BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=654 Score E Sequences producing significant alignments: (Bits) Value Solyc00g021630.1.1 1208 0.0 Solyc11g030930.3.1 289 2e-77 Solyc10g045730.1.1 196 1e-49 >Solyc00g021630.1.1 Length=654 Score = 1208 bits (654), Expect = 0.0 Identities = 654/654 (100%), Gaps = 0/654 (0%) Strand=Plus/Plus Query 1 ATGATACTTTCCGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGATACTTTCCGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCT 60 Query 61 AAAAATCCGGTACATTCCGTTTTGTTTCTCATCCCAGTCTTTCGCAACACTTCAGGTTTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAAAATCCGGTACATTCCGTTTTGTTTCTCATCCCAGTCTTTCGCAACACTTCAGGTTTA 120 Query 121 CTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTTATATAGGAGCT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTTATATAGGAGCT 180 Query 181 ATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCAC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCAC 240 Query 241 GAAGAAGTATTGCGCTATTTACCAGTGAGTGGTATTATTGGACTTATCTTTTGGTGGGAG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GAAGAAGTATTGCGCTATTTACCAGTGAGTGGTATTATTGGACTTATCTTTTGGTGGGAG 300 Query 301 ATGTTCTTTATTTTAGATAATGAAAGCATTCCATTACTACCAACCCAAAGAAATACGACC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ATGTTCTTTATTTTAGATAATGAAAGCATTCCATTACTACCAACCCAAAGAAATACGACC 360 Query 361 TCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TCTCTGAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTG 420 Query 421 GGCAATTTACTTTATACCTACTATTTCGTCTGGTTTTTGGTTTCTAGTCTTATTTTATTA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GGCAATTTACTTTATACCTACTATTTCGTCTGGTTTTTGGTTTCTAGTCTTATTTTATTA 480 Query 481 GTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GTAGCCATGATTGGGGCTATAGTACTGACTATGCATAGGACTACTAAGGTGAAAAGACAG 540 Query 541 GATGTATTTCGACGAAATGCTCTGGATTCTAGGAGGACTATAATGAGGAGGACGACAGAC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GATGTATTTCGACGAAATGCTCTGGATTCTAGGAGGACTATAATGAGGAGGACGACAGAC 600 Query 601 CCGCTCACGACAATAAGGAGAAGCAGTGGTTCGAATCCACATCGTGAGCTTTAG 654 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 CCGCTCACGACAATAAGGAGAAGCAGTGGTTCGAATCCACATCGTGAGCTTTAG 654 >Solyc11g030930.3.1 Length=276 Score = 289 bits (156), Expect = 2e-77 Identities = 174/183 (95%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 115 GGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTTATATA 174 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 91 GGTTTACTTCTTTTGTTAGGTCTCGACTTCTTTGCTATGATCTTTCCAGTAGTTTATATA 150 Query 175 GGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAG 234 ||||||||| || |||||||||||||||||||||| |||||| ||||||||||||| ||| Sbjct 151 GGAGCTATATCCATTTCATTCCTATTCGTTGTTATTATGTTCAATATTCAAATAGCAGAG 210 Query 235 ATTCACGAAGAAGTATTGCGCTATTTACCAGTGAGTGGTATTATTGGACTTATCTTTTGG 294 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct 211 ATTCACGAAGAAGTATTGCACTATTTACCAGTGAGTGGTATTATTGGACTTATGTTTTGG 270 Query 295 TGG 297 ||| Sbjct 271 TGG 273 >Solyc10g045730.1.1 Length=375 Score = 196 bits (106), Expect = 1e-49 Identities = 148/169 (88%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 1 ATGATACTTTCCGTTTTGTCGAGCCCTGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCT 60 ||||||||||||||||| | || |||| ||||||||| | |||| || ||||||| |||| Sbjct 55 ATGATACTTTCCGTTTTCTGGATCCCTACTTTGGTCTTTTGTTTAATTGTTGTACATGCT 114 Query 61 AAAAATCCGGTACATTCCGTTTTGTTTCTCATCCCAGTCTTTCGCAACACTTCAGGTTTA 120 |||||| | ||||||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct 115 AAAAATACTACACATTCCATTTTGTTTCTCATCCCGGTCTTCTGCAACACTTCAGGTTTA 174 Query 121 CTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTT 169 |||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 175 ATTCTTTTGCTATGTCTCGACTTCTTCGCTTTGATCTTCCCAGTAGTTT 223 Score = 104 bits (56), Expect = 7e-22 Identities = 73/81 (90%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 327 CATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGCCGG 386 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 297 CATTATATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGGTTTATGATAG 356 Query 387 AAAGGTACGAAGTTGGACTAA 407 ||||||| ||||| || |||| Sbjct 357 AAAGGTA-GAAGT-GGCCTAA 375 Score = 99.0 bits (53), Expect = 3e-20 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 187 GTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAA 246 |||||||||||||||| ||||||||||||||||||||||||||| | |||||| ||||| Sbjct 220 GTTTCATTCCTATTCGGTGTTATGATGTTCCATATTCAAATAGCAAATATTCACAAAGAA 279 Query 247 GTATTGCGCTATTTACC 263 ||| ||| ||| ||||| Sbjct 280 GTACTGCACTACTTACC 296 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21530757150 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5