BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: N.benthamiana Genome v1.0.1 predicted cDNA 57,140 sequences; 82,582,885 total letters Query= Untitled_sequence Length=3129 Score E Sequences producing significant alignments: (Bits) Value Niben101Scf10067g02023.1sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog... 5779 0.0 Niben101Scf08973g00018.1sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog... 5221 0.0 Niben101Scf08041g03001.1sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog... 614 3e-174 Niben101Scf08041g00013.1sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog... 540 6e-152 Niben101Scf05278g01011.1sp|Q9ZW06|PUM2_ARATH *-*- Pumilio homolog... 529 1e-148 Niben101Scf07880g03027.1sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog... 351 3e-95 Niben101Scf00734g00001.1sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog... 213 1e-53 Niben101Scf05917g00010.1Unknown protein 213 1e-53 Niben101Scf06407g00011.1sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog... 196 1e-48 Niben101Scf00863g17026.1sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog... 182 4e-44 Niben101Scf01519g03013.1sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog... 115 4e-24 >Niben101Scf10067g02023.1 sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog 1 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3861 Score = 5779 bits (3129), Expect = 0.0 Identities = 3129/3129 (100%), Gaps = 0/3129 (0%) Strand=Plus/Plus Query 1 ATGATTACTGATAGCTATGCGAAAATGATGTCGGAAATCGGAATGCGATCAATGTTAGGA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 376 ATGATTACTGATAGCTATGCGAAAATGATGTCGGAAATCGGAATGCGATCAATGTTAGGA 435 Query 61 GGAAGCAACGATTTTAGTAGCAACGATTTTAGCGAAGAGTTAGGGTTTTTGCTGAGAGAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 436 GGAAGCAACGATTTTAGTAGCAACGATTTTAGCGAAGAGTTAGGGTTTTTGCTGAGAGAA 495 Query 121 CAAAGGCGGCAGCAACAAGAGGTGAGTGATCAAGAGAGAGAACTCAGCATTTTCCGTAGC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 CAAAGGCGGCAGCAACAAGAGGTGAGTGATCAAGAGAGAGAACTCAGCATTTTCCGTAGC 555 Query 181 GGTTCAGCTCCGCCGACTGTCGAAGGATCGCTTAACGCTTTGATAGGCGGCGGAAGTGGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 556 GGTTCAGCTCCGCCGACTGTCGAAGGATCGCTTAACGCTTTGATAGGCGGCGGAAGTGGC 615 Query 241 GGCGGGAATGGTAGTGATATTAGTGGACTTTCAGAAGAGGAGTTAAGGTCTGATCCAGCG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 616 GGCGGGAATGGTAGTGATATTAGTGGACTTTCAGAAGAGGAGTTAAGGTCTGATCCAGCG 675 Query 301 TACATTTCGTATTATTACTCGAATGTGAATCTAAACCCTAGGCTTCCGCCACCTCTTTTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 676 TACATTTCGTATTATTACTCGAATGTGAATCTAAACCCTAGGCTTCCGCCACCTCTTTTG 735 Query 361 TCTAAAGAGGACTGGAGGTTCACACAGCGTCTACAGGGTGGCGGTGGAGGTGGTAGTGGT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 736 TCTAAAGAGGACTGGAGGTTCACACAGCGTCTACAGGGTGGCGGTGGAGGTGGTAGTGGT 795 Query 421 GGTAGTTCACCGGCATTAGGAGGGATTGGAGATAGGAGGAAAGGAAATCGTGCCGGTTGT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 796 GGTAGTTCACCGGCATTAGGAGGGATTGGAGATAGGAGGAAAGGAAATCGTGCCGGTTGT 855 Query 481 GATGTTGAGTCGCTTTTTTCAAAGCCGATAGGATTTGGTGGGAAAAATGAAGAAAATGGA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 856 GATGTTGAGTCGCTTTTTTCAAAGCCGATAGGATTTGGTGGGAAAAATGAAGAAAATGGA 915 Query 541 AGTGAGGCGGGGAAAGAGTGGGGCGGGGATGGACTTATTGGATTACCTGGATTAGGCGTA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 916 AGTGAGGCGGGGAAAGAGTGGGGCGGGGATGGACTTATTGGATTACCTGGATTAGGCGTA 975 Query 601 GGAAGCCGACAGAAGAGCATTGCTGAGATGATTCAGGACAATATGAGCCAGACAACATCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 976 GGAAGCCGACAGAAGAGCATTGCTGAGATGATTCAGGACAATATGAGCCAGACAACATCT 1035 Query 661 ACTCCGAGGCATCCGTCACGTCCCGCTTCCCGTGCATATGATGATATTGTTGATCCTTCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1036 ACTCCGAGGCATCCGTCACGTCCCGCTTCCCGTGCATATGATGATATTGTTGATCCTTCT 1095 Query 721 GAGTCCCAATTTGCTCATCTCCATCATGAGATGGCAAATTTGGACGCACTACATTCTCGG 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1096 GAGTCCCAATTTGCTCATCTCCATCATGAGATGGCAAATTTGGACGCACTACATTCTCGG 1155 Query 781 GGAAAGGTTCAAGGCATGTCTACCCTTCAAAATGTCAACTCATCAGTCTCTCAGTCTTAT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1156 GGAAAGGTTCAAGGCATGTCTACCCTTCAAAATGTCAACTCATCAGTCTCTCAGTCTTAT 1215 Query 841 GCTTCAGCCGTGGGTGGATCACTGTCACGAAGTACCACCCCTGACCCTCAGCTTGTGGCT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1216 GCTTCAGCCGTGGGTGGATCACTGTCACGAAGTACCACCCCTGACCCTCAGCTTGTGGCT 1275 Query 901 AGAGCTCTTAGTCCTCGTATTCCTTCTGCTGGAGGAGGGAGGATAGCATCACTAGAGAAT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1276 AGAGCTCTTAGTCCTCGTATTCCTTCTGCTGGAGGAGGGAGGATAGCATCACTAGAGAAT 1335 Query 961 GTTTCATCTCATATGGGTGAGCATGCTGATTTGGCTGCTGCATTGTCTGGCATGAGTCTA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1336 GTTTCATCTCATATGGGTGAGCATGCTGATTTGGCTGCTGCATTGTCTGGCATGAGTCTA 1395 Query 1021 TCCGGGAACAATAGGGGAGATGAAGGGAAACATCCAAAGTCTCAGATTCATAATGAGATG 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1396 TCCGGGAACAATAGGGGAGATGAAGGGAAACATCCAAAGTCTCAGATTCATAATGAGATG 1455 Query 1081 GATGATCATCAGAACCTCTTCCGATTGCAGAATGGTCAGAATCCTATGAAGCAACATCCA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1456 GATGATCATCAGAACCTCTTCCGATTGCAGAATGGTCAGAATCCTATGAAGCAACATCCA 1515 Query 1141 AATGCAAAAAAGTCTGAATCTGTTCAGTTTCACAAGTCTGCAGGATCCTCTGCTGCATAC 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1516 AATGCAAAAAAGTCTGAATCTGTTCAGTTTCACAAGTCTGCAGGATCCTCTGCTGCATAC 1575 Query 1201 TTGAATGGGCCCTCTACGCCAACTCGCAACTGTGCAAGAGGTTCTCCATCTCAATTTCCA 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1576 TTGAATGGGCCCTCTACGCCAACTCGCAACTGTGCAAGAGGTTCTCCATCTCAATTTCCA 1635 Query 1261 ACTATTGATAGTCCTAACTCAACGTTTTCTGCCTATGCTTTAGGGGCTTATGGTATAAAC 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1636 ACTATTGATAGTCCTAACTCAACGTTTTCTGCCTATGCTTTAGGGGCTTATGGTATAAAC 1695 Query 1321 CCTTCATCACCATCCATGTTGGAAAACCAGCTTGGGGCAGGTAATATTCCTTCCGTAGTG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696 CCTTCATCACCATCCATGTTGGAAAACCAGCTTGGGGCAGGTAATATTCCTTCCGTAGTG 1755 Query 1381 GGAAATATAGCGTCCCCGGTGGTTGCATGTGGAATTGATGCTCGAGCAACAGGAGGAAGT 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1756 GGAAATATAGCGTCCCCGGTGGTTGCATGTGGAATTGATGCTCGAGCAACAGGAGGAAGT 1815 Query 1441 TTGAGCTTGGGTCCTAATTTATTGGCTGCAGCAGCTGAACTGCAGAACCTTAGACTTGGT 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1816 TTGAGCTTGGGTCCTAATTTATTGGCTGCAGCAGCTGAACTGCAGAACCTTAGACTTGGT 1875 Query 1501 AATCAGACCTTGGGAGGTTCTCTGCAAATGTCTCAGATGGATCCATTGTACCTGCAGTAC 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1876 AATCAGACCTTGGGAGGTTCTCTGCAAATGTCTCAGATGGATCCATTGTACCTGCAGTAC 1935 Query 1561 TTGAGATCAACTGAGTATCATGCTGCTCAGCTAGCAGCTCTGAATGACCCAACAGTTAAC 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1936 TTGAGATCAACTGAGTATCATGCTGCTCAGCTAGCAGCTCTGAATGACCCAACAGTTAAC 1995 Query 1621 