BLASTP 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Eggplant Genome V4.1 proteins 34,916 sequences; 12,796,370 total letters Query= AT5G28640.1 Length=257 Score E Sequences producing significant alignments: (Bits) Value SMEL4.1_11g026070.1.01gene=SMEL4.1_11g026070.1 Name:"Similar to G... 182 1e-57 SMEL4.1_11g004650.1.01gene=SMEL4.1_11g004650.1 Name:"Similar to G... 162 2e-49 SMEL4.1_11g026790.1.01gene=SMEL4.1_11g026790.1 Name:"Similar to G... 99.4 7e-26 SMEL4.1_04g000820.1.01gene=SMEL4.1_04g000820.1 Name:"Similar to G... 97.1 1e-24 SMEL4.1_03g019210.1.01gene=SMEL4.1_03g019210.1 Name:"Similar to G... 88.6 2e-21 >SMEL4.1_11g026070.1.01 gene=SMEL4.1_11g026070.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=209 Score = 182 bits (462), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 141/216 (65%), Positives = 154/216 (71%), Gaps = 15/216 (7%) Query 48 MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 107 MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR Sbjct 1 MQQHLMQMQPMMAAYYPTNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60 Query 108 NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAAR- 166 NLMYLAAIADSQPQP S+HSQ+ S GGM+Q G+H QQQ Q QQM Q LMAAR Sbjct 61 NLMYLAAIADSQPQPSSMHSQFSS--GGMMQ--PGTHNYLQQQQQQVQQMATQQLMAARS 116 Query 167 SSMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA----GGF-HDF 221 SSMLY QQQQQ Q Q H SS GG + H+LQ E+ GGF HDF Sbjct 117 SSMLYGQQQQQPQLSPFQQGL---HGSQLGMSSGSGGSTGLHHMLQSESSPHGGGFSHDF 173 Query 222 GRG-KPEMGSGGGGE-GRGGSSGDGGETLYLKSSDD 255 R K ++GS E G S GDGGE LYLK+S+D Sbjct 174 VRANKQDIGSSMSAEGRGGNSGGDGGENLYLKASED 209 >SMEL4.1_11g004650.1.01 gene=SMEL4.1_11g004650.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=228 Score = 162 bits (410), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 133/225 (59%), Positives = 151/225 (67%), Gaps = 37/225 (16%) Query 60 AGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQ 119 A YYP+NVT+DHIQQ+LDENKSLILKIVESQNSGKLSECAE+QA+LQRNLMYLAAIADSQ Sbjct 14 ASYYPNNVTTDHIQQFLDENKSLILKIVESQNSGKLSECAESQAKLQRNLMYLAAIADSQ 73 Query 120 PQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAA--RSSMLYAQQQQQ 177 PQPPS+HSQ SA GM+Q GG+HY Q Q QQ+T QSLMAA SSMLY QQQQ Sbjct 74 PQPPSMHSQLSSA--GMMQ--GGAHY---LQQQQVQQLTTQSLMAAARSSSMLYGQQQQP 126 Query 178 QQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGE--------------AGGFHDFGR 223 ++LQ +HS SSSGGG S GLH+LQ + GGF DF R Sbjct 127 L---SSLQQAAAYHSHQLGMSSSGGGCSGGLHMLQSDNTHSASISLGGGDGGGGFPDFSR 183 Query 224 G-----KPEMGSGGGGE------GRGGSSGDGGETLYLKSSDDGN 257 G K EMGS + G +GDGGE LYLKSS++GN Sbjct 184 GLGSGNKLEMGSSMSDQGRGGSSSGHGHAGDGGENLYLKSSEEGN 228 >SMEL4.1_11g026790.1.01 gene=SMEL4.1_11g026790.