTT CAAACTTTGT 301 ATTGGCGCTA TTTTGGCCGA TATACAAGTA ATACTTAATG AATTATTTCT TTCAGTTGCT 361 TAAAAAAAAA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 127792 to 130599): Exon 1 129536 129788 ( 253 n); cDNA 109 361 ( 253 n); score: 0.984 PPA cDNA 362 383 MATCH C01HBa0163B20.1+ SGN-E217225- 0.984 253 0.661 C PGS_C01HBa0163B20.1+_SGN-E217225- (129536 129788) Alignment (genomic DNA sequence = upper lines): GTGCAGGCAC AGGTGGACGC TAGAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 129595 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCAAGCAC AGGTGGACGC TAGAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 168 TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACTGTT TTACATTCTA 129655 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACCGTT TTACATTCTA 228 GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 129715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 288 TTCAAACTTT GTATTGGTGC TATTTTGGCC GATATACAAT TAATACTTAA TGAATTATTT 129775 |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| |||||||||| TTCAAACTTT GTATTGGCGC TATTTTGGCC GATATACAAG TAATACTTAA TGAATTATTT 348 CTTTCAGTTG CTT 129788 |||||||||| ||| CTTTCAGTTG CTT 361 hqPGS_C01HBa0163B20.1+_SGN-E217225- (129536 129788) ******************************************************************************** EST sequence 285 -strand 392 n (File: SGN-E222944-) 1 GGCACGAGGA ATCGTGATCA AGTTATAGAG GGAATGAATT TAGTTGTGAT GAACCAGGGC 61 GTAGACGAAA GGATATTTGG TATTTGGTAA AGAAAACTCG GGTTCAAGGG AAGATAGGTG 121 CAAGCACAGG TGGACGCTAA AGCTACAGGT TCGTTGTTGC AGCAATCCGG ACATCAGTAT 181 TCATCCGGAG TTTGGTAGGT CCTCATGCTT TCGAGGATGC TACCGTTTTA CATTCTAGCG 241 TAGTTTTAGA GTTGAGCTAG CGGAGCATGT TCCACTAGCG TTTCTTTCCT GTTTTGGTTC 301 AAACTTTGTA TTGGCGCTAT TTTGGCCGAT ATACAAGTAA TACTTCATGA ATTATTTCTT 361 TCAGTTGCTT AGAAGATAAA AAAAAAAAAA AA Predicted gene structure (within gDNA segment 127702 to 130599): Exon 1 129536 129788 ( 253 n); cDNA 118 370 ( 253 n); score: 0.972 PPA cDNA 376 392 MATCH C01HBa0163B20.1+ SGN-E222944- 0.972 253 0.645 C PGS_C01HBa0163B20.1+_SGN-E222944- (129536 129788) Alignment (genomic DNA sequence = upper lines): GTGCAGGCAC AGGTGGACGC TAGAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 129595 ||||| |||| |||||||||| || ||||||| |||||||||| |||||| ||| |||||||||| GTGCAAGCAC AGGTGGACGC TAAAGCTACA GGTTCGTTGT TGCAGCAATC CGGACATCAG 177 TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACTGTT TTACATTCTA 129655 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACCGTT TTACATTCTA 237 GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 129715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 297 TTCAAACTTT GTATTGGTGC TATTTTGGCC GATATACAAT TAATACTTAA TGAATTATTT 129775 |||||||||| ||||||| || |||||||||| ||||||||| |||||||| | |||||||||| TTCAAACTTT GTATTGGCGC TATTTTGGCC GATATACAAG TAATACTTCA TGAATTATTT 357 CTTTCAGTTG CTT 129788 |||||||||| ||| CTTTCAGTTG CTT 370 hqPGS_C01HBa0163B20.1+_SGN-E222944- (129536 129788) ******************************************************************************** EST sequence 286 -strand 289 n (File: SGN-E223449-) 1 TCAAGGGAAG ATAGGTGCAA GCACAGGTGG ACGCTAAAGC TACAGGTTCG TTGTTGCAGC 61 TATCCGGACA TCAGTATTCA TCCGGAGTTT GGTAGGTCCT CATGCTTTCG AGGATGCTAC 121 CGTTTTACAT TCTAGCGTAG TTTTAGAGTT GAGCTAGCGG AGCATGTTCC ACTAGCGTTT 181 CTTTCCTGTT TTGGTTCAAA CTTTGTATTG GCGCTATTTT GGCCGATATA CAAGTAATAC 241 TTAATGAATT ATTTCTTTCA GTTGCTTAAA AAAAAAAAAA AAAAAAAAA Predicted gene structure (within gDNA segment 128732 to 130599): Exon 1 129536 129788 ( 253 n); cDNA 15 267 ( 253 n); score: 0.980 PPA cDNA 268 289 MATCH C01HBa0163B20.1+ SGN-E223449- 0.980 253 0.875 C PGS_C01HBa0163B20.1+_SGN-E223449- (129536 129788) Alignment (genomic DNA sequence = upper lines): GTGCAGGCAC AGGTGGACGC TAGAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 129595 ||||| |||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| GTGCAAGCAC AGGTGGACGC TAAAGCTACA GGTTCGTTGT TGCAGCTATC CGGACATCAG 74 TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACTGTT TTACATTCTA 129655 |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TATTCATCCG GAGTTTGGTA GGTCCTCATG CTTTCGAGGA TGCTACCGTT TTACATTCTA 134 GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 129715 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTAGTTTT AGAGTTGAGC TAGCGGAGCA TGTTCCACTA GCGTTTCTTT CCTGTTTTGG 194 TTCAAACTTT GTATTGGTGC TATTTTGGCC GATATACAAT TAATACTTAA TGAATTATTT 129775 |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| |||||||||| TTCAAACTTT GTATTGGCGC TATTTTGGCC GATATACAAG TAATACTTAA TGAATTATTT 254 CTTTCAGTTG CTT 129788 |||||||||| ||| CTTTCAGTTG CTT 267 hqPGS_C01HBa0163B20.1+_SGN-E223449- (129536 129788) ******************************************************************************** EST sequence 182 +strand 806 n (File: SGN-E546254+) 1 CGGGCCCCCC TCGAGTTTTT TTTTTTTTTT TTTTATCTCT TAAATGTTAG ATGGTTGATG 61 ATGAACGATT ATGAAATGTT AAGAATATTC AGCAAGTATG ATTAAAGAAT CAAAAAAAAA 121 AATTCAAATT TTTCGCTAAA ATTTATCTAT GTAAAGTAAG AATGACGTAA GTAGGCTTGT 181 CTGCGACCTC TGAGAGGTCA ACGACGCCGG TCTCGTCTGG GGTCTAGATT CCGGTCGTGA 241 CAGAGGTAAC ACCAAACCAT CCGGGGGGAC ATACGAGGGT GTTCTTAATT AATAACTCCA 301 ACGAATCTGG AGTTAGCACA ACCGTTTCCG CCACACGACT GCCATTGTTG TAAAGCTTAA 361 TCCTAGGTGC TACTTTAATT TTCTCTGCTG TAGCGATCGC TGGACTCTGT TTCACGTCCA 421 CCTCGAGAAA AGTTACTGAA GGATATTCGG CGTTCAAGGT ATCCATGATA TAGGACATCC 481 ACGTGCTTTC TGGGTTGGAT AATTCATCAA AATAGACCAC AGATTGACCA GATGCAATCG 541 CAGCCCGGAA CTTGTCAAGA TCTGAAATCA ACTCCACCAT GAAATTACCT TTTCTGCGTG 601 ACTTCCTTAA TTCAGCTCGG GCATGGGATA AATTTTCAGC AACCACTTTG TTACTTGGAA 661 GTTGCTGCCG CAGAAACTCA TAATCGCTCA CAGCATCAGC CCATCTTTCC AGCTTGATAC 721 TTGAGGCAGC TTTTCGATAA AGAGCTTTAG TATATTGTGG CCGGATAAGG AGAGCGCGAA 781 TGCTATCAGC CCGAGATTCT TCCCAC Predicted gene structure (within gDNA segment 128867 to 134102): Exon 1 129783 130003 ( 221 n); cDNA 29 254 ( 226 n); score: 0.880 PPA cDNA 28 15 MATCH C01HBa0163B20.1+ SGN-E546254+ 0.880 221 0.274 C PGS_C01HBa0163B20.1+_SGN-E546254+ (129783 130003) Alignment (genomic DNA sequence = upper lines): TTGCTTATCT CTTAAATGTT AGATGGTTGA TGATGAACGA TTACGAAATG TTAAGAATGT 129842 || |||||| |||||||||| |||||||||| |||||||||| ||| |||||| |||||||| | TTTTTTATCT CTTAAATGTT AGATGGTTGA TGATGAACGA TTATGAAATG TTAAGAATAT 88 TCAGCAAGTA TGATTAAAGA ATC---AAAA AC--TTCAAA TTTTCCGCTA AAATTAATCT 129897 |||||||||| |||||||||| ||| |||| | |||||| |||| ||||| ||||| |||| TCAGCAAGTA TGATTAAAGA ATCAAAAAAA AAAATTCAAA TTTTTCGCTA AAATTTATCT 148 ATGTAAAGTA AGAATGACGT AAGCAGGCTT GTCTGCGACC TCTGAGAGGT CAACGACGCC 129957 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| ATGTAAAGTA AGAATGACGT AAGTAGGCTT GTCTGCGACC TCTGAGAGGT CAACGACGCC 208 GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAAAGTTG GTATCA 130003 |||||||||| |||||||||| |||||||||| |||| || | | || GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAGAGGTA ACACCA 254 hqPGS_C01HBa0163B20.1+_SGN-E546254+ (129783 130003) ******************************************************************************** EST sequence 118 +strand 548 n (File: SGN-E378094+) 1 TTTTTTTTTT TGGATTAGGA GACTAATTCA AGAATTAGTC AAATAACATT AAAATAAATA 61 AATACAAATC TGTTTTATTT ATTTATTTAT TTATTCATTT AAAACGTGAA AGGACAATTA 121 TGCCCTTAAA TACCTATTTA TTCTTATTTA CATAATTCTC TTCTTTTTTT TTGAATCGTT 181 ACAAATTAAC CTATGTAAAG TAAGAATGAC GTAAGTAGGC TTGTTTGCGA CTTCTGAGAG 241 GTCAACGACG CCGGTCTCAT ATGGGGTCTG AATTCCAGGA TCAGAAATAA TGCATAGAGA 301 AACGACCACT TCCTTCCTTA TGAGACGTCA AGATTAGACC AAGTTTTTTT TCCCCTTCAT 361 TCATCAGTGA AACCGTGAAA CCGTAAGGAA ATGTAGCAAG ACCATTAAGT GTTGTCTAAT 421 TTTAGAATCA CCTCTATACA TAAATTATAA TCCGATTCTC ACCGTTGAAT AAACAATCAA 481 AATGGAGTGA GTTTGACTAC TCTTTATTTC AATCAAGTCT AGTGAATGGA TATTAGACTC 541 GGGGAGCT Predicted gene structure (within gDNA segment 127396 to 133473): Exon 1 129888 129993 ( 106 n); cDNA 183 287 ( 105 n); score: 0.868 Intron 1 129994 130065 ( 72 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.62) Exon 2 130066 130112 ( 47 n); cDNA 288 334 ( 47 n); score: 0.617 PPA cDNA 11 1 MATCH C01HBa0163B20.1+ SGN-E378094+ 0.868 153 0.279 C PGS_C01HBa0163B20.1+_SGN-E378094+ (129888 129993,130066 130112) Alignment (genomic DNA sequence = upper lines): AAATTAATCT ATGTAAAGTA AGAATGACGT AAGCAGGCTT GTCTGCGACC TCTGAGAGGT 129947 ||||||| || |||||||||| |||||||||| ||| |||||| || |||||| |||||||||| AAATTAACCT ATGTAAAGTA AGAATGACGT AAGTAGGCTT GTTTGCGACT TCTGAGAGGT 242 CAACGACGCC GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAAAGTTG GTATCAGAGC 130007 |||||||||| |||||| | | ||||||| | |||| | | | ||| CAACGACGCC GGTCTCATAT GGGGTCTGAA TTCCAG-GAT CAGAAA.... .......... 287 GCTAGGTTAA ATTCCTCGAA TAATGAGTTC ACATCAACCA CATTGAGTAG TTTCTAAGTC 130067 | .......... .......... .......... .......... .......... ........TA 289 ATG-GTAGTG AAGTGCACCA CTATCCTGGA TTA-GAGACT GCATGAT 130112 ||| ||| | || | |||| || |||| ||| ||||| || ||| ATGCATAGAG AAACG-ACCA CT-TCCTTCC TTATGAGACG TCAAGAT 334 hqPGS_C01HBa0163B20.1+_SGN-E378094+ (129888 129993) ******************************************************************************** EST sequence 149 +strand 598 n (File: SGN-E227035+) 1 TTTTTTTTTT TGGATTAGGA GACTAATTCA AGAATTAGTC AAATAACATT AAAATAAATA 61 AATACAAATC TGTTTTATTT ATTTATTTAT TTATTCATTT AAAACGTGAA AGGACAATTA 121 TGCCCTTAAA TACCTATTTA TTCTTATTTA CATAATTCTC TTCTTTTTTT TTGAATCGTT 181 ACAAATTAAC CTATGTAAAG TAAGAATGAC GTAAGTAGGC TTGTTTGCGA CTTCTGAGAG 241 GTCAACGACG CCGGTCTCAT ATGGGGTCTG AATTCCAGGA TCAGAAATAA TGCATAGAGA 301 AACGACCACT TCCTTCCTTA TGAGACGTCA AGATTAGACC AAGTTTTTTT TCCCCTTCAT 361 TCATCAGTGA AACCGTGAAA CCGTAAGGAA ATGTAGCAAG ACCATTAAGT GTTGTCTAAT 421 TTTAGAATCA CCTCTATACA TAAATTATAA TCCGATTCTC ACCGTTGAAT AAACAATCAA 481 AATGGAGTGA GTTTGACTAC TCTTTATTTC AATCAAGTCT AGTGAATGGA TATTAGACTC 541 GGGAGCTTCA GAACATTTAT CTTCTAATCC TGAGCTTTTC ACTTACCTTA CTCCTTTT Predicted gene structure (within gDNA segment 127396 to 133973): Exon 1 129888 129993 ( 106 n); cDNA 183 287 ( 105 n); score: 0.868 Intron 1 129994 130065 ( 72 n); Pd: 0.000 (s: 0.80), Pa: 0.000 (s: 0.62) Exon 2 130066 130112 ( 47 n); cDNA 288 334 ( 47 n); score: 0.617 PPA cDNA 11 1 MATCH C01HBa0163B20.1+ SGN-E227035+ 0.868 153 0.256 C PGS_C01HBa0163B20.1+_SGN-E227035+ (129888 129993,130066 130112) Alignment (genomic DNA sequence = upper lines): AAATTAATCT ATGTAAAGTA AGAATGACGT AAGCAGGCTT GTCTGCGACC TCTGAGAGGT 129947 ||||||| || |||||||||| |||||||||| ||| |||||| || |||||| |||||||||| AAATTAACCT ATGTAAAGTA AGAATGACGT AAGTAGGCTT GTTTGCGACT TCTGAGAGGT 242 CAACGACGCC GGTCTCGTCT GGGGTCTAGA TTCCGGTCGT GACAAAGTTG GTATCAGAGC 130007 |||||||||| |||||| | | ||||||| | |||| | | | ||| CAACGACGCC GGTCTCATAT GGGGTCTGAA TTCCAG-GAT CAGAAA.... .......... 287 GCTAGGTTAA ATTCCTCGAA TAATGAGTTC ACATCAACCA CATTGAGTAG TTTCTAAGTC 130067 | .......... .......... .......... .......... .......... ........TA 289 ATG-GTAGTG AAGTGCACCA CTATCCTGGA TTA-GAGACT GCATGAT 130112 ||| ||| | || | |||| || |||| ||| ||||| || ||| ATGCATAGAG AAACG-ACCA CT-TCCTTCC TTATGAGACG TCAAGAT 334 hqPGS_C01HBa0163B20.1+_SGN-E227035+ (129888 129993) Total number of EST alignments reported: 283 ________________________________________________________________________________ Predicted gene locations (20) in segment 1 to 134102: PGL 1 (- strand): 4273 4063 AGS-1 (4273 4063) SCR (e 0.893) Exon 1 4273 4063 ( 211 n); score: 0.893 PGS (4273 4063) SGN-E578078+ 3-phase translation of AGS-1 (-strand): . . . . . . 4273 CACGCCTTGTGGCACAAGAATTTTCTCAAAGGCCTGGCGTCGACTATGAAGAGACATACT H A L W H K N F L K G L A S T M K R H T T P C G T R I F S K A W R R L - R D I L R L V A Q E F S Q R P G V D Y E E T Y . . . . . . 4213 CACCCGTTTTGGATGCAATAATATTGCATTATCTCATTAGTTTCACAGTCCATGAGCAAC H P F W M Q - Y C I I S L V S Q S M S N T R F G C N N I A L S H - F H S P - A T S P V L D A I I L H Y L I S F T V H E Q . . . . . . 4153 TTGAAATGCATTTGATGGATGTGGTTATAGCCTACCTTTATGGATCACTTGATAATGAGA L K C I - W M W L - P T F M D H L I M R - N A F D G C G Y S L P L W I T - - - D L E M H L M D V V I A Y L Y G S L D N E . . . . 4093 TATACATGAAAATTCTTGAAGGATTTGCGAT Y T - K F L K D L R I H E N S - R I C D I Y M K I L E G F A Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-1_AGS-1_PPS_1 (4271 4065) (frame '0'; 207 bp, 69 residues) 1 RLVAQEFSQR PGVDYEETYS PVLDAIILHY LISFTVHEQL EMHLMDVVIA YLYGSLDNEI 61 YMKILEGFA 3-phase translation of AGS-1 (+strand): . . . . . . 4063 ATCGCAAATCCTTCAAGAATTTTCATGTATATCTCATTATCAAGTGATCCATAAAGGTAG I A N P S R I F M Y I S L S S D P - R - S Q I L Q E F S C I S H Y Q V I H K G R R K S F K N F H V Y L I I K - S I K V . . . . . . 4123 GCTATAACCACATCCATCAAATGCATTTCAAGTTGCTCATGGACTGTGAAACTAATGAGA A I T T S I K C I S S C S W T V K L M R L - P H P S N A F Q V A H G L - N - - D G Y N H I H Q M H F K L L M D C E T N E . . . . . . 4183 TAATGCAATATTATTGCATCCAAAACGGGTGAGTATGTCTCTTCATAGTCGACGCCAGGC - C N I I A S K T G E Y V S S - S T P G N A I L L H P K R V S M S L H S R R Q A I M Q Y Y C I Q N G - V C L F I V D A R . . . . 4243 CTTTGAGAAAATTCTTGTGCCACAAGGCGTG L - E N S C A T R R F E K I L V P Q G V P L R K F L C H K A Maximal non-overlapping open reading frames (>= 64 codons): none PGL 2 (+ strand): 9569 11035 AGS-1 (9569 10217) SCR (e 0.983) Exon 1 9569 10217 ( 649 n); score: 0.983 PGS (9569 10217) SGN-E539761+ PGS (9570 9954) SGN-E284788+ 3-phase translation of AGS-1 (+strand): . . . . . . 9569 TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAG Y V R N W E S - Q T G G V S S H S E R E T S E T G S L D K Q V E F Q V I Q N E R R Q K L G V L T N R W S F K S F R T R . . . . . . 9629 AGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGA R F K G T - R G G S R A T D R N - Y S R D L K E P E E E D Q E P Q T E T D I P E E I - R N L K R R I K S H R Q K L I F Q . . . . . . 9689 ATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGT I Y A I R Y P S E Y S S R S A K E G W S S M P S D I H Q S I A Q D R P R R V G V N L C H Q I S I R V - L K I G Q G G L E . . . . . . 9749 TCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGA S A T Y E V W F - G H G G L C T A G C - R P P T R Y G F E D M V G Y A L Q V A E F G H L R G M V L R T W W V M H C R L L . . . . . . 9809 AGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGA R G R Y I - A V Y L Q R S H F K F - F - E V D T S E P S T Y K E A I L S S D S E K R - I H L S R L L T K K P F - V L I L . . . . . . 9869 AAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGA K M V C R Y G R - D G V P T Q E S D M G K W F A A M G D E M E S L H K N Q T W D K N G L P L W E M R W S P Y T R I R H G . . . . . . 9929 TCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAA S G H T A F G E K D Y Y L Q M G F Q E E L V I Q P S G R K I I T C K W V F K K K I W S Y S L R G E R L L L A N G F S R R . . . . . . 9989 GGAAGGGATATCACCACCAGAAGGAGTCAAGTATAAAGCTAGGGTTGTTGCCAGAGGTTT G R D I T T R R S Q V - S - G C C Q R F E G I S P P E G V K Y K A R V V A R G F R K G Y H H Q K E S S I K L G L L P E V . . . . . . 10049 CAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTC Q P K R G S G L Q - D L L T S G Q T Y F N Q R E G V D Y N E I F S P V V R H T S S T K E R E W T T M R S S H Q W S D I L . . . . . . 10109 CATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGT H P S V T S D S C T S E S G A - T T - C I R V L L A I V A H Q N L E L E Q L D V P S E C Y - R - L H I R I W S L N N L M . . . . . 10169 GAAGACAGTGTTTCTATATGGAGAGTTGGAGGAAGAGATATACATGACT E D S V S I W R V G G R D I H D K T V F L Y G E L E E E I Y M T - R Q C F Y M E S W R K R Y T - Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-2_AGS-1_PPS_1 (9570 10217) (frame '2'; 648 bp, 216 residues) 1 TSETGSLDKQ VEFQVIQNER DLKEPEEEDQ EPQTETDIPE SMPSDIHQSI AQDRPRRVGV 61 RPPTRYGFED MVGYALQVAE EVDTSEPSTY KEAILSSDSE KWFAAMGDEM ESLHKNQTWD 121 LVIQPSGRKI ITCKWVFKKK EGISPPEGVK YKARVVARGF NQREGVDYNE IFSPVVRHTS 181 IRVLLAIVAH QNLELEQLDV KTVFLYGELE EEIYMT 3-phase translation of AGS-1 (-strand): . . . . . . 10217 AGTCATGTATATCTCTTCCTCCAACTCTCCATATAGAAACACTGTCTTCACATCAAGTTG S H V Y L F L Q L S I - K H C L H I K L V M Y I S S S N S P Y R N T V F T S S C S C I S L P P T L H I E T L S S H Q V . . . . . . 10157 TTCAAGCTCCAGATTCTGATGTGCAACTATCGCTAGTAACACTCGGATGGAAGTATGTCT F K L Q I L M C N Y R - - H S D G S M S S S S R F - C A T I A S N T R M E V C L V Q A P D S D V Q L S L V T L G W K Y V . . . . . . 10097 GACCACTGGTGAGAAGATCTCATTGTAGTCCACTCCCTCTCTTTGGTTGAAACCTCTGGC D H W - E D L I V V H S L S L V E T S G T T G E K I S L - S T P S L W L K P L A - P L V R R S H C S P L P L F G - N L W . . . . . . 10037 AACAACCCTAGCTTTATACTTGACTCCTTCTGGTGGTGATATCCCTTCCTTCTTCTTGAA N N P S F I L D S F W W - Y P F L L L E T T L A L Y L T P S G G D I P S F F L K Q Q P - L Y T - L L L V V I S L P S S - . . . . . . 9977 AACCCATTTGCAAGTAATAATCTTTCTCCCCGAAGGCTGTATGACCAGATCCCATGTCTG N P F A S N N L S P R R L Y D Q I P C L T H L Q V I I F L P E G C M T R S H V - K P I C K - - S F S P K A V - P D P M S . . . . . . 9917 ATTCTTGTGTAGGGACTCCATCTCATCTCCCATAGCGGCAAACCATTTTTCAGAATCAGA I L V - G L H L I S H S G K P F F R I R F L C R D S I S S P I A A N H F S E S E D S C V G T P S H L P - R Q T I F Q N Q . . . . . . 9857 ACTTAAAATGGCTTCTTTGTAAGTAGACGGCTCAGATGTATCTACCTCTTCAGCAACCTG T - N G F F V S R R L R C I Y L F S N L L K M A S L - V D G S D V S T S S A T C N L K W L L C K - T A Q M Y L P L Q Q P . . . . . . 9797 CAGTGCATAACCCACCATGTCCTCAAAACCATACCTCGTAGGTGGCCGAACTCCAACCCT Q C I T H H V L K T I P R R W P N S N P S A - P T M S S K P Y L V G G R T P T L A V H N P P C P Q N H T S - V A E L Q P . . . . . . 9737 CCTTGGCCGATCTTGAGCTATACTCTGATGGATATCTGATGGCATAGATTCTGGAATATC P W P I L S Y T L M D I - W H R F W N I L G R S - A I L - W I S D G I D S G I S S L A D L E L Y S D G Y L M A - I L E Y . . . . . . 9677 AGTTTCTGTCTGTGGCTCTTGATCCTCCTCTTCAGGTTCCTTTAAATCTCTCTCGTTCTG S F C L W L L I L L F R F L - I S L V L V S V C G S - S S S S G S F K S L S F - Q F L S V A L D P P L Q V P L N L S R S . . . . . 9617 AATGACTTGAAACTCCACCTGTTTGTCAAGACTCCCAGTTTCTGACGTA N D L K L H L F V K T P S F - R M T - N S T C L S R L P V S D V E - L E T P P V C Q D S Q F L T Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (10228 11035) SCR (e 0.990) Exon 1 10228 11035 ( 808 n); score: 0.990 PGS (10228 11035) SGN-E343338+ 3-phase translation of AGS-2 (+strand): . . . . . . 10228 GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGAC V S K F Q G R K I T S A S - R S P Y M D F P S S R E G K S R L Q V E E V L I W T F Q V P G K E N H V C K L K K S L Y G . . . . . . 10288 TTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCT L S S L Q G S G I K G L T A I W - S W A - A V S K A V V - K V - Q L Y G E V G L L K Q S P R Q W Y K R F D S Y M V K L G . . . . . . 10348 ATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCA I L G A H M I V V S T T I G S M M I H S Y S E L I - L L C L L Q - A Q - - F I H Y T R S S Y D C C V Y Y N R L N D D S F . . . . . . 10408 TCTATCTGGTGCTTTATGTAGATGATATGTTAATAGCTGCAAAGAAGAAGTATGACATTC S I W C F M - M I C - - L Q R R S M T F L S G A L C R - Y V N S C K E E V - H S I Y L V L Y V D D M L I A A K K K Y D I . . . . . . 10468 AGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGA R S - R V Y L V L S L R - R I W E P L G E A E G F T - C - V - D E G S G S R S E Q K L K G L L S A E F E M K D L G A A R . . . . . . 10528 AGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGA R F - G W R S L E T E R E G N F S C H R D F R D G D H - R Q R E K E T F L V T E K I L G M E I I R D R E R R K L F L S Q . . . . . . 10588 GAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATA E A T F R R S W R G L A C L H L S P L I K L H S E G L G E V W H V F I - A H - Y R S Y I Q K V L A R F G M S S S K P I D . . . . . . 10648 CCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGGAGAAGAGA P P V L P I S I S L P C S L H S Q E K R P Q C C Q Y P S H C H V R S T V R R R E T P S A A N I H L T A M F A P Q S G E E . . . . . . 10708 AGGAGTATATGTCACGAGTCCCCTATGCCAGTGCCGTAGGAAGTTTAATGTATGCTATGG R S I C H E S P M P V P - E V - C M L W G V Y V T S P L C Q C R R K F N V C Y G K E Y M S R V P Y A S A V G S L M Y A M . . . . . . 10768 TCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGAGAGCAGATTCATGGGACAAC S V Q G Q I - H M Q S V - R A D S W D N L Y K A R F S T C S Q C R E Q I H G T T V C T R P D L A H A V S V E S R F M G Q . . . . . . 10828 CAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTG Q G E N I G R L - R E F S G T L E V H L R E R T L A G C E E N F P V P - R Y I - P G R E H W Q A V K R I F R Y L R G T S . . . . . . 