BLASTP 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Nitab v4.5 proteins Edwards2017 69,500 sequences; 24,411,417 total letters Query= Untitled_sequence Length=561 Score E Sequences producing significant alignments: (Bits) Value Nitab4.5_0000265g0030.1FAD linked oxidase, N-terminal, FAD-bindin... 942 0.0 Nitab4.5_0008761g0020.1FAD linked oxidase, N-terminal, CO dehydro... 918 0.0 Nitab4.5_0001219g0170.1CO dehydrogenase flavoprotein-like, FAD-bi... 914 0.0 Nitab4.5_0012697g0010.1FAD linked oxidase, N-terminal, CO dehydro... 328 4e-108 Nitab4.5_0000876g0110.1CO dehydrogenase flavoprotein-like, FAD-bi... 326 2e-107 >Nitab4.5_0000265g0030.1 FAD linked oxidase, N-terminal, FAD-binding, type 2, CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Length=575 Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/564 (81%), Positives = 507/564 (90%), Gaps = 4/564 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSDL+ PL RPKRKK VDY V+FRWIIVIF VLP S +YF IYLGD+ S+ KSF+KRQ Sbjct 9 MSDLEVPL-RPKRKKNLVDYLVQFRWIIVIFFVLPLSFLYYFSIYLGDVRSDCKSFKKRQ 67 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHD NVKKV+KRLK R+ASKDGLVCTARKPW+AVGMRNVDYKRARHFEVDL FRN+L+ Sbjct 68 KEHDNNVKKVVKRLKERNASKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLD 127 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF Sbjct 128 IDKERMVARVEPLVNMGQISRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 187 Query 181 ADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLTY 240 +DTV +YEI+LA G++VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI +KEYM+LTY Sbjct 188 SDTVVSYEIILADGQVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTY 247 Query 241 IPVKGDLQALAQGYIDSFAPKDGDKS---KIPDFVEGMVYNPTEGVMMVGTYASKEEAKK 297 PV G+LQ +AQ YIDSFAP+DGD+ K+PDFVE MVYNPTE V M G YASKEEAK+ Sbjct 248 KPVVGNLQEIAQAYIDSFAPRDGDQDNPDKVPDFVETMVYNPTEAVCMTGRYASKEEAKQ 307 Query 298 KGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQF 357 KGN IN+VGWWFKPWFYQHAQTALK+G+FVEYIPTREYYHRHTRCLYWEGKLILPFGDQ+ Sbjct 308 KGNVINSVGWWFKPWFYQHAQTALKRGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQW 367 Query 358 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYP 417 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQD+LVPLYKVGDALEWVHREMEVYP Sbjct 368 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDLLVPLYKVGDALEWVHREMEVYP 427 Query 418 IWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSE 477 IWLCPH+L++ P+K +YPEPGFE RQGD+ AQMYTDVGVYYAPG VLRGE +DG+E Sbjct 428 IWLCPHRLYRLPLKTMVYPEPGFELHRRQGDSPYAQMYTDVGVYYAPGPVLRGEVYDGAE 487 Query 478 AVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKSKK 537 AVR++E WLIENHGFQPQYAVSEL EK+FWRMF+G LYE CRKKYRAIGTFMSVYYKSKK Sbjct 488 AVRQLENWLIENHGFQPQYAVSELTEKNFWRMFDGGLYEHCRKKYRAIGTFMSVYYKSKK 547 Query 538 GRKTEKEVREAEQAHLETAYAEAD 561 G+KTEKEV++AEQ E E D Sbjct 548 GKKTEKEVQDAEQETAELETPEVD 571 >Nitab4.5_0008761g0020.1 FAD linked oxidase, N-terminal, CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2, FAD-binding, type 2 Length=575 Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/548 (79%), Positives = 487/548 (89%), Gaps = 4/548 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSD + PL PKRKK VD+ ++FRWIIVI VLPFS FYF IYLGD+ SE KS+E+RQ Sbjct 7 MSDAKAPL-HPKRKKQVVDFLLQFRWIIVIVFVLPFSFLFYFSIYLGDVKSERKSYEQRQ 65 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHDENVK+V+KRL RDASKDGLVCT R PW+ VGMRNVDYKRARHFEVDL +FRNILE Sbjct 66 KEHDENVKEVVKRLGERDASKDGLVCTGRPPWVVVGMRNVDYKRARHFEVDLSKFRNILE 125 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVP+NLSLAV+AELDDLTVGGLING+GIEGSSHI+GLF Sbjct 126 IDKERMIARVEPLVNMGQISRVTVPINLSLAVLAELDDLTVGGLINGFGIEGSSHIFGLF 