Solanum tuberosum mRNA PGSC0003DMT400079187
mRNA details
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| Name | Type | Organism |
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Description
Phyb1
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Location(s)
PGSC_DMv3_219_ch04:56116604..56118819
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GFF source
Cufflinks
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- Mapping depth
- 8.778546
- Source id
- RNASEQ62.6536.1
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400079187 Phyb1
ATTTACTCTAAATTCAAACTTTAAATAGTTTTAACCATATCAATTGGCCATCTGATAATCACCACCTCCTGTTAGCATATGTATAGTTGAAGCTCTGTGAAAGAGTGAGAAGTTGCTACTAACTTTGAGAATCATGTATTTTACTAGATTGGTTATTTCAAGTATACTAATGCAGACTTGAGTGTATTACGTTGTGTAAGAATATTTAAACTAACTATTTTGGCGCTCTAAAAGGAAAATGGTTATAGTGATACAACGACCACTACCTTTACCATAATAATCAGGTTTTGAGATCTGTGACTTTGTGCTAAAATTTGCTTTACACTTCCTTGCATCCGGTATGATTGCATGAAAGCAGATGAGCCACACAATCACTTGTTAAGTGCCTCTGCTGGTAAGAGCTGTTTTAATCTGGCTTTTGACTCTGTGTACTTGAACTTCAAAAACTAATTAAAATTTAGAACACTATTATAAACGTGTTTATCTGGTAATGTTCATTTTCAAAACAGAAAACTATGATAAACTAGCATATTATCTACATGTTTAATTTTTGTTAATTTATATGGATTTTTCTTTAACGAAGTCGGTGAGAATATCTCAATCATGCCCCTCAATTGGTAACACTACTTAGTGATTGTCGAGTGCTGGTAACTTTGCTACTTCTATGTCTTTCTTTCCCTTGTAATGGACTTTGCTGATACTTTTTATTCTTCTTGTTTGTTAGCTTTCTTACTGGATTAATTACTTTTGCAGGAAGTTGTGGATACCTTACCATACAACAAAACTATTGATTTTCTGAGGTTTCTCATAGAACTCAACCAACTTACGGATATCAAGAAACTTGTAAAGCAAAGCGACATAGAGAAGACCTTGCTTTGCAGTCTTTAATGTGGATTAAATCCTAAACCTTTGACGTCCTCATTTTTTAAAGATATAAACAGGGAGATTTCACACACCGTTCAGAAATAATGGCTTCGTTTGGATCTCTTAAGCAGGCTATCTTTGACAGACAAACAAGAAAACAGCAATACCAAGATCACATACGAGGCCTGAATGCTTATGATCGCCACAAGAAATTCCTCAATGATTATGTTGGATTTTATGGAAGAGAGAGATCCACACAAGAAAAGTTGCCTCTTAGAACAGATCAGGATACTCTTAAAGAAGGATACCGATTCATACGAACTGAGGAAGATGATATGAATCCATCTTGGGAGCAAAGGCTGGTGAAGCGCTACTATGACAAGCTATTCAAAGAATATTGTATAGCTGATATGACACACTATAAGAGTGGCAAGATTGGTCTGAGATGGAGGACCGAAAAGGAAGTGACATCTGGTAAAGGGCATTTTGTCTGTGGTAACAAACACTGCAATGAGAGAGATGGTCTAGCAAGTTACGAGGTGAATTTTTCATATGTTGAAGCAGAAGAAAACAAACAAGCCCTGGTGAAATTGGTAGCCTGTGAGAGATGTGCAGAAAAGCTTCTTTATAAAAAGAGGAAAGAGAAGGATCAATCTAAAGAAGACCTGAAAGATAAGCATCGAAGGAAAAGGGGAAGATCTGTGAGTGATGATGAACATAAGGATGATAATTACGAACGAAGGAAAATGGGAAGATCTGTAAGTGATGATGAAAATAAGGATGATAATTACAAACCAAGGAAAAATGAAAGATCTGTAAGTGATGATGATACTAAGGATGATAATTACGAACGAAGGAAAGGAAGGAGTAGAGGGTCAAAGGGCCCAACTTCATCTGATAATCCGGATAATGAGAATATGGATGAGTATCTGGAGGGAATGTTTCCTTGACAGGAGGTTACTGATGTTTTTGTAGAAATTTTGAAGTTTTCATTAAATTTGTTTAGATTGCAACTAGGTATTTTTGTTTGGACAATGGAGAGGAAATTTGGTTGGAAAAGCTCGAGTAAGGTTGTATTTTTGAAAGGCTAGACTGGTTAAGAAATATATGAAGGAACGTGGAAACGCTGGAAGTGGGGAGCTCAAGTATTCTATTGGGTTGTCTGATCATCCATTTAAAATCAAGAAGTGTAGCAAGTGATGTTTCTACTTAGTTTTCAACAGTTTTTTTGCTAATAAGTAGCTCCTCGGAATGTAAATATATGATCCATGTACACTTATGTTGGTTATGAAGTTTACTCCTTTGACCTAATGGATGTCTCATCTTCAATATTGTAGATCAATTTAACGCAC