10888 ACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTAGTTACTGGCTATTCTGATTCAG T L V S F M E V I L S A - L L A I L I Q R W S H L W R - Y S V L S Y W L F - F R D V G L I Y G G D T Q C L V T G Y S D S . . . . . . 10948 ACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAG T M L E M L T Q E D R - L A M C L P L E L C W R C - H K K I D D W L C V Y P W R D Y A G D V D T R R S M T G Y V F T L G . . . 11008 GATCTGTCGTCAGTTGGAAGGCAACTTT D L S S V G R Q L I C R Q L E G N F G S V V S W K A T Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-2_AGS-2_PPS_1 (10230 11033) (frame '0'; 804 bp, 268 residues) 1 FQVPGKENHV CKLKKSLYGL KQSPRQWYKR FDSYMVKLGY TRSSYDCCVY YNRLNDDSFI 61 YLVLYVDDML IAAKKKYDIQ KLKGLLSAEF EMKDLGAARK ILGMEIIRDR ERRKLFLSQR 121 SYIQKVLARF GMSSSKPIDT PSAANIHLTA MFAPQSGEEK EYMSRVPYAS AVGSLMYAMV 181 CTRPDLAHAV SVESRFMGQP GREHWQAVKR IFRYLRGTSD VGLIYGGDTQ CLVTGYSDSD 241 YAGDVDTRRS MTGYVFTLGG SVVSWKAT 3-phase translation of AGS-2 (-strand): . . . . . . 11035 AAAGTTGCCTTCCAACTGACGACAGATCCTCCAAGGGTAAACACATAGCCAGTCATCGAT K V A F Q L T T D P P R V N T - P V I D K L P S N - R Q I L Q G - T H S Q S S I S C L P T D D R S S K G K H I A S H R . . . . . . 10975 CTTCTTGTGTCAACATCTCCAGCATAGTCTGAATCAGAATAGCCAGTAACTAAGCACTGA L L V S T S P A - S E S E - P V T K H - F L C Q H L Q H S L N Q N S Q - L S T E S S C V N I S S I V - I R I A S N - A L . . . . . . 10915 GTATCACCTCCATAAATGAGACCAACGTCAGATGTACCTCTAAGGTACCGGAAAATTCTC V S P P - M R P T S D V P L R Y R K I L Y H L H K - D Q R Q M Y L - G T G K F S S I T S I N E T N V R C T S K V P E N S . . . . . . 10855 TTCACAGCCTGCCAATGTTCTCTCCCTGGTTGTCCCATGAATCTGCTCTCTACACTGACT F T A C Q C S L P G C P M N L L S T L T S Q P A N V L S L V V P - I C S L H - L L H S L P M F S P W L S H E S A L Y T D . . . . . . 10795 GCATGTGCTAAATCTGGCCTTGTACAGACCATAGCATACATTAAACTTCCTACGGCACTG A C A K S G L V Q T I A Y I K L P T A L H V L N L A L Y R P - H T L N F L R H W C M C - I W P C T D H S I H - T S Y G T . . . . . . 10735 GCATAGGGGACTCGTGACATATACTCCTTCTCTTCTCCTGACTGTGGAGCGAACATGGCA A - G T R D I Y S F S S P D C G A N M A H R G L V T Y T P S L L L T V E R T W Q G I G D S - H I L L L F S - L W S E H G . . . . . . 10675 GTGAGATGGATATTGGCAGCACTGGGGGTATCAATGGGCTTAGATGAAGACATGCCAAAC V R W I L A A L G V S M G L D E D M P N - D G Y W Q H W G Y Q W A - M K T C Q T S E M D I G S T G G I N G L R - R H A K . . . . . . 10615 CTCGCCAAGACCTTCTGAATGTAGCTTCTCTGTGACAAGAAAAGTTTCCTTCTCTCTCTG L A K T F - M - L L C D K K S F L L S L S P R P S E C S F S V T R K V S F S L C P R Q D L L N V A S L - Q E K F P S L S . . . . . . 10555 TCTCTAATGATCTCCATCCCTAAAATCTTCCGAGCGGCTCCCAGATCCTTCATCTCAAAC S L M I S I P K I F R A A P R S F I S N L - - S P S L K S S E R L P D P S S Q T V S N D L H P - N L P S G S Q I L H L K . . . . . . 10495 TCAGCACTAAGTAAACCCTTCAGCTTCTGAATGTCATACTTCTTCTTTGCAGCTATTAAC S A L S K P F S F - M S Y F F F A A I N Q H - V N P S A S E C H T S S L Q L L T L S T K - T L Q L L N V I L L L C S Y - . . . . . . 10435 ATATCATCTACATAAAGCACCAGATAGATGAATGAATCATCATTGAGCCTATTGTAGTAG I S S T - S T R - M N E S S L S L L - - Y H L H K A P D R - M N H H - A Y C S R H I I Y I K H Q I D E - I I I E P I V V . . . . . . 10375 ACACAACAATCATATGAGCTCCGAGTATAGCCCAACTTCACCATATAGCTGTCAAACCTT T Q Q S Y E L R V - P N F T I - L S N L H N N H M S S E Y S P T S P Y S C Q T F D T T I I - A P S I A Q L H H I A V K P . . . . . . 10315 TTATACCACTGCCTTGGAGACTGCTTAAGTCCATATAAGGACTTCTTCAACTTGCAGACG L Y H C L G D C L S P Y K D F F N L Q T Y T T A L E T A - V H I R T S S T C R R F I P L P W R L L K S I - G L L Q L A D . . . 10255 TGATTTTCCTTCCCTGGAACTTGGAAAC - F S F P G T W K D F P S L E L G N V I F L P W N L E Maximal non-overlapping open reading frames (>= 64 codons): none PGL 3 (- strand): 14464 11682 AGS-1 (13378 13335,11897 11682) SCR (e 0.727 d 0.000 a 0.000,e 0.921) Exon 1 13378 13335 ( 44 n); score: 0.727 Intron 1 13334 11898 (1437 n); Pd: 0.000 Pa: 0.000 Exon 2 11897 11682 ( 216 n); score: 0.921 PGS (13378 13335,11897 11682) SGN-E301078- PGS (13378 13335,11897 11682) SGN-E301194- 3-phase translation of AGS-1 (-strand): . . . . . : . 13378 TTGATTTGATATATTTAGAAGCTTGTTGAATATGATATCACGAT : AAATATTTAATATTAT L I - Y I - K L V E Y D I T I : N I - Y Y - F D I F R S L L N M I S R : - I F N I I D L I Y L E A C - I - Y H D : K Y L I L . . . . . . 11881 TGTCTGTTGTGCGGAATTTGAGATAATACGAGAAAATATAAACGCGAAAAACAAGACAAC C L L C G I - D N T R K Y K R E K Q D N V C C A E F E I I R E N I N A K N K T T L S V V R N L R - Y E K I - T R K T R Q . . . . . . 11821 AGATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGAGGGAGCAGTTTTA R F T W F T N K L A T S T G R E G A V L D L R G S P I N W L R P R E E R E Q F Y Q I Y V V H Q - I G Y V H G K R G S S F . . . . . . 11761 TTATGGAGAGGCAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTG L W R G K N R I T E - G F P - R L Y I V Y G E A K T E L Q N R V S H S V Y I - C I M E R Q K Q N Y R I G F P I A S I Y S . . 11701 CTAAGCTACGCCCTAACAGG L S Y A L T - A T P - Q A K L R P N R Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (11990 11878) SCR (e 0.788) Exon 1 11990 11878 ( 113 n); score: 0.788 PGS (11990 11878) SGN-E219208- PGS (11990 11878) SGN-E219032- 3-phase translation of AGS-2 (-strand): . . . . . . 11990 TTTAATAAATATTACTTACTTGGCTAAATATTAAAGGAAATTAAAATTAGATTATGTATT F N K Y Y L L G - I L K E I K I R L C I L I N I T Y L A K Y - R K L K L D Y V F - - I L L T W L N I K G N - N - I M Y . . . . . . 11930 TTAATTGTCTAAATCAATGTAAAATCAAAGAAGAAATATTTAATATTATTGTC L I V - I N V K S K K K Y L I L L - L S K S M - N Q R R N I - Y Y C F N C L N Q C K I K E E I F N I I V Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (+strand): . . . . . . 11878 GACAATAATATTAAATATTTCTTCTTTGATTTTACATTGATTTAGACAATTAAAATACAT D N N I K Y F F F D F T L I - T I K I H T I I L N I S S L I L H - F R Q L K Y I Q - Y - I F L L - F Y I D L D N - N T . . . . . . 11938 AATCTAATTTTAATTTCCTTTAATATTTAGCCAAGTAAGTAATATTTATTAAA N L I L I S F N I - P S K - Y L L I - F - F P L I F S Q V S N I Y - - S N F N F L - Y L A K - V I F I K Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (14464 14332,14173 13446) SCR (e 1.000 d 1.000 a 0.980,e 0.999) Exon 1 14464 14332 ( 133 n); score: 1.000 Intron 1 14331 14174 ( 158 n); Pd: 1.000 Pa: 0.980 Exon 2 14173 13446 ( 728 n); score: 0.999 PGS (14355 14332,14173 13446) SGN-E548589- PGS (14464 14332,14173 13467) SGN-E541683+ PGS (13855 13492) SGN-E218860- PGS (14173 13523) SGN-E228492+ PGS (14173 13874) SGN-E242504+ PGS (14173 13882) SGN-E244559+ PGS (14463 14332,14173 13975) SGN-E298606+ 3-phase translation of AGS-3 (-strand): . . . . . . 14464 TAAAAATACCATTCCCTAATATTCATCCACCATTTTCCCTTAGAAAATGTCAAACAAATC - K Y H S L I F I H H F P L E N V K Q I K N T I P - Y S S T I F P - K M S N K S K I P F P N I H P P F S L R K C Q T N . . . . . . 14404 CCCCATTTTTCCTATTGTTGAACCTCAACACTTCAGTGACTATGGCTTCGACCCTCAAAT P H F S Y C - T S T L Q - L W L R P S N P I F P I V E P Q H F S D Y G F D P Q I P P F F L L L N L N T S V T M A S T L K . . : . . . . 14344 CCATTATTTTCAG : ATTTTGGAAGAAGCAAGAAAACACAAAATCAGAGAAACTGCGAGGTC P L F S : D F G R S K K T Q N Q R N C E V H Y F Q : I L E E A R K H K I R E T A R S S I I F R : F W K K Q E N T K S E K L R G . . . . . . 14126 ATCCATAGATACACTTCACTTCAAGCTACAGAAACCCATTTCAAAAGATGAATCATCGAA I H R Y T S L Q A T E T H F K R - I I E S I D T L H F K L Q K P I S K D E S S K H P - I H F T S S Y R N P F Q K M N H R . . . . . . 14066 GAAGATAAAAAAGAACAGTAGCCGTAAAAGATGGTGGAAAAATGCTCTGCTTTTCTTCAA E D K K E Q - P - K M V E K C S A F L Q K I K K N S S R K R W W K N A L L F F K R R - K R T V A V K D G G K M L C F S S . . . . . . 14006 AAAGACCAAATCCAACAATGAAAAATTCTACGGCGCCGACGGTGAAGTTCATCACCGGCG K D Q I Q Q - K I L R R R R - S S S P A K T K S N N E K F Y G A D G E V H H R R K R P N P T M K N S T A P T V K F I T G . . . . . . 13946 ACCTAATTTTCAAGGATCGATTTCTGGGCCGGTATACATTACTGAGAGCAGAAGTGGGTC T - F S R I D F W A G I H Y - E Q K W V P N F Q G S I S G P V Y I T E S R S G S D L I F K D R F L G R Y T L L R A E V G . . . . . . 13886 GAACACGCCTTACCGTACAACAAGCCGGCCGTCCTCCGGTCCACTCGCCGGAACTTTAAC E H A L P Y N K P A V L R S T R R N F N N T P Y R T T S R P S S G P L A G T L T R T R L T V Q Q A G R P P V H S P E L - . . . . . . 13826 TCCTAACCGGAAAGGTGATTTGGAGATCCCCTACATTAACCTCAGGGAGTTTAACATGGA S - P E R - F G D P L H - P Q G V - H G P N R K G D L E I P Y I N L R E F N M D L L T G K V I W R S P T L T S G S L T W . . . . . . 13766 CCAGCAGCAGCAGCATAAGATCTGTACAGCCTCGCCTATGCCAATATATTTGGTCACGTG P A A A A - D L Y S L A Y A N I F G H V Q Q Q Q H K I C T A S P M P I Y L V T - T S S S S I R S V Q P R L C Q Y I W S R . . . . . . 13706 AACAGAGCAGTATTTAATTAATTAAATTGATAATTTTAAGTGTTACTGCTAATTAATTAC N R A V F N - L N - - F - V L L L I N Y T E Q Y L I N - I D N F K C Y C - L I T E Q S S I - L I K L I I L S V T A N - L . . . . . . 13646 TCTTATTATCCTAATTTAGACCTTTTTAGGGTTTCAAATTACTTGAAAGTTGATGACCCA S Y Y P N L D L F R V S N Y L K V D D P L I I L I - T F L G F Q I T - K L M T H L L L S - F R P F - G F K L L E S - - P . . . . . . 13586 TGGGTATCCTCTTTTAGTTCTTTGAATTATGTGCAACTTTCTTTTATGTAAAAGTGCTTT W V S S F S S L N Y V Q L S F M - K C F G Y P L L V L - I M C N F L L C K S A L M G I L F - F F E L C A T F F Y V K V L . . . . . . 13526 AATATTGATGGCATGTAACAACTTTTTTCTTGTAAATTGTCAGCAGACAGTATGGATTTT N I D G M - Q L F S C K L S A D S M D F I L M A C N N F F L V N C Q Q T V W I F - Y - W H V T T F F L - I V S R Q Y G F . . . 13466 CTTGCAGCCTATTGTAATGAA L A A Y C N E L Q P I V M S C S L L - - Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-3_AGS-3_PPS_1 (14421 14332,14173 13706) (frame '2'; 555 bp, 185 residues) 1 KMSNKSPIFP IVEPQHFSDY GFDPQIHYFQ ILEEARKHKI RETARSSIDT LHFKLQKPIS 61 KDESSKKIKK NSSRKRWWKN ALLFFKKTKS NNEKFYGADG EVHHRRPNFQ GSISGPVYIT 121 ESRSGSNTPY RTTSRPSSGP LAGTLTPNRK GDLEIPYINL REFNMDQQQQ HKICTASPMP 181 IYLVT- PGL 4 (+ strand): 36352 37700 AGS-1 (36352 37700) SCR (e 0.996) Exon 1 36352 37700 (1349 n); score: 0.996 PGS (36352 36906) SGN-E347325+ PGS (36358 36902) SGN-E315555+ PGS (36483 37014) SGN-E276234+ PGS (36515 37145) SGN-E306864+ PGS (36519 37177) SGN-E327140+ PGS (36743 37401) SGN-E303553+ PGS (36745 37422) SGN-E371657+ PGS (36745 37082) SGN-E280286+ PGS (36801 37388) SGN-E338632+ PGS (36843 37163) SGN-E247205+ PGS (36952 37700) SGN-E371656- PGS (37153 37680) SGN-E290438- 3-phase translation of AGS-1 (+strand): . . . . . . 36352 TCAAGAACTTTCCTCCTTCTCTCTTCTTCCTTCAACTTGCCCATTTCCCCATCCATATAT S R T F L L L S S S F N L P I S P S I Y Q E L S S F S L L P S T C P F P H P Y I K N F P P S L F F L Q L A H F P I H I . . . . . . 36412 ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I Y I . . . . . . 36472 CTTCTACAATAATTTTGCTATATTTACAATTACAGATAGTCCATCTCATTGGCAGTATTT L L Q - F C Y I Y N Y R - S I S L A V F F Y N N F A I F T I T D S P S H W Q Y L S S T I I L L Y L Q L Q I V H L I G S I . . . . . . 36532 ACCATGAATAACGATACCCCAAGCATGATTCATGATCCATTGATTGATTCCACAGGAGAT T M N N D T P S M I H D P L I D S T G D P - I T I P Q A - F M I H - L I P Q E M Y H E - R Y P K H D S - S I D - F H R R . . . . . . 36592 GGAGGCTATGCATTGAGTGGAAAAATTATGCTAAGTGCTATTGTTATCTTATTCACTGTT G G Y A L S G K I M L S A I V I L F T V E A M H - V E K L C - V L L L S Y S L L W R L C I E W K N Y A K C Y C Y L I H C . . . . . . 36652 GTTGTTTTCATGGTGGGTCTTCATTTATATGCTCGTTGGTACCTTGTGTCTCAGCGCCGC V V F M V G L H L Y A R W Y L V S Q R R L F S W W V F I Y M L V G T L C L S A A C C F H G G S S F I C S L V P C V S A P . . . . . . 36712 CGTGAACTCCTTCGCCGCCGTAGGGTCAACCATCGACGGACTCATATTGTTTTCTACGTT R E L L R R R R V N H R R T H I V F Y V V N S F A A V G S T I D G L I L F S T L P - T P S P P - G Q P S T D S Y C F L R . . . . . . 36772 GATAATCCTGGTTCCGGTTTGTCTGATGCTAACCGGGGTTTGGAACAGGCGGTTCTCAGT D N P G S G L S D A N R G L E Q A V L S I I L V P V C L M L T G V W N R R F S V - - S W F R F V - C - P G F G T G G S Q . . . . . . 36832 TCCTTGCCGGTTTTTGTTTATTCCGACAAGACTCACCCGGAACCGCTGGAATGTGCTGTT S L P V F V Y S D K T H P E P L E C A V P C R F L F I P T R L T R N R W N V L F F L A G F C L F R Q D S P G T A G M C C . . . . . . 36892 TGTTTATCGGAATTTGAGGAGAATGAAAAGGGTCGGGTTTTACCCAAGTGTAATCACTCT C L S E F E E N E K G R V L P K C N H S V Y R N L R R M K R V G F Y P S V I T L L F I G I - G E - K G S G F T Q V - S L . . . . . . 36952 TTTCATTCGGAATGTATTGATATGTGGTTTCATTCTCATTCTACGTGCCCTCTTTGTCGC F H S E C I D M W F H S H S T C P L C R F I R N V L I C G F I L I L R A L F V A F S F G M Y - Y V V S F S F Y V P S L S . . . . . . 37012 TCTCCGGTGGAGGCAGTACTTATCGGACCGGATATTAACCGGGTTGAGGTGGCGGTAACA S P V E A V L I G P D I N R V E V A V T L R W R Q Y L S D R I L T G L R W R - Q L S G G G S T Y R T G Y - P G - G G G N . . . . . . 37072 GTGAACGAACCGGGTTCGAGTTCGGGTTGTGAGGAGAATAGTAGTCATCATTCTAATATG V N E P G S S S G C E E N S S H H S N M - T N R V R V R V V R R I V V I I L I - S E R T G F E F G L - G E - - S S F - Y . . . . . . 37132 ACGCCGTTGGGTTGCCGGCGAAAAGGATTGGATCTGACCGGAGTAAGAATAGAGGTACCA T P L G C R R K G L D L T G V R I E V P R R W V A G E K D W I - P E - E - R Y Q D A V G L P A K R I G S D R S K N R G T . . . . . . 37192 AGAAGGAACGATTTCGAAGCCGATTTGGAAATGGGAGTGAGAGTAAGTTCACCGGCGATT R R N D F E A D L E M G V R V S S P A I E G T I S K P I W K W E - E - V H R R F K K E R F R S R F G N G S E S K F T G D . . . . . . 37252 CAATCGAGATCACCAGCGACTCGTTTAATGTCTTTGAGAAGAATCCTAAGTATGAACAGA Q S R S P A T R L M S L R R I L S M N R N R D H Q R L V - C L - E E S - V - T E S I E I T S D S F N V F E K N P K Y E Q . . . . . . 37312 AAAACACCCACCGGAACTAGCCATTCTCCTAGTGGAAGTTGCGCCGCGGATTTTGATATA K T P T G T S H S P S G S C A A D F D I K H P P E L A I L L V E V A P R I L I - K N T H R N - P F S - W K L R R G F - Y . . . . . . 37372 GAAACCGGCGGTAGTAGTGGTGGTGGAAAAATTCAAGTCGGCGGCGAACGCATCACAACT E T G G S S G G G K I Q V G G E R I T T K P A V V V V V E K F K S A A N A S Q L R N R R - - W W W K N S S R R R T H H N . . . . . . 37432 CCGTGAGTTAAAAATGCGGGCACACATCCCTAGGCAAAAGCTGAAAAATATTGAGTCACG P - V K N A G T H P - A K A E K Y - V T R E L K M R A H I P R Q K L K N I E S R S V S - K C G H T S L G K S - K I L S H . . . . . . 37492 CCGATTGCGTGAAAACAGGAGAAACAGTGACTTGACTGACAGAAAAGTCCTATGACACGT P I A - K Q E K Q - L D - Q K S P M T R R L R E N R R N S D L T D R K V L - H V A D C V K T G E T V T - L T E K S Y D T . . . . . . 37552 GGCAATTGCTGAGTGATTCACCTTTTACAAGGCAGTCATAGTAGACTTTGAGGGGGGAAT G N C - V I H L L Q G S H S R L - G G N A I A E - F T F Y K A V I V D F E G G M W Q L L S D S P F T R Q S - - T L R G E . . . . . . 37612 GTTTGACTTGTAAATTAATGGTAGGATTAGAAAAATGCAAAGTTGTAAAGCGTTACGTGC V - L V N - W - D - K N A K L - S V T C F D L - I N G R I R K M Q S C K A L R A C L T C K L M V G L E K C K V V K R Y V . . . 37672 AAGAGTCAATTACAATGTGTCTATTCTAA K S Q L Q C V Y S R V N Y N V S I L Q E S I T M C L F - Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-4_AGS-1_PPS_1 (36511 37437) (frame '1'; 924 bp, 308 residues) 1 SISLAVFTMN NDTPSMIHDP LIDSTGDGGY ALSGKIMLSA IVILFTVVVF MVGLHLYARW 61 YLVSQRRREL LRRRRVNHRR THIVFYVDNP GSGLSDANRG LEQAVLSSLP VFVYSDKTHP 121 EPLECAVCLS EFEENEKGRV LPKCNHSFHS ECIDMWFHSH STCPLCRSPV EAVLIGPDIN 181 RVEVAVTVNE PGSSSGCEEN SSHHSNMTPL GCRRKGLDLT GVRIEVPRRN DFEADLEMGV 241 RVSSPAIQSR SPATRLMSLR RILSMNRKTP TGTSHSPSGS CAADFDIETG GSSGGGKIQV 301 GGERITTP- 3-phase translation of AGS-1 (-strand): . . . . . . 37700 TTAGAATAGACACATTGTAATTGACTCTTGCACGTAACGCTTTACAACTTTGCATTTTTC L E - T H C N - L L H V T L Y N F A F F - N R H I V I D S C T - R F T T L H F S R I D T L - L T L A R N A L Q L C I F . . . . . . 37640 TAATCCTACCATTAATTTACAAGTCAAACATTCCCCCCTCAAAGTCTACTATGACTGCCT - S Y H - F T S Q T F P P Q S L L - L P N P T I N L Q V K H S P L K V Y Y D C L L I L P L I Y K S N I P P S K S T M T A . . . . . . 37580 TGTAAAAGGTGAATCACTCAGCAATTGCCACGTGTCATAGGACTTTTCTGTCAGTCAAGT C K R - I T Q Q L P R V I G L F C Q S S V K G E S L S N C H V S - D F S V S Q V L - K V N H S A I A T C H R T F L S V K . . . . . . 37520 CACTGTTTCTCCTGTTTTCACGCAATCGGCGTGACTCAATATTTTTCAGCTTTTGCCTAG H C F S C F H A I G V T Q Y F S A F A - T V S P V F T Q S A - L N I F Q L L P R S L F L L F S R N R R D S I F F S F C L . . . . . . 37460 GGATGTGTGCCCGCATTTTTAACTCACGGAGTTGTGATGCGTTCGCCGCCGACTTGAATT G C V P A F L T H G V V M R S P P T - I D V C P H F - L T E L - C V R R R L E F G M C A R I F N S R S C D A F A A D L N . . . . . . 37400 TTTCCACCACCACTACTACCGCCGGTTTCTATATCAAAATCCGCGGCGCAACTTCCACTA F P P P L L P P V S I S K S A A Q L P L F H H H Y Y R R F L Y Q N P R R N F H - F S T T T T T A G F Y I K I R G A T S T . . . . . . 37340 GGAGAATGGCTAGTTCCGGTGGGTGTTTTTCTGTTCATACTTAGGATTCTTCTCAAAGAC G E W L V P V G V F L F I L R I L L K D E N G - F R W V F F C S Y L G F F S K T R R M A S S G G C F S V H T - D S S Q R . . . . . . 37280 ATTAAACGAGTCGCTGGTGATCTCGATTGAATCGCCGGTGAACTTACTCTCACTCCCATT I K R V A G D L D - I A G E L T L T P I L N E S L V I S I E S P V N L L S L P F H - T S R W - S R L N R R - T Y S H S H . . . . . . 37220 TCCAAATCGGCTTCGAAATCGTTCCTTCTTGGTACCTCTATTCTTACTCCGGTCAGATCC S K S A S K S F L L G T S I L T P V R S P N R L R N R S F L V P L F L L R S D P F Q I G F E I V P S W Y L Y S Y S G Q I . . . . . . 37160 AATCCTTTTCGCCGGCAACCCAACGGCGTCATATTAGAATGATGACTACTATTCTCCTCA N P F R R Q P N G V I L E - - L L F S S I L F A G N P T A S Y - N D D Y Y S P H Q S F S P A T Q R R H I R M M T T I L L . . . . . . 37100 CAACCCGAACTCGAACCCGGTTCGTTCACTGTTACCGCCACCTCAACCCGGTTAATATCC Q P E L E P G S F T V T A T S T R L I S N P N S N P V R S L L P P P Q P G - Y P T T R T R T R F V H C Y R H L N P V N I . . . . . . 37040 GGTCCGATAAGTACTGCCTCCACCGGAGAGCGACAAAGAGGGCACGTAGAATGAGAATGA G P I S T A S T G E R Q R G H V E - E - V R - V L P P P E S D K E G T - N E N E R S D K Y C L H R R A T K R A R R M R M . . . . . . 36980 AACCACATATCAATACATTCCGAATGAAAAGAGTGATTACACTTGGGTAAAACCCGACCC N H I S I H S E - K E - L H L G K T R P T T Y Q Y I P N E K S D Y T W V K P D P K P H I N T F R M K R V I T L G - N P T . . . . . . 36920 TTTTCATTCTCCTCAAATTCCGATAAACAAACAGCACATTCCAGCGGTTCCGGGTGAGTC F S F S S N S D K Q T A H S S G S G - V F H S P Q I P I N K Q H I P A V P G E S L F I L L K F R - T N S T F Q R F R V S . . . . . . 36860 TTGTCGGAATAAACAAAAACCGGCAAGGAACTGAGAACCGCCTGTTCCAAACCCCGGTTA L S E - T K T G K E L R T A C S K P R L C R N K Q K P A R N - E P P V P N P G - L V G I N K N R Q G T E N R L F Q T P V . . . . . . 36800 GCATCAGACAAACCGGAACCAGGATTATCAACGTAGAAAACAATATGAGTCCGTCGATGG A S D K P E P G L S T - K T I - V R R W H Q T N R N Q D Y Q R R K Q Y E S V D G S I R Q T G T R I I N V E N N M S P S M . . . . . . 36740 TTGACCCTACGGCGGCGAAGGAGTTCACGGCGGCGCTGAGACACAAGGTACCAACGAGCA L T L R R R R S S R R R - D T R Y Q R A - P Y G G E G V H G G A E T Q G T N E H V D P T A A K E F T A A L R H K V P T S . . . . . . 36680 TATAAATGAAGACCCACCATGAAAACAACAACAGTGAATAAGATAACAATAGCACTTAGC Y K - R P T M K T T T V N K I T I A L S I N E D P P - K Q Q Q - I R - Q - H L A I - M K T H H E N N N S E - D N N S T - . . . . . . 36620 ATAATTTTTCCACTCAATGCATAGCCTCCATCTCCTGTGGAATCAATCAATGGATCATGA I I F P L N A - P P S P V E S I N G S - - F F H S M H S L H L L W N Q S M D H E H N F S T Q C I A S I S C G I N Q W I M . . . . . . 36560 ATCATGCTTGGGGTATCGTTATTCATGGTAAATACTGCCAATGAGATGGACTATCTGTAA I M L G V S L F M V N T A N E M D Y L - S C L G Y R Y S W - I L P M R W T I C N N H A W G I V I H G K Y C Q - D G L S V . . . . . . 36500 TTGTAAATATAGCAAAATTATTGTAGAAGATATATATATATATATATATATATATATATA L - I - Q N Y C R R Y I Y I Y I Y I Y I C K Y S K I I V E D I Y I Y I Y I Y I Y I V N I A K L L - K I Y I Y I Y I Y I Y . . . . . . 36440 TATATATATATATATATATATATATATATATATATGGATGGGGAAATGGGCAAGTTGAAG Y I Y I Y I Y I Y I Y M D G E M G K L K I Y I Y I Y I Y I Y I W M G K W A S - R I Y I Y I Y I Y I Y I Y G W G N G Q V E . . . 36380 GAAGAAGAGAGAAGGAGGAAAGTTCTTGA E E E R R R K V L K K R E G G K F L G R R E K E E S S - Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-4_AGS-1_PPS_1 (37239 36931) (frame '0'; 306 bp, 102 residues) 1 TYSHSHFQIG FEIVPSWYLY SYSGQIQSFS PATQRRHIRM MTTILLTTRT RTRFVHCYRH 61 LNPVNIRSDK YCLHRRATKR ARRMRMKPHI NTFRMKRVIT LG- >C01HBa0163B20.1-_PGL-4_AGS-1_PPS_2 (37575 37297) (frame '0'; 276 bp, 92 residues) 1 KVNHSAIATC HRTFLSVKSL FLLFSRNRRD SIFFSFCLGM CARIFNSRSC DAFAADLNFS 61 TTTTTAGFYI KIRGATSTRR MASSGGCFSV HT- >C01HBa0163B20.1-_PGL-4_AGS-1_PPS_3 (36894 36676) (frame '0'; 216 bp, 72 residues) 1 TNSTFQRFRV SLVGINKNRQ GTENRLFQTP VSIRQTGTRI INVENNMSPS MVDPTAAKEF 61 TAALRHKVPT SI- PGL 5 (+ strand): 38652 38989 AGS-1 (38652 38989) SCR (e 0.808) Exon 1 38652 38989 ( 338 n); score: 0.808 PGS (38652 38989) SGN-E213530+ 3-phase translation of AGS-1 (+strand): . . . . . . 