AGGGAATCTTTGGGGACTTCATACATGGATTTAATTGAGCTTCAGAAAGCTTATCTGGAG 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1996 AGGGAATCTTTGGGGACTTCATACATGGATTTAATTGAGCTTCAGAAAGCTTATCTGGAG 2055 Query 1681 ACGTTGCTTGCATCTCAGAATTCCCAATATGGTCTTCCTTATCTTGGAAAATCTGGTGGC 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2056 ACGTTGCTTGCATCTCAGAATTCCCAATATGGTCTTCCTTATCTTGGAAAATCTGGTGGC 2115 Query 1741 TTAAATCATGGTTACTATGGGAACGCAGCAAATGGCCTTAATATGTCATATCCAGGAAGC 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2116 TTAAATCATGGTTACTATGGGAACGCAGCAAATGGCCTTAATATGTCATATCCAGGAAGC 2175 Query 1801 CCTTTGGCAGGTGCAGTTCTTCCAAATTCCCCTTTTGGACCTGGTAGTCCTGTAAGGTAT 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2176 CCTTTGGCAGGTGCAGTTCTTCCAAATTCCCCTTTTGGACCTGGTAGTCCTGTAAGGTAT 2235 Query 1861 GGGGAAAGGAACATGCGTTTTCCATCAGGGACGAGGAACTTAGCTGGTGGTGTCATGGGA 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2236 GGGGAAAGGAACATGCGTTTTCCATCAGGGACGAGGAACTTAGCTGGTGGTGTCATGGGA 2295 Query 1921 GCTTGGCATTCTGAGTCTGTTTCTAACTTGGGTGAAAGCTTTGCTTCCTCGTTATTGGAT 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2296 GCTTGGCATTCTGAGTCTGTTTCTAACTTGGGTGAAAGCTTTGCTTCCTCGTTATTGGAT 2355 Query 1981 GAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTATCAGAGATTGAAGGCCACGTCGTT 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2356 GAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTATCAGAGATTGAAGGCCACGTCGTT 2415 Query 2041 CAGTTCAGCGCGGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACT 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2416 CAGTTCAGCGCGGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACT 2475 Query 2101 ACAGACGAGAAAAACATGGTTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACT 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2476 ACAGACGAGAAAAACATGGTTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACT 2535 Query 2161 GATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAAGTGCATCCCAGATA 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2536 GATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAAGTGCATCCCAGATA 2595 Query 2221 AGAGAACTGGCTGACCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGT 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2596 AGAGAACTGGCTGACCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGT 2655 Query 2281 TGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTC 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2656 TGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTC 2715 Query 2341 GCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTAATC 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2716 GCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTAATC 2775 Query 2401 CAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATCCAGTTCATTGTTTCCACATTTCAT 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2776 CAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATCCAGTTCATTGTTTCCACATTTCAT 2835 Query 2461 GATCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGAGAGTCTTG 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2836 GATCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGAGAGTCTTG 2895 Query 2521 GAACATTGCCATAATCCTGACACCCAGAGCATTGTGATGAATGAGATTATGCAATCGATT 2580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2896 GAACATTGCCATAATCCTGACACCCAGAGCATTGTGATGAATGAGATTATGCAATCGATT 2955 Query 2581 TGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTGGAACATGGG 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2956 TGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTGGAACATGGG 3015 Query 2641 AAGCCAGAGGAGCGTTCGTCTATAATTAGTAAGCTGATGGGACAGATAGTTCAGATGAGC 2700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3016 AAGCCAGAGGAGCGTTCGTCTATAATTAGTAAGCTGATGGGACAGATAGTTCAGATGAGC 3075 Query 2701 CAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAGCTTCGGAACTCCCGAAGAA 2760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3076 CAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAGCTTCGGAACTCCCGAAGAA 3135 Query 2761 CGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGACGAAAATGAACCTCTTCAGGCA 2820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3136 CGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGACGAAAATGAACCTCTTCAGGCA 3195 Query 2821 ATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGACGAC 2880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3196 ATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGACGAC 3255 Query 2881 CAGCAACTTGAACTCATTCTCAACCGAATCAAGGTTCATCTAAATGCTCTGAAGAAATAT 2940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3256 CAGCAACTTGAACTCATTCTCAACCGAATCAAGGTTCATCTAAATGCTCTGAAGAAATAT 3315 Query 2941 ACTTACGGAAAGCATATAGTTGCCCGAGTAGAGAAACTGAGAGGAGGATCAGCTTCCTGG 3000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3316 ACTTACGGAAAGCATATAGTTGCCCGAGTAGAGAAACTGAGAGGAGGATCAGCTTCCTGG 3375 Query 3001 CGTCATATTCTGCTGCTTAGATGGTGTAGGAAGGAACTTGTACAGCTAACTGAGGCTAGA 3060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3376 CGTCATATTCTGCTGCTTAGATGGTGTAGGAAGGAACTTGTACAGCTAACTGAGGCTAGA 3435 Query 3061 ATGTGTGCTGTTGTCTTTGTTTTCTTTCCCAGAGCTTTGGCTCTAGCTCTTGCTGATGGA 3120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3436 ATGTGTGCTGTTGTCTTTGTTTTCTTTCCCAGAGCTTTGGCTCTAGCTCTTGCTGATGGA 3495 Query 3121 ACATGTTAA 3129 ||||||||| Sbjct 3496 ACATGTTAA 3504 >Niben101Scf08973g00018.1 sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog 1 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3830 Score = 5221 bits (2827), Expect = 0.0 Identities = 3031/3129 (97%), Gaps = 15/3129 (0%) Strand=Plus/Plus Query 1 ATGATTACTGATAGCTATGCGAAAATGATGTCGGAAATCGGAATGCGATCAATGTTAGGA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 ATGATTACTGATAGCTATGCGAAAATGATGTCGGAAATCGGAATGCGATCAATGTTAGGA 425 Query 61 GGAAGCAACGATTTTAGTAGCAACGATTTTAGCGAAGAGTTAGGGTTTTTGCTGAGAGAA 120 ||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 426 GGA---------------AGCAACGATTTTAGCGAAGAGTTAGGGTTCATGCTGAGAGAA 470 Query 121 CAAAGGCGGCAGCAACAAGAGGTGAGTGATCAAGAGAGAGAACTCAGCATTTTCCGTAGC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 CAAAGGCGGCAGCAACAAGAGGTGAGTGATCAAGAGAGAGAACTCAGCATTTTCCGTAGC 530 Query 181 GGTTCAGCTCCGCCGACTGTCGAAGGATCGCTTAACGCTTTGATAGGCGGCGGAAGTGGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 531 GGTTCAGCTCCGCCGACTGTCGAAGGATCGCTTAACGCTTTGATAGGCGGCGGAAGTGGC 590 Query 241 GGCGGGAATGGTAGTGATATTAGTGGACTTTCAGAAGAGGAGTTAAGGTCTGATCCAGCG 300 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 591 GGCGGGAATGGTAGTGATATTAGTGGTCTTTCAGAAGAGGAGTTAAGGTCTGATCCAGCG 650 Query 301 TACATTTCGTATTATTACTCGAATGTGAATCTAAACCCTAGGCTTCCGCCACCTCTTTTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 TACATTTCGTATTATTACTCGAATGTGAATCTAAACCCTAGGCTTCCGCCACCTCTTTTG 710 Query 361 TCTAAAGAGGACTGGAGGTTCACACAGCGTCTACAGGGTGGCGGTGGAGGTGGTAGTGGT 420 ||||||||||||||||||||| | ||||||||||||||||| ||||||| || ||||||| Sbjct 