ATTTACTCTAAATTCAAACTTTAAATAGTTTTAACCATATCAATTGGCCATCTGATAATCACCACCTCCTGTTAGCATATGTATAGTTGAAGCTCTGTGAAAGAGTGAGAAGTTGCTACTAACTTTGAGAATCATGTATTTTACTAGATTGGTTATTTCAAGTATACTAATGCAGACTTGAGTGTATTACGTTGTGTAAGAATATTTAAACTAACTATTTTGGCGCTCTAAAAGGAAAATGGTTATAGTGATACAACGACCACTACCTTTACCATAATAATCAGGTTTTGAGATCTGTGACTTTGTGCTAAAATTTGCTTTACACTTCCTTGCATCCGGTATGATTGCATGAAAGCAGATGAGCCACACAATCACTTGTTAAGTGCCTCTGCTGGTAAGAGCTGTTTTAATCTGGCTTTTGACTCTGTGTACTTGAACTTCAAAAACTAATTAAAATTTAGAACACTATTATAAACGTGTTTATCTGGTAATGTTCATTTTCAAAACAGAAAACTATGATAAACTAGCATATTATCTACATGTTTAATTTTTGTTAATTTATATGGATTTTTCTTTAACGAAGTCGGTGAGAATATCTCAATCATGCCCCTCAATTGGTAACACTACTTAGTGATTGTCGAGTGCTGGTAACTTTGCTACTTCTATGTCTTTCTTTCCCTTGTAATGGACTTTGCTGATACTTTTTATTCTTCTTGTTTGTTAGCTTTCTTACTGGATTAATTACTTTTGCAGGAAGTTGTGGATACCTTACCATACAACAAAACTATTGATTTTCTGAGGTTTCTCATAGAACTCAACCAACTTACGGATATCAAGAAACTTGTAAAGCAAAGCGACATAGAGAAGACCTTGCTTTGCAGTCTTTAATGTGGATTAAATCCTAAACCTTTGACGTCCTCATTTTTTAAAGATATAAACAGGGAGATTTCACACACCGTTCAGAAATAATGGCTTCGTTTGGATCTCTTAAGCAGGCTATCTTTGACAGACAAACAAGAAAACAGCAATACCAAGATCACATACGAGGCCTGAATGCTTATGATCGCCACAAGAAATTCCTCAATGATTATGTTGGATTTTATGGAAGAGAGAGATCCACACAAGAAAAGTTGCCTCTTAGAACAGATCAGGATACTCTTAAAGAAGGATACCGATTCATACGAACTGAGGAAGATGATATGAATCCATCTTGGGAGCAAAGGCTGGTGAAGCGCTACTATGACAAGCTATTCAAAGAATATTGTATAGCTGATATGACACACTATAAGAGTGGCAAGATTGGTCTGAGATGGAGGACCGAAAAGGAAGTGACATCTGGTAAAGGGCATTTTGTCTGTGGTAACAAACACTGCAATGAGAGAGATGGTCTAGCAAGTTACGAGGTGAATTTTTCATATGTTGAAGCAGAAGAAAACAAACAAGCCCTGGTGAAATTGGTAGCCTGTGAGAGATGTGCAGAAAAGCTTCTTTATAAAAAGAGGAAAGAGAAGGATCAATCTAAAGAAGACCTGAAAGATAAGCATCGAAGGAAAAGGGGAAGATCTGTGAGTGATGATGAACATAAGGATGATAATTACGAACGAAGGAAAATGGGAAGATCTGTAAGTGATGATGAAAATAAGGATGATAATTACAAACCAAGGAAAAATGAAAGATCTGTAAGTGATGATGATACTAAGGATGATAATTACGAACGAAGGAAAGGAAGGAGTAGAGGGTCAAAGGGCCCAACTTCATCTGATAATCCGGATAATGAGAATATGGATGAGTATCTGGAGGGAATGTTTCCTTGACAGGAGGTTACTGATGTTTTTGTAGAAATTTTGAAGTTTTCATTAAATTTGTTTAGATTGCAACTAGGTATTTTTGTTTGGACAATGGAGAGGAAATTTGGTTGGAAAAGCTCGAGTAAGGTTGTATTTTTGAAAGGCTAGACTGGTTAAGAAATATATGAAGGAACGTGGAAACGCTGGAAGTGGGGAGCTCAAGTATTCTATTGGGTTGTCTGATCATCCATTTAAAATCAAGAAGTGTAGCAAGTGATGTTTCTACTTAGTTTTCAACAGTTTTTTTGCTAATAAGTAGCTCCTCGGAATGTAAATATATGATCCATGTACACTTATGTTGGTTATGAAGTTTACTCCTTTGACCTAATGGATGTCTCATCTTCAATATTGTAGATCAATTTAACGCAC
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400053680 | PGSC_DMv3_219_ch04:56117572..56118417 | n/a | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400030817 | PGSC_DMv3_219_ch04:56111964..56118826 | 6,863 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400208907 | PGSC_DMv3_219_ch04:56116604..56118819 | 2,216 | + | n/a |
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mRNA details
mRNA details