38652 GGGAAACTTATATAAATATACTAAAATAAAAAAATATTTACCATTTATAGCAATAATATC G K L I - I Y - N K K I F T I Y S N N I G N L Y K Y T K I K K Y L P F I A I I S E T Y I N I L K - K N I Y H L - Q - Y . . . . . . 38712 TTTTTTTCACTTGATCACTTTTAATTCATTTTTAATACAAGTTTAATACATATTACAAAT F F S L D H F - F I F N T S L I H I T N F F H L I T F N S F L I Q V - Y I L Q I L F F T - S L L I H F - Y K F N T Y Y K . . . . . . 38772 AACAATTTATTATTCATATATAATACAAATTTTAATAATAGATAATACATTTATTGCACA N N L L F I Y N T N F N N R - Y I Y C T T I Y Y S Y I I Q I L I I D N T F I A H - Q F I I H I - Y K F - - - I I H L L H . . . . . . 38832 TTTTAATACACTTATAATACAATATGTCAAATTTTTACCAAACAAATATAATATATTTCA F - Y T Y N T I C Q I F T K Q I - Y I S F N T L I I Q Y V K F L P N K Y N I F Q I L I H L - Y N M S N F Y Q T N I I Y F . . . . . . 38892 AAAAACAATTATAATTCATATATATTGCATACATAATTCACTTTTAATTCATATTGTAGA K N N Y N S Y I L H T - F T F N S Y C R K T I I I H I Y C I H N S L L I H I V D K K Q L - F I Y I A Y I I H F - F I L - . . . . 38952 TTTGACATAGCATTGTTATAAATGGTAATAAATAAAAA F D I A L L - M V I N K L T - H C Y K W - - I K I - H S I V I N G N K - K Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-5_AGS-1_PPS_1 (38758 38961) (frame '2'; 201 bp, 67 residues) 1 YILQITIYYS YIIQILIIDN TFIAHFNTLI IQYVKFLPNK YNIFQKTIII HIYCIHNSLL 61 IHIVDLT- 3-phase translation of AGS-1 (-strand): . . . . . . 38989 TTTTTATTTATTACCATTTATAACAATGCTATGTCAAATCTACAATATGAATTAAAAGTG F L F I T I Y N N A M S N L Q Y E L K V F Y L L P F I T M L C Q I Y N M N - K - F I Y Y H L - Q C Y V K S T I - I K S . . . . . . 38929 AATTATGTATGCAATATATATGAATTATAATTGTTTTTTGAAATATATTATATTTGTTTG N Y V C N I Y E L - L F F E I Y Y I C L I M Y A I Y M N Y N C F L K Y I I F V W E L C M Q Y I - I I I V F - N I L Y L F . . . . . . 38869 GTAAAAATTTGACATATTGTATTATAAGTGTATTAAAATGTGCAATAAATGTATTATCTA V K I - H I V L - V Y - N V Q - M Y Y L - K F D I L Y Y K C I K M C N K C I I Y G K N L T Y C I I S V L K C A I N V L S . . . . . . 38809 TTATTAAAATTTGTATTATATATGAATAATAAATTGTTATTTGTAATATGTATTAAACTT L L K F V L Y M N N K L L F V I C I K L Y - N L Y Y I - I I N C Y L - Y V L N L I I K I C I I Y E - - I V I C N M Y - T . . . . . . 38749 GTATTAAAAATGAATTAAAAGTGATCAAGTGAAAAAAAGATATTATTGCTATAAATGGTA V L K M N - K - S S E K K I L L L - M V Y - K - I K S D Q V K K R Y Y C Y K W - C I K N E L K V I K - K K D I I A I N G . . . . 38689 AATATTTTTTTATTTTAGTATATTTATATAAGTTTCCC N I F L F - Y I Y I S F I F F Y F S I F I - V S K Y F F I L V Y L Y K F P Maximal non-overlapping open reading frames (>= 64 codons): none PGL 6 (- strand): 44854 44094 AGS-1 (44854 44094) SCR (e 0.930) Exon 1 44854 44094 ( 761 n); score: 0.930 PGS (44495 44094) SGN-E354195+ PGS (44737 44251) SGN-E203362- PGS (44854 44300) SGN-E546563- 3-phase translation of AGS-1 (-strand): . . . . . . 44854 GGTATCAATTTCTTAATTGAGTATTGCAGGTTTATTGCTTGAGTATTGCAGATGAAACAA G I N F L I E Y C R F I A - V L Q M K Q V S I S - L S I A G L L L E Y C R - N K Y Q F L N - V L Q V Y C L S I A D E T . . . . . . 44794 ACTCAGGGACCTAGTCGAGGTACTAGGCTCTCATGATGAGGAGCCAGTTGATTGTCAGCT T Q G P S R G T R L S - - G A S - L S A L R D L V E V L G S H D E E P V D C Q L N S G T - S R Y - A L M M R S Q L I V S . . . . . . 44734 GAAGACGGTACAGAAAGTAGGTGCACACTTCCCGATGACGTCAGAAAGTATGACTTTTCC E D G T E S R C T L P D D V R K Y D F S K T V Q K V G A H F P M T S E S M T F P - R R Y R K - V H T S R - R Q K V - L F . . . . . . 44674 AGCCAATTGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAAC S Q L Q R S L G K - L A H I K G T F L N A N C K E V - E S D L P I - K A L S - T Q P I A K K F R K V T C P Y K R H F P K . . . . . . 44614 ATTTTTGTTTAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAATCTACT I F V - F L Q L D K N F S R T L A K S T F L F S F C N L I K T F Q E L L Q N L L H F C L V F A T - - K L F K N S C K I Y . . . . . . 44554 ACAAAGCAAAGGTAGAATTATTCCAAGAACAACAACAATATCTGGGGCTTTTCGTATAGT T K Q R - N Y S K N N N N I W G F S Y S Q S K G R I I P R T T T I S G A F R I V Y K A K V E L F Q E Q Q Q Y L G L F V - . . . . . . 44494 TGTTTAGGAATTCATTCTCTTGTTCTTAAACTGTAAACCATTCCTGAATCTATAAAGGAA C L G I H S L V L K L - T I P E S I K E V - E F I L L F L N C K P F L N L - R N L F R N S F S C S - T V N H S - I Y K G . . . . . . 44434 TTGGTGTGTTGTGTTAGAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTAGGTAGATTGT L V C C V R S L G C P G G I A - - V D C W C V V L E V - V V Q V G - L S R - I V I G V L C - K S R L S R W D S L V G R L . . . . . . 44374 TTTCTACTTAGGCTTGTTAAGCAATAGAGGACTATTGCTTAACTGTAAGATTGATAACTC F L L R L V K Q - R T I A - L - D - - L F Y L G L L S N R G L L L N C K I D N S F S T - A C - A I E D Y C L T V R L I T . . . . . . 44314 TTTCTTACGTTTGGTGTAATCATGTTTCGCTTTTGCTTTTGATGATTAATGAAAACGATT F L T F G V I M F R F C F - - L M K T I F L R L V - S C F A F A F D D - - K R L L S Y V W C N H V S L L L L M I N E N D . . . . . . 44254 GAAAATCCTGTGAGACGGGTCGTGGTTTTACTCCCTTAAGCAAGGAGGTTTCCACGTAAA E N P V R R V V V L L P - A R R F P R K K I L - D G S W F Y S L K Q G G F H V K - K S C E T G R G F T P L S K E V S T - . . . . . . 44194 ATCATTGTGTTGATTTTACTGCATTTAACTCTTGGTTTTATTCATTAGTGTAGTAAGGGA I I V L I L L H L T L G F I H - C S K G S L C - F Y C I - L L V L F I S V V R D N H C V D F T A F N S W F Y S L V - - G . . . . . 44134 CCTGGTCCATTACTTGTTAAGTGAAGGCATATATTCTATCA P G P L L V K - R H I F Y L V H Y L L S E G I Y S I T W S I T C - V K A Y I L S Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 44094 TGATAGAATATATGCCTTCACTTAACAAGTAATGGACCAGGTCCCTTACTACACTAATGA - - N I C L H L T S N G P G P L L H - - D R I Y A F T - Q V M D Q V P Y Y T N E I E Y M P S L N K - W T R S L T T L M . . . . . . 44154 ATAAAACCAAGAGTTAAATGCAGTAAAATCAACACAATGATTTTACGTGGAAACCTCCTT I K P R V K C S K I N T M I L R G N L L - N Q E L N A V K S T Q - F Y V E T S L N K T K S - M Q - N Q H N D F T W K P P . . . . . . 44214 GCTTAAGGGAGTAAAACCACGACCCGTCTCACAGGATTTTCAATCGTTTTCATTAATCAT A - G S K T T T R L T G F S I V F I N H L K G V K P R P V S Q D F Q S F S L I I C L R E - N H D P S H R I F N R F H - S . . . . . . 44274 CAAAAGCAAAAGCGAAACATGATTACACCAAACGTAAGAAAGAGTTATCAATCTTACAGT Q K Q K R N M I T P N V R K S Y Q S Y S K S K S E T - L H Q T - E R V I N L T V S K A K A K H D Y T K R K K E L S I L Q . . . . . . 44334 TAAGCAATAGTCCTCTATTGCTTAACAAGCCTAAGTAGAAAACAATCTACCTACTAAGCT - A I V L Y C L T S L S R K Q S T Y - A K Q - S S I A - Q A - V E N N L P T K L L S N S P L L L N K P K - K T I Y L L S . . . . . . 44394 ATCCCACCTGGACAACCTAGACTTCTAACACAACACACCAATTCCTTTATAGATTCAGGA I P P G Q P R L L T Q H T N S F I D S G S H L D N L D F - H N T P I P L - I Q E Y P T W T T - T S N T T H Q F L Y R F R . . . . . . 44454 ATGGTTTACAGTTTAAGAACAAGAGAATGAATTCCTAAACAACTATACGAAAAGCCCCAG M V Y S L R T R E - I P K Q L Y E K P Q W F T V - E Q E N E F L N N Y T K S P R N G L Q F K N K R M N S - T T I R K A P . . . . . . 44514 ATATTGTTGTTGTTCTTGGAATAATTCTACCTTTGCTTTGTAGTAGATTTTGCAAGAGTT I L L L F L E - F Y L C F V V D F A R V Y C C C S W N N S T F A L - - I L Q E F D I V V V L G I I L P L L C S R F C K S . . . . . . 44574 CTTGAAAAGTTTTTATCAAGTTGCAAAAACTAAACAAAAATGTTTAGGAAAGTGCCTTTT L E K F L S S C K N - T K M F R K V P F L K S F Y Q V A K T K Q K C L G K C L L S - K V F I K L Q K L N K N V - E S A F . . . . . . 44634 ATATGGGCAAGTCACTTTCCTAAACTTCTTTGCAATTGGCTGGAAAAGTCATACTTTCTG I W A S H F P K L L C N W L E K S Y F L Y G Q V T F L N F F A I G W K S H T F - Y M G K S L S - T S L Q L A G K V I L S . . . . . . 44694 ACGTCATCGGGAAGTGTGCACCTACTTTCTGTACCGTCTTCAGCTGACAATCAACTGGCT T S S G S V H L L S V P S S A D N Q L A R H R E V C T Y F L Y R L Q L T I N W L D V I G K C A P T F C T V F S - Q S T G . . . . . . 44754 CCTCATCATGAGAGCCTAGTACCTCGACTAGGTCCCTGAGTTTGTTTCATCTGCAATACT P H H E S L V P R L G P - V C F I C N T L I M R A - Y L D - V P E F V S S A I L S S S - E P S T S T R S L S L F H L Q Y . . . . . 44814 CAAGCAATAAACCTGCAATACTCAATTAAGAAATTGATACC Q A I N L Q Y S I K K L I K Q - T C N T Q L R N - Y S S N K P A I L N - E I D T Maximal non-overlapping open reading frames (>= 64 codons): none PGL 7 (- strand): 45541 45205 AGS-1 (45541 45205) SCR (e 0.847) Exon 1 45541 45205 ( 337 n); score: 0.847 PGS (45541 45205) SGN-E549133+ PGS (45538 45217) SGN-E309004+ 3-phase translation of AGS-1 (-strand): . . . . . . 45541 AGAGGTAAAGAGGCAGAAATTGTTATACTCAAAGCAGAACTGCTTACTGCACAGAGTGAG R G K E A E I V I L K A E L L T A Q S E E V K R Q K L L Y S K Q N C L L H R V R R - R G R N C Y T Q S R T A Y C T E - . . . . . . 45481 GGACCTGGTTCTTCAGTTGTTCAAGCTCTGGAGAAAGATAATGATGAGTTGAAGGTGAAG G P G S S V V Q A L E K D N D E L K V K D L V L Q L F K L W R K I M M S - R - R G T W F F S C S S S G E R - - - V E G E . . . . . . 45421 ATAATTGCCCTGCAAGAAAAGGCCATCAAGGATAATGATGTTGCCAATGCACGACTCACT I I A L Q E K A I K D N D V A N A R L T - L P C K K R P S R I M M L P M H D S L D N C P A R K G H Q G - - C C Q C T T H . . . . . . 45361 CTTGTTATCCAGTCCCTATCTCAAACCCCTCCCTCTTCCTAGATTGTTAATCAATCCTTC L V I Q S L S Q T P P S S - I V N Q S F L L S S P Y L K P L P L P R L L I N P S S C Y P V P I S N P S L F L D C - S I L . . . . . . 45301 CGTGTGTCACTTTTTTTGTTGTGTGGCTTATCAATATGTCGATGAATTTTAGTTTGTTTT R V S L F L L C G L S I C R - I L V C F V C H F F C C V A Y Q Y V D E F - F V F P C V T F F V V W L I N M S M N F S L F . . . . 45241 TAATGTATTTATGTTATGATGGCATGTTGGTTACTTT - C I Y V M M A C W L L N V F M L - W H V G Y F L M Y L C Y D G M L V T Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-7_AGS-1_PPS_1 (45541 45320) (frame '1'; 219 bp, 73 residues) 1 RGKEAEIVIL KAELLTAQSE GPGSSVVQAL EKDNDELKVK IIALQEKAIK DNDVANARLT 61 LVIQSLSQTP PSS- 3-phase translation of AGS-1 (+strand): . . . . . . 45205 AAAGTAACCAACATGCCATCATAACATAAATACATTAAAAACAAACTAAAATTCATCGAC K V T N M P S - H K Y I K N K L K F I D K - P T C H H N I N T L K T N - N S S T S N Q H A I I T - I H - K Q T K I H R . . . . . . 45265 ATATTGATAAGCCACACAACAAAAAAAGTGACACACGGAAGGATTGATTAACAATCTAGG I L I S H T T K K V T H G R I D - Q S R Y - - A T Q Q K K - H T E G L I N N L G H I D K P H N K K S D T R K D - L T I - . . . . . . 45325 AAGAGGGAGGGGTTTGAGATAGGGACTGGATAACAAGAGTGAGTCGTGCATTGGCAACAT K R E G F E I G T G - Q E - V V H W Q H R G R G L R - G L D N K S E S C I G N I E E G G V - D R D W I T R V S R A L A T . . . . . . 45385 CATTATCCTTGATGGCCTTTTCTTGCAGGGCAATTATCTTCACCTTCAACTCATCATTAT H Y P - W P F L A G Q L S S P S T H H Y I I L D G L F L Q G N Y L H L Q L I I I S L S L M A F S C R A I I F T F N S S L . . . . . . 45445 CTTTCTCCAGAGCTTGAACAACTGAAGAACCAGGTCCCTCACTCTGTGCAGTAAGCAGTT L S P E L E Q L K N Q V P H S V Q - A V F L Q S L N N - R T R S L T L C S K Q F S F S R A - T T E E P G P S L C A V S S . . . . 45505 CTGCTTTGAGTATAACAATTTCTGCCTCTTTACCTCT L L - V - Q F L P L Y L C F E Y N N F C L F T S S A L S I T I S A S L P Maximal non-overlapping open reading frames (>= 64 codons): none PGL 8 (+ strand): 56385 57184 AGS-1 (56385 57184) SCR (e 0.819) Exon 1 56385 57184 ( 800 n); score: 0.819 PGS (56385 57184) SGN-E352005- PGS (56519 57184) SGN-E349707- PGS (56574 57184) SGN-E351299- 3-phase translation of AGS-1 (+strand): . . . . . . 56385 GAAAATTAACTGCAAGCAAAATAAATAAAAAGAAAAATGTGATTCTATTACTGAATCGTT E N - L Q A K - I K R K M - F Y Y - I V K I N C K Q N K - K E K C D S I T E S L K L T A S K I N K K K N V I L L L N R . . . . . . 56445 GTGAGTACAATTCAGTTGTTCTCTTGATTCTGTCTCCTAAGTTTCTCCGCGATTCGAGGG V S T I Q L F S - F C L L S F S A I R G - V Q F S C S L D S V S - V S P R F E G C E Y N S V V L L I L S P K F L R D S R . . . . . . 56505 CCTTCAGTTTTTCTGAATTGTTGGATGATGTAGACCTCTTTGAGATATTATCGATCTCCG P S V F L N C W M M - T S L R Y Y R S P L Q F F - I V G - C R P L - D I I D L R A F S F S E L L D D V D L F E I L S I S . . . . . . 56565 GGACATTGGAAAGCGCTTCGTCGTTGTAGTTGATTTGCGGTTGAACTCCGTCGATCACTC G H W K A L R R C S - F A V E L R R S L D I G K R F V V V V D L R L N S V D H S G T L E S A S S L - L I C G - T P S I T . . . . . . 56625 CTTCGAAGAACTATTGATGTTGATGTTGTAGCTTTCTCCAATTTTTTGAATGCTTGTTGA L R R T I D V D V V A F S N F L N A C - F E E L L M L M L - L S P I F - M L V E P S K N Y - C - C C S F L Q F F E C L L . . . . . . 56685 AGAGTATTCTATCTCTCTTTGAATGTCATGTCTAGCCCCTATTTATAGTTGTAGAGAGTG R V F Y L S L N V M S S P Y L - L - R V E Y S I S L - M S C L A P I Y S C R E W K S I L S L F E C H V - P L F I V V E S . . . . . . 56745 GACAAGGTTGTTTGTGATTGTCAAATGATGTCATTTTGACACTTGGCACATTTTGATTCG D K V V C D C Q M M S F - H L A H F D S T R L F V I V K - C H F D T W H I L I R G Q G C L - L S N D V I L T L G T F - F . . . . . . 56805 TTCTTGCATTTGACTGGGACTACCACATCATTTGGACACGTAGCGTCACCTTGTTGGTCT F L H L T G T T T S F G H V A S P C W S S C I - L G L P H H L D T - R H L V G L V L A F D W D Y H I I W T R S V T L L V . . . . . . 56865 TAGATAATTAGTCATTGTGACACGTGTCATGGGTTTGGGCTTTAAGGTGAAATGAACCTT - I I S H C D T C H G F G L - G E M N L R - L V I V T R V M G L G F K V K - T L L D N - S L - H V S W V W A L R - N E P . . . . . . 56925 GAATTTGAATTTAATAAGATGGACTTATTTATTTGTAAAGCCCAAATTAATTTTTCATCC E F E F N K M D L F I C K A Q I N F S S N L N L I R W T Y L F V K P K L I F H P - I - I - - D G L I Y L - S P N - F F I . . . . . . 56985 CAAATGAACATTGATTTAATTCAAATTTTGTATGAATTTGATCCAATACAATTTATTTGT Q M N I D L I Q I L Y E F D P I Q F I C K - T L I - F K F C M N L I Q Y N L F V P N E H - F N S N F V - I - S N T I Y L . . . . . . 57045 CTACAAATGCCCCTTATTTTGAGGACTGTCGATGTAGATGTTTGCCGAAGTTTGGCGACA L Q M P L I L R T V D V D V C R S L A T Y K C P L F - G L S M - M F A E V W R Q S T N A P Y F E D C R C R C L P K F G D . . . . . . 57105 AGACTTGAAGTAGTCATGAATGTGTTTTCCCTTTTTTTAGACTCCTCTGTGTGTAGGCTT R L E V V M N V F S L F L D S S V C R L D L K - S - M C F P F F - T P L C V G F K T - S S H E C V F P F F R L L C V - A . . 57165 TCCAAATTTTGACGAAGAAA S K F - R R P N F D E E F Q I L T K K Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-8_AGS-1_PPS_1 (56910 57176) (frame '1'; 264 bp, 88 residues) 1 GEMNLEFEFN KMDLFICKAQ INFSSQMNID LIQILYEFDP IQFICLQMPL ILRTVDVDVC 61 RSLATRLEVV MNVFSLFLDS SVCRLSKF- >C01HBa0163B20.1+_PGL-8_AGS-1_PPS_2 (56387 56593) (frame '0'; 204 bp, 68 residues) 1 KLTASKINKK KNVILLLNRC EYNSVVLLIL SPKFLRDSRA FSFSELLDDV DLFEILSISG 61 TLESASSL- 3-phase translation of AGS-1 (-strand): . . . . . . 57184 TTTCTTCGTCAAAATTTGGAAAGCCTACACACAGAGGAGTCTAAAAAAAGGGAAAACACA F L R Q N L E S L H T E E S K K R E N T F F V K I W K A Y T Q R S L K K G K T H S S S K F G K P T H R G V - K K G K H . . . . . . 57124 TTCATGACTACTTCAAGTCTTGTCGCCAAACTTCGGCAAACATCTACATCGACAGTCCTC F M T T S S L V A K L R Q T S T S T V L S - L L Q V L S P N F G K H L H R Q S S I H D Y F K S C R Q T S A N I Y I D S P . . . . . . 57064 AAAATAAGGGGCATTTGTAGACAAATAAATTGTATTGGATCAAATTCATACAAAATTTGA K I R G I C R Q I N C I G S N S Y K I - K - G A F V D K - I V L D Q I H T K F E Q N K G H L - T N K L Y W I K F I Q N L . . . . . . 57004 ATTAAATCAATGTTCATTTGGGATGAAAAATTAATTTGGGCTTTACAAATAAATAAGTCC I K S M F I W D E K L I W A L Q I N K S L N Q C S F G M K N - F G L Y K - I S P N - I N V H L G - K I N L G F T N K - V . . . . . . 56944 ATCTTATTAAATTCAAATTCAAGGTTCATTTCACCTTAAAGCCCAAACCCATGACACGTG I L L N S N S R F I S P - S P N P - H V S Y - I Q I Q G S F H L K A Q T H D T C H L I K F K F K V H F T L K P K P M T R . . . . . . 56884 TCACAATGACTAATTATCTAAGACCAACAAGGTGACGCTACGTGTCCAAATGATGTGGTA S Q - L I I - D Q Q G D A T C P N D V V H N D - L S K T N K V T L R V Q M M W - V T M T N Y L R P T R - R Y V S K - C G . . . . . . 56824 GTCCCAGTCAAATGCAAGAACGAATCAAAATGTGCCAAGTGTCAAAATGACATCATTTGA V P V K C K N E S K C A K C Q N D I I - S Q S N A R T N Q N V P S V K M T S F D S P S Q M Q E R I K M C Q V S K - H H L . . . . . . 56764 CAATCACAAACAACCTTGTCCACTCTCTACAACTATAAATAGGGGCTAGACATGACATTC Q S Q T T L S T L Y N Y K - G L D M T F N H K Q P C P L S T T I N R G - T - H S T I T N N L V H S L Q L - I G A R H D I . . . . . . 56704 AAAGAGAGATAGAATACTCTTCAACAAGCATTCAAAAAATTGGAGAAAGCTACAACATCA K E R - N T L Q Q A F K K L E K A T T S K R D R I L F N K H S K N W R K L Q H Q Q R E I E Y S S T S I Q K I G E S Y N I . . . . . . 56644 ACATCAATAGTTCTTCGAAGGAGTGATCGACGGAGTTCAACCGCAAATCAACTACAACGA T S I V L R R S D R R S S T A N Q L Q R H Q - F F E G V I D G V Q P Q I N Y N D N I N S S S K E - S T E F N R K S T T T . . . . . . 56584 CGAAGCGCTTTCCAATGTCCCGGAGATCGATAATATCTCAAAGAGGTCTACATCATCCAA R S A F Q C P G D R - Y L K E V Y I I Q E A L S N V P E I D N I S K R S T S S N T K R F P M S R R S I I S Q R G L H H P . . . . . . 56524 CAATTCAGAAAAACTGAAGGCCCTCGAATCGCGGAGAAACTTAGGAGACAGAATCAAGAG Q F R K T E G P R I A E K L R R Q N Q E N S E K L K A L E S R R N L G D R I K R T I Q K N - R P S N R G E T - E T E S R . . . . . . 56464 AACAACTGAATTGTACTCACAACGATTCAGTAATAGAATCACATTTTTCTTTTTATTTAT N N - I V L T T I Q - - N H I F L F I Y T T E L Y S Q R F S N R I T F F F L F I E Q L N C T H N D S V I E S H F S F Y L . . 56404 TTTGCTTGCAGTTAATTTTC F A C S - F L L A V N F F C L Q L I F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-8_AGS-1_PPS_1 (56634 56386) (frame '2'; 249 bp, 83 residues) 1 FFEGVIDGVQ PQINYNDEAL SNVPEIDNIS KRSTSSNNSE KLKALESRRN LGDRIKRTTE 61 LYSQRFSNRI TFFFLFILLA VNF PGL 9 (+ strand): 63294 65127 AGS-1 (63294 65127) SCR (e 0.973) Exon 1 63294 65127 (1834 n); score: 0.973 PGS (63294 63878) SGN-E333295+ PGS (63294 63766) SGN-E330837+ PGS (63297 63950) SGN-E332231+ PGS (63297 63855) SGN-E331580+ PGS (63299 64118) SGN-E334509+ PGS (63300 64117) SGN-E334504+ PGS (63300 64092) SGN-E547512+ PGS (63300 64067) SGN-E334024+ PGS (63300 63991) SGN-E332090+ PGS (63300 63766) SGN-E331435+ PGS (63301 64047) SGN-E332545+ PGS (63301 64042) SGN-E331950+ PGS (63301 64014) SGN-E334152+ PGS (63301 64014) SGN-E334584+ PGS (63301 63978) SGN-E332023+ PGS (63301 63766) SGN-E332788+ PGS (63302 63968) SGN-E330458+ PGS (63303 63943) SGN-E330049+ PGS (63303 63879) SGN-E330071+ PGS (63305 64180) SGN-E378573+ PGS (63305 64128) SGN-E334554+ PGS (63305 63957) SGN-E374064+ PGS (63320 64022) SGN-E333363+ PGS (63328 63879) SGN-E332731+ PGS (63338 63989) SGN-E334715+ PGS (63363 64127) SGN-E546809+ PGS (63374 63917) SGN-E332238+ PGS (63383 64022) SGN-E329360+ PGS (63394 64127) SGN-E546845+ PGS (63410 64131) SGN-E331929+ PGS (63419 64201) SGN-E333795+ PGS (63419 64130) SGN-E332713+ PGS (63419 64130) SGN-E332866+ PGS (63419 64025) SGN-E333056+ PGS (63423 64213) SGN-E333892+ PGS (63423 64212) SGN-E333848+ PGS (63423 64130) SGN-E333232+ PGS (63436 64215) SGN-E546751+ PGS (63467 63880) SGN-E332772+ PGS (63600 64035) SGN-E326012+ PGS (63705 64388) SGN-E332551+ PGS (63705 64362) SGN-E332650+ PGS (63705 64362) SGN-E334702+ PGS (63705 64354) SGN-E334236+ PGS (63705 64117) SGN-E332787+ PGS (63749 64280) SGN-E331514+ PGS (63787 64343) SGN-E331151+ PGS (63821 64514) SGN-E333376+ PGS (63821 64350) SGN-E333032+ PGS (63896 64656) SGN-E332184+ PGS (63896 64652) SGN-E331978+ PGS (64025 64667) SGN-E332171+ PGS (64025 64653) SGN-E332127+ PGS (64062 65029) SGN-E378571+ PGS (64062 64743) SGN-E374055+ PGS (64382 65127) SGN-E547511- PGS (64406 65127) SGN-E374054- PGS (64438 65127) SGN-E549438- PGS (64502 65127) SGN-E374063- PGS (64690 65127) SGN-E226303- PGS (64723 65127) SGN-E226674- PGS (64751 65127) SGN-E220264- PGS (64793 65127) SGN-E216887- PGS (64821 65127) SGN-E220168- PGS (64845 65127) SGN-E224767- PGS (64859 65127) SGN-E224547- 3-phase translation of AGS-1 (+strand): . . . . . . 63294 TAAACACAGCCTTCAATAAAACCCCTCTGAGTTCTTCACTTACAAGAAGAACCATAGGGG - T Q P S I K P L - V L H L Q E E P - G K H S L Q - N P S E F F T Y K K N H R G N T A F N K T P L S S S L T R R T I G . . . . . . 63354 TTGTTTCATAGGGAACTCCCCCCATAAAAAAAAATCCAAAAAAACAAAAAAACCAAAAAA L F H R E L P P - K K I Q K N K K T K K C F I G N S P H K K K S K K T K K P K K V V S - G T P P I K K N P K K Q K N Q K . . . . . . 63414 ATGACAAAGAAGGTGGTAATTGGTGGAATAGCTTCTGTTCTTGTGGTGGCTTGTGTGGTG M T K K V V I G G I A S V L V V A C V V - Q R R W - L V E - L L F L W W L V W W N D K E G G N W W N S F C S C G G L C G . . . . . . 