BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Tomato Genome CDS (ITAG release 4.0) 34,075 sequences; 34,993,605 total letters Query= Untitled_sequence Length=867 Score E Sequences producing significant alignments: (Bits) Value Solyc02g092930.1.1 1572 0.0 Solyc04g078420.1.1 235 3e-61 Solyc04g050080.1.1 71.3 1e-11 >Solyc02g092930.1.1 Length=1086 Score = 1572 bits (851), Expect = 0.0 Identities = 851/851 (100%), Gaps = 0/851 (0%) Strand=Plus/Plus Query 17 ATGGATCGGGTTAAAGGTCCATGGAGCCCTGAAGAAGATGAGCTTTTACAGCAACTTGTT 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGATCGGGTTAAAGGTCCATGGAGCCCTGAAGAAGATGAGCTTTTACAGCAACTTGTT 60 Query 77 CAGAAACATGGCCCGAGAAATTGGTCTCTAATAAGCAAATCGATTCCGGGGAGATCCGGA 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGAAACATGGCCCGAGAAATTGGTCTCTAATAAGCAAATCGATTCCGGGGAGATCCGGA 120 Query 137 AAATCTTGCCGCTTGCGGTGGTGTAATCAGTTATCTCCACAGGTGGAGCATCGGGCTTTT 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAATCTTGCCGCTTGCGGTGGTGTAATCAGTTATCTCCACAGGTGGAGCATCGGGCTTTT 180 Query 197 ACGCCTGAAGAAGATGAGACTATTATTCGGGCTCATGCCCGATTCGGTAACAAATGGGCT 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ACGCCTGAAGAAGATGAGACTATTATTCGGGCTCATGCCCGATTCGGTAACAAATGGGCT 240 Query 257 ACTATAGCCCGACTTCTTAATGGGCGGACTGATAACGCTATTAAGAATCACTGGAACTCT 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ACTATAGCCCGACTTCTTAATGGGCGGACTGATAACGCTATTAAGAATCACTGGAACTCT 300 Query 317 ACCTTGAAGAGGAAGTGTTCATCGCTTAGTGCCGATGAAGGGAACGAACTCGCCGATCAA 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACCTTGAAGAGGAAGTGTTCATCGCTTAGTGCCGATGAAGGGAACGAACTCGCCGATCAA 360 Query 377 CTTTTTGAGAATCAGCAGCCGCCGTTGAAGAGATCTGTTAGTGCCGGATCCGCTATGCCG 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTTTTTGAGAATCAGCAGCCGCCGTTGAAGAGATCTGTTAGTGCCGGATCCGCTATGCCG 420 Query 437 GTTACTGGTTTTCATTTCAGTCCGGGTAGCCCGTCGGGTTCTGATAGCGATTCGAGCCTT 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTTACTGGTTTTCATTTCAGTCCGGGTAGCCCGTCGGGTTCTGATAGCGATTCGAGCCTT 480 Query 497 CATGTTACGTCGTCGTCCCAATCTCAAGTGTTTAAGCCTGTTGCCAGAACCGGCGGCGTA 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CATGTTACGTCGTCGTCCCAATCTCAAGTGTTTAAGCCTGTTGCCAGAACCGGCGGCGTA 540 Query 557 TTTCCGCCGTCGATTGATATTTCATCTCCGCCTGTTGATCCTCCCACTTCTCTAAGCCTT 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTTCCGCCGTCGATTGATATTTCATCTCCGCCTGTTGATCCTCCCACTTCTCTAAGCCTT 600 Query 617 TCGCTTCCTGGTGTTGACTTGGCTGAATCCTCTAATCGTTCGGCCGATTCGACTCAGTCG 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TCGCTTCCTGGTGTTGACTTGGCTGAATCCTCTAATCGTTCGGCCGATTCGACTCAGTCG 660 Query 677 AAAAATCCTTTTCAGTGGCTGCTTCCACCGATGCAGATTCCTCCACCGCCACCACCACCG 736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AAAAATCCTTTTCAGTGGCTGCTTCCACCGATGCAGATTCCTCCACCGCCACCACCACCG 720 Query 737 CCGCCTCCGCTGGCAACAACGGTGCCGTTCGAACGAGTTTCTGCAATTCAACAGTCTCTT 796 