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=161 Score = 99.4 bits (246), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 102/222 (46%), Positives = 108/222 (49%), Gaps = 84/222 (38%) Query 59 MAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 118 MAGYYP+N IVES+NSGKLSECAE+QA+LQRNLMYLAAIADS Sbjct 1 MAGYYPNN-------------------IVESKNSGKLSECAESQAKLQRNLMYLAAIADS 41 Query 119 QPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQQQQQQ 178 QPQPP SSMLY QQQQQ Sbjct 42 QPQPP----------------------------------------IRSSSMLYGQQQQQP 61 Query 179 QPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGE--------------AGGFHDFGRG 224 Q H QLGMSSS GGSSGLH+LQ E GGF DF RG Sbjct 62 LSSLQQQQAAYHSHQLGMSSSG--GGSSGLHMLQSENTHSASISLGGVDGGGGFPDFSRG 119 Query 225 -----KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 257 K EMGS +GRGGSS GDGGE LYL SS DGN Sbjct 120 LGSGNKQEMGSSLSDQGRGGSSSGHAGDGGENLYLISSGDGN 161 >SMEL4.1_04g000820.1.01 gene=SMEL4.1_04g000820.1 Name:"Similar to GIF3 GRF1-interacting factor 3 (Arabidopsis thaliana OX=3702)" Length=199 Score = 97.1 bits (240), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/185 (39%), Positives = 100/185 (54%), Gaps = 22/185 (12%) Query 63 YPS-NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQ 121 +PS ++T++ IQ+YLDENK+LIL I++ QN GKL+ECA+ QA+LQ+NLMYLAAIAD+QPQ Sbjct 14 FPSASITTEQIQKYLDENKTLILAILDHQNLGKLAECAQYQAKLQKNLMYLAAIADAQPQ 73 Query 122 PPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQQQQQQQPY 181 P++ +Q M Q G Y+Q QA MTQQ M + + Q Sbjct 74 SPAIPTQM-PPHPAMQQ---GGFYMQHPQAA---AMTQQQGM-------FPSKMPLQFNT 119 Query 182 ATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSGGGGEGRGGSS 241 A Q Q + GG +SG+H G A ++ + G G+ RGG+ Sbjct 120 AQQLQDQHQQLQRQQQAMQLGGANSGMHSTLGGA-------SNSSQLTTSGAGDARGGNK 172 Query 242 GDGGE 246 D E Sbjct 173 QDNSE 177 >SMEL4.1_03g019210.1.01 gene=SMEL4.1_03g019210.1 Name:"Similar to GIF2 GRF1-interacting factor 2 (Arabidopsis thaliana OX=3702)" Length=202 Score = 88.6 bits (218), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 42/65 (65%), Positives = 54/65 (83%), Gaps = 0/65 (0%) Query 65 SNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPS 124 S +T++ IQ++LDENK+LIL I+E+QN GKLSECA+ QA LQ+NLMYLAAIAD+QPQ + Sbjct 24 SAITTEQIQKFLDENKNLILAILENQNLGKLSECAQYQAMLQKNLMYLAAIADAQPQQSA 83 Query 125 VHSQY 129 SQ Sbjct 84 ATSQL 88 Lambda K H a alpha 0.312 0.128 0.367 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1505522880 Query= AT1G01160.2 Length=229 Score E Sequences producing significant alignments: (Bits) Value SMEL4.1_04g000820.1.01gene=SMEL4.1_04g000820.1 Name:"Similar to G... 106 2e-28 SMEL4.1_03g019210.1.01gene=SMEL4.1_03g019210.1 Name:"Similar to G... 89.4 5e-22 SMEL4.1_11g004650.1.01gene=SMEL4.1_11g004650.1 Name:"Similar to G... 79.3 6e-18 SMEL4.1_11g026070.1.01gene=SMEL4.1_11g026070.1 Name:"Similar to G... 78.6 8e-18 SMEL4.1_11g026790.1.01gene=SMEL4.1_11g026790.1 Name:"Similar to G... 61.6 6e-12 >SMEL4.1_04g000820.1.01 gene=SMEL4.1_04g000820.1 Name:"Similar to GIF3 GRF1-interacting factor 3 (Arabidopsis thaliana OX=3702)" Length=199 Score = 106 bits (264), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/148 (47%), Positives = 82/148 (55%), Gaps = 47/148 (32%) Query 18 PANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLDYLDENKKLIMAIME 77 P+ +ITTEQIQK YLDENK LI+AI++ Sbjct 15 PSASITTEQIQK----------------------------------YLDENKTLILAILD 40 Query 78 NQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPS 137 +QNLGKLAECAQYQA LQKNLMYLAAIADAQP P A+ QM PH MQ Sbjct 41 