BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=744 Score E Sequences producing significant alignments: (Bits) Value Solyc07g018010.3.1 798 0.0 Solyc05g014590.3.1 294 5e-79 >Solyc07g018010.3.1 Length=762 Score = 798 bits (432), Expect = 0.0 Identities = 655/762 (86%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 ||||| ||||| |||| || || || ||||||||||||||| | ||||| |||| ||| Sbjct 1 ATGGACAACATTGGTGATGAATATAAAAATTATTGGGAAACAACTATGTTTTTACAATCA 60 Query 61 GAAGAATTCGATAGCTGCTTCGATGAGGCAATCTCGTCATACTATGACTCAAGCTCGCCG 120 ||||| ||||||||| ||||||||| |||| || || || ||||| ||||| || ||| Sbjct 61 GAAGAGCTCGATAGCTATTTCGATGAGCCAATTTCATCGTATTATGATTCAAGTTCACCG 120 Query 121 GATGGG-C-C-A-CA--G-T--CATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAG 171 |||||| | | | || | | |||||||||||||||| ||||| ||||| ||||||||| Sbjct 121 GATGGGTCACAATCATCGATGGCATCGAAGAACATTGTATCAGAGAGGAATAGGAGGAAG 180 Query 172 AAGCTCAATGAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGAT 231 || | ||||| ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AAATTGAATGAAAGGTTATTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGAT 240 Query 232 AAAGCCTCAATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGG 291 ||||| ||||||||||||||||||||||| |||||| |||| || || | |||||||| Sbjct 241 AAAGCTTCAATAATCAAAGATGCAATTGATTATATTGAAGAATTACATAATCAAGAGAGA 300 Query 292 AGAATTCGAGCAGAGATATCAGTGCTTGAATCTGGAAGATCA------AAGAAG--CA-T 342 |||||||||| ||| || |||| ||||||||||||||||||| |||||| | | Sbjct 301 AGAATTCGAGGAGAAATTTCAGAGCTTGAATCTGGAAGATCATCGTCAAAGAAGAATAGT 360 Query 343 AACGATGTTGAATTTGATCAAGATGGGAGCTTTGATTTAAAGCCAAAAAGATCAAAAAAA 402 ||||||||||||||||| ||||||| || || |||| |||||| |||||||| | || | Sbjct 361 AACGATGTTGAATTTGAACAAGATGAAAGTTTCGATTCAAAGCCTAAAAGATCGAGAAGA 420 Query 403 CTTGAGCAGCAGTATGGATATGATTCTTCAGGATCAACTACAAGATCATCACCATCCTCT 462 ||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||| ||| Sbjct 421 TTTGAGATGCAATATGGATATGATTCTTCAGGATCAACTACTAGATCACCACCATCTTCT 480 Query 463 TCCCCTGTTGATGTGCTTGAGTTGAGGGTATCTTCAATGGGAGAAAAAACAATGGTGGTG 522 |||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||||| Sbjct 481 TCCCCTGTTGATGTTCTTGAGTTGAGGGTATCTTCAATGGGAGAAAAGACAGTTGTGGTG 540 Query 523 AGCCTCACATGCAGCAAAAGAAGAGACACAATGATAAAAGTTTGTGAGGTTTTTGAATCT 582 || || || ||||||||||||| |||||||||| | ||||||||||| || ||||||||| Sbjct 541 AGTCTTACTTGCAGCAAAAGAACAGACACAATGGTTAAAGTTTGTGAAGTGTTTGAATCT 600 Query 583 TTGAATGTCAAAATAATTAGTGCAAATATCACTGCTTTCTCTGGGAGACTTCTCAAGACA 642 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 601 TTGAATATCAAAATAATTAGTGCAAATATCACTGCTTTCTCTGGGAGGCTTCTCAAGACA 660 Query 643 GCTTTCATCGAGGCTGATGAAGAAGAGAGTGATATTTTGAAGTTGAGGATTCAAAGTGCT 702 |||||||| |||||||||||||||||||| ||| ||||||||||||||||| ||| ||| Sbjct 661 