63474 GCAGCCTGTGTCACCCTGACTAAACATGATTCTGATACATCATCAAATGGAGTTGCAACT A A C V T L T K H D S D T S S N G V A T Q P V S P - L N M I L I H H Q M E L Q L G S L C H P D - T - F - Y I I K W S C N . . . . . . 63534 TCAACAAAGTCAGTTGAATCTATGTGTCAACCCACACCATACAAACAAACTTGTGAAAAG S T K S V E S M C Q P T P Y K Q T C E K Q Q S Q L N L C V N P H H T N K L V K R F N K V S - I Y V S T H T I Q T N L - K . . . . . . 63594 ACCCTCTCCGCAGCAAAGAATGTGTCCGATCCAAAGGACTACATCAAGGTTGCATTCGAA T L S A A K N V S D P K D Y I K V A F E P S P Q Q R M C P I Q R T T S R L H S K D P L R S K E C V R S K G L H Q G C I R . . . . . . 63654 GCCACTGTGGCAGACATCAAGAATGCCATCAAGAACACTGAGCCAGTTAAGAAAGCTGCC A T V A D I K N A I K N T E P V K K A A P L W Q T S R M P S R T L S Q L R K L P S H C G R H Q E C H Q E H - A S - E S C . . . . . . 63714 AGTGATCCTTACACCAAAGACGCTCTCCTTGCTTGTGAAGAGGTGTTTGATCTAGCCGTT S D P Y T K D A L L A C E E V F D L A V V I L T P K T L S L L V K R C L I - P L Q - S L H Q R R S P C L - R G V - S S R . . . . . . 63774 GAGGAACTAAGGGGCTCTATCGCTAGGATTGAGAACTTTGATTTCTCAAAGATGAAGGAT E E L R G S I A R I E N F D F S K M K D R N - G A L S L G L R T L I S Q R - R I - G T K G L Y R - D - E L - F L K D E G . . . . . . 63834 ATAGTGGATGACCTCAAGTCATGGCTTAGCGCTGTCGTTGCTTATGAAGAGACTTGTTTA I V D D L K S W L S A V V A Y E E T C L - W M T S S H G L A L S L L M K R L V - Y S G - P Q V M A - R C R C L - R D L F . . . . . . 63894 GATGGTTTCACCAAATCAGAATACAGTGCAACCCGTGACGAAATGATGAAGCTAATGAGT D G F T K S E Y S A T R D E M M K L M S M V S P N Q N T V Q P V T K - - S - - V R W F H Q I R I Q C N P - R N D E A N E . . . . . . 63954 ACCACCCGGGAGCTGAGTAGCAATGCTCTTTCCATGGTCAACAACTTTGGTGAAATGATC T T R E L S S N A L S M V N N F G E M I P P G S - V A M L F P W S T T L V K - S Y H P G A E - Q C S F H G Q Q L W - N D . . . . . . 64014 ACACAAAACACAGGCCTTACCCGCAAATTGTTATCAAACAGTGACTCATTTGTCGAAGCT T Q N T G L T R K L L S N S D S F V E A H K T Q A L P A N C Y Q T V T H L S K L H T K H R P Y P Q I V I K Q - L I C R S . . . . . . 64074 AGTAACCGTAAGCTCCTTCAAATTTCTGCCTCCAAGCCTAATGCTGTGGTTTCTACCAGT S N R K L L Q I S A S K P N A V V S T S V T V S S F K F L P P S L M L W F L P V - - P - A P S N F C L Q A - C C G F Y Q . . . . . . 64134 GGAGGCGGACAATACAAGACCATTCAGGAAGCACTTCAAGCTGTCCCCAGGAGCAGTCCA G G G Q Y K T I Q E A L Q A V P R S S P E A D N T R P F R K H F K L S P G A V Q W R R T I Q D H S G S T S S C P Q E Q S . . . . . . 64194 ACTCCTTTCGTTATCCTGATCAAGGCGGGTACATACAAGGAACACATTGAAATCGAAAAG T P F V I L I K A G T Y K E H I E I E K L L S L S - S R R V H T R N T L K S K R N S F R Y P D Q G G Y I Q G T H - N R K . . . . . . 64254 AACATGCTAAATGTTGTGCTTATTGGTGAAGGCCCAACCAAGACCATAATCACCGGTGAC N M L N V V L I G E G P T K T I I T G D T C - M L C L L V K A Q P R P - S P V T E H A K C C A Y W - R P N Q D H N H R - . . . . . . 64314 CAGGCAGTAGTTCCTAACCGTATATCAACATGGCATACAGCCACCCTTGGTGTTTGTGGT Q A V V P N R I S T W H T A T L G V C G R Q - F L T V Y Q H G I Q P P L V F V V P G S S S - P Y I N M A Y S H P W C L W . . . . . . 64374 GATGGTTTCGTTATGAAGGACATGGGTATTGAAAACACAGCAGGACCCACAAAAGAACAA D G F V M K D M G I E N T A G P T K E Q M V S L - R T W V L K T Q Q D P Q K N K - W F R Y E G H G Y - K H S R T H K R T . . . . . . 64434 GCCGTTGCATTGAGAATTAATGCTGATAAGGCTGTTCTCTACAACTGCAATATCGATGGT A V A L R I N A D K A V L Y N C N I D G P L H - E L M L I R L F S T T A I S M V S R C I E N - C - - G C S L Q L Q Y R W . . . . . . 64494 TACCAAGACACGTTATATGCTCACTCAGGAAGACAATTTTATCGTGATTGTACCATTACA Y Q D T L Y A H S G R Q F Y R D C T I T T K T R Y M L T Q E D N F I V I V P L Q L P R H V I C S L R K T I L S - L Y H Y . . . . . . 64554 GGCACCATTGATTTCTTGTTTGGTGATGCAAGTGCTGTTTTCCAAAACTGCAAATTGATT G T I D F L F G D A S A V F Q N C K L I A P L I S C L V M Q V L F S K T A N - L R H H - F L V W - C K C C F P K L Q I D . . . . . . 64614 GTGAGGAAACCAGGTCCTAATCAAGCTTGCATGATCACTGCTCAAGGAAGGATGAGAAAA V R K P G P N Q A C M I T A Q G R M R K - G N Q V L I K L A - S L L K E G - E K C E E T R S - S S L H D H C S R K D E K . . . . . . 64674 GATTCCTTAGGTGGATTCGTTATCCAAAATTGTGACATCAAGGCTGATCAAGCACTCACT D S L G G F V I Q N C D I K A D Q A L T I P - V D S L S K I V T S R L I K H S L R F L R W I R Y P K L - H Q G - S S T H . . . . . . 64734 AGCGCCAATCCACCAGTCAAAGTCTATCTTGGACGTCCATGGAAGGAGTTTTCCAAGACC S A N P P V K V Y L G R P W K E F S K T A P I H Q S K S I L D V H G R S F P R P - R Q S T S Q S L S W T S M E G V F Q D . . . . . . 64794 ATCATAATGCAATCAAACATCGATGGATTCGTTGATCCATCAGGATGGTCACCATGGAAC I I M Q S N I D G F V D P S G W S P W N S - C N Q T S M D S L I H Q D G H H G T H H N A I K H R W I R - S I R M V T M E . . . . . . 64854 ACAACTGATTTTGGAATACACACATGTTTTTATGCAGAGTATCAGAACAGAGGACCAGGT T T D F G I H T C F Y A E Y Q N R G P G Q L I L E Y T H V F M Q S I R T E D Q V H N - F W N T H M F L C R V S E Q R T R . . . . . . 64914 GCTGCACTTGACAAAAGAGTCTCCACATGGAGAGGTTACCAAAAGGATATTTCAGGAGAC A A L D K R V S T W R G Y Q K D I S G D L H L T K E S P H G E V T K R I F Q E T C C T - Q K S L H M E R L P K G Y F R R . . . . . . 64974 GTTATTAACAGCTTCACTGCCGGTAAATTCATTAATACACAACAGCCATGGTTACCAATG V I N S F T A G K F I N T Q Q P W L P M L L T A S L P V N S L I H N S H G Y Q C R Y - Q L H C R - I H - Y T T A M V T N . . . . . . 65034 TTTGATATTCCCTATGAAGCTGGCATGATGAAGGTGTAATTACATATACCATTCATCCTG F D I P Y E A G M M K V - L H I P F I L L I F P M K L A - - R C N Y I Y H S S C V - Y S L - S W H D E G V I T Y T I H P . . . . 65094 TAATTTTTTCTAATTATTCAAAATTATATTTCCT - F F L I I Q N Y I S N F F - L F K I I F P V I F S N Y S K L Y F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-9_AGS-1_PPS_1 (63381 65072) (frame '1'; 1689 bp, 563 residues) 1 KKIQKNKKTK KMTKKVVIGG IASVLVVACV VAACVTLTKH DSDTSSNGVA TSTKSVESMC 61 QPTPYKQTCE KTLSAAKNVS DPKDYIKVAF EATVADIKNA IKNTEPVKKA ASDPYTKDAL 121 LACEEVFDLA VEELRGSIAR IENFDFSKMK DIVDDLKSWL SAVVAYEETC LDGFTKSEYS 181 ATRDEMMKLM STTRELSSNA LSMVNNFGEM ITQNTGLTRK LLSNSDSFVE ASNRKLLQIS 241 ASKPNAVVST SGGGQYKTIQ EALQAVPRSS PTPFVILIKA GTYKEHIEIE KNMLNVVLIG 301 EGPTKTIITG DQAVVPNRIS TWHTATLGVC GDGFVMKDMG IENTAGPTKE QAVALRINAD 361 KAVLYNCNID GYQDTLYAHS GRQFYRDCTI TGTIDFLFGD ASAVFQNCKL IVRKPGPNQA 421 CMITAQGRMR KDSLGGFVIQ NCDIKADQAL TSANPPVKVY LGRPWKEFSK TIIMQSNIDG 481 FVDPSGWSPW NTTDFGIHTC FYAEYQNRGP GAALDKRVST WRGYQKDISG DVINSFTAGK 541 FINTQQPWLP MFDIPYEAGM MKV- 3-phase translation of AGS-1 (-strand): . . . . . . 65127 AGGAAATATAATTTTGAATAATTAGAAAAAATTACAGGATGAATGGTATATGTAATTACA R K Y N F E - L E K I T G - M V Y V I T G N I I L N N - K K L Q D E W Y M - L H E I - F - I I R K N Y R M N G I C N Y . . . . . . 65067 CCTTCATCATGCCAGCTTCATAGGGAATATCAAACATTGGTAACCATGGCTGTTGTGTAT P S S C Q L H R E Y Q T L V T M A V V Y L H H A S F I G N I K H W - P W L L C I T F I M P A S - G I S N I G N H G C C V . . . . . . 65007 TAATGAATTTACCGGCAGTGAAGCTGTTAATAACGTCTCCTGAAATATCCTTTTGGTAAC - - I Y R Q - S C - - R L L K Y P F G N N E F T G S E A V N N V S - N I L L V T L M N L P A V K L L I T S P E I S F W - . . . . . . 64947 CTCTCCATGTGGAGACTCTTTTGTCAAGTGCAGCACCTGGTCCTCTGTTCTGATACTCTG L S M W R L F C Q V Q H L V L C S D T L S P C G D S F V K C S T W S S V L I L C P L H V E T L L S S A A P G P L F - Y S . . . . . . 64887 CATAAAAACATGTGTGTATTCCAAAATCAGTTGTGTTCCATGGTGACCATCCTGATGGAT H K N M C V F Q N Q L C S M V T I L M D I K T C V Y S K I S C V P W - P S - W I A - K H V C I P K S V V F H G D H P D G . . . . . . 64827 CAACGAATCCATCGATGTTTGATTGCATTATGATGGTCTTGGAAAACTCCTTCCATGGAC Q R I H R C L I A L - W S W K T P S M D N E S I D V - L H Y D G L G K L L P W T S T N P S M F D C I M M V L E N S F H G . . . . . . 64767 GTCCAAGATAGACTTTGACTGGTGGATTGGCGCTAGTGAGTGCTTGATCAGCCTTGATGT V Q D R L - L V D W R - - V L D Q P - C S K I D F D W W I G A S E C L I S L D V R P R - T L T G G L A L V S A - S A L M . . . . . . 64707 CACAATTTTGGATAACGAATCCACCTAAGGAATCTTTTCTCATCCTTCCTTGAGCAGTGA H N F G - R I H L R N L F S S F L E Q - T I L D N E S T - G I F S H P S L S S D S Q F W I T N P P K E S F L I L P - A V . . . . . . 64647 TCATGCAAGCTTGATTAGGACCTGGTTTCCTCACAATCAATTTGCAGTTTTGGAAAACAG S C K L D - D L V S S Q S I C S F G K Q H A S L I R T W F P H N Q F A V L E N S I M Q A - L G P G F L T I N L Q F W K T . . . . . . 64587 CACTTGCATCACCAAACAAGAAATCAATGGTGCCTGTAATGGTACAATCACGATAAAATT H L H H Q T R N Q W C L - W Y N H D K I T C I T K Q E I N G A C N G T I T I K L A L A S P N K K S M V P V M V Q S R - N . . . . . . 64527 GTCTTCCTGAGTGAGCATATAACGTGTCTTGGTAACCATCGATATTGCAGTTGTAGAGAA V F L S E H I T C L G N H R Y C S C R E S S - V S I - R V L V T I D I A V V E N C L P E - A Y N V S W - P S I L Q L - R . . . . . . 64467 CAGCCTTATCAGCATTAATTCTCAATGCAACGGCTTGTTCTTTTGTGGGTCCTGCTGTGT Q P Y Q H - F S M Q R L V L L W V L L C S L I S I N S Q C N G L F F C G S C C V T A L S A L I L N A T A C S F V G P A V . . . . . . 64407 TTTCAATACCCATGTCCTTCATAACGAAACCATCACCACAAACACCAAGGGTGGCTGTAT F Q Y P C P S - R N H H H K H Q G W L Y F N T H V L H N E T I T T N T K G G C M F S I P M S F I T K P S P Q T P R V A V . . . . . . 64347 GCCATGTTGATATACGGTTAGGAACTACTGCCTGGTCACCGGTGATTATGGTCTTGGTTG A M L I Y G - E L L P G H R - L W S W L P C - Y T V R N Y C L V T G D Y G L G W C H V D I R L G T T A W S P V I M V L V . . . . . . 64287 GGCCTTCACCAATAAGCACAACATTTAGCATGTTCTTTTCGATTTCAATGTGTTCCTTGT G L H Q - A Q H L A C S F R F Q C V P C A F T N K H N I - H V L F D F N V F L V G P S P I S T T F S M F F S I S M C S L . . . . . . 64227 ATGTACCCGCCTTGATCAGGATAACGAAAGGAGTTGGACTGCTCCTGGGGACAGCTTGAA M Y P P - S G - R K E L D C S W G Q L E C T R L D Q D N E R S W T A P G D S L K Y V P A L I R I T K G V G L L L G T A - . . . . . . 64167 GTGCTTCCTGAATGGTCTTGTATTGTCCGCCTCCACTGGTAGAAACCACAGCATTAGGCT V L P E W S C I V R L H W - K P Q H - A C F L N G L V L S A S T G R N H S I R L S A S - M V L Y C P P P L V E T T A L G . . . . . . 64107 TGGAGGCAGAAATTTGAAGGAGCTTACGGTTACTAGCTTCGACAAATGAGTCACTGTTTG W R Q K F E G A Y G Y - L R Q M S H C L G G R N L K E L T V T S F D K - V T V - L E A E I - R S L R L L A S T N E S L F . . . . . . 64047 ATAACAATTTGCGGGTAAGGCCTGTGTTTTGTGTGATCATTTCACCAAAGTTGTTGACCA I T I C G - G L C F V - S F H Q S C - P - Q F A G K A C V L C D H F T K V V D H D N N L R V R P V F C V I I S P K L L T . . . . . . 63987 TGGAAAGAGCATTGCTACTCAGCTCCCGGGTGGTACTCATTAGCTTCATCATTTCGTCAC W K E H C Y S A P G W Y S L A S S F R H G K S I A T Q L P G G T H - L H H F V T M E R A L L L S S R V V L I S F I I S S . . . . . . 63927 GGGTTGCACTGTATTCTGATTTGGTGAAACCATCTAAACAAGTCTCTTCATAAGCAACGA G L H C I L I W - N H L N K S L H K Q R G C T V F - F G E T I - T S L F I S N D R V A L Y S D L V K P S K Q V S S - A T . . . . . . 63867 CAGCGCTAAGCCATGACTTGAGGTCATCCACTATATCCTTCATCTTTGAGAAATCAAAGT Q R - A M T - G H P L Y P S S L R N Q S S A K P - L E V I H Y I L H L - E I K V T A L S H D L R S S T I S F I F E K S K . . . . . . 63807 TCTCAATCCTAGCGATAGAGCCCCTTAGTTCCTCAACGGCTAGATCAAACACCTCTTCAC S Q S - R - S P L V P Q R L D Q T P L H L N P S D R A P - F L N G - I K H L F T F S I L A I E P L S S S T A R S N T S S . . . . . . 63747 AAGCAAGGAGAGCGTCTTTGGTGTAAGGATCACTGGCAGCTTTCTTAACTGGCTCAGTGT K Q G E R L W C K D H W Q L S - L A Q C S K E S V F G V R I T G S F L N W L S V Q A R R A S L V - G S L A A F L T G S V . . . . . . 63687 TCTTGATGGCATTCTTGATGTCTGCCACAGTGGCTTCGAATGCAACCTTGATGTAGTCCT S - W H S - C L P Q W L R M Q P - C S P L D G I L D V C H S G F E C N L D V V L F L M A F L M S A T V A S N A T L M - S . . . . . . 63627 TTGGATCGGACACATTCTTTGCTGCGGAGAGGGTCTTTTCACAAGTTTGTTTGTATGGTG L D R T H S L L R R G S F H K F V C M V W I G H I L C C G E G L F T S L F V W C F G S D T F F A A E R V F S Q V C L Y G . . . . . . 63567 TGGGTTGACACATAGATTCAACTGACTTTGTTGAAGTTGCAACTCCATTTGATGATGTAT W V D T - I Q L T L L K L Q L H L M M Y G L T H R F N - L C - S C N S I - - C I V G - H I D S T D F V E V A T P F D D V . . . . . . 63507 CAGAATCATGTTTAGTCAGGGTGACACAGGCTGCCACCACACAAGCCACCACAAGAACAG Q N H V - S G - H R L P P H K P P Q E Q R I M F S Q G D T G C H H T S H H K N R S E S C L V R V T Q A A T T Q A T T R T . . . . . . 63447 AAGCTATTCCACCAATTACCACCTTCTTTGTCATTTTTTTGGTTTTTTTGTTTTTTTGGA K L F H Q L P P S L S F F W F F C F F G S Y S T N Y H L L C H F F G F F V F L D E A I P P I T T F F V I F L V F L F F W . . . . . . 63387 TTTTTTTTTATGGGGGGAGTTCCCTATGAAACAACCCCTATGGTTCTTCTTGTAAGTGAA F F F M G G V P Y E T T P M V L L V S E F F L W G E F P M K Q P L W F F L - V K I F F Y G G S S L - N N P Y G S S C K - . . . . 63327 GAACTCAGAGGGGTTTTATTGAAGGCTGTGTTTA E L R G V L L K A V F N S E G F Y - R L C L R T Q R G F I E G C V Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-9_AGS-1_PPS_1 (64471 64169) (frame '0'; 300 bp, 100 residues) 1 RTALSALILN ATACSFVGPA VFSIPMSFIT KPSPQTPRVA VCHVDIRLGT TAWSPVIMVL 61 VGPSPISTTF SMFFSISMCS LYVPALIRIT KGVGLLLGTA - >C01HBa0163B20.1-_PGL-9_AGS-1_PPS_2 (63764 63543) (frame '2'; 219 bp, 73 residues) 1 IKHLFTSKES VFGVRITGSF LNWLSVLDGI LDVCHSGFEC NLDVVLWIGH ILCCGEGLFT 61 SLFVWCGLTH RFN- >C01HBa0163B20.1-_PGL-9_AGS-1_PPS_3 (64090 63875) (frame '0'; 213 bp, 71 residues) 1 RSLRLLASTN ESLFDNNLRV RPVFCVIISP KLLTMERALL LSSRVVLISF IISSRVALYS 61 DLVKPSKQVS S- >C01HBa0163B20.1-_PGL-9_AGS-1_PPS_4 (63559 63359) (frame '0'; 198 bp, 66 residues) 1 HIDSTDFVEV ATPFDDVSES CLVRVTQAAT TQATTRTEAI PPITTFFVIF LVFLFFWIFF 61 YGGSSL- PGL 10 (- strand): 76962 67314 AGS-1 (72056 71957,70349 70332,67757 67721,67357 67314) SCR (e 0.880 d 0.000 a 0.978,e 0.611 d 0.735 a 0.000,e 0.703 d 0.000 a 0.000,e 0.727) Exon 1 72056 71957 ( 100 n); score: 0.880 Intron 1 71956 70350 (1607 n); Pd: 0.000 Pa: 0.978 Exon 2 70349 70332 ( 18 n); score: 0.611 Intron 2 70331 67758 (2574 n); Pd: 0.735 Pa: 0.000 Exon 3 67757 67721 ( 37 n); score: 0.703 Intron 3 67720 67358 ( 363 n); Pd: 0.000 Pa: 0.000 Exon 4 67357 67314 ( 44 n); score: 0.727 PGS (72025 71957,70349 70332,67757 67721,67357 67314) SGN-E540107- PGS (72025 71957,70349 70332,67757 67721,67357 67314) SGN-E540114- PGS (72025 71957,70349 70332,67757 67721,67357 67314) SGN-E540110+ PGS (72025 71957,70349 70332,67757 67721,67357 67314) SGN-E548332+ PGS (72025 71957,70349 70332,67757 67721,67357 67314) SGN-E286267+ PGS (72056 71957) SGN-E357775- 3-phase translation of AGS-1 (-strand): . . . . . . 72056 GGGTTTTCTCTTTCTCTCTCTAGATCTCTCATCTCTTTCTCTTGAAAGTTCTTGTGTTCT G F S L S L S R S L I S F S - K F L C S G F L F L S L D L S S L S L E S S C V L V F S F S L - I S H L F L L K V L V F . . . . : . . : 71996 TCATTCATCTAGTGTGTGTGCGTGAATTCGATCCTAACAG : CCGTTTTCAAAACTAAAG : AT S F I - C V C V N S I L T : A V F K T K : D H S S S V C A - I R S - Q : P F S K L K : I F I H L V C V R E F D P N S : R F Q N - R : . . . . : . . 67755 ATTCAATACTATCACAAGAACAATATCACAGTTCA : AAGCTTGAAACCCTAGACAGATTGA I Q Y Y H K N N I T V Q : S L K P - T D - F N T I T R T I S Q F : K A - N P R Q I D Y S I L S Q E Q Y H S S : K L E T L D R L . . 67332 TCCATTCCTTTCCAGATTC S I P F Q I P F L S R F I H S F P D Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (76962 76576,74693 74687,72320 72316,71956 71600,71110 70587,69080 69050) SCR (e 0.793 d 0.990 a 0.892,e 0.714 d 0.844 a 0.929,e 0.600 d 0.000 a 0.788,e 0.788 d 0.000 a 0.000,e 0.846 d 0.210 a 0.000,e 0.742) Exon 1 76962 76576 ( 387 n); score: 0.793 Intron 1 76575 74694 (1882 n); Pd: 0.990 Pa: 0.892 Exon 2 74693 74687 ( 7 n); score: 0.714 Intron 2 74686 72321 (2366 n); Pd: 0.844 Pa: 0.929 Exon 3 72320 72316 ( 5 n); score: 0.600 Intron 3 72315 71957 ( 359 n); Pd: 0.000 Pa: 0.788 Exon 4 71956 71600 ( 357 n); score: 0.788 Intron 4 71599 71111 ( 489 n); Pd: 0.000 Pa: 0.000 Exon 5 71110 70587 ( 524 n); score: 0.846 Intron 5 70586 69081 (1506 n); Pd: 0.210 Pa: 0.000 Exon 6 69080 69050 ( 31 n); score: 0.742 PGS (71019 70587,69080 69050) SGN-E333848- PGS (71015 70587,69080 69050) SGN-E333892- PGS (70934 70587,69080 69050) SGN-E332713- PGS (70934 70587,69080 69050) SGN-E332866- PGS (70934 70587,69080 69050) SGN-E333232- PGS (70934 70587,69080 69050) SGN-E334554- PGS (70925 70587,69080 69050) SGN-E334509- PGS (70924 70587,69080 69050) SGN-E334504- PGS (70854 70587,69080 69050) SGN-E332545- PGS (70827 70587,69080 69050) SGN-E333363- PGS (70821 70587,69080 69050) SGN-E334152- PGS (70821 70587,69080 69050) SGN-E334584- PGS (70796 70587,69080 69050) SGN-E332090- PGS (70784 70587,69080 69050) SGN-E332023- PGS (70764 70587,69080 69050) SGN-E330458- PGS (70759 70587,69080 69050) SGN-E332231- PGS (70752 70587,69080 69050) SGN-E330049- PGS (71683 71600,71110 70591) SGN-E332551- PGS (71110 70591) SGN-E332650- PGS (71110 70591) SGN-E334236- PGS (71110 70591) SGN-E334702- PGS (71008 70591) SGN-E333795- PGS (70936 70591) SGN-E331929- PGS (71110 70595) SGN-E331151- PGS (71810 71600,71110 70631) SGN-E333376- PGS (71110 70631) SGN-E333032- PGS (71877 71600,71110 70705) SGN-E331978- PGS (71877 71600,71110 70705) SGN-E332184- PGS (71877 71600,71110 70833) SGN-E332127- PGS (71877 71600,71110 70833) SGN-E332171- PGS (76914 76576,74693 74687,72320 72316,71956 71600,71110 70869) SGN-E378571- PGS (71948 71600,71110 70869) SGN-E374055- PGS (76959 76576) SGN-E547511+ PGS (76959 76576) SGN-E374054+ PGS (76959 76576) SGN-E374063+ PGS (76959 76576) SGN-E549438+ PGS (76962 76631) SGN-E226674+ PGS (76960 76631) SGN-E226303+ PGS (76960 76638) SGN-E220264+ PGS (76960 76679) SGN-E216887+ PGS (76960 76707) SGN-E220168+ 3-phase translation of AGS-2 (-strand): . . . . . . 76962 GTTAATTAGACCTTCATAATGCCAGGCTCAAAGGGAATATCACTCTTGGGTAGCCAAGGG V N - T F I M P G S K G I S L L G S Q G L I R P S - C Q A Q R E Y H S W V A K G - L D L H N A R L K G N I T L G - P R . . . . . . 76902 TCTCTTGTGTTGATGAAATTGCCGTCAATGAATTGGTTAATAGTGTCTCCTGAAATTCCC S L V L M K L P S M N W L I V S P E I P L L C - - N C R Q - I G - - C L L K F P V S C V D E I A V N E L V N S V S - N S . . . . . . 76842 TTTTGGTAACCTCTCCATGTTGAGATTTTTTTGTCAAGTGCAGCACCTGGTTCTCTGTTC F W - P L H V E I F L S S A A P G S L F F G N L S M L R F F C Q V Q H L V L C S L L V T S P C - D F F V K C S T W F S V . . . . . . 76782 TGATACTCTGCATAAAACATGTGTGTTTTCCAAAATTAGTTGTGTTCCATGGTGACCATC - Y S A - N M C V F Q N - L C S M V T I D T L H K T C V F S K I S C V P W - P S L I L C I K H V C F P K L V V F H G D H . . . . . . 76722 CTGATGGATCGATGAATGCATCAATGTTTGATTGCATTATGATGGTCTTGGAATACTCCT L M D R - M H Q C L I A L - W S W N T P - W I D E C I N V - L H Y D G L G I L L P D G S M N A S M F D C I M M V L E Y S . . . . . . 76662 TCCATGGACGTCCAATATAGGCTTTTAATGGTGCTAGGGAACCCTGCCTGAGGCTTGATG S M D V Q Y R L L M V L G N P A - G L M P W T S N I G F - W C - G T L P E A - C F H G R P I - A F N G A R E P C L R L D . . . : . : : . . 76602 TCACAATTCTGGATAACTAATCCAGAG : CAGGAAG : TTGTT : TTTAGACTTTCCTTGAGAAGT S Q F W I T N P E : Q E : V V : F R L S L R S H N S G - L I Q S : R K : L F : L D F P - E V V T I L D N - S R : A G S : C : F - T F L E K . . . . . . 71935 GACCATGCAAGCTTGTGTATCACCTGGTTTCCTCACAATCAATTGGCAGTTTTGGAAGCA D H A S L C I T W F P H N Q L A V L E A T M Q A C V S P G F L T I N W Q F W K H - P C K L V Y H L V S S Q S I G S F G S . . . . . . 71875 TCACTAAAAATGAAATCAATGTTGCCTGTAATGATAGAGTCACGGAACAATTATCTGTAC S L K M K S M L P V M I E S R N N Y L Y H - K - N Q C C L - - - S H G T I I C T I T K N E I N V A C N D R V T E Q L S V . . . . . . 71815 GAGTGAGCGTATAGGATGTATTGGAAACCATCGATTTTGTAGTTGTAGACAATTGCTTTA E - A Y R M Y W K P S I L - L - T I A L S E R I G C I G N H R F C S C R Q L L Y R V S V - D V L E T I D F V V V D N C F . . . . . . 71755 TCATCATTAATCCTCAATGCAACAACTTGTTCTTTTACTGGTCCTGCTCTGTTTTCAATA S S L I L N A T T C S F T G P A L F S I H H - S S M Q Q L V L L L V L L C F Q Y I I I N P Q C N N L F F Y W S C S V F N . . . . . . 71695 CCGATGTCCCTGATAACGAACCTTTCACCAGAAACACCAAGGGAGGTTGTATGCCATTTT P M S L I T N L S P E T P R E V V C H F R C P - - R T F H Q K H Q G R L Y A I L T D V P D N E P F T R N T K G G C M P F . . . . : . . 71635 ACTACACCGCCACCATTCTTACTCCCTTGTCACCCA : TGATTATGGTCTTGGTTGGCCCTT T T P P P F L L P C H P : - L W S W L A L L H R H H S Y S L V T H : D Y G L G W P F Y Y T A T I L T P L S P : M I M V L V G P . . . . . . 71086 CACCAATAAACACAACATTTGCCTGTCTTTTCAATTTCAATGTGTTCCTTGTATGTACCG H Q - T Q H L P V F S I S M C S L Y V P T N K H N I C L S F Q F Q C V P C M Y R S P I N T T F A C L F N F N V F L V C T . . . . . . 71026 GCCTTGATCAGGATAATGAAAGGAGTTGTATAGTTCATGAGGACAGCGTTAAGTTCTCCT A L I R I M K G V V - F M R T A L S S P P - S G - - K E L Y S S - G Q R - V L L G L D Q D N E R S C I V H E D S V K F S . . . . . . 