711 TCTAAAGAGGACTGGAGGTTCTCGCAGCGTCTACAGGGTGGAGGTGGAGATGCTAGTGGT 770 Query 421 GGTAGTTCACCGGCATTAGGAGGGATTGGAGATAGGAGGAAAGGAAATCGTGCCGGTTGT 480 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| Sbjct 771 GGTAGTTCACCGGCATTAGGAGGGATTGGAGATAGGAGGAAAGTAAACCGTGCTGGTTGT 830 Query 481 GATGTTGAGTCGCTTTTTTCAAAGCCGATAGGATTTGGTGGGAAAAATGAAGAAAATGGA 540 |||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||| Sbjct 831 GATGTTGAGTCGCTTTATTCAAAGCCGATGGGTTTTGGTGGGAAAAATGAGGAAAATGGA 890 Query 541 AGTGAGGCGGGGAAAGAGTGGGGCGGGGATGGACTTATTGGATTACCTGGATTAGGCGTA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 891 AGTGAGGCGGGGAAAGAGTGGGGCGGGGATGGACTTATTGGATTACCTGGATTAGGATTA 950 Query 601 GGAAGCCGACAGAAGAGCATTGCTGAGATGATTCAGGACAATATGAGCCAGACAACATCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 951 GGAAGCCGACAGAAGAGCATTGCTGAGATGATTCAGGACAATATGAGCCAGACAACATCT 1010 Query 661 ACTCCGAGGCATCCGTCACGTCCCGCTTCCCGTGCATATGATGATATTGTTGATCCTTCT 720 ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| Sbjct 1011 ACTTCGAGGCATCCGTCACGTCCTGCTTCCCGTGCGTATGATGATATTGTTGATCTTTCT 1070 Query 721 GAGTCCCAATTTGCTCATCTCCATCATGAGATGGCAAATTTGGACGCACTACATTCTCGG 780 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 1071 GAGTCCCAATTTGCTCATCTCCATCATGAGATGGCAACTTTGGATGCACTACATTCTCGG 1130 Query 781 GGAAAGGTTCAAGGCATGTCTACCCTTCAAAATGTCAACTCATCAGTCTCTCAGTCTTAT 840 ||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| Sbjct 1131 GGAAAGGTTCAAGGCGTGTCTGCCCTTCAAAATGTCAGCTCATCAGGCTCTCAGTCTTAT 1190 Query 841 GCTTCAGCCGTGGGTGGATCACTGTCACGAAGTACCACCCCTGACCCTCAGCTTGTGGCT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1191 GCTTCAGCCGTGGGTGGATCACTGTCACGAAGTACCACCCCTGACCCTCAGCTTGTGGCT 1250 Query 901 AGAGCTCTTAGTCCTCGTATTCCTTCTGCTGGAGGAGGGAGGATAGCATCACTAGAGAAT 960 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1251 AGAGCTCCTAGTCCTCGTATTCCTTCTGCTGGAGGAGGAAGGATAGCATCACTAGAGAAT 1310 Query 961 GTTTCATCTCATATGGGTGAGCATGCTGATTTGGCTGCTGCATTGTCTGGCATGAGTCTA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1311 GTTTCATCTCATATGGGTGAGCATGCTGATTTGGCTGCTGCATTGTCTGGCATGAGTCTA 1370 Query 1021 TCCGGGAACAATAGGGGAGATGAAGGGAAACATCCAAAGTCTCAGATTCATAATGAGATG 1080 || ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct 1371 TCGGGGAACAATAGGGGAGACGAAGGGAAACATCCGAAGTCTCAGATTCACAATGAGATG 1430 Query 1081 GATGATCATCAGAACCTCTTCCGATTGCAGAATGGTCAGAATCCTATGAAGCAACATCCA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1431 GATGATCATCAGAACCTCTTCCGATTGCAGAATGGTCAGAATCCTATGAAGCAATATCCA 1490 Query 1141 AATGCAAAAAAGTCTGAATCTGTTCAGTTTCACAAGTCTGCAGGATCCTCTGCTGCATAC 1200 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1491 TATGCAAAAAAGTCTGAATCTGTTCAGTTTCACAAGTCTGCAGGATCCTCTGCTGCATAC 1550 Query 1201 TTGAATGGGCCCTCTACGCCAACTCGCAACTGTGCAAGAGGTTCTCCATCTCAATTTCCA 1260 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1551 TTGAATGGGCCCTCTACGCCAACTCGCAACTGTGCAAGAGGTTCTCCATCTCAATATCCA 1610 Query 1261 ACTATTGATAGTCCTAACTCAACGTTTTCTGCCTATGCTTTAGGGGCTTATGGTATAAAC 1320 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 1611 ACTATTGATAGTCCTAACTCAACGTTTTCTGCCTATGCTTTAGGGGGTTATGGTATGAAC 1670 Query 1321 CCTTCATCACCATCCATGTTGGAAAACCAGCTTGGGGCAGGTAATATTCCTTCCGTAGTG 1380 ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| || Sbjct 1671 CCTTCATCACCATCCATGTTGGAAAACCAGCTTGGGGCAGGTAATTTTCCATCCGTACTG 1730 Query 1381 GGAAATATAGCGTCCCCGGTGGTTGCATGTGGAATTGATGCTCGAGCAACAGGAGGAAGT 1440 ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| Sbjct 1731 GGAAATATAGCGTCCCCAGTGGGTGCATGTGGAATTGATGCTCGAGCATCAGGAGGAAGT 1790 Query 1441 TTGAGCTTGGGTCCTAATTTATTGGCTGCAGCAGCTGAACTGCAGAACCTTAGACTTGGT 1500 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1791 TTGAGTTTGGGTCCTAATTTATTGGCTGCAGCAGCTGAACTGCAGAACCTTAGACTTGGT 1850 Query 1501 AATCAGACCTTGGGAGGTTCTCTGCAAATGTCTCAGATGGATCCATTGTACCTGCAGTAC 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1851 AATCAGACCTTGGGAGGTTCTCTGCAAATGTCTCAGATGGATCCATTGTACCTGCAGTAC 1910 Query 1561 TTGAGATCAACTGAGTATCATGCTGCTCAGCTAGCAGCTCTGAATGACCCAACAGTTAAC 1620 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1911 TTGAGATCAACTGAGTATCATGCTGCTCAGCTAGCAGCTCTCAATGACCCAACAGTTAAC 1970 Query 1621 AGGGAATCTTTGGGGACTTCATACATGGATTTAATTGAGCTTCAGAAAGCTTATCTGGAG 1680 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1971 AGGGAATCTTTGGGGACTTCATACATGGATTTGATTGAGCTTCAGAAAGCTTATCTGGAG 2030 Query 1681 ACGTTGCTTGCATCTCAGAATTCCCAATATGGTCTTCCTTATCTTGGAAAATCTGGTGGC 1740 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| Sbjct 2031 ACGTTGCTTGCATCTCAGAATTCCCAATACGGTCTTCCTTATCTTGGCAAATCTGCTGGT 2090 Query 1741 TTAAATCATGGTTACTATGGGAACGCAGCAAATGGCCTTAATATGTCATATCCAGGAAGC 1800 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2091 TTAAATCATGGTTACTATGGGAACGCAGCAAATGGCCTTAATATGTCATATCCAGGAAGT 2150 Query 1801 CCTTTGGCAGGTGCAGTTCTTCCAAATTCCCCTTTTGGACCTGGTAGTCCTGTAAGGTAT 1860 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2151 CCTTTGGCAGGTGCAGTTCTTCCAAATTCCCCTTTTGGACCTGGTAGTCCGGTAAGGTAT 2210 Query 1861 GGGGAAAGGAACATGCGTTTTCCATCAGGGACGAGGAACTTAGCTGGTGGTGTCATGGGA 1920 ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 2211 GGGGAAAGGAATATGCGTTTTCCATCAGGGATGAGAAACTTAGCTGGTGGTGTCATGGGA 2270 Query 1921 GCTTGGCATTCTGAGTCTGTTTCTAACTTGGGTGAAAGCTTTGCTTCCTCGTTATTGGAT 1980 ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2271 GCTTGGCATTCCGAGTCTGTTTCTAACATGGGTGAAAGCTTTGCTTCCTCGTTATTGGAT 2330 Query 1981 GAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTATCAGAGATTGAAGGCCACGTCGTT 2040 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 2331 GAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTATCAGAGATTGAAGGCCATGTTGTT 2390 Query 2041 CAGTTCAGCGCGGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACT 2100 |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 2391 CAGTTCAGTGCGGACCAGTATGGGAGTCGGTTCATTCAGCAAAAACTTGAGACTGCTACT 2450 Query 2101 ACAGACGAGAAAAACATGGTTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACT 2160 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2451 ACAGAAGAGAAAAACATGGTCTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACT 2510 Query 2161 GATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAAGTGCATCCCAGATA 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2511 GATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAAGTGCATCCCAGATA 2570 Query 2221 AGAGAACTGGCTGACCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGT 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2571 AGAGAACTGGCTGACCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGT 2630 Query 2281 TGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTC 2340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2631 TGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTT 2690 Query 2341 GCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTAATC 2400 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2691 GCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAGAATGGGAATCATGTAATC 2750 Query 2401 CAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATCCAGTTCATTGTTTCCACATTTCAT 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2751 CAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATCCAGTTCATTGTTTCCACATTTCAT 2810 Query 2461 GATCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGAGAGTCTTG 2520 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2811 GATCAAGTTGTGACATTGTCCACTCATCCATATGGATGTCGGGTCATACAGAGAGTCTTG 2870 Query 2521 GAACATTGCCATAATCCTGACACCCAGAGCATTGTGATGAATGAGATTATGCAATCGATT 2580 ||||||||||||||||| || |||||| | |||||||||||||||||||||||||| ||| Sbjct 2871 GAACATTGCCATAATCCCGAAACCCAGTGTATTGTGATGAATGAGATTATGCAATCAATT 2930 Query 2581 TGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTGGAACATGGG 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2931 TGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTGGAACATGGG 2990 Query 2641 AAGCCAGAGGAGCGTTCGTCTATAATTAGTAAGCTGATGGGACAGATAGTTCAGATGAGC 2700 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2991 AAACCAGAGGAGCGTTCGTCTATAATTAATAAGCTGATGGGACAGATAGTTCAGATGAGC 3050 Query 2701 CAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAGCTTCGGAACTCCCGAAGAA 2760 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 3051 CAGCAAAAATTTGCCTCCAACGTTGTGGAGAAGTGCTTAAGCTTTGGAACTCCCGAAGAA 3110 Query 2761 CGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGACGAAAATGAACCTCTTCAGGCA 2820 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3111 CGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGATGAAAATGAACCTCTTCAGGCA 3170 Query 2821 ATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGACGAC 2880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3171 ATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGACGAC 3230 Query 2881 CAGCAACTTGAACTCATTCTCAACCGAATCAAGGTTCATCTAAATGCTCTGAAGAAATAT 2940 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3231 CAGCAACTTGAACTCATTCTCAACCGAATCAAGGTTCATCTAAATGCTTTGAAGAAATAT 3290 Query 2941 ACTTACGGAAAGCATATAGTTGCCCGAGTAGAGAAACTGAGAGGAGGATCAGCTTCCTGG 3000 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 3291 ACTTACGGAAAGCACATAGTTGCCCGTGTAGAGAAGCTGAGAGGAGGATCAGCTTCCTGG 3350 Query 3001 CGTCATATTCTGCTGCTTAGATGGTGTAGGAAGGAACTTGTACAGCTAACTGAGGCTAGA 3060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3351 CGTCATATTCTGCTGCTTAGATGGTGTAGGAAGGAACTTGTACAGCTAACTGAGGCTAGA 3410 Query 3061 ATGTGTGCTGTTGTCTTTGTTTTCTTTCCCAGAGCTTTGGCTCTAGCTCTTGCTGATGGA 3120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3411 ATGTGTGCTGTTGTCTTTGTTTTCTTTCCCAGAGCTTTGGCTCTAGCTCTTGCTGATGGA 3470 Query 3121 ACATGTTAA 3129 ||||||||| Sbjct 3471 ACATGTTAA 3479 >Niben101Scf08041g03001.1 sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog 1 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3330 Score = 614 bits (332), Expect = 3e-174 Identities = 802/1031 (78%), Gaps = 23/1031 (2%) Strand=Plus/Plus Query 1957 AGCTTTGCTTCCTCGTTATTGGATGAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTA 2016 ||||| || ||||| ||| |||| ||||| || ||||| |||| | |||||||||||| Sbjct 1834 AGCTTAGCATCCTCCTTACTGGAAGAGTTCAAAAGCAACAAGACCAGGTGTTTTGAGCTT 1893 Query 2017 TCAGAGATTGAAGGCCACGTCGTTCAGTTCAGCGCGGACCAGTATGGGAGCCGGTTCATT 2076 ||||| |||| ||||||||| ||| |||| ||||| ||||||||||||||||| |||||| Sbjct 1894 TCAGAAATTGTAGGCCACGTTGTTGAGTTTAGCGCCGACCAGTATGGGAGCCGATTCATT 1953 Query 2077 CAACAAAAACTTGAGACTGCTACTACAGACGAGAAAAACATGGTTTTCCATGAAATTATG 2136 || ||||| || || ||||| || || || |||||||||||||| || || || ||| Sbjct 1954 CAGCAAAAGCTGGAAACTGCCACCACTGAGGAGAAAAACATGGTGTTTCAGGAGATTTCC 2013 Query 2137 CCGCAAGCCCTTTCTTTGATGACTGATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTC 2196 || ||||| ||| |||||||||||||||| ||||| ||||| || |||||||||||||| Sbjct 2014 CCCCAAGCTCTTACTTTGATGACTGATGTCTTTGGAAATTACGTAATCCAGAAGTTTTTT 2073 Query 2197 GAACATGGAAGTGCATCCCAGATAAGAGAACTGGCTGACCAGCTCAATGGGCATGTACTC 2256 |||||||||| ||||| |||| || ||| | |||| | ||||| ||||| || | Sbjct 2074 GAACATGGAATGGCATCTCAGAGGAGGGAATTAGCTGGCAAGCTCTTAGGGCACGTTTTA 2133 Query 2257 ACCCTTAGCCTTCAGATGTATGGTTGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAA 2316 || || |||||||| ||||||||||| || || || |||||||| ||||| || || || Sbjct 2134 ACACTGAGCCTTCAAATGTATGGTTGTCGCGTCATACAGAAGGCAATAGAAGTAGTCGAC 2193 Query 2317 CTGGATCAACAGACTAAAATGGTCGCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGA 2376 |||| || ||| |||||||| | ||||||||||| || | ||||||||||| || Sbjct 2194 GTGGACCAGAAGATCAAAATGGTTGAGGAGCTTGATGGTAATATCATGCGCTGTGTACGA 2253 Query 2377 GATCAAAATGGGAATCATGTAATCCAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATC 2436 ||||| ||||| |||||||| || ||||| ||||| ||||| | ||||| || | | | Sbjct 2254 GATCAGAATGGAAATCATGTCATTCAGAAATGTATTGAATGTGTACCAGAAGAT-C-A-C 2310 Query 2437 CAGTTCA-TT-GTT-TC-C-ACATTTCATGATCAAGTTGTGACATTGTCCACACATCCAT 2491 | |||| || || || | |||||| | |||||||| || | ||||| ||||||| Sbjct 2311 -A-TTCAATTTGTCATCTCGACATTTTTCGGACAAGTTGTTACTCTCTCCACCCATCCAT 2368 Query 2492 ATGGATGTCGGGTCATACAGAGAGTCTTGGAACATTGCCATAATCCTGACACCCAGAGCA 2551 |||| ||||| || ||||||||||| |||||||| || |||| || ||||| | | Sbjct 2369 ATGGCTGTCGAGTAATACAGAGAGTATTGGAACACTGTAGCGATCCAGAAACCCAAAATA 2428 Query 2552 TTGTGATGAATGAGATTATGCAATCGATTTGCATGTTGGCGCAAGATCAATATGGGAATT 2611 |||||| | || || || || | |||||||||| |||||||| ||||| |||| Sbjct 2429 AAGTGATGGAAGAAATCTTGGGGTCTGTAAGCATGTTGGCACAAGATCAGTATGGTAATT 2488 Query 2612 ATGTTGTTCAGCATGTACTGGAACATGGGAAGCCAGAGGAGCGTTCGTCTATAATT-AGT 2670 ||||||||||||||||| |||| || |||||||| | |||| || ||||||| || Sbjct 2489 ATGTTGTTCAGCATGTATTGGAGCACGGGAAGCCGCATGAGCACTCTATTATAATTCAGG 2548 Query 2671 AAGCTGATGGGACAGATAGTTCAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAG 2730 || | ||||| |||| || || |||||||| || || |||||||| |||||||| ||| Sbjct 2549 AATTAGCTGGGA-AGATTGTGCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTTGAG 2607 Query 2731 AAGTGCTTAAGCTTCGG-AACTCCCGAAGAACGTCAGACCT-TGGTAGACGAGATGCTTG 2788 ||||| |||| ||| | || || | ||||| ||| | | |||| | |||||||||| Sbjct 2608 AAGTGTTTAACCTTTTGTAATTCTAGT-GAACGACAG-CTTCTGGTGAATGAGATGCTTG 2665 Query 2789 GCACAACTGACGAAAATGAACCTCTTCAGGCAATGATGAAAGATCAGTTTGCCAACTACG 2848 | || ||||| |||||||| ||||||||||| |||||||||||||||||||| || |||| Sbjct 2666 GTACGACTGATGAAAATGAGCCTCTTCAGGCTATGATGAAAGATCAGTTTGCAAATTACG 2725 Query 2849 TTGTACAGAAAGTGCTGGAGACTTGTGACGACCAGCAACTTGAACTCAT--TCTCAACCG 2906 ||||||||||||| |||| |||||| ||| ||||||| ||| || || | || | | Sbjct 2726 TTGTACAGAAAGTTTTGGAAACTTGTAGCGATCAGCAACGTGAGCTGATCATGTCGAG-G 2784 Query 2907 AATCAAG-GTTCATCTAAATGCTCTGAAGAAATATACTTACGGAAAGCATATAGTTGCCC 2965 | | ||| ||||| | |||||||| |||||||| ||||||||||||||||| || || | Sbjct 2785 A-T-AAGAGTTCACTTGAATGCTCTAAAGAAATACACTTACGGAAAGCATATTGTCGCGC 2842 Query 2966 