185 Query 181 ADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLTY 240 +DTV A EIVLA G +VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI+VKEY+RLTY Sbjct 186 SDTVVALEIVLADGRVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIQVKEYVRLTY 245 Query 241 IPVKGDLQALAQGYIDSFAPKDGDK---SKIPDFVEGMVYNPTEGVMMVGTYASKEEAKK 297 PV G+L+ LAQ Y DSFAP+DGD+ SK+P+ VEGM+Y+PTEGVMM G YASK+EAK+ Sbjct 246 KPVTGNLKELAQAYADSFAPRDGDQDNPSKVPEMVEGMIYSPTEGVMMTGRYASKQEAKQ 305 Query 298 KGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQF 357 KGN INN GWWFKPWFYQHAQTALK+G+FVEYIPTR+YYHRHTR LYWEGKLILPFGDQF Sbjct 306 KGNVINNYGWWFKPWFYQHAQTALKRGEFVEYIPTRDYYHRHTRSLYWEGKLILPFGDQF 365 Query 358 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYP 417 WFR+LLGWLMPPK++LLKATQ EAIRNYYHD HVIQD+LVPLYKVGD LEWVHREMEVYP Sbjct 366 WFRFLLGWLMPPKIALLKATQSEAIRNYYHDHHVIQDLLVPLYKVGDCLEWVHREMEVYP 425 Query 418 IWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSE 477 IWLCPH+++K P+K IYPEPGFE RQGDTE AQMYTD+GVYY PG VLRGE FDG+E Sbjct 426 IWLCPHRIYKLPVKPMIYPEPGFEAHRRQGDTEYAQMYTDIGVYYVPGAVLRGEPFDGAE 485 Query 478 AVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKSKK 537 R++E WLIENHGFQ QYAV+EL EK+FWRMF+ LYE+CRKKY+AIGTFMS YYKSKK Sbjct 486 KCRQLELWLIENHGFQAQYAVTELTEKNFWRMFDNSLYEQCRKKYKAIGTFMSAYYKSKK 545 Query 538 GRKTEKEV 545 GRKTEKEV Sbjct 546 GRKTEKEV 553 >Nitab4.5_0001219g0170.1 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2, FAD-binding, type 2, FAD linked oxidase, N-terminal Length=577 Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/564 (77%), Positives = 495/564 (88%), Gaps = 4/564 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSD + PL RPKRK VD+ ++FRWI+VIF VLPFS +YF IYLGD+ SE KS+E+RQ Sbjct 14 MSDAKAPL-RPKRKMQLVDFLIQFRWILVIFFVLPFSFLYYFSIYLGDVKSERKSYEQRQ 72 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHDENVK+V+KRL RDASKDGLVCT R PW+ VGMRNVDYKRARHFEVDL +FRNILE Sbjct 73 KEHDENVKEVVKRLGERDASKDGLVCTGRPPWVVVGMRNVDYKRARHFEVDLSKFRNILE 132 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVPMNLSLAV+AELDDLTVGGLING+GIEGSSHI+GLF Sbjct 133 IDKERMIARVEPLVNMGQISRVTVPMNLSLAVLAELDDLTVGGLINGFGIEGSSHIFGLF 192 Query 181 ADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLTY 240 +DTV + E+VLA G +VRAT+DNEYSDL+YAIPWSQGTLGLLV+AEI+LI VKEY+RLTY Sbjct 193 SDTVVSLEVVLADGRVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPVKEYVRLTY 252 Query 241 IPVKGDLQALAQGYIDSFAPKDGDK---SKIPDFVEGMVYNPTEGVMMVGTYASKEEAKK 297 PV G+L+ LAQ Y D+FAP+DGD+ SK+P+ VEGM+Y+PTEGVMM G YASK+EAK+ Sbjct 253 KPVTGNLKELAQAYADTFAPRDGDQDNPSKVPEMVEGMIYSPTEGVMMTGRYASKQEAKQ 312 Query 298 KGNKINNVGWWFKPWFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQF 357 +GN INN GWWFKPWFYQHAQTALK+G+FVEYIPTR+YYHRHTR LYWEGKLILPFGDQF Sbjct 313 RGNVINNYGWWFKPWFYQHAQTALKRGEFVEYIPTRDYYHRHTRSLYWEGKLILPFGDQF 372 Query 358 WFRYLLGWLMPPKVSLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYP 417 WFR+LLGWLMPPK++LLKATQ EAIRNYYHD HVIQD+LVPLYKVGD LEWVHREMEVYP Sbjct 373 WFRFLLGWLMPPKIALLKATQSEAIRNYYHDHHVIQDLLVPLYKVGDCLEWVHREMEVYP 432 Query 418 IWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSE 477 IWLCPH+++K P+K IYPEPGFE RQGDTE AQMYTD+GVYY PG VLRGE FDG+E Sbjct 433 IWLCPHRIYKLPVKPMIYPEPGFEAHRRQGDTEYAQMYTDIGVYYVPGAVLRGEPFDGAE 492 Query 478 AVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIGTFMSVYYKSKK 537 R++E WLIENHGFQ QYAV+EL EK+FWRMF+ LYE+CRKKY+AIGTFMS YYKSKK Sbjct 493 KCRQLELWLIENHGFQAQYAVTELTEKNFWRMFDNTLYEQCRKKYKAIGTFMSAYYKSKK 552 Query 538 GRKTEKEVREAEQAHLETAYAEAD 561 GRKTEKEV+EAEQ E E D Sbjct 553 GRKTEKEVQEAEQEKAEQETPEVD 576 >Nitab4.5_0012697g0010.1 FAD linked