GCTTTCATTGAGGCTGATGAAGAAGAGAGGGATCTTTTGAAGTTGAGGATTGAAACAGCT 720 Query 703 ATAGCTTCTCTAAATGATCCACATAGCCCTATGAGCTCTTAG 744 |||||||||||||| ||||| ||||||| ||||| |||||| Sbjct 721 ATAGCTTCTCTAAACGATCCCGATAGCCCGATGAGTTCTTAG 762 >Solyc05g014590.3.1 Length=696 Score = 294 bits (159), Expect = 5e-79 Identities = 243/285 (85%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 460 TCTTCCCCTGTTGATGTGCTTGAGTTGAGGGTATCTTCAATGGGAGAAAAAACAATGGTG 519 ||||||||| ||||||| ||| |||||||||||||||| ||| |||| | | | ||||| Sbjct 412 TCTTCCCCTATTGATGTTCTTCAGTTGAGGGTATCTTCGATGAGAGATAGGATAGTGGTG 471 Query 520 GTGAGCCTCACATGCAGCAAAAGAAGAGACACAATGATAAAAGTTTGTGAGGTTTTTGAA 579 |||| |||||| |||| |||||||| ||| |||||||||||| ||||||| || || ||| Sbjct 472 GTGAACCTCACTTGCATCAAAAGAAAAGATACAATGATAAAACTTTGTGATGTATTCGAA 531 Query 580 TCTTTGAATGTCAAAATAATTAGTGCAAATATCACTGCTTTCTCTGGGAGACTTCTCAAG 639 ||||||||| |||||||||||| | ||||||| | ||||| |||| || ||||||||| Sbjct 532 TCTTTGAATATCAAAATAATTACTACAAATATTATTGCTTATTCTGAGACACTTCTCAAC 591 Query 640 ACAGCTTTCATCGAGGCTGATGAAGAAGAGAGTGATATTTTGAAGTTGAGGATTCAAAGT 699 ||| ||| ||| |||||||||| |||||||| || |||||| |||||||||||||||| Sbjct 592 ACAACTTACATTGAGGCTGATGTGGAAGAGAGCAATCTTTTGATGTTGAGGATTCAAAGT 651 Query 700 GCTATAGCTTCTCTAAATGATCCACATAGCCCTATGAGCTCTTAG 744 |||||||||||||||||| || || |||||||| ||||||||||| Sbjct 652 GCTATAGCTTCTCTAAATAATTCAGATAGCCCTCTGAGCTCTTAG 696 Score = 252 bits (136), Expect = 3e-66 Identities = 278/346 (80%), Gaps = 12/346 (3%) Strand=Plus/Plus Query 1 ATGGAAAACATCAGTGAAGACTACAACAATTATTGGGAAACAGCCATGTTCTTACCATCG 60 ||||||||||| |||||| | |||||||||| ||||||| |||| || | | || Sbjct 1 ATGGAAAACATGGTTGAAGAGAATAACAATTATTTGGAAACAACCAT--TC-T-CTTTC- 55 Query 61 GAAGAATTCGATAGCTGCTTCGATGAGGCA---ATCTCGTCATACTATGACTCAAGCTCG 117 || || ||||||| ||| || ||| || || |||||||||||||| |||| |||| Sbjct 56 -AACAA---GATAGCTACTTGGACGAGCCAATTATGTCGTCATACTATGATTCAACCTCG 111 Query 118 CCGGATGGGCCACAGTCATCGAAGAACATTGTGTCAGAAAGGAACAGGAGGAAGAAGCTC 177 || || ||| |||| ||||||||||||||||| |||||||||| |||||||| || ||| Sbjct 112 CCAGAAGGGTCACAATCATCGAAGAACATTGTATCAGAAAGGATTAGGAGGAACAAACTC 171 Query 178 AATGAGAGGCTCTTTGCACTTAGAGCTGTGGTCCCAAACATAAGCAAGATGGATAAAGCC 237 || |||| | | ||||||||||||||| | || ||||| |||| |||||||||||||||| Sbjct 172 AAAGAGAAGTTATTTGCACTTAGAGCTCTTGTTCCAAAAATAACCAAGATGGATAAAGCC 231 Query 238 TCAATAATCAAAGATGCAATTGAGTATATTCAAGATTTGCACGAGCAAGAGAGGAGAATT 297 |||||| | |||||||||||||| |||||| | | |||| ||||||| ||||||||| Sbjct 232 TCAATAGTGAAAGATGCAATTGAATATATTGTAAAACTGCAGAAGCAAGATAGGAGAATT 291 Query 298 CGAGCAGAGATATCAGTGCTTGAATCTGGAAGATCAAAGAAGCATA 343 |||| |||||||||| ||||||||| | || ||||| ||| ||| Sbjct 292 CGAGGAGAGATATCAAAGCTTGAATCCGAAACCTCAAACAAGAATA 337 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24547903870 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5