GAGTAGAGAAA 2976 | || || ||| Sbjct 2843 GTGTTGA-AAA 2852 Score = 71.3 bits (38), Expect = 9e-11 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 271 TCAGAAGAGGAGTTAAGGTCTGATCCAGCGTACATTTCGTATTATTACTCGAATGTGAAT 330 || || |||||| | ||||||||||| || || | || || ||||| ||||| || ||| Sbjct 202 TCTGAGGAGGAGCTTAGGTCTGATCCTGCTTATTTATCTTACTATTATTCGAACGTAAAT 261 Query 331 CTAAACCCTAGGCTTCCGCCACCTCTTTTGTCTAAAGAGGACTGGAGGTT 380 || || |||||| | || ||||| |||||||| ||||| || ||| |||| Sbjct 262 CTTAATCCTAGGTTGCCTCCACCACTTTTGTCCAAAGAAGATTGGCGGTT 311 >Niben101Scf08041g00013.1 sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog 1 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=4023 Score = 540 bits (292), Expect = 6e-152 Identities = 679/868 (78%), Gaps = 17/868 (2%) Strand=Plus/Plus Query 1960 TTT-GCTTCCTCGTTATTGGATGAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTATC 2018 ||| || ||||| || |||| ||||| || ||||| |||| | ||||||||| || || Sbjct 2371 TTTAGCGTCCTCCCTACTGGAAGAGTTCAAAAGCAACAAGACCAGGTGTTTTGAACTTTC 2430 Query 2019 AGAGATTGAAGGCCACGTCGTTCAGTTCAGCGCGGACCAGTATGGGAGCCGGTTCATTCA 2078 ||| |||| ||||||||| ||| |||| || || |||||||||||||| || |||||||| Sbjct 2431 AGAAATTGCAGGCCACGTTGTTGAGTTTAGTGCCGACCAGTATGGGAGTCGATTCATTCA 2490 Query 2079 ACAAAAACTTGAGACTGCTACTACAGACGAGAAAAACATGGTTTTCCATGAAATTATGCC 2138 ||||| || || ||||| || || || |||||||||||||| || || ||||| | || Sbjct 2491 GCAAAAGCTGGAAACTGCCACCACTGAGGAGAAAAACATGGTGTTTCAGGAAATATTCCC 2550 Query 2139 GCAAGCCCTTTCTTTGATGACTGATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTCGA 2198 ||||| ||| |||||||||||||||| ||||| |||||||| |||||||||||||| || Sbjct 2551 CCAAGCTCTTACTTTGATGACTGATGTCTTTGGAAATTATGTAATCCAGAAGTTTTTTGA 2610 Query 2199 ACATGGAAGTGCATCCCAGATAAGAGAACTGGCTGACCAGCTCAATGGGCATGTACTCAC 2258 |||||||| ||||| |||| |||||| | |||| | ||||| |||||||||| | || Sbjct 2611 ACATGGAATGGCATCTCAGAGGAGAGAATTAGCTGGCAAGCTCTTTGGGCATGTATTAAC 2670 Query 2259 CCTTAGCCTTCAGATGTATGGTTGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAACT 2318 || |||||||| ||||||||||| || || || |||||||| ||||| || ||||| | Sbjct 2671 ACTGAGCCTTCAAATGTATGGTTGTCGCGTCATACAGAAGGCAATAGAAGTAGTTGACGT 2730 Query 2319 GGATCAACAGACTAAAATGGTCGCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAGA 2378 ||| || ||| | ||||||| | ||||||||||| || | ||||| ||||| ||||| Sbjct 2731 GGACCAGAAGATTGAAATGGTTGAGGAGCTTGATGGTAATATCATGCGTTGTGTAAGAGA 2790 Query 2379 TCAAAATGGGAATCATGTAATCCAGAAGTGTATCGAATGCATTCCAGAGGA-AGCTATCC 2437 ||| ||||| ||||| || || ||||| ||||| ||||| | ||||| || || || | Sbjct 2791 TCAGAATGGAAATCACGTTATTCAGAAATGTATTGAATGTGTACCAGAAGATCGC-ATTC 2849 Query 2438 AGTTCATTGTTTCCACATTTCATGATCAAGTTGTGACATTGTCCACACATCCATATGGAT 2497 | || || | || |||||| || ||||| | || | ||||| ||||||||||| | Sbjct 2850 AATTTATCATCTCGACATTTTTTGGACAAGTCATTACTCTCTCCACCCATCCATATGGCT 2909 Query 2498 GTCGGGTCATACAGAGAGTCTTGGAACATTGCCATAATCCTGACACCCAGAGCATTGTGA 2557 |||| || ||||||||||| ||||||||||| |||| || ||||| || | |||| Sbjct 2910 GTCGAGTGATACAGAGAGTATTGGAACATTGTAGCTATCCAGAAACCCAAAGTAAAGTGA 2969 Query 2558 TGAATGAGATTATGCAATCGATTTGCATGTTGGCGCAAGATCAATATGGGAATTATGTTG 2617 || | || || || ||| || |||||||||| |||||||| ||||| |||||||||| Sbjct 2970 TGGAAGAAATCCTGGGATCTGTTAGCATGTTGGCACAAGATCAGTATGGTAATTATGTTG 3029 Query 2618 TTCAGCATGTACTGGAACATGGGAAGCCAGAGGAGCGTTCGTCTATAATT-AGTAAGCT- 2675 |||||||||||||||| || |||||||| | ||||| || | |||||| || || || Sbjct 3030 TTCAGCATGTACTGGAGCACGGGAAGCCGCATGAGCGCTCTACCATAATTCAGGAA-CTA 3088 Query 2676 GATGGGACAGATAGTTCAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTG 2735 | ||||| |||| || || |||||||| || || |||||||| |||||||| |||||||| Sbjct 3089 GCTGGGA-AGATTGTGCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTAGAGAAGTG 3147 Query 2736 CTTAAGCTTCG-G-AACTCC--CGAA-GAACGTCAGACCTTGGTAGACGAGATGCTTGGC 2790 |||| ||| | || ||| |||| ||| | | || | ||| | ||||||||||| Sbjct 3148 TTTAA-CTTATTGTAATTCCAGCGAACGAAAG-CT-AC-T-GGTGAATGAGATGCTTGGT 3202 Query 2791 ACAACTGACGAAAATGAACCTCTTCAGG 2818 || ||||| |||||||| |||||||||| Sbjct 3203 ACGACTGATGAAAATGAGCCTCTTCAGG 3230 Score = 137 bits (74), Expect = 8e-31 Identities = 135/164 (82%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 2818 GCAATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGAC 2877 || |||||||||||||||||||| || ||||||||||||||||| |||| |||||| | Sbjct 3281 GCTATGATGAAAGATCAGTTTGCGAATTACGTTGTACAGAAAGTTTTGGAAACTTGTAGC 3340 Query 2878 GACCAGCAACTTGAACTCAT--TCTCAACCGAATCAAG-GTTCATCTAAATGCTCTGAAG 2934 || ||||||| ||| || || | || | || | ||| ||||| | |||||||||||| Sbjct 3341 GATCAGCAACGTGAGCTGATCATGTCGAG-GA-T-AAGAGTTCACTTGAATGCTCTGAAG 3397 Query 2935 AAATATACTTACGGAAAGCATATAGTTGCCCGAGTAGAGAAACT 2978 ||||| ||||||||||||||||| |||||||| || || ||||| Sbjct 3398 AAATACACTTACGGAAAGCATATTGTTGCCCGTGTTGAAAAACT 3441 Score = 78.7 bits (42), Expect = 5e-13 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 271 TCAGAAGAGGAGTTAAGGTCTGATCCAGCGTACATTTCGTATTATTACTCGAATGTGAAT 330 || ||||||||| | ||||||||||| || ||| | || || ||||||||||| || || Sbjct 796 TCTGAAGAGGAGCTTAGGTCTGATCCTGCTTACTTATCTTACTATTACTCGAACGTAAAC 855 Query 331 CTAAACCCTAGGCTTCCGCCACCTCTTTTGTCTAAAGAGGACTGGAGGTTCACACAG 387 || || |||||| | || || || |||||||| ||||| || ||| |||| ||||| Sbjct 856 CTTAATCCTAGGTTGCCTCCTCCACTTTTGTCCAAAGAAGATTGGCGGTTTTCACAG 912 >Niben101Scf05278g01011.1 sp|Q9ZW06|PUM2_ARATH *-*- Pumilio homolog 2 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=4290 Score = 529 bits (286), Expect = 1e-148 Identities = 677/869 (78%), Gaps = 14/869 (2%) Strand=Plus/Plus Query 1957 AGCTTTGCTTCCTCGTTATTGGATGAGTTTAAGAGCAATAAGAGTAAGTGTTTTGAGCTA 2016 ||||| || ||||| || |||| ||||| || ||||| |||| | ||||||||| || Sbjct 2725 AGCTTAGCGTCCTCCCTACTGGAAGAGTTCAAAAGCAACAAGACCAGGTGTTTTGAACTT 2784 Query 2017 TCAGAGATTGAAGGCCACGTCGTTCAGTTCAGCGCGGACCAGTATGGGAGCCGGTTCATT 2076 ||||| |||| ||||||||| ||| |||| || || |||||||||||||| || |||||| Sbjct 2785 TCAGAAATTGCAGGCCACGTTGTTGAGTTTAGTGCCGACCAGTATGGGAGTCGATTCATT 2844 Query 2077 CAACAAAAACTTGAGACTGCTACTACAGACGAGAAAAACATGGTTTTCCATGAAATTATG 2136 || ||||| || || ||||| || || || |||||||||||||| || | |||||| | Sbjct 2845 CAGCAAAAGCTGGAAACTGCCACCACTGAGGAGAAAAACATGGTGTTTGAGGAAATTTTC 2904 Query 2137 CCGCAAGCCCTTTCTTTGATGACTGATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTC 2196 || ||| | ||| |||| ||||||||||| ||||| ||||| || |||||||||||||| Sbjct 2905 CCCCAAACTCTTACTTTAATGACTGATGTCTTTGGAAATTACGTAATCCAGAAGTTTTTT 2964 Query 2197 GAACATGGAAGTGCATCCCAGATAAGAGAACTGGCTGACCAGCTCAATGGGCATGTACTC 2256 |||||||||| ||||| |||| |||||| | ||| | ||||| |||||||||| | Sbjct 2965 GAACATGGAATGGCATCGCAGAGGAGAGAATTAGCTAGCAAGCTCTTTGGGCATGTATTA 3024 Query 2257 ACCCTTAGCCTTCAGATGTATGGTTGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAA 2316 || || |||||||| ||||||||||| || || || |||||||| ||||| || || || Sbjct 3025 ACACTGAGCCTTCAAATGTATGGTTGTCGCGTCATACAGAAGGCAATAGAAGTAGTCGAC 3084 