70966 GAAATGGTCTTGTATTGTCCGTCACCACTTGCAGAAACCACAGCATTAGGCTTGGAGGGA E M V L Y C P S P L A E T T A L G L E G K W S C I V R H H L Q K P Q H - A W R E - N G L V L S V T T C R N H S I R L G G . . . . . . 70906 GAAATTTGAAGGAGCTTATGGCTACTGGCTTCAACAAACCAGTCACTATTTGATAACAAT E I - R S L W L L A S T N Q S L F D N N K F E G A Y G Y W L Q Q T S H Y L I T I R N L K E L M A T G F N K P V T I - - Q . . . . . . 70846 TTGCGGGTAAGGCCAGTGGTTTTTGTGATCGTTTCACCGAAAACTGTTGGCCATGGAAAG L R V R P V V F V I V S P K T V G H G K C G - G Q W F L - S F H R K L L A M E R F A G K A S G F C D R F T E N C W P W K . . . . . . 70786 AGCATTGATACTCAGCTCTTTCGTATTCAATATCTTCATCATTTTGTTGTGGGTTGCACT S I D T Q L F R I Q Y L H H F V V G C T A L I L S S F V F N I F I I L L W V A L E H - Y S A L S Y S I S S S F C C G L H . . . . . . 70726 CTGTTCTGATTTGATAAAACCATCTGAGCAAGTCTCTTCATAGGCAATCACAGTGCTAAG L F - F D K T I - A S L F I G N H S A K C S D L I K P S E Q V S S - A I T V L S S V L I - - N H L S K S L H R Q S Q C - . . . . . . 70666 CCATGTCTTGAGGTCTTCCACCACATCCTTGATCTTAGAGAAATCAAAGTTCTCAATCTT P C L E V F H H I L D L R E I K V L N L H V L R S S T T S L I L E K S K F S I L A M S - G L P P H P - S - R N Q S S Q S . . : . . . . 70606 AGCGATAGAGCGTCTTTGGT : CCCCAACAACTAGATTCTCACTCCTCCTCAC S D R A S L V : P N N - I L T P P H A I E R L W : S P T T R F S L L L - R - S V F G : P Q Q L D S H S S S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-10_AGS-2_PPS_1 (71801 71600,71110 70965) (frame '0'; 345 bp, 115 residues) 1 DVLETIDFVV VDNCFIIINP QCNNLFFYWS CSVFNTDVPD NEPFTRNTKG GCMPFYYTAT 61 ILTPLSPMIM VLVGPSPINT TFACLFNFNV FLVCTGLDQD NERSCIVHED SVKFS- >C01HBa0163B20.1-_PGL-10_AGS-2_PPS_2 (76611 76576,74693 74687,72320 72316,71956 71810) (frame '1'; 192 bp, 64 residues) 1 GLMSQFWITN PEQEVVFRLS LRSDHASLCI TWFPHNQLAV LEASLKMKSM LPVMIESRNN 61 YLYE- AGS-3 (71085 70587,70517 70488) SCR (e 0.836 d 0.210 a 0.885,e 0.500) Exon 1 71085 70587 ( 499 n); score: 0.836 Intron 1 70586 70518 ( 69 n); Pd: 0.210 Pa: 0.885 Exon 2 70517 70488 ( 30 n); score: 0.500 PGS (71085 70587,70517 70488) SGN-E331514- 3-phase translation of AGS-3 (-strand): . . . . . . 71085 ACCAATAAACACAACATTTGCCTGTCTTTTCAATTTCAATGTGTTCCTTGTATGTACCGG T N K H N I C L S F Q F Q C V P C M Y R P I N T T F A C L F N F N V F L V C T G Q - T Q H L P V F S I S M C S L Y V P . . . . . . 71025 CCTTGATCAGGATAATGAAAGGAGTTGTATAGTTCATGAGGACAGCGTTAAGTTCTCCTG P - S G - - K E L Y S S - G Q R - V L L L D Q D N E R S C I V H E D S V K F S - A L I R I M K G V V - F M R T A L S S P . . . . . . 70965 AAATGGTCTTGTATTGTCCGTCACCACTTGCAGAAACCACAGCATTAGGCTTGGAGGGAG K W S C I V R H H L Q K P Q H - A W R E N G L V L S V T T C R N H S I R L G G R E M V L Y C P S P L A E T T A L G L E G . . . . . . 70905 AAATTTGAAGGAGCTTATGGCTACTGGCTTCAACAAACCAGTCACTATTTGATAACAATT K F E G A Y G Y W L Q Q T S H Y L I T I N L K E L M A T G F N K P V T I - - Q F E I - R S L W L L A S T N Q S L F D N N . . . . . . 70845 TGCGGGTAAGGCCAGTGGTTTTTGTGATCGTTTCACCGAAAACTGTTGGCCATGGAAAGA C G - G Q W F L - S F H R K L L A M E R A G K A S G F C D R F T E N C W P W K E L R V R P V V F V I V S P K T V G H G K . . . . . . 70785 GCATTGATACTCAGCTCTTTCGTATTCAATATCTTCATCATTTTGTTGTGGGTTGCACTC A L I L S S F V F N I F I I L L W V A L H - Y S A L S Y S I S S S F C C G L H S S I D T Q L F R I Q Y L H H F V V G C T . . . . . . 70725 TGTTCTGATTTGATAAAACCATCTGAGCAAGTCTCTTCATAGGCAATCACAGTGCTAAGC C S D L I K P S E Q V S S - A I T V L S V L I - - N H L S K S L H R Q S Q C - A L F - F D K T I - A S L F I G N H S A K . . . . . . 70665 CATGTCTTGAGGTCTTCCACCACATCCTTGATCTTAGAGAAATCAAAGTTCTCAATCTTA H V L R S S T T S L I L E K S K F S I L M S - G L P P H P - S - R N Q S S Q S - P C L E V F H H I L D L R E I K V L N L . . : . . . 70605 GCGATAGAGCGTCTTTGGT : GCTGGCACCACAAGAACAGAAGCTATTCCA A I E R L W : C W H H K N R S Y S R - S V F G : A G T T R T E A I P S D R A S L V : L A P Q E Q K L F Maximal non-overlapping open reading frames (>= 64 codons): none AGS-4 (70600 70518) SCR (e 0.904) Exon 1 70600 70518 ( 83 n); score: 0.904 PGS (70600 70518) SGN-E331580- PGS (70600 70518) SGN-E333295- PGS (70600 70518) SGN-E330071- 3-phase translation of AGS-4 (-strand): . . . . . . 70600 AGAGCGTCTTTGGTGTAAGGATCACTGGCAGCTTTCTTAATCGGCTCGGTGTTTTTTGAG R A S L V - G S L A A F L I G S V F F E E R L W C K D H W Q L S - S A R C F L R S V F G V R I T G S F L N R L G V F - . . . 70540 GTCATTCTTGATGTCTGACACAG V I L D V - H S F L M S D T G H S - C L T Q Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-4 (+strand): . . . . . . 70518 CTGTGTCAGACATCAAGAATGACCTCAAAAAACACCGAGCCGATTAAGAAAGCTGCCAGT L C Q T S R M T S K N T E P I K K A A S C V R H Q E - P Q K T P S R L R K L P V V S D I K N D L K K H R A D - E S C Q . . . 70578 GATCCTTACACCAAAGACGCTCT D P Y T K D A I L T P K T L - S L H Q R R S Maximal non-overlapping open reading frames (>= 64 codons): none AGS-5 (73734 72931) SCR (e 0.861) Exon 1 73734 72931 ( 804 n); score: 0.861 PGS (73734 72931) SGN-E352898+ 3-phase translation of AGS-5 (-strand): . . . . . . 73734 TTTGTTAAATAAGTGGGTGTTCAGAATCAAGAGTGAACCAGATGGCAAAAGAAGGTTCAA F V K - V G V Q N Q E - T R W Q K K V Q L L N K W V F R I K S E P D G K R R F K C - I S G C S E S R V N Q M A K E G S . . . . . . 73674 GGCTCGTTTAGTGGTTAAAGGATATTCACAAAGGAAAGGTATTGATTATGCTTAAATATT G S F S G - R I F T K E R Y - L C L N I A R L V V K G Y S Q R K G I D Y A - I F R L V - W L K D I H K G K V L I M L K Y . . . . . . 73614 TTCTTCTGTTGTGAAGTTAGCCTCTATTCGAATTCTGTTGAGTGTTGTTGCATCGGAGAA F F C C E V S L Y S N S V E C C C I G E S S V V K L A S I R I L L S V V A S E N F L L L - S - P L F E F C - V L L H R R . . . . . . 73554 TTTGCATCTAGAGCATATGGATGTAAAAACAGTGTTTTTATATGGAGATATGGACAAAGA F A S R A Y G C K N S V F I W R Y G Q R L H L E H M D V K T V F L Y G D M D K E I C I - S I W M - K Q C F Y M E I W T K . . . . . . 73494 GATCTATATGCAGCAACCGGAAGGATTTGTAGTTCCAGGCAAGGAACACATGGTGTGCAA D L Y A A T G R I C S S R Q G T H G V Q I Y M Q Q P E G F V V P G K E H M V C K R S I C S N R K D L - F Q A R N T W C A . . . . . . 73434 GCTCACCAGGAGCTTGTATGGACTAAAGCAAGCACCAAGGCAGTGGTACAAGAAGTTTAA A H Q E L V W T K A S T K A V V Q E V - L T R S L Y G L K Q A P R Q W Y K K F N S S P G A C M D - S K H Q G S G T R S L . . . . . . 73374 CTCCTTCATGACCAAGGGTGGATTCTGCAAAGCTGAAAAGGATCCTTGTTGTTACTTCAA L L H D Q G W I L Q S - K G S L L L L Q S F M T K G G F C K A E K D P C C Y F K T P S - P R V D S A K L K R I L V V T S . . . . . . 73314 GAAATACACTGATTCATATGTCGTTCTACTCTTGTATATGGATGATATGTTGATTGTAAG E I H - F I C R S T L V Y G - Y V D C K K Y T D S Y V V L L L Y M D D M L I V R R N T L I H M S F Y S C I W M I C - L - . . . . . . 73254 ATCTAGTATGAGAGAGATTAACAATCTGAAGACAAGGTTGTCTACAGCATTTGAGATGAC I - Y E R D - Q S E D K V V Y S I - D D S S M R E I N N L K T R L S T A F E M T D L V - E R L T I - R Q G C L Q H L R - . . . . . . 73194 AGATTTGGGTCCAGCAAAATAGATTTTGGGGATGGAGATTTCTCGGGATAGATCTGTTGG R F G S S K I D F G D G D F S G - I C W D L G P A K - I L G M E I S R D R S V G Q I W V Q Q N R F W G W R F L G I D L L . . . . . . 73134 CACTTTAAATCTATCTCAGAAGTTGTACATTGAGAAGGTACTGAGCAGATTCAGGGTTAA H F K S I S E V V H - E G T E Q I Q G - T L N L S Q K L Y I E K V L S R F R V N A L - I Y L R S C T L R R Y - A D S G L . . . . . . 73074 TGATGCTAAACCCAGGACTACTCCATTGGCAAATCACTTTAAATTGTCAAAGGAGCAGTC - C - T Q D Y S I G K S L - I V K G A V D A K P R T T P L A N H F K L S K E Q S M M L N P G L L H W Q I T L N C Q R S S . . . . . . 73014 ACCCAAGACTTCCGAGGAGCGTGATCACATGGCACTTGTTCCATATGCTTCAGCAGTTGG T Q D F R G A - S H G T C S I C F S S W P K T S E E R D H M A L V P Y A S A V G H P R L P R S V I T W H L F H M L Q Q L . . . 72954 TAGTTTGATGTATGTTATAGTCTG - F D V C Y S L S L M Y V I V V V - C M L - S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-10_AGS-5_PPS_1 (73619 73173) (frame '2'; 444 bp, 148 residues) 1 IFSSVVKLAS IRILLSVVAS ENLHLEHMDV KTVFLYGDMD KEIYMQQPEG FVVPGKEHMV 61 CKLTRSLYGL KQAPRQWYKK FNSFMTKGGF CKAEKDPCCY FKKYTDSYVV LLLYMDDMLI 121 VRSSMREINN LKTRLSTAFE MTDLGPAK- >C01HBa0163B20.1-_PGL-10_AGS-5_PPS_2 (73172 72933) (frame '2'; 240 bp, 80 residues) 1 ILGMEISRDR SVGTLNLSQK LYIEKVLSRF RVNDAKPRTT PLANHFKLSK EQSPKTSEER 61 DHMALVPYAS AVGSLMYVIV 3-phase translation of AGS-5 (+strand): . . . . . . 72931 CAGACTATAACATACATCAAACTACCAACTGCTGAAGCATATGGAACAAGTGCCATGTGA Q T I T Y I K L P T A E A Y G T S A M - R L - H T S N Y Q L L K H M E Q V P C D D Y N I H Q T T N C - S I W N K C H V . . . . . . 72991 TCACGCTCCTCGGAAGTCTTGGGTGACTGCTCCTTTGACAATTTAAAGTGATTTGCCAAT S R S S E V L G D C S F D N L K - F A N H A P R K S W V T A P L T I - S D L P M I T L L G S L G - L L L - Q F K V I C Q . . . . . . 73051 GGAGTAGTCCTGGGTTTAGCATCATTAACCCTGAATCTGCTCAGTACCTTCTCAATGTAC G V V L G L A S L T L N L L S T F S M Y E - S W V - H H - P - I C S V P S Q C T W S S P G F S I I N P E S A Q Y L L N V . . . . . . 73111 AACTTCTGAGATAGATTTAAAGTGCCAACAGATCTATCCCGAGAAATCTCCATCCCCAAA N F - D R F K V P T D L S R E I S I P K T S E I D L K C Q Q I Y P E K S P S P K Q L L R - I - S A N R S I P R N L H P Q . . . . . . 73171 ATCTATTTTGCTGGACCCAAATCTGTCATCTCAAATGCTGTAGACAACCTTGTCTTCAGA I Y F A G P K S V I S N A V D N L V F R S I L L D P N L S S Q M L - T T L S S D N L F C W T Q I C H L K C C R Q P C L Q . . . . . . 73231 TTGTTAATCTCTCTCATACTAGATCTTACAATCAACATATCATCCATATACAAGAGTAGA L L I S L I L D L T I N I S S I Y K S R C - S L S Y - I L Q S T Y H P Y T R V E I V N L S H T R S Y N Q H I I H I Q E - . . . . . . 73291 ACGACATATGAATCAGTGTATTTCTTGAAGTAACAACAAGGATCCTTTTCAGCTTTGCAG T T Y E S V Y F L K - Q Q G S F S A L Q R H M N Q C I S - S N N K D P F Q L C R N D I - I S V F L E V T T R I L F S F A . . . . . . 73351 AATCCACCCTTGGTCATGAAGGAGTTAAACTTCTTGTACCACTGCCTTGGTGCTTGCTTT N P P L V M K E L N F L Y H C L G A C F I H P W S - R S - T S C T T A L V L A L E S T L G H E G V K L L V P L P W C L L . . . . . . 73411 AGTCCATACAAGCTCCTGGTGAGCTTGCACACCATGTGTTCCTTGCCTGGAACTACAAAT S P Y K L L V S L H T M C S L P G T T N V H T S S W - A C T P C V P C L E L Q I - S I Q A P G E L A H H V F L A W N Y K . . . . . . 73471 CCTTCCGGTTGCTGCATATAGATCTCTTTGTCCATATCTCCATATAAAAACACTGTTTTT P S G C C I - I S L S I S P Y K N T V F L P V A A Y R S L C P Y L H I K T L F L S F R L L H I D L F V H I S I - K H C F . . . . . . 73531 ACATCCATATGCTCTAGATGCAAATTCTCCGATGCAACAACACTCAACAGAATTCGAATA T S I C S R C K F S D A T T L N R I R I H P Y A L D A N S P M Q Q H S T E F E - Y I H M L - M Q I L R C N N T Q Q N S N . . . . . . 73591 GAGGCTAACTTCACAACAGAAGAAAATATTTAAGCATAATCAATACCTTTCCTTTGTGAA E A N F T T E E N I - A - S I P F L C E R L T S Q Q K K I F K H N Q Y L S F V N R G - L H N R R K Y L S I I N T F P L - . . . . . . 73651 TATCCTTTAACCACTAAACGAGCCTTGAACCTTCTTTTGCCATCTGGTTCACTCTTGATT Y P L T T K R A L N L L L P S G S L L I I L - P L N E P - T F F C H L V H S - F I S F N H - T S L E P S F A I W F T L D . . . 73711 CTGAACACCCACTTATTTAACAAA L N T H L F N K - T P T Y L T S E H P L I - Q Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-10_AGS-5_PPS_1 (73120 73323) (frame '1'; 201 bp, 67 residues) 1 DRFKVPTDLS REISIPKIYF AGPKSVISNA VDNLVFRLLI SLILDLTINI SSIYKSRTTY 61 ESVYFLK- AGS-6 (74726 74361) SCR (e 0.926) Exon 1 74726 74361 ( 366 n); score: 0.926 PGS (74726 74361) SGN-E306651- 3-phase translation of AGS-6 (-strand): . . . . . . 74726 CAGATTCTATGTTACCTTCATTGATGATTTCAGCAGGAAGGTATCGGTTTACTTCTTGAA Q I L C Y L H - - F Q Q E G I G L L L E R F Y V T F I D D F S R K V S V Y F L K D S M L P S L M I S A G R Y R F T S - . . . . . . 74666 GCATAAGTTAGATGTGTTTGCAACTTTCAAGAAGTGGAAAGCTGAAGTTGAGAATCAGAT A - V R C V C N F Q E V E S - S - E S D H K L D V F A T F K K W K A E V E N Q I S I S - M C L Q L S R S G K L K L R I R . . . . . . 74606 CGGTTTGAAAGTCAAATGCCTAAGGTCTGACAATGGAGGAGAGTATGACAAATCAGAGTT R F E S Q M P K V - Q W R R V - Q I R V G L K V K C L R S D N G G E Y D K S E F S V - K S N A - G L T M E E S M T N Q S . . . . . . 74546 CAAGGCATTCTGTGCAGTTGACGGAATCAGATTGATGAGAACAGTTCCTGGTGAGGCAAG Q G I L C S - R N Q I D E N S S W - G K K A F C A V D G I R L M R T V P G E A R S R H S V Q L T E S D - - E Q F L V R Q . . . . . . 74486 GCAGAATAGAATTGTTGAGAGGATGAACAGAACATTGAATGAGCTTGAAAGGAGTATGAG A E - N C - E D E Q N I E - A - K E Y E Q N R I V E R M N R T L N E L E R S M R G R I E L L R G - T E H - M S L K G V - . . . . . . 74426 GATACACTGTGGGCTGCCCAAAACACTTTGGGCGGATGTTGTGAGCAAAGTTGCATACTT D T L W A A Q N T L G G C C E Q S C I L I H C G L P K T L W A D V V S K V A Y L G Y T V G C P K H F G R M L - A K L H T . 74366 GATCAA D Q I - S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-10_AGS-6_PPS_1 (74725 74363) (frame '2'; 363 bp, 121 residues) 1 RFYVTFIDDF SRKVSVYFLK HKLDVFATFK KWKAEVENQI GLKVKCLRSD NGGEYDKSEF 61 KAFCAVDGIR LMRTVPGEAR QNRIVERMNR TLNELERSMR IHCGLPKTLW ADVVSKVAYL 121 I 3-phase translation of AGS-6 (+strand): . . . . . . 74361 TTGATCAAGTATGCAACTTTGCTCACAACATCCGCCCAAAGTGTTTTGGGCAGCCCACAG L I K Y A T L L T T S A Q S V L G S P Q - S S M Q L C S Q H P P K V F W A A H S D Q V C N F A H N I R P K C F G Q P T . . . . . . 74421 TGTATCCTCATACTCCTTTCAAGCTCATTCAATGTTCTGTTCATCCTCTCAACAATTCTA C I L I L L S S S F N V L F I L S T I L V S S Y S F Q A H S M F C S S S Q Q F Y V Y P H T P F K L I Q C S V H P L N N S . . . . . . 74481 TTCTGCCTTGCCTCACCAGGAACTGTTCTCATCAATCTGATTCCGTCAACTGCACAGAAT F C L A S P G T V L I N L I P S T A Q N S A L P H Q E L F S S I - F R Q L H R M I L P C L T R N C S H Q S D S V N C T E . . . . . . 74541 GCCTTGAACTCTGATTTGTCATACTCTCCTCCATTGTCAGACCTTAGGCATTTGACTTTC A L N S D L S Y S P P L S D L R H L T F P - T L I C H T L L H C Q T L G I - L S C L E L - F V I L S S I V R P - A F D F . . . . . . 74601 AAACCGATCTGATTCTCAACTTCAGCTTTCCACTTCTTGAAAGTTGCAAACACATCTAAC K P I - F S T S A F H F L K V A N T S N N R S D S Q L Q L S T S - K L Q T H L T Q T D L I L N F S F P L L E S C K H I - . . . . . . 74661 TTATGCTTCAAGAAGTAAACCGATACCTTCCTGCTGAAATCATCAATGAAGGTAACATAG L C F K K - T D T F L L K S S M K V T - Y A S R S K P I P S C - N H Q - R - H R L M L Q E V N R Y L P A E I I N E G N I . 74721 AATCTG N L I E S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-10_AGS-6_PPS_1 (74361 74612) (frame '1'; 249 bp, 83 residues) 1 LIKYATLLTT SAQSVLGSPQ CILILLSSSF NVLFILSTIL FCLASPGTVL INLIPSTAQN 61 ALNSDLSYSP PLSDLRHLTF KPI- AGS-7 (76287 75748) SCR (e 0.880) Exon 1 76287 75748 ( 540 n); score: 0.880 PGS (76287 75748) SGN-E548332+ PGS (76287 75749) SGN-E540110+ PGS (76287 75755) SGN-E540114- PGS (76287 75756) SGN-E540107- PGS (76287 75802) SGN-E286267+ PGS (76039 75837) SGN-E257955- 3-phase translation of AGS-7 (-strand): . . . . . . 76287 TCTCTTTCTTTTAAAAGTTCTTGTGTTTTCATTCATCTAGTGTGTGTGCTTTAATTCGAT S L S F K S S C V F I H L V C V L - F D L F L L K V L V F S F I - C V C F N S I S F F - K F L C F H S S S V C A L I R . . . . . . 76227 CCTAACAACTGGCATCAGAGATAAGGAGATACAACACGATCACTGAAGATGGATAGTTTG P N N W H Q R - G D T T R S L K M D S L L T T G I R D K E I Q H D H - R W I V - S - Q L A S E I R R Y N T I T E D G - F . . . . . . 76167 AAGCTTGGAATCGAGAAGTTTGATGGATCCGATTTTAGTTTCTGGAAGATGCAGATCAAA K L G I E K F D G S D F S F W K M Q I K S L E S R S L M D P I L V S G R C R S K E A W N R E V - W I R F - F L E D A D Q . . . . . . 76107 GATTATCTGTACCAGAAAGATCTTCATAAACCGTTGACCAGGGTGAAACCGGAATCCATG D Y L Y Q K D L H K P L T R V K P E S M I I C T R K I F I N R - P G - N R N P - R L S V P E R S S - T V D Q G E T G I H . . . . . . 76047 ACGGAGGAGAAGTGGAAACTCAAGGATCGCCAGGCTCTAGGGTTGATCCGGTTGACTTTG T E E K W K L K D R Q A L G L I R L T L R R R S G N S R I A R L - G - S G - L C D G G E V E T Q G S P G S R V D P V D F . . . . . . 75987 TCAAGAAACGTGGCGTTCAACATTGTGAAGACGTTCGGTCTGTTGAAGGAACTGTCAAAC S R N V A F N I V K T F G L L K E L S N Q E T W R S T L - R R S V C - R N C Q T V K K R G V Q H C E D V R S V E G T V K . . . . . . 75927 ATGTATGAAAAACCATCGGCTATGAACAAGGTATATTTGATGCGTAGATTGTTCAATTTA M Y E K P S A M N K V Y L M R R L F N L C M K N H R L - T R Y I - C V D C S I Y H V - K T I G Y E Q G I F D A - I V Q F . . . . . . 75867 CAGATGTATGAGAATGGATCTGTTTCTGATCATATAAACGAGTTTAATATGATTGTGAGT Q M Y E N G S V S D H I N E F N M I V S R C M R M D L F L I I - T S L I - L - V T D V - E W I C F - S Y K R V - Y D C E . . . . . . 75807 CAACTCAATTCTGTGGATATCAATTTCGAAGATGAAATTAAGGCGTTGATTTTGTTGTCA Q L N S V D I N F E D E I K A L I L L S N S I L W I S I S K M K L R R - F C C S T Q F C G Y Q F R R - N - G V D F V V Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-10_AGS-7_PPS_1 (76203 75748) (frame '1'; 456 bp, 152 residues) 1 GDTTRSLKMD SLKLGIEKFD GSDFSFWKMQ IKDYLYQKDL HKPLTRVKPE SMTEEKWKLK 61 DRQALGLIRL TLSRNVAFNI VKTFGLLKEL SNMYEKPSAM NKVYLMRRLF NLQMYENGSV 121 SDHINEFNMI VSQLNSVDIN FEDEIKALIL LS 3-phase translation of AGS-7 (+strand): . . . . . . 75748 TGACAACAAAATCAACGCCTTAATTTCATCTTCGAAATTGATATCCACAGAATTGAGTTG - Q Q N Q R L N F I F E I D I H R I E L D N K I N A L I S S S K L I S T E L S - T T K S T P - F H L R N - Y P Q N - V . . . . . . 75808 ACTCACAATCATATTAAACTCGTTTATATGATCAGAAACAGATCCATTCTCATACATCTG T H N H I K L V Y M I R N R S I L I H L L T I I L N S F I - S E T D P F S Y I C D S Q S Y - T R L Y D Q K Q I H S H T S . . . . . . 75868 TAAATTGAACAATCTACGCATCAAATATACCTTGTTCATAGCCGATGGTTTTTCATACAT - I E Q S T H Q I Y L V H S R W F F I H K L N N L R I K Y T L F I A D G F S Y M V N - T I Y A S N I P C S - P M V F H T . . . . . . 75928 GTTTGACAGTTCCTTCAACAGACCGAACGTCTTCACAATGTTGAACGCCACGTTTCTTGA V - Q F L Q Q T E R L H N V E R H V S - F D S S F N R P N V F T M L N A T F L D C L T V P S T D R T S S Q C - T P R F L . . . . . . 75988 CAAAGTCAACCGGATCAACCCTAGAGCCTGGCGATCCTTGAGTTTCCACTTCTCCTCCGT Q S Q P D Q P - S L A I L E F P L L L R K V N R I N P R A W R S L S F H F S S V T K S T G S T L E P G D P - V S T S P P . . . . . . 76048 CATGGATTCCGGTTTCACCCTGGTCAACGGTTTATGAAGATCTTTCTGGTACAGATAATC H G F R F H P G Q R F M K I F L V Q I I M D S G F T L V N G L - R S F W Y R - S S W I P V S P W S T V Y E D L S G T D N . . . . . . 76108 TTTGATCTGCATCTTCCAGAAACTAAAATCGGATCCATCAAACTTCTCGATTCCAAGCTT F D L H L P E T K I G S I K L L D S K L L I C I F Q K L K S D P S N F S I P S F L - S A S S R N - N R I H Q T S R F Q A . . . . . . 76168 CAAACTATCCATCTTCAGTGATCGTGTTGTATCTCCTTATCTCTGATGCCAGTTGTTAGG Q T I H L Q - S C C I S L S L M P V V R K L S I F S D R V V S P Y L - C Q L L G S N Y P S S V I V L Y L L I S D A S C - . . . . . . 76228 ATCGAATTAAAGCACACACACTAGATGAATGAAAACACAAGAACTTTTAAAAGAAAGAGA I E L K H T H - M N E N T R T F K R K R S N - S T H T R - M K T Q E L L K E R D R I K A H T L D E - K H K N F - K K E Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-10_AGS-7_PPS_1 (75839 76084) (frame '2'; 243 bp, 81 residues) 1 SETDPFSYIC KLNNLRIKYT LFIADGFSYM FDSSFNRPNV FTMLNATFLD KVNRINPRAW 61 RSLSFHFSSV MDSGFTLVNG L- PGL 11 (- strand): 81134 80349 AGS-1 (81134 80349) SCR (e 0.635) Exon 1 81134 80349 ( 786 n); score: 0.635 PGS (81017 80349) SGN-E389503- PGS (81134 80755) SGN-E389994+ PGS (81134 80755) SGN-E235464+ 3-phase translation of AGS-1 (-strand): . . . . . . 81134 ATAAAGAAATTAATGATACCGAAGCTGTTAGGATATGATAATCAAGAGGTGATCTAGACT I K K L M I P K L L G Y D N Q E V I - T - R N - - Y R S C - D M I I K R - S R L K E I N D T E A V R I - - S R G D L D . . . . . . 81074 CAGGTAATGACGTTAGGTTATTCCTGATCATTGCACAGCAAACCCAATGAGAGTCTTAAA Q V M T L G Y S - S L H S K P N E S L K R - - R - V I P D H C T A N P M R V L N S G N D V R L F L I I A Q Q T Q - E S - . . . . . . 81014 CTACATCCTAGGTATAGGTGGTGTCCACACTGGCCTATGAATGAAATGAAATGAAGTATG L H P R Y R W C P H W P M N E M K - S M Y I L G I G G V H T G L - M K - N E V C T T S - V - V V S T L A Y E - N E M K Y . . . . . . 80954 TATGAATGGATGAAGCAGACTCTATGTTTTCTAATGAAGACTCCCTAGTTTAGGTCACAT Y E W M K Q T L C F L M K T P - F R S H M N G - S R L Y V F - - R L P S L G H I V - M D E A D S M F S N E D S L V - V T . . . . . . 80894 ATGTTGAGCCCTCATTTTGAAACGTCTAAATACCAAGTCCATGATGACAAGGTCTCATGA M L S P H F E T S K Y Q V H D D K V S - C - A L I L K R L N T K S M M T R S H D Y V E P S F - N V - I P S P - - Q G L M . . . . . . 80834 CATATGAATGAATAATATGAAAGAAGTTATGTGTTATATGTTATGTGCTATGATATGTAT H M N E - Y E R S Y V L Y V M C Y D M Y I - M N N M K E V M C Y M L C A M I C I T Y E - I I - K K L C V I C Y V L - Y V . . . . . . 80774 AAAGATGTTATGTGTTGTGTGCAATACGATTATTATAATGATGCATGTTACTCTCATGGC K D V M C C V Q Y D Y Y N D A C Y S H G K M L C V V C N T I I I M M H V T L M A - R C Y V L C A I R L L - - C M L L S W . . . . . . 