oxidase, N-terminal, CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2, FAD-binding, type 2 Length=353 Score = 328 bits (841), Expect = 4e-108, Method: Compositional matrix adjust. Identities = 158/196 (81%), Positives = 177/196 (90%), Gaps = 1/196 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSDL+ PL RPKRKK VDY V+FRWIIVIF VLP S +YF IYLGD+ S+ KSF+KRQ Sbjct 9 MSDLEVPL-RPKRKKNLVDYLVQFRWIIVIFFVLPLSFLYYFSIYLGDVRSDCKSFKKRQ 67 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHD+NVKKV+KRLK R+ASKDGLVCTARKPW+AVGMRNVDYKRARHFEVDL FRN+L+ Sbjct 68 KEHDDNVKKVVKRLKERNASKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLD 127 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF Sbjct 128 IDKERMVARVEPLVNMGQISRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 187 Query 181 ADTVEAYEIVLAGGEL 196 +DTV +YEI+LA G++ Sbjct 188 SDTVVSYEIILADGQV 203 Score = 222 bits (566), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 112/155 (72%), Positives = 129/155 (83%), Gaps = 0/155 (0%) Query 407 EWVHREMEVYPIWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGC 466 E + + +VYPIWLCPH+L++ P+K +YPEPGFE RQGDT AQMYTDVGVYYAPG Sbjct 195 EIILADGQVYPIWLCPHRLYRLPLKTMVYPEPGFELHRRQGDTPYAQMYTDVGVYYAPGP 254 Query 467 VLRGEEFDGSEAVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIG 526 VLRGE +DG+EAVR++E WLIENHGFQPQYAVSEL EK+FWRMF+G LYE CRKKYRAIG Sbjct 255 VLRGEVYDGAEAVRQLENWLIENHGFQPQYAVSELTEKNFWRMFDGSLYEHCRKKYRAIG 314 Query 527 TFMSVYYKSKKGRKTEKEVREAEQAHLETAYAEAD 561 TFMSVYYKSKKG+KTEKEV++AEQ E E D Sbjct 315 TFMSVYYKSKKGKKTEKEVQDAEQETAELETPEVD 349 >Nitab4.5_0000876g0110.1 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2, FAD-binding, type 2, FAD linked oxidase, N-terminal Length=345 Score = 326 bits (835), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 157/196 (80%), Positives = 176/196 (90%), Gaps = 1/196 (1%) Query 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQ 60 MSDL+ PL RPKRKK VDY V+FRWIIVIF VLP S +YF IYLGD+ S+ KSF+KRQ Sbjct 1 MSDLEVPL-RPKRKKNLVDYLVQFRWIIVIFFVLPLSFLYYFSIYLGDVRSDCKSFKKRQ 59 Query 61 KEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILE 120 KEHD+NVKKV+KRLK R+ASKDGLVC ARKPW+AVGMRNVDYKRARHFEVDL FRN+L+ Sbjct 60 KEHDDNVKKVVKRLKERNASKDGLVCIARKPWVAVGMRNVDYKRARHFEVDLSPFRNVLD 119 Query 121 INKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 180 I+KE+M ARVEPLVNMGQISR TVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF Sbjct 120 IDKERMVARVEPLVNMGQISRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF 179 Query 181 ADTVEAYEIVLAGGEL 196 +DTV +YEI+LA G++ Sbjct 180 SDTVVSYEIILADGQV 195 Score = 218 bits (555), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 111/155 (72%), Positives = 128/155 (83%), Gaps = 0/155 (0%) Query 407 EWVHREMEVYPIWLCPHKLFKQPIKGQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGC 466 E + + +VYPIWLCPH+L++ P+K +YPEPGFE RQGDT AQMYTDVGVYYA G Sbjct 187 EIILADGQVYPIWLCPHRLYRLPLKTMVYPEPGFELHRRQGDTPYAQMYTDVGVYYALGP 246 Query 467 VLRGEEFDGSEAVRRMEKWLIENHGFQPQYAVSELDEKSFWRMFNGELYEECRKKYRAIG 526 VLRGE +DG+EAVR++E WLIENHGFQPQYAVSEL EK+FWRMF+G LYE CRKKYRAIG Sbjct 247 VLRGEVYDGAEAVRQLENWLIENHGFQPQYAVSELTEKNFWRMFDGSLYEHCRKKYRAIG 306 Query 527 TFMSVYYKSKKGRKTEKEVREAEQAHLETAYAEAD 561 TFMSVYYKSKKG+KTEKEV++AEQ E E D Sbjct 307 TFMSVYYKSKKGKKTEKEVQDAEQETAELETPEVD 341 Lambda K H a alpha 0.321 0.138 0.430 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 7609834484 Database: Nitab v4.5 proteins Edwards2017 Posted date: Mar 21, 2024 4:13 PM Number of letters in database: 24,411,417 Number of sequences in database: 69,500 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40