HQNLGKLAECAQYQAKLQKNLMYLAAIADAQPQSP--------AIPTQM-PPHPAMQQGG 91 Query 138 YFMQHPQASPA----GIFAPRGPLQFGS 161 ++MQHPQA+ G+F + PLQF + Sbjct 92 FYMQHPQAAAMTQQQGMFPSKMPLQFNT 119 >SMEL4.1_03g019210.1.01 gene=SMEL4.1_03g019210.1 Name:"Similar to GIF2 GRF1-interacting factor 2 (Arabidopsis thaliana OX=3702)" Length=202 Score = 89.4 bits (220), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 78/172 (45%), Positives = 94/172 (55%), Gaps = 16/172 (9%) Query 64 YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123 +LDENK LI+AI+ENQNLGKL+ECAQYQA+LQKNLMYLAAIADAQP S +T+ Sbjct 34 FLDENKNLILAILENQNLGKLSECAQYQAMLQKNLMYLAAIADAQPQ-----QSAATSQL 88 Query 124 AQMATPHSGMQPPSYFMQHPQASPAGIFAPRGPLQFGS-PLQFQDPQQQQQIHQQAMQGH 182 +TP G Q Q G+ + P Q + P Q Q Q Q QQ QG Sbjct 89 QAPSTPQVGNQ--MQQTQAALQQQQGVAVSKLPFQLNALPSQEQQQQMLQFQQQQQFQGQ 146 Query 183 MGIRPMGMTNNGMQHAMQQPETGLGGNVGLRGGKQDG-----ADGQGKDDGK 229 G P NN M+ M QP GN+ +RG KQ +DG GK G+ Sbjct 147 YGFGPTA--NNAMRQLM-QPGLSSSGNLDVRGNKQGSLEGNPSDGLGKSAGR 195 >SMEL4.1_11g004650.1.01 gene=SMEL4.1_11g004650.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=228 Score = 79.3 bits (194), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 37/58 (64%), Positives = 47/58 (81%), Gaps = 0/58 (0%) Query 64 YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTA 121 +LDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMYLAAIAD+QP PP+ S+A Sbjct 29 FLDENKSLILKIVESQNSGKLSECAESQAKLQRNLMYLAAIADSQPQPPSMHSQLSSA 86 >SMEL4.1_11g026070.1.01 gene=SMEL4.1_11g026070.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=209 Score = 78.6 bits (192), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 35/111 (32%) Query 3 QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62 QQ QM PM+ + P N +TT+ IQ+ Sbjct 2 QQHLMQMQPMMAAYYPTN-VTTDHIQQ--------------------------------- 27 Query 63 DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPT 113 YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMYLAAIAD+QP P + Sbjct 28 -YLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPSS 77 >SMEL4.1_11g026790.1.01 gene=SMEL4.1_11g026790.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=161 Score = 61.6 bits (148), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 0/43 (0%) Query 75 IMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPS 117 I+E++N GKL+ECA+ QA LQ+NLMYLAAIAD+QP PP S Sbjct 9 IVESKNSGKLSECAESQAKLQRNLMYLAAIADSQPQPPIRSSS 51 Lambda K H a alpha 0.316 0.132 0.405 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1256109722 Query= AT4G00850.1 Length=223 Score E Sequences producing significant alignments: (Bits) Value SMEL4.1_04g000820.1.01gene=SMEL4.1_04g000820.1 Name:"Similar to G... 139 3e-41 SMEL4.1_03g019210.1.01gene=SMEL4.1_03g019210.1 Name:"Similar to G... 112 1e-30 SMEL4.1_11g026070.1.01gene=SMEL4.1_11g026070.1 Name:"Similar to G... 98.2 2e-25 SMEL4.1_11g004650.1.01gene=SMEL4.1_11g004650.1 Name:"Similar to G... 97.1 1e-24 SMEL4.1_11g026790.1.01gene=SMEL4.1_11g026790.1 Name:"Similar to G... 63.9 9e-13 >SMEL4.1_04g000820.1.01 gene=SMEL4.1_04g000820.1 Name:"Similar to GIF3 GRF1-interacting factor 3 (Arabidopsis thaliana OX=3702)" Length=199 Score = 139 bits (350), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/203 (48%), Positives = 119/203 (59%), Gaps = 18/203 (9%) Query 17 PTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQP 76 P+ +ITTEQIQKYLDENK LI+AIL++QNLGKLAECAQYQA LQKNLMYLAAIADAQPQ Sbjct 15 PSASITTEQIQKYLDENKTLILAILDHQNLGKLAECAQYQAKLQKNLMYLAAIADAQPQS 74 Query 77 PAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPGIFPPRGPLQFGSPHQ 136 PA P M P+P+ Q ++MQ QA M QQ G+FP + PLQF + Q Sbjct 75 PA--------IPTQMPPHPAMQQ--GGFYMQHPQAAAMTQQ--QGMFPSKMPLQFNTAQQ 122 Query 137 FLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANNAGPNDASGGGKPDGT 196 D QQL +Q +G N+G+ + + +G DA GG K D + Sbjct 123 LQDQHQQLQRQQQAMQLG------GANSGMHSTLGGASNSSQLTTSGAGDARGGNKQDNS 176 Query 197 NMSQSGADGQGGSAARHGGGDAK 219 SGADGQ S + G + K Sbjct 177 EAEPSGADGQASSVSAQGSEEPK 199 >SMEL4.1_03g019210.1.01 gene=SMEL4.1_03g019210.1 Name:"Similar to GIF2 GRF1-interacting factor 2 (Arabidopsis thaliana OX=3702)" Length=202 Score = 112 bits (279), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 54/64 (84%), Positives = 59/64 (92%), Gaps = 0/64 (0%) Query 17 PTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQP 76 P + ITTEQIQK+LDENK LI+AILENQNLGKL+ECAQYQA+LQKNLMYLAAIADAQPQ Sbjct 22 PLSAITTEQIQKFLDENKNLILAILENQNLGKLSECAQYQAMLQKNLMYLAAIADAQPQQ 81 Query 77 PAAT 80 AAT Sbjct 82 SAAT 85 >SMEL4.1_11g026070.1.01 gene=SMEL4.1_11g026070.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=209 Score = 98.2 bits (243), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 4/83 (5%) Query 6 QMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMY 65 QM PM+ +P N+TT+ IQ+YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMY Sbjct 7 QMQPMMAAYYP--TNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMY 64 Query 66 LAAIADAQPQPPA--ATLTSGAM 86 LAAIAD+QPQP + + +SG M Sbjct 65 LAAIADSQPQPSSMHSQFSSGGM 87 >SMEL4.1_11g004650.1.01 gene=SMEL4.1_11g004650.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=228 Score = 97.1 bits (240), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 47/75 (63%), Positives = 62/75 (83%), Gaps = 3/75 (4%) Query 14 SFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQ 73 S+ P NN+TT+ IQ++LDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMYLAAIAD+Q Sbjct 15 SYYP-NNVTTDHIQQFLDENKSLILKIVESQNSGKLSECAESQAKLQRNLMYLAAIADSQ 73 Query 74 PQPPA--ATLTSGAM 86 PQPP+ + L+S M Sbjct 74 PQPPSMHSQLSSAGM 88 >SMEL4.1_11g026790.1.01 gene=SMEL4.1_11g026790.1 Name:"Similar to GIF1 GRF1-interacting factor 1 (Arabidopsis thaliana OX=3702)" Length=161 Score = 63.9 bits (154), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 28/38 (74%), Positives = 35/38 (92%), Gaps = 0/38 (0%) Query 40 ILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPP 77 I+E++N GKL+ECA+ QA LQ+NLMYLAAIAD+QPQPP Sbjct 9 IVESKNSGKLSECAESQAKLQRNLMYLAAIADSQPQPP 46 Lambda K H a alpha 0.313 0.129 0.383 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1199443118 Database: Eggplant Genome V4.1 proteins Posted date: Mar 25, 2024 4:41 PM Number of letters in database: 12,796,370 Number of sequences in database: 34,916 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40