80714 ATAACCTTCCTAACTCAATTTGGAAAGTTCACTAACTTTCGTAACCTCAATTTAGCATGT I T F L T Q F G K F T N F R N L N L A C - P S - L N L E S S L T F V T S I - H V H N L P N S I W K V H - L S - P Q F S M . . . . . . 80654 CCACTGACTTAACCTTCCATAAATCATGTTTTTAGGAAAGAGTTATTCCTTGTTATGCAT P L T - P S I N H V F R K E L F L V M H H - L N L P - I M F L G K S Y S L L C M S T D L T F H K S C F - E R V I P C Y A . . . . . . 80594 GTGCTTGGTGTGTTCTTGAAGATACGCATACTTAGTACAAGTGTTAGTTCCATACAAATA V L G V F L K I R I L S T S V S S I Q I C L V C S - R Y A Y L V Q V L V P Y K Y C A W C V L E D T H T - Y K C - F H T N . . . . . . 80534 TCTACTTTTAGGTGCAGGCACAGGTGGGCGTAGAGCTATAGGTTCGTTGTTGCTGCTATC S T F R C R H R W A - S Y R F V V A A I L L L G A G T G G R R A I G S L L L L S I Y F - V Q A Q V G V E L - V R C C C Y . . . . . . 80474 CGGACGTCAGCATTCATTCGGAGTTTGGTAGGTCCTCGTGCTTTTGAGGATGCTACTGTA R T S A F I R S L V G P R A F E D A T V G R Q H S F G V W - V L V L L R M L L Y P D V S I H S E F G R S S C F - G C Y C . . . . . . 80414 TTACATTCTTGCGTAGTTTTTGAATTGAGCTAGCGAAGCATGTTCCACTAGCGTTTCTTT L H S C V V F E L S - R S M F H - R F F Y I L A - F L N - A S E A C S T S V S F I T F L R S F - I E L A K H V P L A F L . 80354 CCTGTT P V L S C Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 80349 AACAGGAAAGAAACGCTAGTGGAACATGCTTCGCTAGCTCAATTCAAAAACTACGCAAGA N R K E T L V E H A S L A Q F K N Y A R T G K K R - W N M L R - L N S K T T Q E Q E R N A S G T C F A S S I Q K L R K . . . . . . 80409 ATGTAATACAGTAGCATCCTCAAAAGCACGAGGACCTACCAAACTCCGAATGAATGCTGA M - Y S S I L K S T R T Y Q T P N E C - C N T V A S S K A R G P T K L R M N A D N V I Q - H P Q K H E D L P N S E - M L . . . . . . 80469 CGTCCGGATAGCAGCAACAACGAACCTATAGCTCTACGCCCACCTGTGCCTGCACCTAAA R P D S S N N E P I A L R P P V P A P K V R I A A T T N L - L Y A H L C L H L K T S G - Q Q Q R T Y S S T P T C A C T - . . . . . . 80529 AGTAGATATTTGTATGGAACTAACACTTGTACTAAGTATGCGTATCTTCAAGAACACACC S R Y L Y G T N T C T K Y A Y L Q E H T V D I C M E L T L V L S M R I F K N T P K - I F V W N - H L Y - V C V S S R T H . . . . . . 80589 AAGCACATGCATAACAAGGAATAACTCTTTCCTAAAAACATGATTTATGGAAGGTTAAGT K H M H N K E - L F P K N M I Y G R L S S T C I T R N N S F L K T - F M E G - V Q A H A - Q G I T L S - K H D L W K V K . . . . . . 80649 CAGTGGACATGCTAAATTGAGGTTACGAAAGTTAGTGAACTTTCCAAATTGAGTTAGGAA Q W T C - I E V T K V S E L S K L S - E S G H A K L R L R K L V N F P N - V R K S V D M L N - G Y E S - - T F Q I E L G . . . . . . 80709 GGTTATGCCATGAGAGTAACATGCATCATTATAATAATCGTATTGCACACAACACATAAC G Y A M R V T C I I I I I V L H T T H N V M P - E - H A S L - - S Y C T Q H I T R L C H E S N M H H Y N N R I A H N T - . . . . . . 80769 ATCTTTATACATATCATAGCACATAACATATAACACATAACTTCTTTCATATTATTCATT I F I H I I A H N I - H I T S F I L F I S L Y I S - H I T Y N T - L L S Y Y S F H L Y T Y H S T - H I T H N F F H I I H . . . . . . 80829 CATATGTCATGAGACCTTGTCATCATGGACTTGGTATTTAGACGTTTCAAAATGAGGGCT H M S - D L V I M D L V F R R F K M R A I C H E T L S S W T W Y L D V S K - G L S Y V M R P C H H G L G I - T F Q N E G . . . . . . 80889 CAACATATGTGACCTAAACTAGGGAGTCTTCATTAGAAAACATAGAGTCTGCTTCATCCA Q H M - P K L G S L H - K T - S L L H P N I C D L N - G V F I R K H R V C F I H S T Y V T - T R E S S L E N I E S A S S . . . . . . 80949 TTCATACATACTTCATTTCATTTCATTCATAGGCCAGTGTGGACACCACCTATACCTAGG F I H T S F H F I H R P V W T P P I P R S Y I L H F I S F I G Q C G H H L Y L G I H T Y F I S F H S - A S V D T T Y T - . . . . . . 81009 ATGTAGTTTAAGACTCTCATTGGGTTTGCTGTGCAATGATCAGGAATAACCTAACGTCAT M - F K T L I G F A V Q - S G I T - R H C S L R L S L G L L C N D Q E - P N V I D V V - D S H W V C C A M I R N N L T S . . . . . . 81069 TACCTGAGTCTAGATCACCTCTTGATTATCATATCCTAACAGCTTCGGTATCATTAATTT Y L S L D H L L I I I S - Q L R Y H - F T - V - I T S - L S Y P N S F G I I N F L P E S R S P L D Y H I L T A S V S L I . 81129 CTTTAT L Y F S L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 12 (+ strand): 82631 83198 AGS-1 (82631 83198) SCR (e 0.866) Exon 1 82631 83198 ( 568 n); score: 0.866 PGS (82631 83198) SGN-E548992+ PGS (82661 83181) SGN-E345632+ 3-phase translation of AGS-1 (+strand): . . . . . . 82631 AGGTAGTGGGTTTGATGCCCACTCTTCACATTTTATTTTCTCCTTTATTTTCCTCCTAAC R - W V - C P L F T F Y F L L Y F P P N G S G F D A H S S H F I F S F I F L L T V V G L M P T L H I L F S P L F S S - . . . . . . 82691 TCTCTCATCCATTCAAGAGGTTGTGGGTTTGATCCCCACTTTCCACATTTTATTTTTACT S L I H S R G C G F D P H F P H F I F T L S S I Q E V V G L I P T F H I L F L L L S H P F K R L W V - S P L S T F Y F Y . . . . . . 82751 TCTTTATTTTCGTGATTTTTAACATGTTGAGGTAACGGGTTCAATCCTCCATTACCTCAC S L F S - F L T C - G N G F N P P L P H L Y F R D F - H V E V T G S I L H Y L T F F I F V I F N M L R - R V Q S S I T S . . . . . . 82811 TTGTTTTAATTTATTTTTTTTCAATATTTTGAACCCTCTTTGCTGACAAAAATTCATCAA L F - F I F F Q Y F E P S L L T K I H Q C F N L F F F N I L N P L C - Q K F I N L V L I Y F F S I F - T L F A D K N S S . . . . . . 82871 TAGAAACTGGAAATTTTCTTTTAATTTTTCAGCATCCTTTTATCAAGTTACACCTTGGTT - K L E I F F - F F S I L L S S Y T L V R N W K F S F N F S A S F Y Q V T P W F I E T G N F L L I F Q H P F I K L H L G . . . . . . 82931 CATAGGGGAATTTTGTAGTGCATTTAGAACGTTTTAGGTGTGTCTTCATGTATTCATTTA H R G I L - C I - N V L G V S S C I H L I G E F C S A F R T F - V C L H V F I - S - G N F V V H L E R F R C V F M Y S F . . . . . . 82991 GCCAAGATATTATCCCTCAAATCAGCCACATTTCAACTATATAAACATCACATTTATATC A K I L S L K S A T F Q L Y K H H I Y I P R Y Y P S N Q P H F N Y I N I T F I S S Q D I I P Q I S H I S T I - T S H L Y . . . . . . 83051 AACATGTGTATACATGTGTAGATGAAATATATAGAACTATCATGCCATTTCAACTCCTAA N M C I H V - M K Y I E L S C H F N S - T C V Y M C R - N I - N Y H A I S T P K Q H V Y T C V D E I Y R T I M P F Q L L . . . . . . 83111 ACCATGAACAATACCCACGACAATAGACACATACACACGTAGTTACATTTTCAGAAATAT T M N N T H D N R H I H T - L H F Q K Y P - T I P T T I D T Y T R S Y I F R N I N H E Q Y P R Q - T H T H V V T F S E I . . . 83171 CAACATAAGTCACATAATTCCAAACCTA Q H K S H N S K P N I S H I I P N L S T - V T - F Q T Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 83198 TAGGTTTGGAATTATGTGACTTATGTTGATATTTCTGAAAATGTAACTACGTGTGTATGT - V W N Y V T Y V D I S E N V T T C V C R F G I M - L M L I F L K M - L R V Y V G L E L C D L C - Y F - K C N Y V C M . . . . . . 83138 GTCTATTGTCGTGGGTATTGTTCATGGTTTAGGAGTTGAAATGGCATGATAGTTCTATAT V Y C R G Y C S W F R S - N G M I V L Y S I V V G I V H G L G V E M A - - F Y I C L L S W V L F M V - E L K W H D S S I . . . . . . 83078 ATTTCATCTACACATGTATACACATGTTGATATAAATGTGATGTTTATATAGTTGAAATG I S S T H V Y T C - Y K C D V Y I V E M F H L H M Y T H V D I N V M F I - L K C Y F I Y T C I H M L I - M - C L Y S - N . . . . . . 83018 TGGCTGATTTGAGGGATAATATCTTGGCTAAATGAATACATGAAGACACACCTAAAACGT W L I - G I I S W L N E Y M K T H L K R G - F E G - Y L G - M N T - R H T - N V V A D L R D N I L A K - I H E D T P K T . . . . . . 82958 TCTAAATGCACTACAAAATTCCCCTATGAACCAAGGTGTAACTTGATAAAAGGATGCTGA S K C T T K F P Y E P R C N L I K G C - L N A L Q N S P M N Q G V T - - K D A E F - M H Y K I P L - T K V - L D K R M L . . . . . . 82898 AAAATTAAAAGAAAATTTCCAGTTTCTATTGATGAATTTTTGTCAGCAAAGAGGGTTCAA K I K R K F P V S I D E F L S A K R V Q K L K E N F Q F L L M N F C Q Q R G F K K N - K K I S S F Y - - I F V S K E G S . . . . . . 82838 AATATTGAAAAAAAATAAATTAAAACAAGTGAGGTAATGGAGGATTGAACCCGTTACCTC N I E K K - I K T S E V M E D - T R Y L I L K K N K L K Q V R - W R I E P V T S K Y - K K I N - N K - G N G G L N P L P . . . . . . 82778 AACATGTTAAAAATCACGAAAATAAAGAAGTAAAAATAAAATGTGGAAAGTGGGGATCAA N M L K I T K I K K - K - N V E S G D Q T C - K S R K - R S K N K M W K V G I K Q H V K N H E N K E V K I K C G K W G S . . . . . . 82718 ACCCACAACCTCTTGAATGGATGAGAGAGTTAGGAGGAAAATAAAGGAGAAAATAAAATG T H N L L N G - E S - E E N K G E N K M P T T S - M D E R V R R K I K E K I K C N P Q P L E W M R E L G G K - R R K - N . . . 82658 TGAAGAGTGGGCATCAAACCCACTACCT - R V G I K P T T E E W A S N P L P V K S G H Q T H Y Maximal non-overlapping open reading frames (>= 64 codons): none PGL 13 (+ strand): 83835 84502 AGS-1 (83835 84263,84368 84502) SCR (e 0.825 d 0.000 a 0.000,e 0.852) Exon 1 83835 84263 ( 429 n); score: 0.825 Intron 1 84264 84367 ( 104 n); Pd: 0.000 Pa: 0.000 Exon 2 84368 84502 ( 135 n); score: 0.852 PGS (83835 84263,84368 84502) SGN-E356167+ 3-phase translation of AGS-1 (+strand): . . . . . . 83835 TTACATTATCTCCCCCTTAGGAACATTCGTCCCCGAATGACACTACTATTACACATCAAA L H Y L P L R N I R P R M T L L L H I K Y I I S P L G T F V P E - H Y Y Y T S K T L S P P - E H S S P N D T T I T H Q . . . . . . 83895 ATGTCAATCAGATCATAACTTAATCGCCATGTACAGTCTGCCAATAGCAACAAAATACCA M S I R S - L N R H V Q S A N S N K I P C Q S D H N L I A M Y S L P I A T K Y Q N V N Q I I T - S P C T V C Q - Q Q N T . . . . . . 83955 AGAGATAAGTAACTATAGCCTTACGAGTAGGAAGTCTAACCTCAAGAGCTGAAAAGATGA R D K - L - P Y E - E V - P Q E L K R - E I S N Y S L T S R K S N L K S - K D E K R - V T I A L R V G S L T S R A E K M . . . . . . 84015 GGATAACAGGATCTCATGTCGGCCTCAGCCTCCCACATAGCACCCTCAACAAGATGATTT G - Q D L M S A S A S H I A P S T R - F D N R I S C R P Q P P T - H P Q Q D D F R I T G S H V G L S L P H S T L N K M I . . . . . . 84075 CTCCACAATACATTCACTGTGGCAATCTTCTTGTTCCTCAGCCTTTTGACCTGTCTGTCT L H N T F T V A I F L F L S L L T C L S S T I H S L W Q S S C S S A F - P V C L S P Q Y I H C G N L L V P Q P F D L S V . . . . . . 84135 AAGATCTCAACAAGTACATCCTCATAAGACAAGTCTTCACCAACCCCCTAACCTTCAATA K I S T S T S S - D K S S P T P - P S I R S Q Q V H P H K T S L H Q P P N L Q - - D L N K Y I L I R Q V F T N P L T F N . . . . . . 84195 GGTAGCATTGATGTTGGATCACCTAGGCACTTCTTCAACATAGAGACATGAAAGACTGGA G S I D V G S P R H F F N I E T - K T G V A L M L D H L G T S S T - R H E R L D R - H - C W I T - A L L Q H R D M K D W . : . . . . . 84255 TGAACAGAA : TCTCATCACCCCTTTCATAGGAGATATCTTCAAGTAAGCCAGGTCACAAAC - T E : S H H P F H R R Y L Q V S Q V T N E Q N : L I T P F I G D I F K - A R S Q T M N R : I S S P L S - E I S S S K P G H K . . . . . . 84419 ATTAATTTCTAAGGGCCACTTTCTGTTATCTGGATATGATTTCTGTCGGCTGTAAGCAGT I N F - G P L S V I W I - F L S A V S S L I S K G H F L L S G Y D F C R L - A V H - F L R A T F C Y L D M I S V G C K Q . . . 84479 AGCCAACTTGTCCCTAATCACTCT S Q L V P N H S A N L S L I T - P T C P - S L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 14 (+ strand): 91369 91878 AGS-1 (91369 91878) SCR (e 0.915) Exon 1 91369 91878 ( 510 n); score: 0.915 PGS (91369 91878) SGN-E548992+ PGS (91372 91848) SGN-E345632+ 3-phase translation of AGS-1 (+strand): . . . . . . 91369 TTCCTCCTTACTCTCTCATCCATTCAAGAGGTTGTGGGTTCAATCCCCACTTTCCACATT F L L T L S S I Q E V V G S I P T F H I S S L L S H P F K R L W V Q S P L S T F P P Y S L I H S R G C G F N P H F P H . . . . . . 91429 TTATATTTACTTCTTTATTTTCATGGTTTTTAACATGGTGAAGTCACGGGTTCAATCCTG L Y L L L Y F H G F - H G E V T G S I L Y I Y F F I F M V F N M V K S R V Q S C F I F T S L F S W F L T W - S H G F N P . . . . . . 91489 CATGACCTCACTTGTTTTAATGTAAATTTTTTCAACATTTTGAACCCTCTTTGCTGACCA H D L T C F N V N F F N I L N P L C - P M T S L V L M - I F S T F - T L F A D Q A - P H L F - C K F F Q H F E P S L L T . . . . . . 91549 AAATTCATCAATAGAAGCTGGAAATTTTCTTTTAATTTTTCAGCATCCTTTCATCAAGTT K F I N R S W K F S F N F S A S F H Q V N S S I E A G N F L L I F Q H P F I K L K I H Q - K L E I F F - F F S I L S S S . . . . . . 91609 ACACCTTAGTTCTTAGGGGAATTTCGTAGTGCATTTAGAACGTTTTAGGTGTGTCTTCAT T P - F L G E F R S A F R T F - V C L H H L S S - G N F V V H L E R F R C V F M Y T L V L R G I S - C I - N V L G V S S . . . . . . 91669 GTATTCGTTTAGCCAAGACATTATCCATCAAATCAGCCACATTTCAACTCATATGAACAT V F V - P R H Y P S N Q P H F N S Y E H Y S F S Q D I I H Q I S H I S T H M N I C I R L A K T L S I K S A T F Q L I - T . . . . . . 91729 CACATTTACATCAACATGTGTATATGAAATATAAAGAACTATCATGCCATTTCAACTCCT H I Y I N M C I - N I K N Y H A I S T P T F T S T C V Y E I - R T I M P F Q L L S H L H Q H V Y M K Y K E L S C H F N S . . . . . . 91789 AAACCATGAACAATATCCACGGCAACAGACACATACACACGTAGTTACATTTTCGGAAAC K P - T I S T A T D T Y T R S Y I F G N N H E Q Y P R Q Q T H T H V V T F S E T - T M N N I H G N R H I H T - L H F R K . . . 91849 GTCAACATAAGTCACATAATTTCAAACATA V N I S H I I S N I S T - V T - F Q T R Q H K S H N F K H Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 91878 TATGTTTGAAATTATGTGACTTATGTTGACGTTTCCGAAAATGTAACTACGTGTGTATGT Y V - N Y V T Y V D V S E N V T T C V C M F E I M - L M L T F P K M - L R V Y V C L K L C D L C - R F R K C N Y V C M . . . . . . 91818 GTCTGTTGCCGTGGATATTGTTCATGGTTTAGGAGTTGAAATGGCATGATAGTTCTTTAT V C C R G Y C S W F R S - N G M I V L Y S V A V D I V H G L G V E M A - - F F I C L L P W I L F M V - E L K W H D S S L . . . . . . 91758 ATTTCATATACACATGTTGATGTAAATGTGATGTTCATATGAGTTGAAATGTGGCTGATT I S Y T H V D V N V M F I - V E M W L I F H I H M L M - M - C S Y E L K C G - F Y F I Y T C - C K C D V H M S - N V A D . . . . . . 91698 TGATGGATAATGTCTTGGCTAAACGAATACATGAAGACACACCTAAAACGTTCTAAATGC - W I M S W L N E Y M K T H L K R S K C D G - C L G - T N T - R H T - N V L N A L M D N V L A K R I H E D T P K T F - M . . . . . . 91638 ACTACGAAATTCCCCTAAGAACTAAGGTGTAACTTGATGAAAGGATGCTGAAAAATTAAA T T K F P - E L R C N L M K G C - K I K L R N S P K N - G V T - - K D A E K L K H Y E I P L R T K V - L D E R M L K N - . . . . . . 91578 AGAAAATTTCCAGCTTCTATTGATGAATTTTGGTCAGCAAAGAGGGTTCAAAATGTTGAA R K F P A S I D E F W S A K R V Q N V E E N F Q L L L M N F G Q Q R G F K M L K K K I S S F Y - - I L V S K E G S K C - . . . . . . 91518 AAAATTTACATTAAAACAAGTGAGGTCATGCAGGATTGAACCCGTGACTTCACCATGTTA K I Y I K T S E V M Q D - T R D F T M L K F T L K Q V R S C R I E P V T S P C - K N L H - N K - G H A G L N P - L H H V . . . . . . 91458 AAAACCATGAAAATAAAGAAGTAAATATAAAATGTGGAAAGTGGGGATTGAACCCACAAC K T M K I K K - I - N V E S G D - T H N K P - K - R S K Y K M W K V G I E P T T K N H E N K E V N I K C G K W G L N P Q . . . 91398 CTCTTGAATGGATGAGAGAGTAAGGAGGAA L L N G - E S K E E S - M D E R V R R P L E W M R E - G G Maximal non-overlapping open reading frames (>= 64 codons): none PGL 15 (+ strand): 108057 109889 AGS-1 (108057 109889) SCR (e 0.977) Exon 1 108057 109889 (1833 n); score: 0.977 PGS (108057 108640) SGN-E333295+ PGS (108057 108528) SGN-E330837+ PGS (108060 108712) SGN-E332231+ PGS (108060 108617) SGN-E331580+ PGS (108062 108880) SGN-E334509+ PGS (108063 108879) SGN-E334504+ PGS (108063 108854) SGN-E547512+ PGS (108063 108829) SGN-E334024+ PGS (108063 108753) SGN-E332090+ PGS (108063 108528) SGN-E331435+ PGS (108064 108809) SGN-E332545+ PGS (108064 108804) SGN-E331950+ PGS (108064 108776) SGN-E334152+ PGS (108064 108776) SGN-E334584+ PGS (108064 108740) SGN-E332023+ PGS (108064 108528) SGN-E332788+ PGS (108065 108730) SGN-E330458+ PGS (108066 108705) SGN-E330049+ PGS (108066 108641) SGN-E330071+ PGS (108068 108942) SGN-E378573+ PGS (108068 108889) SGN-E334554+ PGS (108068 108719) SGN-E374064+ PGS (108083 108784) SGN-E333363+ PGS (108091 108641) SGN-E332731+ PGS (108101 108751) SGN-E334715+ PGS (108126 108891) SGN-E546809+ PGS (108137 108679) SGN-E332238+ PGS (108145 108784) SGN-E329360+ PGS (108156 108891) SGN-E546845+ PGS (108172 108893) SGN-E331929+ PGS (108181 108963) SGN-E333795+ PGS (108181 108892) SGN-E332713+ PGS (108181 108892) SGN-E332866+ PGS (108181 108787) SGN-E333056+ PGS (108185 108975) SGN-E333892+ PGS (108185 108974) SGN-E333848+ PGS (108185 108892) SGN-E333232+ PGS (108198 108977) SGN-E546751+ PGS (108229 108642) SGN-E332772+ PGS (108362 108797) SGN-E326012+ PGS (108467 109150) SGN-E332551+ PGS (108467 109124) SGN-E332650+ PGS (108467 109124) SGN-E334702+ PGS (108467 109116) SGN-E334236+ PGS (108467 108879) SGN-E332787+ PGS (108511 109042) SGN-E331514+ PGS (108549 109105) SGN-E331151+ PGS (108584 109276) SGN-E333376+ PGS (108584 109112) SGN-E333032+ PGS (108658 109418) SGN-E332184+ PGS (108658 109414) SGN-E331978+ PGS (108787 109429) SGN-E332171+ PGS (108787 109415) SGN-E332127+ PGS (108824 109791) SGN-E378571+ PGS (108824 109505) SGN-E374055+ PGS (109144 109889) SGN-E547511- PGS (109168 109889) SGN-E374054- PGS (109200 109889) SGN-E549438- PGS (109264 109889) SGN-E374063- PGS (109452 109889) SGN-E226303- PGS (109483 109889) SGN-E226674- PGS (109513 109889) SGN-E220264- PGS (109555 109889) SGN-E216887- PGS (109583 109889) SGN-E220168- PGS (109607 109889) SGN-E224767- PGS (109621 109889) SGN-E224547- 3-phase translation of AGS-1 (+strand): . . . . . . 108057 TAAACACAGCCTTCAATAAAACCCCTCTGAGTTCTTCACTTACAAGAAGAACCATAGGGG - T Q P S I K P L - V L H L Q E E P - G K H S L Q - N P S E F F T Y K K N H R G N T A F N K T P L S S S L T R R T I G . . . . . . 108117 TTGTTTCATAGGGAACTCCCCCCATAAAAAAAATCCAAAAAAATCAAAAAACCAAAAAAA L F H R E L P P - K K S K K I K K P K K C F I G N S P H K K N P K K S K N Q K N V V S - G T P P I K K I Q K N Q K T K K . . . . . . 108177 TGACAAAGAAGGTGGTAATTGGTGGAATAGCTTCTGTTCTTGTGGTGGCTTGTGTGGTGG - Q R R W - L V E - L L F L W W L V W W D K E G G N W W N S F C S C G G L C G G M T K K V V I G G I A S V L V V A C V V . . . . . . 108237 CAGCCTGTGTCACCCTGACTAAACATGATTCTGATACTTCATCAAATGGAGTTGCAACTT Q P V S P - L N M I L I L H Q M E L Q L S L C H P D - T - F - Y F I K W S C N F A A C V T L T K H D S D T S S N G V A T . . . . . . 108297 CAACAAAGTCAGTTGAATCTATGTGTCAACCCACACCATACAAACAAACTTGTGAAAAGA Q Q S Q L N L C V N P H H T N K L V K R N K V S - I Y V S T H T I Q T N L - K D S T K S V E S M C Q P T P Y K Q T C E K . . . . . . 108357 CCCTCTCCGCAGCAAAGAATGTGTCCGATCCAAAGGACTACATCAAGGTTGCATTCGAAG P S P Q Q R M C P I Q R T T S R L H S K P L R S K E C V R S K G L H Q G C I R S T L S A A K N V S D P K D Y I K V A F E . . . . . . 108417 CCACTGTGGCAGACATCAAGAATGCCATCAAGAACACTGAGCCAGTTAAGAAAGCTGCTA P L W Q T S R M P S R T L S Q L R K L L H C G R H Q E C H Q E H - A S - E S C - A T V A D I K N A I K N T E P V K K A A . . . . . . 108477 GTGATCCTTACACCAAAGACGCTCTCCTTGCTTGTGAAGAGGTGTTTGATCTAGCCGTTG V I L T P K T L S L L V K R C L I - P L - S L H Q R R S P C L - R G V - S S R - S D P Y T K D A L L A C E E V F D L A V . . . . . . 108537 AGGAACTAAGGGGCTCTATCGCTAGGATTGAGAACTTTGATTTCTCTAAGATGAAGGATA R N - G A L S L G L R T L I S L R - R I G T K G L Y R - D - E L - F L - D E G Y E E L R G S I A R I E N F D F S K M K D . . . . . . 108597 TAGTGGATGACCTCAAGTCATGGCTTAGCGCTGTCGTTGCTTATGAAGAGACTTGTTTAG - W M T S S H G L A L S L L M K R L V - S G - P Q V M A - R C R C L - R D L F R I V D D L K S W L S A V V A Y E E T C L . . . . . . 108657 ATGGTTTCACCAAATCAGAATACAGTGCAACCCGTGACGAAATGATGAAGCTAATGAGCA M V S P N Q N T V Q P V T K - - S - - A W F H Q I R I Q C N P - R N D E A N E H D G F T K S E Y S A T R D E M M K L M S . . . . . . 108717 CCACTCGGGAGCTGAGTAGCAATGCTCTTTCCATGGTCAACAGCTTCGGTGAAATGATCA P L G S - V A M L F P W S T A S V K - S H S G A E - Q C S F H G Q Q L R - N D H T T R E L S S N A L S M V N S F G E M I . . . . . . 108777 CACAAAACACAGGCCTTACCCGCAAATTGTTATCAAACAGTGACTCATTTGTCGAAGCCA H K T Q A L P A N C Y Q T V T H L S K P T K H R P Y P Q I V I K Q - L I C R S Q T Q N T G L T R K L L S N S D S F V E A . . . . . . 108837 GTAATCGTAAGCTCCTTCAAATTTCTGCCTCCAAGCCTAATGCTGTGGTTTCTGCCAGTG V I V S S F K F L P P S L M L W F L P V - S - A P S N F C L Q A - C C G F C Q W S N R K L L Q I S A S K P N A V V S A S . . . . . . 108897 GAGGCGGACAATACAAGACCATTCAGGAAGCACTTCAAGCTGTCCCCAAGAGTAGTCCAA E A D N T R P F R K H F K L S P R V V Q R R T I Q D H S G S T S S C P Q E - S N G G G Q Y K T I Q E A L Q A V P K S S P . . . . . . 108957 CTCCTTTCGTTATCCTGATCAAGGCGGGTACATACAAGGAACACATTCAAATCGAAAAGA L L S L S - S R R V H T R N T F K S K R S F R Y P D Q G G Y I Q G T H S N R K E T P F V I L I K A G T Y K E H I Q I E K . . . . . . 109017 ACATGCTAAATGTTGTGCTTATTGGTGAAGGCCCAACCAAGACCATAATCACCGGTGACC T C - M L C L L V K A Q P R P - S P V T H A K C C A Y W - R P N Q D H N H R - P N M L N V V L I G E G P T K T I I T G D . . . . . . 109077 AGGCAGTAGTTCCTAACCGTATATCAACATGGCATACAGCCACCCTTGGTGTTTGTGGTG R Q - F L T V Y Q H G I Q P P L V F V V G S S S - P Y I N M A Y S H P W C L W - Q A V V P N R I S T W H T A T L G V C G . . . . . . 109137 ATGGTTTCGTTATGAAGGACATGGGTATTGAAAACACAGCAGGACCCACAAAAGAACAAG M V S L - R T W V L K T Q Q D P Q K N K W F R Y E G H G Y - K H S R T H K R T S D G F V M K D M G I E N T A G P T K E Q . . . . . . 