Query 2317 CTGGATCAACAGACTAAAATGGTCGCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGA 2376 |||| || ||| | ||||||| | ||||||||||| || | ||||| ||||| ||| Sbjct 3085 GTGGACCAGAAGATTGAAATGGTTGAGGAGCTTGATGGTAATATCATGCGTTGTGTAAGA 3144 Query 2377 GATCAAAATGGGAATCATGTAATCCAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATC 2436 ||||| ||||||||||| || || ||||| ||||| ||||| | ||||| || || Sbjct 3145 GATCAGAATGGGAATCACGTTATTCAGAAATGTATTGAATGTGTACCAGAAGATCACATT 3204 Query 2437 CAGTTCATTGTTTCCACATTTCATGATCAAGTTGTGACATTGTCCACACATCCATATGGA 2496 || || || | || |||||| || |||||| | || | ||||| ||||||||||| Sbjct 3205 CAATTTATCATCTCGACATTTTTTGGACAAGTTATTACTCTCTCCACCCATCCATATGGC 3264 Query 2497 TGTCGGGTCATACAGAGAGTCTTGGAACATTGCCATAATCCTGACACCCAGAGCATTGTG 2556 ||||| || ||||||||||| ||||||||||| |||| || ||||| || | ||| Sbjct 3265 TGTCGAGTGATACAGAGAGTATTGGAACATTGTAGCTATCCAGAAACCCAAAGTAAAGTG 3324 Query 2557 ATGAATGAGATTATGCAATCGATTTGCATGTTGGCGCAAGATCAATATGGGAATTATGTT 2616 ||| | || || || ||| || |||||||||| |||||||| ||||| ||||||||| Sbjct 3325 ATGGAAGAAATCCTGGGATCTGTTAGCATGTTGGCACAAGATCAGTATGGTAATTATGTT 3384 Query 2617 GTTCAGCATGTACTGGAACATGGGAAGCCAGAGGAGCGTTCGTCTATAATT-AGTAAGCT 2675 ||||||||||||||||| || |||||||| | ||||| || | |||||| || || || Sbjct 3385 GTTCAGCATGTACTGGAGCACGGGAAGCCGCATGAGCGCTCTACCATAATTCAGGAA-CT 3443 Query 2676 -GATGGGACAGATAGTTCAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGT 2734 | ||||| |||| || || |||||||| || || |||||||| |||||||| ||||||| Sbjct 3444 AGCTGGGA-AGATTGTGCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTAGAGAAGT 3502 Query 2735 GCTTAAGCTTCG-G-AACTCC--CGAA-GAACGTCAGACCTTGGTAGACGAGATGCTTGG 2789 | |||| ||| | || ||| |||| ||| | | || | ||| | ||||||||||| Sbjct 3503 GTTTAA-CTTATTGTAATTCCAGCGAACGAAAG-CT-AC-T-GGTGAATGAGATGCTTGG 3557 Query 2790 CACAACTGACGAAAATGAACCTCTTCAGG 2818 ||| ||||| |||||||| |||||||||| Sbjct 3558 CACGACTGATGAAAATGAGCCTCTTCAGG 3586 Score = 132 bits (71), Expect = 4e-29 Identities = 134/164 (82%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 2818 GCAATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGAC 2877 || |||||||||||||||||||| || ||||||||||||||||| |||| |||||| | Sbjct 3637 GCTATGATGAAAGATCAGTTTGCAAATTACGTTGTACAGAAAGTTTTGGAAACTTGTAGC 3696 Query 2878 GACCAGCAACTTGAACTCAT--TCTCAACCGAATCAAG-GTTCATCTAAATGCTCTGAAG 2934 || ||||||| ||| || || | || | || | ||| |||||| | |||||||||||| Sbjct 3697 GATCAGCAACGTGAGCTGATCATGTCGAG-GA-T-AAGAGTTCATTTGAATGCTCTGAAG 3753 Query 2935 AAATATACTTACGGAAAGCATATAGTTGCCCGAGTAGAGAAACT 2978 ||||| ||||||||||||||||| ||| | || || || ||||| Sbjct 3754 AAATACACTTACGGAAAGCATATTGTTACTCGTGTTGAAAAACT 3797 Score = 73.1 bits (39), Expect = 2e-11 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 271 TCAGAAGAGGAGTTAAGGTCTGATCCAGCGTACATTTCGTATTATTACTCGAATGTGAAT 330 || || |||||| | ||||||||||| || ||| | || || ||||||||||| || || Sbjct 1119 TCTGAGGAGGAGCTTAGGTCTGATCCCGCTTACTTATCTTACTATTACTCGAACGTAAAC 1178 Query 331 CTAAACCCTAGGCTTCCGCCACCTCTTTTGTCTAAAGAGGACTGGAGGTTCACACAG 387 || || |||||| | || || || |||||||| ||||| || ||| |||| ||||| Sbjct 1179 CTTAATCCTAGGTTGCCTCCTCCACTTTTGTCCAAAGAAGATTGGCGGTTTTCACAG 1235 >Niben101Scf07880g03027.1 sp|Q9ZW07|PUM1_ARATH *-*- Pumilio homolog 1 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3143 Score = 351 bits (190), Expect = 3e-95 Identities = 454/583 (78%), Gaps = 12/583 (2%) Strand=Plus/Plus Query 2046 CAGCGCGGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACTACAGA 2105 |||| | ||||||||||||||||| |||||||| ||||| || || ||||| || || || Sbjct 1605 CAGCACCGACCAGTATGGGAGCCGATTCATTCAGCAAAAGCTGGAAACTGCCACCACTGA 1664 Query 2106 CGAGAAAAACATGGTTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACTGATGT 2165 |||||||||||||| || || |||||| | || ||||| ||| |||||||||||||||| Sbjct 1665 GGAGAAAAACATGGTGTTTCAGGAAATTTTCCCCCAAGCTCTTACTTTGATGACTGATGT 1724 Query 2166 GTTTGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAAGTG-CATCCCAGATAAGAG 2224 ||||| ||||| || |||||||||||||| |||||||||| || |||| |||| |||| Sbjct 1725 CTTTGGAAATTACGTAATCCAGAAGTTTTTTGAACATGGAA-TGACATCTCAGAGGAGAG 1783 Query 2225 AACTGGCTGACCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGTTGCC 2284 || | |||| | ||||| |||||| || | || || |||||||| ||||||||||| | Sbjct 1784 AATTAGCTGGCAAGCTCTTTGGGCACGTTTTAACACTGAGCCTTCAAATGTATGGTTGTC 1843 Query 2285 GAGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTCGCTG 2344 | || || |||||||| ||||| |||||||| || | || ||| |||||||| | | Sbjct 1844 GCGTCATACAGAAGGCAATAGAAGTGGTTGACGTGAACCAGAAGATCAAAATGGTTGAGG 1903 Query 2345 AGCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTAATCCAGA 2404 |||||||||| || | ||||||||||| ||||||| ||||| |||||||| || |||| Sbjct 1904 AGCTTGATGGTAATATCATGCGCTGTGTACGAGATCAGAATGGAAATCATGTCATTCAGA 1963 Query 2405 AGTGTATCGAATGCATTCCAGAGGAAGCTATCCAGTTCA-TT-GTT-TC-CA-CATTTCA 2459 | ||||| ||||| | ||||| || | | | | |||| || || || || ||||| Sbjct 1964 AATGTATTGAATGTGTACCAGAAGAT-C-A-C-A-TTCAATTTGTCATCTCAACATTTTT 2018 Query 2460 TGATCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGAGAGTCTT 2519 | |||||||| || | ||||| ||||||||||| ||||| || ||||||||||| || Sbjct 2019 CGGACAAGTTGTTACTCTCTCCACCCATCCATATGGCTGTCGAGTAATACAGAGAGTATT 2078 Query 2520 GGAACATTGCCATAATCCTGACACCCAGAGCATTGTGATGAATGAGATTATGCAATCGAT 2579 |||||| || |||| || ||||| | | |||||| | || || || ||| | Sbjct 2079 GGAACACTGTAGCGATCCAGAAACCCAAAATAAAGTGATGGAAGAAATCTTGGGATCTGT 2138 Query 2580 TTGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAG 2622 |||||||||| | |||||| ||||| ||||||||||||||| Sbjct 2139 AAGCATGTTGGCACTAGATCAGTATGGTAATTATGTTGTTCAG 2181 Score = 196 bits (106), Expect = 1e-48 Identities = 239/303 (79%), Gaps = 10/303 (3%) Strand=Plus/Plus Query 2678 TGGGACAGATAGTTCAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCT 2737 ||||| |||| || || |||||||| || || |||||||| |||||||| |||||||| | Sbjct 2190 TGGGA-AGATTGTGCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTTGAGAAGTGTT 2248 Query 2738 TAAGC-TTCGGAACTCCCGAAGAACGTCAGACCTTGGTAGACGAGATGCTTGGCACAACT 2796 ||| || | || || | ||||| ||| |||| | ||||||||||| | ||| Sbjct 2249 TAACTTTTTGTAATTCTAG-TGAACGACAGCTACTGGTGAATGAGATGCTTGGTATGACT 2307 Query 2797 GACGAAAATGAACCTCTTCAGGCAATGATGAAAGATCAGTTTGCCAACTACGTTGTACAG 2856 || |||||||| ||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct 2308 GATGAAAATGAGCCTCTTCAGGCTATGATGAAAGATCAGTTTGCAAATTACGTTGTACAG 2367 Query 2857 AAAGTGCTGGAGACTTGTGACGACCAGCAACTTGAACTCAT--TCTCAACCGAATCAAG- 2913 ||||| |||| |||||| ||| ||||||| ||| || || | || | || | ||| Sbjct 2368 AAAGTTTTGGAAACTTGTAGCGATCAGCAACGTGAGCTGATCATGTCGAG-GA-T-AAGA 2424 Query 2914 GTTCATCTAAATGCTCTGAAGAAATATACTTACGGAAAGCATATAGTTGCCCGAGTAGAG 2973 ||||| | ||||||||||||||||| ||||||||||||||||| || || || || || Sbjct 2425 GTTCACTTGAATGCTCTGAAGAAATACACTTACGGAAAGCATATTGTCGCTCGTGTTGA- 2483 Query 2974 AAA 2976 ||| Sbjct 2484 AAA 2486 >Niben101Scf00734g00001.1 sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog 4 IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3002 Score = 213 bits (115), Expect = 1e-53 Identities = 605/844 (72%), Gaps = 24/844 (3%) Strand=Plus/Plus Query 2052 GGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACTACAGACGAGAA 2111 ||| ||||||||||| || || |||||| | || || || ||||| ||| || || | Sbjct 1735 GGATCAGTATGGGAGTCGATTTATTCAAAAGAAGCTGGAAACTGCCACTGTTGA--AG-A 1791 Query 2112 AAACATG--G-TTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACTGATGTGTT 2168 ||| ||| | | |||| |||||| | || ||||| | ||| ||||| ||||| || Sbjct 1792 AAAGATGAAGATATTCCCAGAAATTCTTCCTCAAGCTCACAGTTTAATGACCGATGTCTT 1851 Query 2169 TGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAA-GTGCA-TCCCAGATAAGAGAA 2226 ||| |||||||| || |||||||| | || |||||| | | || ||| ||| ||| Sbjct 1852 TGGAAATTATGTCATTCAGAAGTTCCTTGAGAATGGAACGGAGAGTCAAAGA-AAG-GAA 1909 Query 2227 CTGGCTGA-CCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGTTGCCG 2285 | || || || || | ||| ||||| | | || || ||||| |||||||| ||| | Sbjct 1910 TTAGC-GAGGCAACTTATTGGTCATGTTTTGCCTCTGAGTCTTCAAATGTATGGATGCAG 1968 Query 2286 AGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTCGCTGA 2345 ||| || |||||||| | ||||| |||| |||| | ||||||||||||||| | || Sbjct 1969 AGTTATTCAGAAGGCTTTGGAGGTCTTTGATGTGGAACTGCAGACTAAAATGGTCACAGA 2028 Query 2346 GCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTAATCCAGAA 2405 || || ||| |||| ||| |||||| | ||||| ||||| |||||||| || || || Sbjct 2029 ACTGGACGGCTATGTAATGAAATGTGTTCGTGATCAGAATGGTAATCATGTTATTCAAAA 2088 Query 2406 GTGTATCGAATGCAT-T-CCAGAGGA-AGCTATCCAGTTCATTGTTTCCACATTTCATGA 2462 ||| || ||| ||| | || | || || || || |||||||| | | || || Sbjct 2089 GTGCATAGAA--CATGTACCTCAAGATAG-AATTCATTTCATTGTAGCTTCCTTCTTTGG 2145 Query 2463 TCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGAGAGT-CTTGG 2521 ||||||||| | ||||| |||||||| ||||| || || || || |||||||| ||| | Sbjct 2146 GCAAGTTGTGTCTTTGTCTACACATCCTTATGGTTGCCGTGTAATTCAGAGAGTTCTT-G 2204 Query 2522 AACATTGCCATAATCCTGACACCCAGAGCATTGTGATGAATGAGATTATGCAATCGATTT 2581 | || || | | | || || || | ||| | ||| | || || |||||| | || Sbjct 2205 AGCACTGTAACGACTCAGAGACACAAAAGATTATTATGGACGAAATAATGCAAGCTGTTG 2264 Query 2582 GCA-TGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTGGAACATGGG 2640 ||| | || | | ||||| ||||| || ||||| |||||||| |||| ||||||| Sbjct 2265 GCACTCTT-GTGTTGGATCAGTATGGAAACTATGTCATTCAGCATTTACTCCAACATGGT 2323 Query 2641 AAGCCAGAGGAGCGTTC-GTCTATAATTAGTAAGCTGATGGGACAGATAGTTCAGATGAG 2699 || ||| | ||| | || || |||||| | || || | ||||| || || ||||||| Sbjct 2324 AAACCACATGAGAGGTCTGT-TATAATAGGCAAACTTACTGGACATATTGTAAAGATGAG 2382 Query 2700 CCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAGCTTCGGAACTCCCGAAGA 2759 || || |||| ||| || || || || ||||||||||| | ||| | ||| || || || Sbjct 2383 TCAGCACAAATATGCTTCTAACGTCGTTGAGAAGTGCTTGATCTTTGCAACGCCAGAGGA 2442 Query 2760 ACGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGACGAAAATGAACCTCTTCAGGC 2819 ||||| | |||| | ||||||||||| | || | |||||||||||||| ||||| Sbjct 2443 GCGTCAATTCCTGGTGAATGAGATGCTTGGTTCGACACAAGAAAATGAACCTCTACAGGC 2502 Query 2820 AATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGACGA 2879 |||||||| |||| || | ||||| || || ||||| || || ||||| ||||| || Sbjct 2503 TATGATGAAGGATCCTTTCGGAAACTATGTAGTGCAGAAGGTTCTCGAGACATGTGATGA 2562 Query 2880 CCAG 2883 ||| Sbjct 2563 TCAG 2566 >Niben101Scf05917g00010.1 Unknown protein Length=1619 Score = 213 bits (115), Expect = 1e-53 Identities = 147/163 (90%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 2622 GCATGTACTGGAACATGGGAAGCCAGAGGAGCGTTCGTCTATAATTAGTAAGCTGATGGG 2681 |||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||| || Sbjct 190 GCATTTACTGGAACATGGGATGCCAGCGGAGCGTTCGTCTATAATTAGTTAGCTGATAGG 249 Query 2682 ACAGATAGTTCAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAG 2741 | |||||| ||||||||||| ||||| |||||||| ||| || |||||||||| ||||| Sbjct 250 ATGGATAGTCCAGATGAGCCAGCAAAAGTTTGCCTCTAATTTTTTGGAGAAGTGATTAAG 309 Query 2742 CTTCGGAACTCCCGAAGAACGTCAGACCTTGGTAGACGAGATG 2784 ||||| |||||||| |||||||||||||||||||||||||||| Sbjct 310 CTTCGCAACTCCCGGAGAACGTCAGACCTTGGTAGACGAGATG 352 >Niben101Scf06407g00011.1 sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog 4 IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=2751 Score = 196 bits (106), Expect = 1e-48 Identities = 604/846 (71%), Gaps = 28/846 (3%) Strand=Plus/Plus Query 2052 GGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACTACAGACGAGAA 2111 ||| ||||||||||| || || |||||| | || || || | ||| ||| || || | Sbjct 1483 GGATCAGTATGGGAGTCGATTTATTCAAAAGAAGCTGGAAAATGCCACTGTTGA--AG-A 1539 Query 2112 AAACATG--G-TTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGACTGATGTGTT 2168 ||| ||| | | |||| |||||| | || || || | ||| ||||| ||||| || Sbjct 1540 AAAGATGAAGATATTCCCAGAAATTCTTCCTCATGCTCACAGTTTAATGACCGATGTCTT 1599 Query 2169 TGGTAATTATGTGATCCAGAAGTTTTTCGAACATGGAA-GTGCA-TCCCAGATAAGAGAA 2226 ||| |||||||| || |||||||| | || ||||||| | | || ||| ||| ||| Sbjct 1600 TGGAAATTATGTCATTCAGAAGTTCCTTGAGCATGGAACGGAGAGTCAAAGA-AAG-GAA 1657 Query 2227 CTGGCTGA-CCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTATGGTTGCCG 2285 | || || || || | ||| ||||| | | || || ||||| |||||||| ||| | Sbjct 1658 TTAGC-GAGGCAACTTATTGGTCATGTTTTTCCTCTAAGTCTTCAAATGTATGGATGCAG 1716 Query 2286 AGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATGGTCGCTGA 2345 ||| || |||||||| | ||||| |||| |||| | |||||||||||||| | || Sbjct 1717 AGTTATTCAGAAGGCTTTGGAGGTCTTTGATGTGGAACTGCAGACTAAAATGGTTACAGA 1776 Query 2346 GCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTAATCCAGAA 2405 ||| |||||| |||| ||| |||||| |||||||| || |||||||| || || || Sbjct 1777 GCTGGATGGCTATGTAATGAAATGTGTTCATGATCAAAACGGTAATCATGTTATTCAAAA 1836 Query 2406 GTGTATCGAATGCAT-T-CCAGAGGA-AGCTATCCAGTTCATTGTTTCCACATTTCATGA 2462 ||| || ||| ||| | || | || || || || |||||||| | | || || Sbjct 1837 GTGCATAGAA--CATGTACCTCAAGATAG-AATTCATTTCATTGTAGCTTCCTTCTTTGG 1893 Query 2463 TCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGAGAGT-CTTGG 2521 ||||||||| | ||||| |||||||| ||||| || || || || |||||||| ||| | Sbjct 1894 GCAAGTTGTGTCTTTGTCTACACATCCTTATGGTTGCCGTGTAATTCAGAGAGTTCTT-G 1952 Query 2522 AACATTGCCA-TAATCCTGACACCCAGAGCATTGTGATGAATGAGATTATGCAATCGATT 2580 | || || | | ||| || || | | ||| | ||| | || || |||||| | || Sbjct 1953 AGCACTGTAACGACTCC-GAGACAGAAAAGATTATTATGGACGAAATAATGCAAGCTGTT 2011 Query 2581 TGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTGGAACATGGG 2640 ||| | | | ||||| ||||| || ||||| ||||||||||||| |||| || Sbjct 2012 GGCACTCTAGTGTTGGATCAGTATGGAAACTATGTCATTCAGCATGTACTCCAACACGGT 2071 Query 2641 AAGCCAGAGGAGCGTTC-GTCTATAATTAGTAAGCTGA-TGG-GACAGATAGTTCAGATG 2697 || ||| | ||| | || || |||||| | || || | ||| || | || || ||||| Sbjct 2072 AAACCACACGAGAGGTCTGT-TATAATAGGCAAACTTACTGGAGA-A-ATTGTAAAGATG 2128 Query 2698 AGCCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAGCTTCGGAACTCCCGAA 2757 || || || |||| ||| || || || || ||||||||||| | ||| | || || || Sbjct 2129 AGTCAGCACAAATATGCTTCTAACGTCGTTGAGAAGTGCTTGATCTTTGCTACGCCAGAG 2188 Query 2758 GAACGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGACGAAAATGAACCTCTTCAG 2817 || ||||||| |||| | ||||||||||| | || | |||||||| ||||| ||| Sbjct 2189 GAGCGTCAGATTCTGGTGAATGAGATGCTTGGTTCGACACAAGAAAATGAGCCTCTACAG 2248 Query 2818 GCAATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACTTGTGAC 2877 || |||||||| |||| |||| ||||| || || ||||| || || ||||| ||||| Sbjct 2249 GCTATGATGAAGGATCCTTTTGGAAACTATGTAGTGCAGAAGGTTCTCGAGACATGTGAT 2308 Query 2878 GACCAG 2883 || ||| Sbjct 2309 GATCAG 2314 >Niben101Scf00863g17026.1 sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog 4 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3179 Score = 182 bits (98), Expect = 4e-44 Identities = 668/946 (71%), Gaps = 28/946 (3%) Strand=Plus/Plus Query 2044 TTCAGCGCGGACCAGTATGGGAGCCGGTTCATTCAACAAAAACTTGAGACTGCTACT-AC 2102 |||||| | || ||| | ||||| || || |||||||| || || || ||||| | | | Sbjct 1797 TTCAGCACTGATCAGCACGGGAGTCGATTTATTCAACAGAAGCTGGAAACTGCCAGTGTC 1856 Query 2103 AGACGAGAAAAACATG--G-TTTTCCATGAAATTATGCCGCAAGCCCTTTCTTTGATGAC 2159 | | || |||| ||| | | |||| |||||||| | || || | | | | ||||| Sbjct 1857 A-A--AG-AAAAGATGAAGATATTCCCGGAAATTATTTCTCATGCTCATAGTCTAATGAC 1912 Query 2160 TGATGTGTTTGGTAATTATGTGATCCAGAAGTTTTTCGAACATGG-A-AGTGCATCCCAG 2217 |||||| ||||| |||||||| || || |||||| | || ||||| | |||| || || Sbjct 1913 TGATGTCTTTGGCAATTATGTTATACAAAAGTTTCTTGAGCATGGCACAGTGAGTCAAAG 1972 Query 2218 ATAAGAGAACTGGCTGACCAGCTCAATGGGCATGTACTCACCCTTAGCCTTCAGATGTAT 2277 | ||| ||| | || ||| || | ||| || || | | || || || || |||||| Sbjct 1973 A-AAG-GAATTAGCAAGCCAACTTATTGGTCACGTTTTGCCTCTGAGTCTACATATGTAT 2030 Query 2278 GGTTGCCGAGTGATCCAGAAGGCCATAGAGGTGGTTGAACTGGATCAACAGACTAAAATG 2337 |||||| |||| || |||||||| | ||||| |||| |||| | |||| | ||||| Sbjct 2031 GGTTGCAGAGTAATTCAGAAGGCTTTGGAGGTCATTGATGTGGAACTGCAGAGTCAAATG 2090 Query 2338 GTCGCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAGATCAAAATGGGAATCATGTA 2397 || | || | |||||| ||| ||| |||||| | ||||| ||||| |||||||| Sbjct 2091 GTTACAGAATTAGATGGCTCTGTAATGAAATGTGTTCGTGATCAGAATGGTAATCATGTT 2150 Query 2398 ATCCAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATCCAGTTCATTGT-TTCCA-CAT 2455 ||||||||||| || ||||| |||| | ||| ||| | | | | | || || ||| Sbjct 2151 ATCCAGAAGTGCATAGAATGTGTTCC---GCAAG--ATCAAATCCGCTTTATTACAGCAT 2205 Query 2456 --TTC-ATGATCAAGTTGTGACATTGTCCACACATCCATATGGATGTCGGGTCATACAGA 2512 ||| || || |||||| | | || || ||||| ||||| || || || || |||| Sbjct 2206 CCTTCTTTGGGCATGTTGTGTCTCTATCTACTCATCCCTATGGCTGCCGTGTAATTCAGA 2265 Query 2513 GAGTCTTGGAACATTGCCATAATCCTGACAC-CCAGAGCATTGTGATGAATGAGATTATG 2571 || || | || || || || | || | || | | || ||| | |||||||| || || Sbjct 2266 GAATCCTTGAGCACTGTGATGACCCGGCGACGCAACAG-ATTATTATGAATGAAATACTG 2324 Query 2572 CAATCGATTTGCATGTTGGCGCAAGATCAATATGGGAATTATGTTGTTCAGCATGTACTG 2631 || | | || | | | | ||||| || ||||| ||||| ||||||||||| ||| Sbjct 2325 CAGGCTGTATGTACTCTAGTGATGGATCAGTACGGGAACTATGTCGTTCAGCATGTGCTG 2384 Query 2632 GAACATGGGAAGCCAGAGGAGCGTTCGTCTATAATTAGTAAGCTGATGGGACAGATAGTT 2691 ||||||| || || | ||| | || ||||||| | ||||| | ||||| || | Sbjct 2385 CAACATGGTAAACCGCATGAGAGGTCTACTATAATAACCAAGCTTACTGGACAAATTATG 2444 Query 2692 CAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAGAAGTGCTTAAGCTTCGGAACT 2751 ||||||| || || |||||||| || ||||| || ||||||||||| || | | | Sbjct 2445 AAGATGAGTCAGCATAAATTTGCTTCTAATGTCGTCGAGAAGTGCTTGGTATTTGCCAGT 2504 Query 2752 CCCGAAGAACGTCAGACCTTGGTAGACGAGATGCTTGGCACAACTGACGAAAATGAACCT 2811 || || |||||||||| | |||| | || |||||||| ||||| |||||||| ||| Sbjct 2505 CCAGAGGAACGTCAGATCCTGGTGAATGAAATGCTTGGTTTGACTGATGAAAATGAGCCT 2564 Query 2812 CTTCAGGCAATGATGAAAGATCAGTTTGCCAACTACGTTGTACAGAAAGTGCTGGAGACT 2871 || ||||| |||||||| |||| |||| ||||| || || ||||| || || ||||| Sbjct 2565 CTACAGGCTATGATGAAGGATCCCTTTGGAAACTATGTCGTGCAGAAGGTTCTTGAGACC 2624 Query 2872 TGTGACGACCAGCAACT-TGAACTCA-TTCTCAACCGAATCAAGGTTCATCTAAATGCTC 2929 ||||| || || | | |||| ||| |||| || || | || || || | ||||| Sbjct 2625 TGTGATGATCA-AAGCCGTGAA-TCAATTCTTTCTCGCATTAGAGTACACCTTAGTGCTC 2682 Query 2930 TGAAGAAATATACTTACGGAAAGCATATAGTTGCCCGAGTAGAGAA 2975 | ||||| || ||||| || || ||||| || | || |||||||| Sbjct 2683 TCAAGAAGTACACTTATGGCAAACATATCGTATCTCGTGTAGAGAA 2728 >Niben101Scf01519g03013.1 sp|Q9SS47|PUM4_ARATH *-*- Pumilio homolog 4 IPR012940 (Nucleic acid binding NABP), IPR016024 (Armadillo-type fold) GO:0003723 (RNA binding), GO:0005488 (binding) Length=3187 Score = 115 bits (62), Expect = 4e-24 Identities = 361/507 (71%), Gaps = 14/507 (3%) Strand=Plus/Plus Query 2318 TGGATCAACAGACTAAAATGGTCGCTGAGCTTGATGGCCATGTTATGCGCTGTGTTAGAG 2377 |||| | ||||| | |||| || | ||| | |||||| ||| ||| |||||| | | Sbjct 2140 TGGAACTACAGAGTCAAATAGTAACAGAGTTAGATGGCTCTGTAATGAAATGTGTTCGTG 2199 Query 2378 ATCAAAATGGGAATCATGTAATCCAGAAGTGTATCGAATGCATTCCAGAGGAAGCTATCC 2437 |||| || || |||||||| ||||||||||| || ||||| |||| | ||| ||| Sbjct 2200 ATCAGAACGGTAATCATGTTATCCAGAAGTGCATAGAATGTGTTCC---GCAAG--ATCA 2254 Query 2438 AGT-T-CATTGTTTCCACAT--TTC-ATGATCAAGTTGTGACATTGTCCACACATCCATA 2492 | | | | || || | |||| ||| || || |||||| | | || || ||||| || Sbjct 2255 AATCTGCTTTATTACAACATCCTTCTTTGGGCATGTTGTGTCTCTATCTACTCATCCCTA 2314 Query 2493 TGGATGTCGGGTCATACAGAGAGTCTTGGAACATTGCCATAATCCTGAC-AC-CCAGAGC 2550 ||| || || || || |||||| || | || || || || | |||| | || | | || Sbjct 2315 TGGCTGCCGTGTAATTCAGAGAATCCTTGAGCACTGTGATGA-CCTGGCGACGCAACAG- 2372 Query 2551 ATTGTGATGAATGAGATTATGCAATCGATTTGCATGTTGGCGCAAGATCAATATGGGAAT 2610 ||| | |||||||| || |||| | | || | | | || ||||| || ||||| Sbjct 2373 ATTATCATGAATGAAATACTGCAGGCTGTATGTACTCTAGTGCTGGATCAGTACGGGAAC 2432 Query 2611 TATGTTGTTCAGCATGTACTGGAACATGGGAAGCCAGAGGAGCGTTCGTCTATAATTAGT 2670 ||||| ||||||||||| ||| ||||||| || ||| | ||| | || ||||||| | Sbjct 2433 TATGTCGTTCAGCATGTGCTGCAACATGGTAAACCACATGAGAGGTCTACTATAATAACC 2492 Query 2671 AAGCTGATGGGACAGATAGTTCAGATGAGCCAACAAAAATTTGCCTCCAATGTTGTGGAG 2730 ||||| | ||||| || || ||||||| || ||||||||||| || ||||| || ||| Sbjct 2493 AAGCTTACTGGACAAATTGTGAAGATGAGTCAGCAAAAATTTGCTTCAAATGTCGTTGAG 2552 Query 2731 AAGTGCTTAAGCTTCGGAACTCCCGAAGAACGTCAGACCTTGGTAGACGAGATGCTTGGC 2790 |||||||| || | | ||| || |||||||||| | |||| | || |||||||| Sbjct 2553 AAGTGCTTGGTATTTGCGAGTCCAGAGGAACGTCAGATCCTGGTGAATGAAATGCTTGGT 2612 Query 2791 ACAACTGACGAAAATGAACCTCTTCAG 2817 ||||| ||||| || ||||| ||| Sbjct 2613 TTGACTGATGAAAACGAGCCTCTACAG 2639 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 251386405710 Database: N.benthamiana Genome v1.0.1 predicted cDNA Posted date: Mar 21, 2024 4:04 PM Number of letters in database: 82,582,885 Number of sequences in database: 57,140 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5