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 CCGCCTCCGCTGGCAACAACGGTGCCGTTCGAACGAGTTTCTGCAATTCAACAGTCTCTT 780 Query 797 CAGAACCCTGATTTTGGGCAAAACTCAGGAGGAGAACAGCCAGACAAGGTATTTGTGCCG 856 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 CAGAACCCTGATTTTGGGCAAAACTCAGGAGGAGAACAGCCAGACAAGGTATTTGTGCCG 840 Query 857 TTTAGCCAGGA 867 ||||||||||| Sbjct 841 TTTAGCCAGGA 851 >Solyc04g078420.1.1 Length=987 Score = 235 bits (127), Expect = 3e-61 Identities = 259/324 (80%), Gaps = 4/324 (1%) Strand=Plus/Plus Query 13 AGATATGGATCGGGTTAAAGGTCCATGGAGCCCTGAAGAAGATGAGCTTTTACAGCAACT 72 |||| ||||||| | |||||||||||||| |||||||| || ||| | || ||| || Sbjct 24 AGATTCGGATCGGATCAAAGGTCCATGGAGTCCTGAAGAGGACGAGTTGTTGCAGACGCT 83 Query 73 TGTTCAGAAACATGGCCCGAGAAATTGGTCTCTAATAAGCAAATCGATTCCGGGGAGATC 132 |||| |||||||||| || ||||| ||| || | |||||||||||| | ||||| |||| Sbjct 84 TGTTGAGAAACATGGACCTAGAAACTGGACTTTGATAAGCAAATCGGTGCCGGGTCGATC 143 Query 133 CGGAAAATCTTGCCGCTTGCGGTGGTGTAATCAGTTATCTCCACAGGTGGAGCATCGGGC 192 || ||||| || || | ||||||||||||||| | || || || ||||| ||||| || Sbjct 144 TGGTAAATCCTGTCGTCTCCGGTGGTGTAATCAGCTTTCACCTCAAGTGGAACATCGTGC 203 Query 193 TTTTACGCCTGAAGAAGATGAGACTATTATTCGGGCTCATGCCCGATTCGGTAACAAATG 252 |||||| |||||||||||||| || || || ||||||||||| || ||||| ||||| Sbjct 204 TTTTACTCCTGAAGAAGATGATACGATCATCAGGGCTCATGCCAAGTTTGGTAATAAATG 263 Query 253 GGCTACTATAGCCCGACTTCTTAATGGG-CGGACTGATAACGCTATTAAGAATCACTGGA 311 ||| ||||| ||||| || ||| ||| ||||||||||||||||| ||||| || |||| Sbjct 264 GGCGACTATTGCCCG-TTTGTTATCGGGTCGGACTGATAACGCTATAAAGAACCATTGGA 322 Query 312 ACTCTAC-CTTGAAGAGGAAGTGT 334 ||||||| ||| || | |||||| Sbjct 323 ACTCTACTCTT-AAACGTAAGTGT 345 >Solyc04g050080.1.1 Length=246 Score = 71.3 bits (38), Expect = 1e-11 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 30 AAG-GTCCATGGAGCCCTGAAGAAGATGAGCTTTTACAGCAACTTGTTCAGAAACATGGC 88 ||| ||| ||||| ||| |||| ||||| || | ||| | || || || ||||||| Sbjct 22 AAGCGTCGATGGAATCCTAAAGAGGATGATCTACTGCAGAAGCTAGTAGAGGAACATGGA 81 Query 89 CCGAGAAATTGGTCTCTAATAAGCAAATCGATTCCGGGGAGATCCGGAAAATCTTGCCGC 148 | |||||||||||| || | ||| ||||| ||| ||||| |||||| || | Sbjct 82 GAAAAAAATTGGTCTCTGATTGTCCAATTGATTCTGGGTCGATCCAAAAAATCGTGTAGG 141 Query 149 TTGCGGTGGTGTAATCAG-TTATCTCCACAGGTGGAGCATCGGGCTTTTACGCCTGAAGA 207 || || |||||||||||| ||| ||| || ||||| | ||| ||||||| | ||| || Sbjct 142 TTTCGATGGTGTAATCAGCTTAA-TCCTCAAGTGGATCGTCGACCTTTTACTCTTGATGA 200 Query 208 AGATGAGACTATTATTCGGGCTCATGCCCGATTCGGTAA-CAA 249 |||||| | |||||| | ||||||| ||| ||||| ||| Sbjct 201 AGATGATATTATTATCAAAGATCATGCCAAATTTGGTAATCAA 243 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28747336660 Database: Tomato Genome CDS (ITAG release 4.0) Posted date: Mar 21, 2024 4:17 PM Number of letters in database: 34,993,605 Number of sequences in database: 34,075 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5