109197 CCGTTGCATTGAGAATTAATGCTGATAAGGCTGTTCTCTACAACTGCAATATCGATGGTT P L H - E L M L I R L F S T T A I S M V R C I E N - C - - G C S L Q L Q Y R W L A V A L R I N A D K A V L Y N C N I D G . . . . . . 109257 ACCAAGACACGTTATATGCTCACTCAGGAAGACAATTTTATCGTGATTGTACCATTACAG T K T R Y M L T Q E D N F I V I V P L Q P R H V I C S L R K T I L S - L Y H Y R Y Q D T L Y A H S G R Q F Y R D C T I T . . . . . . 109317 GCACCATTGATTTCTTGTTTGGTGATGCAAGTGCTGTTTTCCAAAACTGCAAATTGATTG A P L I S C L V M Q V L F S K T A N - L H H - F L V W - C K C C F P K L Q I D C G T I D F L F G D A S A V F Q N C K L I . . . . . . 109377 TGAGGAAACCAGGTCCTAATCAAGCTTGCATGATCACTGCTCAAGGAAGGATGAGAAAAG - G N Q V L I K L A - S L L K E G - E K E E T R S - S S L H D H C S R K D E K R V R K P G P N Q A C M I T A Q G R M R K . . . . . . 109437 ATTCCTTAGGTGGATTCGTTATCCAAAATTGTGACATCAAGGCTGATAAAGCACTCACTA I P - V D S L S K I V T S R L I K H S L F L R W I R Y P K L - H Q G - - S T H - D S L G G F V I Q N C D I K A D K A L T . . . . . . 109497 GCGCCAATCCACCAGTCAAAGTCTATCTTGGACGTCCATGGAAGGAGTTTTCCAAGACCA A P I H Q S K S I L D V H G R S F P R P R Q S T S Q S L S W T S M E G V F Q D H S A N P P V K V Y L G R P W K E F S K T . . . . . . 109557 TCATAATGCAATCAAACATCGATGGATTCGTCGATCCATCAGGATGGTCACCATGGAACA S - C N Q T S M D S S I H Q D G H H G T H N A I K H R W I R R S I R M V T M E H I I M Q S N I D G F V D P S G W S P W N . . . . . . 109617 CAACTGATTTTGGAATACACACATGTTTTTATGCAGAGTATCAGAACAGAGGACCAGGTG Q L I L E Y T H V F M Q S I R T E D Q V N - F W N T H M F L C R V S E Q R T R C T T D F G I H T C F Y A E Y Q N R G P G . . . . . . 109677 CTGCACTTGACAAAAGAGTCTCCACATGGAGAGGTTACCAAAAGGATATTTCAGGAGACG L H L T K E S P H G E V T K R I F Q E T C T - Q K S L H M E R L P K G Y F R R R A A L D K R V S T W R G Y Q K D I S G D . . . . . . 109737 TTATTAACAGCTTCACTGCCGGTAAATTCATTAATACACAACAGCCATGGTTACCAATGT L L T A S L P V N S L I H N S H G Y Q C Y - Q L H C R - I H - Y T T A M V T N V V I N S F T A G K F I N T Q Q P W L P M . . . . . . 109797 TTGATATTCCCTATGAAGCTGGCATGATGAAGGTGTAATTACATATACCATTCATCCTGT L I F P M K L A - - R C N Y I Y H S S C - Y S L - S W H D E G V I T Y T I H P V F D I P Y E A G M M K V - L H I P F I L . . . . 109857 AATTTTTTCTAATTATTCAAAATTATATTTCCT N F F - L F K I I F P I F S N Y S K L Y F - F F L I I Q N Y I S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-15_AGS-1_PPS_1 (108128 109834) (frame '0'; 1704 bp, 568 residues) 1 GTPPIKKIQK NQKTKKMTKK VVIGGIASVL VVACVVAACV TLTKHDSDTS SNGVATSTKS 61 VESMCQPTPY KQTCEKTLSA AKNVSDPKDY IKVAFEATVA DIKNAIKNTE PVKKAASDPY 121 TKDALLACEE VFDLAVEELR GSIARIENFD FSKMKDIVDD LKSWLSAVVA YEETCLDGFT 181 KSEYSATRDE MMKLMSTTRE LSSNALSMVN SFGEMITQNT GLTRKLLSNS DSFVEASNRK 241 LLQISASKPN AVVSASGGGQ YKTIQEALQA VPKSSPTPFV ILIKAGTYKE HIQIEKNMLN 301 VVLIGEGPTK TIITGDQAVV PNRISTWHTA TLGVCGDGFV MKDMGIENTA GPTKEQAVAL 361 RINADKAVLY NCNIDGYQDT LYAHSGRQFY RDCTITGTID FLFGDASAVF QNCKLIVRKP 421 GPNQACMITA QGRMRKDSLG GFVIQNCDIK ADKALTSANP PVKVYLGRPW KEFSKTIIMQ 481 SNIDGFVDPS GWSPWNTTDF GIHTCFYAEY QNRGPGAALD KRVSTWRGYQ KDISGDVINS 541 FTAGKFINTQ QPWLPMFDIP YEAGMMKV- 3-phase translation of AGS-1 (-strand): . . . . . . 109889 AGGAAATATAATTTTGAATAATTAGAAAAAATTACAGGATGAATGGTATATGTAATTACA R K Y N F E - L E K I T G - M V Y V I T G N I I L N N - K K L Q D E W Y M - L H E I - F - I I R K N Y R M N G I C N Y . . . . . . 109829 CCTTCATCATGCCAGCTTCATAGGGAATATCAAACATTGGTAACCATGGCTGTTGTGTAT P S S C Q L H R E Y Q T L V T M A V V Y L H H A S F I G N I K H W - P W L L C I T F I M P A S - G I S N I G N H G C C V . . . . . . 109769 TAATGAATTTACCGGCAGTGAAGCTGTTAATAACGTCTCCTGAAATATCCTTTTGGTAAC - - I Y R Q - S C - - R L L K Y P F G N N E F T G S E A V N N V S - N I L L V T L M N L P A V K L L I T S P E I S F W - . . . . . . 109709 CTCTCCATGTGGAGACTCTTTTGTCAAGTGCAGCACCTGGTCCTCTGTTCTGATACTCTG L S M W R L F C Q V Q H L V L C S D T L S P C G D S F V K C S T W S S V L I L C P L H V E T L L S S A A P G P L F - Y S . . . . . . 109649 CATAAAAACATGTGTGTATTCCAAAATCAGTTGTGTTCCATGGTGACCATCCTGATGGAT H K N M C V F Q N Q L C S M V T I L M D I K T C V Y S K I S C V P W - P S - W I A - K H V C I P K S V V F H G D H P D G . . . . . . 109589 CGACGAATCCATCGATGTTTGATTGCATTATGATGGTCTTGGAAAACTCCTTCCATGGAC R R I H R C L I A L - W S W K T P S M D D E S I D V - L H Y D G L G K L L P W T S T N P S M F D C I M M V L E N S F H G . . . . . . 109529 GTCCAAGATAGACTTTGACTGGTGGATTGGCGCTAGTGAGTGCTTTATCAGCCTTGATGT V Q D R L - L V D W R - - V L Y Q P - C S K I D F D W W I G A S E C F I S L D V R P R - T L T G G L A L V S A L S A L M . . . . . . 109469 CACAATTTTGGATAACGAATCCACCTAAGGAATCTTTTCTCATCCTTCCTTGAGCAGTGA H N F G - R I H L R N L F S S F L E Q - T I L D N E S T - G I F S H P S L S S D S Q F W I T N P P K E S F L I L P - A V . . . . . . 109409 TCATGCAAGCTTGATTAGGACCTGGTTTCCTCACAATCAATTTGCAGTTTTGGAAAACAG S C K L D - D L V S S Q S I C S F G K Q H A S L I R T W F P H N Q F A V L E N S I M Q A - L G P G F L T I N L Q F W K T . . . . . . 109349 CACTTGCATCACCAAACAAGAAATCAATGGTGCCTGTAATGGTACAATCACGATAAAATT H L H H Q T R N Q W C L - W Y N H D K I T C I T K Q E I N G A C N G T I T I K L A L A S P N K K S M V P V M V Q S R - N . . . . . . 109289 GTCTTCCTGAGTGAGCATATAACGTGTCTTGGTAACCATCGATATTGCAGTTGTAGAGAA V F L S E H I T C L G N H R Y C S C R E S S - V S I - R V L V T I D I A V V E N C L P E - A Y N V S W - P S I L Q L - R . . . . . . 109229 CAGCCTTATCAGCATTAATTCTCAATGCAACGGCTTGTTCTTTTGTGGGTCCTGCTGTGT Q P Y Q H - F S M Q R L V L L W V L L C S L I S I N S Q C N G L F F C G S C C V T A L S A L I L N A T A C S F V G P A V . . . . . . 109169 TTTCAATACCCATGTCCTTCATAACGAAACCATCACCACAAACACCAAGGGTGGCTGTAT F Q Y P C P S - R N H H H K H Q G W L Y F N T H V L H N E T I T T N T K G G C M F S I P M S F I T K P S P Q T P R V A V . . . . . . 109109 GCCATGTTGATATACGGTTAGGAACTACTGCCTGGTCACCGGTGATTATGGTCTTGGTTG A M L I Y G - E L L P G H R - L W S W L P C - Y T V R N Y C L V T G D Y G L G W C H V D I R L G T T A W S P V I M V L V . . . . . . 109049 GGCCTTCACCAATAAGCACAACATTTAGCATGTTCTTTTCGATTTGAATGTGTTCCTTGT G L H Q - A Q H L A C S F R F E C V P C A F T N K H N I - H V L F D L N V F L V G P S P I S T T F S M F F S I - M C S L . . . . . . 108989 ATGTACCCGCCTTGATCAGGATAACGAAAGGAGTTGGACTACTCTTGGGGACAGCTTGAA M Y P P - S G - R K E L D Y S W G Q L E C T R L D Q D N E R S W T T L G D S L K Y V P A L I R I T K G V G L L L G T A - . . . . . . 108929 GTGCTTCCTGAATGGTCTTGTATTGTCCGCCTCCACTGGCAGAAACCACAGCATTAGGCT V L P E W S C I V R L H W Q K P Q H - A C F L N G L V L S A S T G R N H S I R L S A S - M V L Y C P P P L A E T T A L G . . . . . . 108869 TGGAGGCAGAAATTTGAAGGAGCTTACGATTACTGGCTTCGACAAATGAGTCACTGTTTG W R Q K F E G A Y D Y W L R Q M S H C L G G R N L K E L T I T G F D K - V T V - L E A E I - R S L R L L A S T N E S L F . . . . . . 108809 ATAACAATTTGCGGGTAAGGCCTGTGTTTTGTGTGATCATTTCACCGAAGCTGTTGACCA I T I C G - G L C F V - S F H R S C - P - Q F A G K A C V L C D H F T E A V D H D N N L R V R P V F C V I I S P K L L T . . . . . . 108749 TGGAAAGAGCATTGCTACTCAGCTCCCGAGTGGTGCTCATTAGCTTCATCATTTCGTCAC W K E H C Y S A P E W C S L A S S F R H G K S I A T Q L P S G A H - L H H F V T M E R A L L L S S R V V L I S F I I S S . . . . . . 108689 GGGTTGCACTGTATTCTGATTTGGTGAAACCATCTAAACAAGTCTCTTCATAAGCAACGA G L H C I L I W - N H L N K S L H K Q R G C T V F - F G E T I - T S L F I S N D R V A L Y S D L V K P S K Q V S S - A T . . . . . . 108629 CAGCGCTAAGCCATGACTTGAGGTCATCCACTATATCCTTCATCTTAGAGAAATCAAAGT Q R - A M T - G H P L Y P S S - R N Q S S A K P - L E V I H Y I L H L R E I K V T A L S H D L R S S T I S F I L E K S K . . . . . . 108569 TCTCAATCCTAGCGATAGAGCCCCTTAGTTCCTCAACGGCTAGATCAAACACCTCTTCAC S Q S - R - S P L V P Q R L D Q T P L H L N P S D R A P - F L N G - I K H L F T F S I L A I E P L S S S T A R S N T S S . . . . . . 108509 AAGCAAGGAGAGCGTCTTTGGTGTAAGGATCACTAGCAGCTTTCTTAACTGGCTCAGTGT K Q G E R L W C K D H - Q L S - L A Q C S K E S V F G V R I T S S F L N W L S V Q A R R A S L V - G S L A A F L T G S V . . . . . . 108449 TCTTGATGGCATTCTTGATGTCTGCCACAGTGGCTTCGAATGCAACCTTGATGTAGTCCT S - W H S - C L P Q W L R M Q P - C S P L D G I L D V C H S G F E C N L D V V L F L M A F L M S A T V A S N A T L M - S . . . . . . 108389 TTGGATCGGACACATTCTTTGCTGCGGAGAGGGTCTTTTCACAAGTTTGTTTGTATGGTG L D R T H S L L R R G S F H K F V C M V W I G H I L C C G E G L F T S L F V W C F G S D T F F A A E R V F S Q V C L Y G . . . . . . 108329 TGGGTTGACACATAGATTCAACTGACTTTGTTGAAGTTGCAACTCCATTTGATGAAGTAT W V D T - I Q L T L L K L Q L H L M K Y G L T H R F N - L C - S C N S I - - S I V G - H I D S T D F V E V A T P F D E V . . . . . . 108269 CAGAATCATGTTTAGTCAGGGTGACACAGGCTGCCACCACACAAGCCACCACAAGAACAG Q N H V - S G - H R L P P H K P P Q E Q R I M F S Q G D T G C H H T S H H K N R S E S C L V R V T Q A A T T Q A T T R T . . . . . . 108209 AAGCTATTCCACCAATTACCACCTTCTTTGTCATTTTTTTGGTTTTTTGATTTTTTTGGA K L F H Q L P P S L S F F W F F D F F G S Y S T N Y H L L C H F F G F L I F L D E A I P P I T T F F V I F L V F - F F W . . . . . . 108149 TTTTTTTTATGGGGGGAGTTCCCTATGAAACAACCCCTATGGTTCTTCTTGTAAGTGAAG F F L W G E F P M K Q P L W F F L - V K F F Y G G S S L - N N P Y G S S C K - R I F F M G G V P Y E T T P M V L L V S E . . . . 108089 AACTCAGAGGGGTTTTATTGAAGGCTGTGTTTA N S E G F Y - R L C L T Q R G F I E G C V E L R G V L L K A V F Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-15_AGS-1_PPS_1 (109233 109003) (frame '0'; 228 bp, 76 residues) 1 RTALSALILN ATACSFVGPA VFSIPMSFIT KPSPQTPRVA VCHVDIRLGT TAWSPVIMVL 61 VGPSPISTTF SMFFSI- >C01HBa0163B20.1-_PGL-15_AGS-1_PPS_2 (108526 108305) (frame '2'; 219 bp, 73 residues) 1 IKHLFTSKES VFGVRITSSF LNWLSVLDGI LDVCHSGFEC NLDVVLWIGH ILCCGEGLFT 61 SLFVWCGLTH RFN- >C01HBa0163B20.1-_PGL-15_AGS-1_PPS_3 (108852 108637) (frame '0'; 213 bp, 71 residues) 1 RSLRLLASTN ESLFDNNLRV RPVFCVIISP KLLTMERALL LSSRVVLISF IISSRVALYS 61 DLVKPSKQVS S- >C01HBa0163B20.1-_PGL-15_AGS-1_PPS_4 (109021 108821) (frame '2'; 198 bp, 66 residues) 1 HVLFDLNVFL VCTRLDQDNE RSWTTLGDSL KCFLNGLVLS ASTGRNHSIR LGGRNLKELT 61 ITGFDK- PGL 16 (+ strand): 110856 116730 AGS-1 (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514,116426 116465,116710 116730) SCR (e 0.736 d 0.000 a 0.000,e 0.786 d 0.736 a 0.000,e 0.600 d 0.990 a 0.781,e 0.556 d 0.900 a 0.000,e 0.824 d 0.000 a 0.000,e 0.917 d 0.000 a 0.869,e 0.619) Exon 1 110856 110908 ( 53 n); score: 0.736 Intron 1 110909 111176 ( 268 n); Pd: 0.000 Pa: 0.000 Exon 2 111177 111190 ( 14 n); score: 0.786 Intron 2 111191 111564 ( 374 n); Pd: 0.736 Pa: 0.000 Exon 3 111565 111589 ( 25 n); score: 0.600 Intron 3 111590 111686 ( 97 n); Pd: 0.990 Pa: 0.781 Exon 4 111687 111695 ( 9 n); score: 0.556 Intron 4 111696 112059 ( 364 n); Pd: 0.900 Pa: 0.000 Exon 5 112060 112514 ( 455 n); score: 0.824 Intron 5 112515 116425 (3911 n); Pd: 0.000 Pa: 0.000 Exon 6 116426 116465 ( 40 n); score: 0.917 Intron 6 116466 116709 ( 244 n); Pd: 0.000 Pa: 0.869 Exon 7 116710 116730 ( 21 n); score: 0.619 PGS (110856 110908,111177 111190,111565 111589,111687 111695,112060 112514) SGN-E542167+ PGS (110856 110908,111177 111190,111565 111589,111687 111695,112060 112448) SGN-E548670+ PGS (112072 112267) SGN-E300105+ PGS (112233 112514,116426 116461) SGN-E542170- PGS (112316 112518) SGN-E309926+ PGS (112317 112514,116426 116465,116710 116730) SGN-E390507+ PGS (112321 112514,116426 116465,116710 116730) SGN-E326330+ PGS (112321 112514,116426 116465,116710 116730) SGN-E324513+ PGS (112321 112518) SGN-E378308+ 3-phase translation of AGS-1 (+strand): . . . . . . : 110856 ATCAGCAAAAAAAAAAAGTATATTTATACTTTTTATTATTAATAATGAATTCT : CCAAGCA I S K K K K Y I Y T F Y Y - - - I L : Q A S A K K K S I F I L F I I N N E F : S K H Q Q K K K V Y L Y F L L L I M N S : P S . : . . . : . : . 111184 TGAAAAT : TTTCCGAAACTTTTGGATGAGTTTC : CACTTCGAA : ATTTGTATTAATGTGTTAA - K : F S E T F G - V S : T S K : F V L M C - E N : F P K L L D E F : P L R : N L Y - C V K M K I : F R N F W M S F : H F E : I C I N V L . . . . . . 112079 ACTTGACAAGATTCAAAAATGGATTAATGATAAGATATGGTAGTTAGAAGGATAATTCTT T - Q D S K M D - - - D M V V R R I I L L D K I Q K W I N D K I W - L E G - F F N L T R F K N G L M I R Y G S - K D N S . . . . . . 112139 CATTGGTAGAAAAGTCAAGAAAGCACCTTTGTAGGTGAAATTTAGGTGAAACATAAATTG H W - K S Q E S T F V G E I - V K H K L I G R K V K K A P L - V K F R - N I N W S L V E K S R K H L C R - N L G E T - I . . . . . . 112199 GTTTCACGAGGTAAATCTTGACATATTTTGATGTCATGGATGACATTAATAGGAAGAATT V S R G K S - H I L M S W M T L I G R I F H E V N L D I F - C H G - H - - E E F G F T R - I L T Y F D V M D D I N R K N . . . . . . 112259 CACTCCTATGTAGGTAGCTCCTAATTCATTTGTAACACATCTTTACTTGCCTTCTCATCT H S Y V G S S - F I C N T S L L A F S S T P M - V A P N S F V T H L Y L P S H L S L L C R - L L I H L - H I F T C L L I . . . . . . 112319 CCTAATACATTTGTTCTTCTTCCCATCTTGTAGTATTTTACTTGTAATTTTTTGGAGTGA P N T F V L L P I L - Y F T C N F L E - L I H L F F F P S C S I L L V I F W S E S - Y I C S S S H L V V F Y L - F F G V . . . . . . 112379 AATAAATATTGGTTGGTTGTGTCCGAGGAGTAGGCAAAAGAAAATAAAATTTTACCGAAC N K Y W L V V S E E - A K E N K I L P N I N I G W L C P R S R Q K K I K F Y R T K - I L V G C V R G V G K R K - N F T E . . . . . . 112439 CTCGTTAATTCTTGGTATTCCTTTTATTGTTGTCTTATTTACTATTTATTAGCTACCTTT L V N S W Y S F Y C C L I Y Y L L A T F S L I L G I P F I V V L F T I Y - L P L P R - F L V F L L L L S Y L L F I S Y L . . : . . . . : 112499 AGTTATAGTAGTTGTG : ATTCCATTACTCTCTATATATTCCGCTTCCGCAACAATTG : GACA S Y S S C : D S I T L Y I F R F R N N W : T V I V V V : I P L L S I Y S A S A T I : G H - L - - L - : F H Y S L Y I P L P Q Q L : D . . 116714 TTTCAGACTGTGGTGAG F Q T V V F R L W - I S D C G E Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-16_AGS-1_PPS_1 (112272 112490) (frame '2'; 216 bp, 72 residues) 1 VAPNSFVTHL YLPSHLLIHL FFFPSCSILL VIFWSEINIG WLCPRSRQKK IKFYRTSLIL 61 GIPFIVVLFT IY- AGS-2 (113225 113355,113494 114020) SCR (e 0.760 d 0.000 a 0.000,e 0.809) Exon 1 113225 113355 ( 131 n); score: 0.760 Intron 1 113356 113493 ( 138 n); Pd: 0.000 Pa: 0.000 Exon 2 113494 114020 ( 527 n); score: 0.809 PGS (113225 113355,113494 114020) SGN-E353367- 3-phase translation of AGS-2 (+strand): . . . . . . 113225 CTAAAAGCTATCCTAAAACTCATTTAAGTAAGACAAAGAGAGATCGCTCATACAACCTCT L K A I L K L I - V R Q R E I A H T T S - K L S - N S F K - D K E R S L I Q P L K S Y P K T H L S K T K R D R S Y N L . . . . . . 113285 CTAGGCACACCTAAATGATCTTTAAGACCACCTATAATGAGATCAACACACACTTACAAG L G T P K - S L R P P I M R S T H T Y K - A H L N D L - D H L - - D Q H T L T R S R H T - M I F K T T Y N E I N T H L Q . . : . . . . 113345 ACACCAAACAT : AACAACATATAGATGATATGACATTCTCCTTCCAAAGGCTATCAAAATA T P N I : T T Y R - Y D I L L P K A I K I H Q T : - Q H I D D M T F S F Q R L S K Y D T K H : N N I - M I - H S P S K G Y Q N . . . . . . 113543 CTTACTTAAGTAAATCAAGAAGATAACGTTCATATTGACCTATTCAAGATTACCAAAATA L T - V N Q E D N V H I D L F K I T K I L L K - I K K I T F I L T Y S R L P K - T Y L S K S R R - R S Y - P I Q D Y Q N . . . . . . 113603 ATCTTTAAGACTACCTAAGGCTTAGATCATGTCTACATAATCAACCATCTTCCCTAAGTA I F K T T - G L D H V Y I I N H L P - V S L R L P K A - I M S T - S T I F P K - N L - D Y L R L R S C L H N Q P S S L S . . . . . . 113663 GAGTCATTCTTAGGACTTATCTAGGTAAGATACGAAGTGACCATTCTTATGCCCCCTTCA E S F L G L I - V R Y E V T I L M P P S S H S - D L S R - D T K - P F L C P L H R V I L R T Y L G K I R S D H S Y A P F . . . . . . 113723 CACCTTAACTAGACAACTATTAACTACTATAGATAAGTACTTATTCATTTAACATACTTT H L N - T T I N Y Y R - V L I H L T Y F T L T R Q L L T T I D K Y L F I - H T F T P - L D N Y - L L - I S T Y S F N I L . . . . . . 113783 CTTAACTTAATTCATTACATTCATTTAAGACTCATTCATCACATAAGGACATTCAAGTAA L N L I H Y I H L R L I H H I R T F K - L T - F I T F I - D S F I T - G H S S N S - L N S L H S F K T H S S H K D I Q V . . . . . . 113843 TGGTCTTGGACAACACCTAGGGACTCTAACTAACATCTTCAAAACTAACATCTTCAAAGT W S W T T P R D S N - H L Q N - H L Q S G L G Q H L G T L T N I F K T N I F K V M V L D N T - G L - L T S S K L T S S K . . . . . . 113903 CTATTGTGCAATGTCTAGATAGTATCTCATACCATCACCTAAACTTCATTGAACTTCTCT L L C N V - I V S H T I T - T S L N F S Y C A M S R - Y L I P S P K L H - T S L S I V Q C L D S I S Y H H L N F I E L L . . . . . . 113963 AATGCTAGTAGGTATCCCATATGATAAGAATAAACAATAAACAACATAGAAAATGATA N A S R Y P I - - E - T I N N I E N D M L V G I P Y D K N K Q - T T - K M I - C - - V S H M I R I N N K Q H R K - Maximal non-overlapping open reading frames (>= 64 codons): none PGL 17 (- strand): 120580 120206 AGS-1 (120580 120206) SCR (e 0.785) Exon 1 120580 120206 ( 375 n); score: 0.785 PGS (120580 120206) SGN-E540411- 3-phase translation of AGS-1 (-strand): . . . . . . 120580 TATTATTTATTATTATGTTATAATTTATAAGTTATATTTAAGGAAAATGCACAAGTACCT Y Y L L L C Y N L - V I F K E N A Q V P I I Y Y Y V I I Y K L Y L R K M H K Y L L F I I M L - F I S Y I - G K C T S T . . . . . . 120520 GCTCAACCTATGTTTGAAATCTCAAAGACACACTTATATTATATTAAGGTCCTATTACCC A Q P M F E I S K T H L Y Y I K V L L P L N L C L K S Q R H T Y I I L R S Y Y P C S T Y V - N L K D T L I L Y - G P I T . . . . . . 120460 CCTAAACTTATTGTATAACTATTTTTCTACCACTTTTCGGCCTACATGACACTATCTTGT P K L I V - L F F Y H F S A Y M T L S C L N L L Y N Y F S T T F R P T - H Y L V P - T Y C I T I F L P L F G L H D T I L . . . . . . 120400 AGGCCCAACGTATGTTGACATTTTTCTTCAAGCTAGTGTCACGTAGGACGAAAGGGATAG R P N V C - H F S S S - C H V G R K G - G P T Y V D I F L Q A S V T - D E R D R - A Q R M L T F F F K L V S R R T K G I . . . . . . 120340 AAAATTATTTATAGAATAAGTTCAGGGGGGTAATAGGACCTGAGTATAGTATAAGTGTGT K I I Y R I S S G G - - D L S I V - V C K L F I E - V Q G G N R T - V - Y K C V E N Y L - N K F R G V I G P E Y S I S V . . . . . . 120280 CTCTGAGATTCCGGGCATAGGTTGAGGGGGTACTTTTGCATTTTCCCTTATATTTATTAC L - D S G H R L R G Y F C I F P Y I Y Y S E I P G I G - G G T F A F S L I F I T S L R F R A - V E G V L L H F P L Y L L . . 120220 TTGTAGTTTAAATGA L - F K - C S L N L V V - M Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 120206 TCATTTAAACTACAAGTAATAAATATAAGGGAAAATGCAAAAGTACCCCCTCAACCTATG S F K L Q V I N I R E N A K V P P Q P M H L N Y K - - I - G K M Q K Y P L N L C I - T T S N K Y K G K C K S T P S T Y . . . . . . 120266 CCCGGAATCTCAGAGACACACTTATACTATACTCAGGTCCTATTACCCCCCTGAACTTAT P G I S E T H L Y Y T Q V L L P P - T Y P E S Q R H T Y T I L R S Y Y P P E L I A R N L R D T L I L Y S G P I T P L N L . . . . . . 120326 TCTATAAATAATTTTCTATCCCTTTCGTCCTACGTGACACTAGCTTGAAGAAAAATGTCA S I N N F L S L S S Y V T L A - R K M S L - I I F Y P F R P T - H - L E E K C Q F Y K - F S I P F V L R D T S L K K N V . . . . . . 120386 ACATACGTTGGGCCTACAAGATAGTGTCATGTAGGCCGAAAAGTGGTAGAAAAATAGTTA T Y V G P T R - C H V G R K V V E K - L H T L G L Q D S V M - A E K W - K N S Y N I R W A Y K I V S C R P K S G R K I V . . . . . . 120446 TACAATAAGTTTAGGGGGTAATAGGACCTTAATATAATATAAGTGTGTCTTTGAGATTTC Y N K F R G - - D L N I I - V C L - D F T I S L G G N R T L I - Y K C V F E I S I Q - V - G V I G P - Y N I S V S L R F . . . . . . 120506 AAACATAGGTTGAGCAGGTACTTGTGCATTTTCCTTAAATATAACTTATAAATTATAACA K H R L S R Y L C I F L K Y N L - I I T N I G - A G T C A F S L N I T Y K L - H Q T - V E Q V L V H F P - I - L I N Y N . . 120566 TAATAATAAATAATA - - - I I N N K - I I I N N Maximal non-overlapping open reading frames (>= 64 codons): none PGL 18 (- strand): 123192 121192 AGS-1 (123192 122117,122028 121192) SCR (e 1.000 d 0.969 a 0.981,e 0.988) Exon 1 123192 122117 (1076 n); score: 1.000 Intron 1 122116 122029 ( 88 n); Pd: 0.969 Pa: 0.981 Exon 2 122028 121192 ( 837 n); score: 0.988 PGS (121611 121192) SGN-E239221- PGS (121556 121192) SGN-E238742- PGS (121550 121192) SGN-E239140- PGS (121603 121281) SGN-E234823- PGS (121663 121289) SGN-E394600- PGS (122017 121293) SGN-E546817- PGS (122001 121293) SGN-E546778- PGS (121963 121294) SGN-E374400- PGS (121977 121298) SGN-E549427+ PGS (122153 122117,122028 121304) SGN-E546818+ PGS (122354 122117,122028 121506) SGN-E333346+ PGS (122242 122117,122028 121548) SGN-E333283+ PGS (122563 122117,122028 121866) SGN-E374401+ PGS (122662 122117,122028 121967) SGN-E332262+ PGS (122877 122261) SGN-E331396+ PGS (123185 122413) SGN-E333949+ PGS (123192 122452) SGN-E333007+ PGS (123185 122453) SGN-E332743+ PGS (123176 122453) SGN-E332444+ PGS (123185 122496) SGN-E332870+ 3-phase translation of AGS-1 (-strand): . . . . . . 123192 GCATGTACGGTCTCTAATAAAAAATCCCCAAAAGCTCTCTATCGATTTAACTATACAAAA A C T V S N K K S P K A L Y R F N Y T K H V R S L I K N P Q K L S I D L T I Q K M Y G L - - K I P K S S L S I - L Y K . . . . . . 123132 ACATTTTTTTTTTTACTTTGGGAAAAATACATAAAAGCATCAAAATATTATGGCTAAAAA T F F F L L W E K Y I K A S K Y Y G - K H F F F Y F G K N T - K H Q N I M A K K N I F F F T L G K I H K S I K I L W L K . . . . . . 123072 ATTAGTCATTGGTGGCATAGCCTCAATTCTTGTGGTGGCTTGTGTTGTTGCAGCATGTGT I S H W W H S L N S C G G L C C C S M C L V I G G I A S I L V V A C V V A A C V N - S L V A - P Q F L W W L V L L Q H V . . . . . . 123012 CACCATTACCAAAAAGAATGCGAGCGATGGTGGTGATGGAGCTAGCAATGGTGGCATTTC H H Y Q K E C E R W W - W S - Q W W H F T I T K K N A S D G G D G A S N G G I S S P L P K R M R A M V V M E L A M V A F . . . . . . 122952 AACCTCTACAAAATCTGTTCAAGCAATGTGTCAACCTACTGACTACAAAGAAGCTTGTGA N L Y K I C S S N V S T Y - L Q R S L - T S T K S V Q A M C Q P T D Y K E A C E Q P L Q N L F K Q C V N L L T T K K L V . . . . . . 122892 GAAGAGTCTTGCATCAGCCAAGAACACTAGTGACCCAAAGGAACTTATAAAAGTTGCATT E E S C I S Q E H - - P K G T Y K S C I K S L A S A K N T S D P K E L I K V A F R R V L H Q P R T L V T Q R N L - K L H . . . . . . 122832 TGAATCAACCATAACTGACATAAAAAATGCCATAAAAAATACTGACTTGATCAAGGATGC - I N H N - H K K C H K K Y - L D Q G C E S T I T D I K N A I K N T D L I K D A L N Q P - L T - K M P - K I L T - S R M . . . . . . 122772 AGCCAATGATCCTAGAACAAAAGAGGCTCTAAATACTTGTGACGGTCTTCTTGATGTGTC S Q - S - N K R G S K Y L - R S S - C V A N D P R T K E A L N T C D G L L D V S Q P M I L E Q K R L - I L V T V F L M C . . . . . . 122712 TATTGATGATCTCAGAAGATCGTTCGATAAAGTTGGCACCTTTGATATTAACAAGATCAA Y - - S Q K I V R - S W H L - Y - Q D Q I D D L R R S F D K V G T F D I N K I K L L M I S E D R S I K L A P L I L T R S . . . . . . 122652 GGATTATACCGATGATCTAAAAACATGGATCAGTGCTTCGATTACTTATCAAGAAACTTG G L Y R - S K N M D Q C F D Y L S R N L D Y T D D L K T W I S A S I T Y Q E T C R I I P M I - K H G S V L R L L I K K L . . . . . . 122592 CTTAGATGCTTTTCAAAACACAAGTGGTGACACTGGTGAAAAAATGAAGAAATTGTTAAA L R C F S K H K W - H W - K N E E I V K L D A F Q N T S G D T G E K M K K L L K A - M L F K T Q V V T L V K K - R N C - . . . . . . 122532 GACTGCAGGGGAGCTTACTAGCAATGGCCTTGCTATGATTACTAGCTTTGGTGACATGCT D C R G A Y - Q W P C Y D Y - L W - H A T A G E L T S N G L A M I T S F G D M L R L Q G S L L A M A L L - L L A L V T C . . . . . . 122472 TACTAACATGAACATTCCTGGTATTAGCCGCCGATTATTGGCAGATGACTACACATCATT Y - H E H S W Y - P P I I G R - L H I I T N M N I P G I S R R L L A D D Y T S F L L T - T F L V L A A D Y W Q M T T H H . . . . . . 122412 CGTTGAAGACGGTTCTCGTAGGCTTCTTCAAGTTTCAAATACCAAGCCTAATGCTGTGGT R - R R F S - A S S S F K Y Q A - C C G V E D G S R R L L Q V S N T K P N A V V S L K T V L V G F F K F Q I P S L M L W . . . . . . 122352 TGCTCTAGATGGCAGCGGACAATTCAAGACCATCAAAGAAGCCCTCAAAGGTGTGCCCCC C S R W Q R T I Q D H Q R S P Q R C A P A L D G S G Q F K T I K E A L K G V P P L L - M A A D N S R P S K K P S K V C P . . . . . . 122292 AAAGAACATTCAACCCTATGTCATCTTAATCAAGGCAGGTGAATATAAGGAGATGGTCGA K E H S T L C H L N Q G R - I - G D G R K N I Q P Y V I L I K A G E Y K E M V D Q R T F N P M S S - S R Q V N I R R W S . . . . . . 122232 TATCCCAAGAGGGGTGACAAACGTTGTGTTTATTGGCGAAGGCCCAACCAAGACAAAGAT Y P K R G D K R C V Y W R R P N Q D K D I P R G V T N V V F I G E G P T K T K I I S Q E G - Q T L C L L A K A Q P R Q R . . . . . . : 122172 TACTGGCAACAAGAACTATGCTGATGGCACTGCCACTTTCCATACCTCCACCGTTG : CCGT Y W Q Q E L C - W H C H F P Y L H R C : R T G N K N Y A D G T A T F H T S T V : A V L L A T R T M L M A L P L S I P P P L : P . . . . . . 122024 GAATGGAGATGGTTTCGTAGCAAAGGATATCGGGTTTGAAAACACAGCTGGAGCAATGAA E W R W F R S K G Y R V - K H S W S N E N G D G F V A K D I G F E N T A G A M K - M E M V S - Q R I S G L K T Q L E Q - . . . . . . 121964 GCACCAAGCCGTTGCACTCCGTGTATCAGCAGACAAGACAGTTTTCTACAACTGCAACAT A P S R C T P C I S R Q D S F L Q L Q H H Q A V A L R V S A D K T V F Y N C N I S T K P L H S V Y Q Q T R Q F S T T A T . . . . . . 121904 TGATGGATACCAAGACACGCTATACACACATTCCTACAGACAATTCTACAAAGATTGTTC - W I P R H A I H T F L Q T I L Q R L F D G Y Q D T L Y T H S Y R Q F Y K D C S L M D T K T R Y T H I P T D N S T K I V . . . . . . 121844 CATCTCAGGAACCATTGACTTCATCTTTGGCGATGCATCTGCCGTGTTCCAAAACTGTAA H L R N H - L H L W R C I C R V P K L - I S G T I D F I F G D A S A V F Q N C K P S Q E P L T S S L A M H L P C S K T V . . . . . . 121784 GATGATTGTAAGGAAACCAGGTGCAAACCAAGCTTGTATGGTCACTGCCCAAGGAAGAAA D D C K E T R C K P S L Y G H C P R K K M I V R K P G A N Q A C M V T A Q G R K R - L - G N Q V Q T K L V W S L P K E E . . . . . . 121724 AGACCATCGTGGGGTCGGTGCAATCATTTTGAGGAACTGTGAAATCAGCGCTGAGCCAGC R P S W G R C N H F E E L - N Q R - A S D H R G V G A I I L R N C E I S A E P A K T I V G S V Q S F - G T V K S A L S Q . . . . . . 121664 ATTCATTAACACCCAGCCACCAATCAAAGCCTATCTTGGACGACCATGGAAGGAGTATTC I H - H P A T N Q S L S W T T M E G V F F I N T Q P P I K A Y L G R P W K E Y S H S L T P S H Q S K P I L D D H G R S I . . . . . . 121604 CAGGACAATTATAATGCAAAGTCAGATAGACGCGTTCATTGATCCTGAAGGATGGGCTCC Q D N Y N A K S D R R V H - S - R M G S R T I I M Q S Q I D A F I D P E G W A P P G Q L - C K V R - T R S L I L K D G L . . . . . . 121544 ATGGAATGGTAACTTTGCTCTAAACACTCTGTATTATGCAGAGTATCAGAACAGGGGACC M E W - L C S K H S V L C R V S E Q G T W N G N F A L N T L Y Y A E Y Q N R G P H G M V T L L - T L C I M Q S I R T G D . . . . . . 121484 AGGAGCAAATACTGACAGAAGGGTTAAATGGGCTGGTTATAAGAAAAGCATTTCACCACA R S K Y - Q K G - M G W L - E K H F T T G A N T D R R V K W A G Y K K S I S P Q Q E Q I L T E G L N G L V I R K A F H H . . . . . . 121424 GGAAGCTGAAAAATATGCTCCTAATATCTTCATTGATCAAGATAGCTGGATTAAGAAGAC G S - K I C S - Y L H - S R - L D - E D E A E K Y A P N I F I D Q D S W I K K T R K L K N M L L I S S L I K I A G L R R . . . . . . 121364 TGGCATTTCCTATTGATGAATCTGTAACAACTTTAATTATAAATCTTATCTTCTACTGAT W H F L L M N L - Q L - L - I L S S T D G I S Y - - I C N N F N Y K S Y L L L I L A F P I D E S V T T L I I N L I F Y - . . . . . . 121304 TAAAAAATAAAAATAACTATCCAACTTATGTTTATTTAGTTGCTTTTCTAGCTATGTCAT - K I K I T I Q L M F I - L L F - L C H K K - K - L S N L C L F S C F S S Y V M L K N K N N Y P T Y V Y L V A F L A M S . . . . . . 121244 GTAATACTTAATTAGTTTTAGTTTATTCATATTTTATGTCTTAGCTTATGCAA V I L N - F - F I H I L C L S L C - Y L I S F S L F I F Y V L A Y A C N T - L V L V Y S Y F M S - L M Q Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-18_AGS-1_PPS_1 (123098 122117,122028 121349) (frame '2'; 1659 bp, 553 residues) 1 KHQNIMAKKL VIGGIASILV VACVVAACVT ITKKNASDGG DGASNGGIST STKSVQAMCQ 61 PTDYKEACEK SLASAKNTSD PKELIKVAFE STITDIKNAI KNTDLIKDAA NDPRTKEALN 121 TCDGLLDVSI DDLRRSFDKV GTFDINKIKD YTDDLKTWIS ASITYQETCL DAFQNTSGDT 181 GEKMKKLLKT AGELTSNGLA MITSFGDMLT NMNIPGISRR LLADDYTSFV EDGSRRLLQV 241 SNTKPNAVVA LDGSGQFKTI KEALKGVPPK NIQPYVILIK AGEYKEMVDI PRGVTNVVFI 301 GEGPTKTKIT GNKNYADGTA TFHTSTVAVN GDGFVAKDIG FENTAGAMKH QAVALRVSAD 361 KTVFYNCNID GYQDTLYTHS YRQFYKDCSI SGTIDFIFGD ASAVFQNCKM IVRKPGANQA 421 CMVTAQGRKD HRGVGAIILR NCEISAEPAF INTQPPIKAY LGRPWKEYSR TIIMQSQIDA 481 FIDPEGWAPW NGNFALNTLY YAEYQNRGPG ANTDRRVKWA GYKKSISPQE AEKYAPNIFI 541 DQDSWIKKTG ISY- AGS-2 (123174 123017,122955 122547) SCR (e 1.000 d 0.000 a 0.000,e 0.984) Exon 1 123174 123017 ( 158 n); score: 1.000 Intron 1 123016 122956 ( 61 n); Pd: 0.000 Pa: 0.000 Exon 2 122955 122547 ( 409 n); score: 0.984 PGS (123173 123017,122955 122547) SGN-E330596+ PGS (123174 123017,122955 122641) SGN-E394601+ 3-phase translation of AGS-2 (-strand): . . . . . . 123174 AAAAAATCCCCAAAAGCTCTCTATCGATTTAACTATACAAAAACATTTTTTTTTTTACTT K K S P K A L Y R F N Y T K T F F F L L K N P Q K L S I D L T I Q K H F F F Y F K I P K S S L S I - L Y K N I F F F T . . . . . . 123114 TGGGAAAAATACATAAAAGCATCAAAATATTATGGCTAAAAAATTAGTCATTGGTGGCAT W E K Y I K A S K Y Y G - K I S H W W H G K N T - K H Q N I M A K K L V I G G I L G K I H K S I K I L W L K N - S L V A . . . . : . . 123054 AGCCTCAATTCTTGTGGTGGCTTGTGTTGTTGCAGCAT : TTCAACCTCTACAAAATCTGTT S L N S C G G L C C C S I : S T S T K S V A S I L V V A C V V A A : F Q P L Q N L F - P Q F L W W L V L L Q H : F N L Y K I C . . . . . . 122933 CAAGCAATGTGTCAACCTACTGACTACAAAGAAGCTTGTGAGAAGAGTCTTGCATCAGCC Q A M C Q P T D Y K E A C E K S L A S A K Q C V N L L T T K K L V R R V L H Q P S S N V S T Y - L Q R S L - E E S C I S . . . . . . 122873 AAGAACACTAGTGACCCAAAGGAACTTATAAAAGTTGCATTTGAATCAACCATAACTGAC K N T S D P K E L I K V A F E S T I T D R T L V T Q R N L - K L H L N Q P - L T Q E H - - P K G T Y K S C I - I N H N - . . . . . . 122813 ATAAAAAATGCCATAAAAAATACTGACTTGATCAAGGATGCAGCCAATGATCCTAGAACA I K N A I K N T D L I K D A A N D P R T - K M P - K I L T - S R M Q P M I L E Q H K K C H K K Y - L D Q G C S Q - S - N . . . . . . 122753 AAAGAGGCTCTAAATACTTGTGACGGTCTTCTTGATGTGTCTATTGATGATCTCAGAAGA K E A L N T C D G L L D V S I D D L R R K R L - I L V T V F L M C L L M I S E D K R G S K Y L - R S S - C V Y - - S Q K . . . . . . 122693 TCGTTCGATAAAGTTGGCACCTTTGATATTAACAAGATCAAGGATTATACCGATGATCTA S F D K V G T F D I N K I K D Y T D D L R S I K L A P L I L T R S R I I P M I - I V R - S W H L - Y - Q D Q G L Y R - S . . . . . . 122633 AAAACATGGATCAGTGCTTCGATTACTTATCAAGAAACTTGCTTAGATGCTTTTCAAAAC K T W I S A S I T Y Q E T C L D A F Q N K H G S V L R L L I K K L A - M L F K T K N M D Q C F D Y L S R N L L R C F S K . . . 122573 ACAAGTGGTGACACTGGTGAAAAAATG T S G D T G E K M Q V V T L V K K H K W - H W - K N Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-18_AGS-2_PPS_1 (123075 123017,122955 122547) (frame '1'; 468 bp, 156 residues) 1 KISHWWHSLN SCGGLCCCSI STSTKSVQAM CQPTDYKEAC EKSLASAKNT SDPKELIKVA 61 FESTITDIKN AIKNTDLIKD AANDPRTKEA LNTCDGLLDV SIDDLRRSFD KVGTFDINKI 121 KDYTDDLKTW ISASITYQET CLDAFQNTSG DTGEKM PGL 19 (- strand): 128113 126703 AGS-1 (128113 128091,127231 126703) SCR (e 0.739 d 0.900 a 0.000,e 0.961) Exon 1 128113 128091 ( 23 n); score: 0.739 Intron 1 128090 127232 ( 859 n); Pd: 0.900 Pa: 0.000 Exon 2 127231 126703 ( 529 n); score: 0.961 PGS (126940 126703) SGN-E332471+ PGS (126884 126708) SGN-E378094+ PGS (126884 126708) SGN-E227035+ PGS (126884 126710) SGN-E392260+ PGS (127147 126735) SGN-E202664- PGS (128113 128091,127231 127052) SGN-E577982+ 3-phase translation of AGS-1 (-strand): . . . : . . . 128113 AACCCAAATTTTGAATTATTTGG : ACATACGAAGGGGAACAACCTTAGTTTCAAGAGTTTA N P N F E L F G : H T K G N N L S F K S L T Q I L N Y L : D I R R G T T L V S R V - P K F - I I W : T Y E G E Q P - F Q E F . . . . . . 127194 AGAAACGTCCGAAAGAAAGTACTCTTGGAGAAAGAATTCCATGAGAGAAACTCATACCTT R N V R K K V L L E K E F H E R N S Y L E T S E R K Y S W R K N S M R E T H T L K K R P K E S T L G E R I P - E K L I P . . . . . . 127134 AATCGATGTTCAAACTTTAATGTTGCTGCCCGGAAAACTCCTCCAAACCACTCCCAATTC N R C S N F N V A A R K T P P N H S Q F I D V Q T L M L L P G K L L Q T T P N S - S M F K L - C C C P E N S S K P L P I . . . . . . 127074 ACTTCAAAGTATACCTCTCTCGACGAACCTCTCTTAGCCTTGACGTTTTGATTACTTTTT T S K Y T S L D E P L L A L T F - L L F L Q S I P L S T N L S - P - R F D Y F F H F K V Y L S R R T S L S L D V L I T F . . . . . . 127014 CTTTTGCTTAAAAAAATTTTTTGTGAGTTCTTCAAGCATGAAAATTATTGATATTTTGGC L L L K K I F C E F F K H E N Y - Y F G F C L K K F F V S S S S M K I I D I L A S F A - K N F L - V L Q A - K L L I F W . . . . . . 126954 AGAAATAATGTGAGGAAGATGGAGAACGTGAGAGAGGGAGTTTAGAAGCGTGAGAGAGAG R N N V R K M E N V R E G V - K R E R E E I M - G R W R T - E R E F R S V R E R Q K - C E E D G E R E R G S L E A - E R . . . . . . 126894 AGAGGGCTAATTGGATTAGGAGACTAATTCAAGAATTAGTCAAATAACATTAAAATAAAT R G L I G L G D - F K N - S N N I K I N E G - L D - E T N S R I S Q I T L K - I E R A N W I R R L I Q E L V K - H - N K . . . . . . 126834 AAATACAAATCTGTTTTATTTATTTATTTATTTATTCATTTAAAACGTGAAAGGACAATT K Y K S V L F I Y L F I H L K R E R T I N T N L F Y L F I Y L F I - N V K G Q L - I Q I C F I Y L F I Y S F K T - K D N . . . . . . 126774 ATGCCCTTAAATACCTATTTATTCTTATTTACATAATTCTCTTCTCTTTTTTTTCGAATC M P L N T Y L F L F T - F S S L F F R I C P - I P I Y S Y L H N S L L F F F E S Y A L K Y L F I L I Y I I L F S F F S N . . 126714 GTTACAATAATA V T I I L Q - R Y N N Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1-_PGL-19_AGS-1_PPS_1 (128113 128091,127231 127024) (frame '1'; 228 bp, 76 residues) 1 NPNFELFGHT KGNNLSFKSL RNVRKKVLLE KEFHERNSYL NRCSNFNVAA RKTPPNHSQF 61 TSKYTSLDEP LLALTF- PGL 20 (+ strand): 128960 130003 AGS-1 (128960 129352) SCR (e 0.805) Exon 1 128960 129352 ( 393 n); score: 0.805 PGS (128960 129352) SGN-E389994+ PGS (128960 129352) SGN-E235464+ 3-phase translation of AGS-1 (+strand): . . . . . . 128960 ATAAAGAAATAAATGATACCGAAGGTGTTAGGATAGGATAATCAAGAGGTGAGCTAGATT I K K - M I P K V L G - D N Q E V S - I - R N K - Y R R C - D R I I K R - A R F K E I N D T E G V R I G - S R G E L D . . . . . . 129020 CAGGTAATGACATTAGGTCATTCCTGATCATTGCACAGCAAACCCGATGAGAGTCTTAAA Q V M T L G H S - S L H S K P D E S L K R - - H - V I P D H C T A N P M R V L N S G N D I R S F L I I A Q Q T R - E S - . . . . . . 129080 CTACATCCTAGGTATAGCTGGTGTTCGCACTGGCCTATGAATGAATTGAAATGAAATACG L H P R Y S W C S H W P M N E L K - N T Y I L G I A G V R T G L - M N - N E I R T T S - V - L V F A L A Y E - I E M K Y . . . . . . 129140 AATGAATGAGTGAAGCAGACTCTGTGTTTGCTAAAGAAGGCTCCCTAGTTGAGGTCCCAT N E - V K Q T L C L L K K A P - L R S H M N E - S R L C V C - R R L P S - G P I E - M S E A D S V F A K E G S L V E V P . . . . . . 129200 ATGTTGAGCCCTCATTTTGGAAAGTCTTAAAGTTAAGTCTATGATAATAAGGTCTCATGG M L S P H F G K S - S - V Y D N K V S W C - A L I L E S L K V K S M I I R S H G Y V E P S F W K V L K L S L - - - G L M . . . . . . 129260 TATACGAATGAATAATATGAAAGAAAGTATGTGTTATATGTTATGTGTTATATGAATATG Y T N E - Y E R K Y V L Y V M C Y M N M I R M N N M K E S M C Y M L C V I - I C V Y E - I I - K K V C V I C Y V L Y E Y . . . . 129320 TTATGTTTTGTGTGCTATACGATAATTATAATG L C F V C Y T I I I M Y V L C A I R - L - V M F C V L Y D N Y N Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 129352 CATTATAATTATCGTATAGCACACAAAACATAACATATTCATATAACACATAACATATAA H Y N Y R I A H K T - H I H I T H N I - I I I I V - H T K H N I F I - H I T Y N L - L S Y S T Q N I T Y S Y N T - H I . . . . . . 129292 CACATACTTTCTTTCATATTATTCATTCGTATACCATGAGACCTTATTATCATAGACTTA H I L S F I L F I R I P - D L I I I D L T Y F L S Y Y S F V Y H E T L L S - T - T H T F F H I I H S Y T M R P Y Y H R L . . . . . . 129232 ACTTTAAGACTTTCCAAAATGAGGGCTCAACATATGGGACCTCAACTAGGGAGCCTTCTT T L R L S K M R A Q H M G P Q L G S L L L - D F P K - G L N I W D L N - G A F F N F K T F Q N E G S T Y G T S T R E P S . . . . . . 129172 TAGCAAACACAGAGTCTGCTTCACTCATTCATTCGTATTTCATTTCAATTCATTCATAGG - Q T Q S L L H S F I R I S F Q F I H R S K H R V C F T H S F V F H F N S F I G L A N T E S A S L I H S Y F I S I H S - . . . . . . 129112 CCAGTGCGAACACCAGCTATACCTAGGATGTAGTTTAAGACTCTCATCGGGTTTGCTGTG P V R T P A I P R M - F K T L I G F A V Q C E H Q L Y L G C S L R L S S G L L C A S A N T S Y T - D V V - D S H R V C C . . . . . . 129052 CAATGATCAGGAATGACCTAATGTCATTACCTGAATCTAGCTCACCTCTTGATTATCCTA Q - S G M T - C H Y L N L A H L L I I L N D Q E - P N V I T - I - L T S - L S Y A M I R N D L M S L P E S S S P L D Y P . . . . 128992 TCCTAACACCTTCGGTATCATTTATTTCTTTAT S - H L R Y H L F L Y P N T F G I I Y F F I L T P S V S F I S L Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (129375 130003) SCR (e 0.815) Exon 1 129375 130003 ( 629 n); score: 0.815 PGS (129375 129711) SGN-E389503- PGS (129536 129788) SGN-E217225- PGS (129536 129788) SGN-E222944- PGS (129536 129788) SGN-E223449- PGS (129783 130003) SGN-E546254+ PGS (129888 129993) SGN-E378094+ PGS (129888 129993) SGN-E227035+ 3-phase translation of AGS-2 (+strand): . . . . . . 129375 AACTTTCCCAATCTTAATTTGGCAAGTCCACTGACTTGACTTCCAAAAATCATGTTGTTA N F P N L N L A S P L T - L P K I M L L T F P I L I W Q V H - L D F Q K S C C - L S Q S - F G K S T D L T S K N H V V . . . . . . 129435 GGAAAGAGCTATTCTTCCTCATGCATGTCCCTGGTGTGTACTTGCATATACTCATACTTA G K S Y S S S C M S L V C T C I Y S Y L E R A I L P H A C P W C V L A Y T H T - R K E L F F L M H V P G V Y L H I L I L . . . . . . 129495 GTACAAGTGTGTACTAATTCCATACGAACATCTACTTTTAGGTGCAGGCACAGGTGGACG V Q V C T N S I R T S T F R C R H R W T Y K C V L I P Y E H L L L G A G T G G R S T S V Y - F H T N I Y F - V Q A Q V D . . . . . . 129555 CTAGAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGT L E L Q V R C C S Y P D I S I H P E F G - S Y R F V V A A I R T S V F I R S L V A R A T G S L L Q L S G H Q Y S S G V W . . . . . . 129615 AGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAG R S S C F R G C Y C F T F - R S F R V E G P H A F E D A T V L H S S V V L E L S - V L M L S R M L L F Y I L A - F - S - . . . . . . 129675 CTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTG L A E H V P L A F L S C F G S N F V L V - R S M F H - R F F P V L V Q T L Y W C A S G A C S T S V S F L F W F K L C I G . . . . . . 129735 CTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCT L F W P I Y N - Y L M N Y F F Q L L I S Y F G R Y T I N T - - I I S F S C L S L A I L A D I Q L I L N E L F L S V A Y L . . . . . . 129795 TAAATGTTAGATGGTTGATGATGAACGATTACGAAATGTTAAGAATGTTCAGCAAGTATG - M L D G - - - T I T K C - E C S A S M K C - M V D D E R L R N V K N V Q Q V - L N V R W L M M N D Y E M L R M F S K Y . . . . . . 129855 ATTAAAGAATCAAAAACTTCAAATTTTCCGCTAAAATTAATCTATGTAAAGTAAGAATGA I K E S K T S N F P L K L I Y V K - E - L K N Q K L Q I F R - N - S M - S K N D D - R I K N F K F S A K I N L C K V R M . . . . . . 129915 CGTAAGCAGGCTTGTCTGCGACCTCTGAGAGGTCAACGACGCCGGTCTCGTCTGGGGTCT R K Q A C L R P L R G Q R R R S R L G S V S R L V C D L - E V N D A G L V W G L T - A G L S A T S E R S T T P V S S G V . . . 129975 AGATTCCGGTCGTGACAAAGTTGGTATCA R F R S - Q S W Y D S G R D K V G I - I P V V T K L V S Maximal non-overlapping open reading frames (>= 64 codons): >C01HBa0163B20.1+_PGL-20_AGS-2_PPS_1 (129414 129656) (frame '1'; 240 bp, 80 residues) 1 LPKIMLLGKS YSSSCMSLVC TCIYSYLVQV CTNSIRTSTF RCRHRWTLEL QVRCCSYPDI 61 SIHPEFGRSS CFRGCYCFTF - 3-phase translation of AGS-2 (-strand): . . . . . . 130003 TGATACCAACTTTGTCACGACCGGAATCTAGACCCCAGACGAGACCGGCGTCGTTGACCT - Y Q L C H D R N L D P R R D R R R - P D T N F V T T G I - T P D E T G V V D L I P T L S R P E S R P Q T R P A S L T . . . . . . 129943 CTCAGAGGTCGCAGACAAGCCTGCTTACGTCATTCTTACTTTACATAGATTAATTTTAGC L R G R R Q A C L R H S Y F T - I N F S S E V A D K P A Y V I L T L H R L I L A S Q R S Q T S L L T S F L L Y I D - F - . . . . . . 129883 GGAAAATTTGAAGTTTTTGATTCTTTAATCATACTTGCTGAACATTCTTAACATTTCGTA G K F E V F D S L I I L A E H S - H F V E N L K F L I L - S Y L L N I L N I S - R K I - S F - F F N H T C - T F L T F R . . . . . . 129823 ATCGTTCATCATCAACCATCTAACATTTAAGAGATAAGCAACTGAAAGAAATAATTCATT I V H H Q P S N I - E I S N - K K - F I S F I I N H L T F K R - A T E R N N S L N R S S S T I - H L R D K Q L K E I I H . . . . . . 129763 AAGTATTAATTGTATATCGGCCAAAATAGCACCAATACAAAGTTTGAACCAAAACAGGAA K Y - L Y I G Q N S T N T K F E P K Q E S I N C I S A K I A P I Q S L N Q N R K - V L I V Y R P K - H Q Y K V - T K T G . . . . . . 129703 AGAAACGCTAGTGGAACATGCTCCGCTAGCTCAACTCTAAAACTACGCTAGAATGTAAAA R N A S G T C S A S S T L K L R - N V K E T L V E H A P L A Q L - N Y A R M - N K K R - W N M L R - L N S K T T L E C K . . . . . . 129643 CAGTAGCATCCTCGAAAGCATGAGGACCTACCAAACTCCGGATGAATACTGATGTCCGGA Q - H P R K H E D L P N S G - I L M S G S S I L E S M R T Y Q T P D E Y - C P D T V A S S K A - G P T K L R M N T D V R . . . . . . 129583 TAGCTGCAACAACGAACCTGTAGCTCTAGCGTCCACCTGTGCCTGCACCTAAAAGTAGAT - L Q Q R T C S S S V H L C L H L K V D S C N N E P V A L A S T C A C T - K - M I A A T T N L - L - R P P V P A P K S R . . . . . . 129523 GTTCGTATGGAATTAGTACACACTTGTACTAAGTATGAGTATATGCAAGTACACACCAGG V R M E L V H T C T K Y E Y M Q V H T R F V W N - Y T L V L S M S I C K Y T P G C S Y G I S T H L Y - V - V Y A S T H Q . . . . . . 129463 GACATGCATGAGGAAGAATAGCTCTTTCCTAACAACATGATTTTTGGAAGTCAAGTCAGT D M H E E E - L F P N N M I F G S Q V S T C M R K N S S F L T T - F L E V K S V G H A - G R I A L S - Q H D F W K S S Q . . . 129403 GGACTTGCCAAATTAAGATTGGGAAAGTT G L A K L R L G K D L P N - D W E S W T C Q I K I G K V Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Mon Aug 28 17:44:24 2006