Solanum tuberosum mRNA PGSC0003DMT400079186
mRNA details
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| Name | Type | Organism |
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Description
Phyb1
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|
Location(s)
PGSC_DMv3_219_ch04:56111964..56118826
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GFF source
Cufflinks
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- Mapping depth
- 66.246387
- Source id
- RNASEQ62.6536.0
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400079186 Phyb1
ATAGAAACTACCTTCGCCGAAATTTGCCCTTTTTTTTCCGTCTCTCTCAAATTCACTATTGATAATAATTTGATATCTTGAGCTATTTATCTTTGTTCGTCATCTCCGCCTGCTTGATCTTCAGGAAGTTGTGGATACCTTACCATACAACAAAACTATTGATTTTCTGAGGTTTCTCATAGAACTCAACCAACTTACGGATATCAAGAAACTTGTAAAGCAAAGCGACATAGAGAAGACCTTGCTTTGCAGTCTTTAATGTGGATTAAATCCTAAACCTTTGACGTCCTCATTTTTTAAAGATATAAACAGGGAGATTTCACACACCGTTCAGAAATAATGGCTTCGTTTGGATCTCTTAAGCAGGCTATCTTTGACAGACAAACAAGAAAACAGCAATACCAAGATCACATACGAGGCCTGAATGCTTATGATCGCCACAAGAAATTCCTCAATGATTATGTTGGATTTTATGGAAGAGAGAGATCCACACAAGAAAAGTTGCCTCTTAGAACAGATCAGGATACTCTTAAAGAAGGATACCGATTCATACGAACTGAGGAAGATGATATGAATCCATCTTGGGAGCAAAGGCTGGTGAAGCGCTACTATGACAAGCTATTCAAAGAATATTGTATAGCTGATATGACACACTATAAGAGTGGCAAGATTGGTCTGAGATGGAGGACCGAAAAGGAAGTGACATCTGGTAAAGGGCATTTTGTCTGTGGTAACAAACACTGCAATGAGAGAGATGGTCTAGCAAGTTACGAGGTGAATTTTTCATATGTTGAAGCAGAAGAAAACAAACAAGCCCTGGTGAAATTGGTAGCCTGTGAGAGATGTGCAGAAAAGCTTCTTTATAAAAAGAGGAAAGAGAAGGATCAATCTAAAGAAGACCTGAAAGATAAGCATCGAAGGAAAAGGGGAAGATCTGTGAGTGATGATGAACATAAGGATGATAATTACGAACGAAGGAAAATGGGAAGATCTGTAAGTGATGATGAAAATAAGGATGATAATTACAAACCAAGGAAAAATGAAAGATCTGTAAGTGATGATGATACTAAGGATGATAATTACGAACGAAGGAAAGGAAGGAGTAGAGGGTCAAAGGGCCCAACTTCATCTGATAATCCGGATAATGAGAATATGGATGAGTATCTGGAGGGAATGTTTCCTTGACAGGAGGTTACTGATGTTTTTGTAGAAATTTTGAAGTTTTCATTAAATTTGTTTAGATTGCAACTAGGTATTTTTGTTTGGACAATGGAGAGGAAATTTGGTTGGAAAAGCTCGAGTAAGGTTGTATTTTTGAAAGGCTAGACTGGTTAAGAAATATATGAAGGAACGTGGAAACGCTGGAAGTGGGGAGCTCAAGTATTCTATTGGGTTGTCTGATCATCCATTTAAAATCAAGAAGTGTAGCAAGTGATGTTTCTACTTAGTTTTCAACAGTTTTTTTGCTAATAAGTAGCTCCTCGGAATGTAAATATATGATCCATGTACACTTATGTTGGTTATGAAGTTTACTCCTTTGACCTAATGGATGTCTCATCTTCAATATTGTAGATCAATTTAACGCACAAGTTCA
ATAGAAACTACCTTCGCCGAAATTTGCCCTTTTTTTTCCGTCTCTCTCAAATTCACTATTGATAATAATTTGATATCTTGAGCTATTTATCTTTGTTCGTCATCTCCGCCTGCTTGATCTTCAGGAAGTTGTGGATACCTTACCATACAACAAAACTATTGATTTTCTGAGGTTTCTCATAGAACTCAACCAACTTACGGATATCAAGAAACTTGTAAAGCAAAGCGACATAGAGAAGACCTTGCTTTGCAGTCTTTAATGTGGATTAAATCCTAAACCTTTGACGTCCTCATTTTTTAAAGATATAAACAGGGAGATTTCACACACCGTTCAGAAATAATGGCTTCGTTTGGATCTCTTAAGCAGGCTATCTTTGACAGACAAACAAGAAAACAGCAATACCAAGATCACATACGAGGCCTGAATGCTTATGATCGCCACAAGAAATTCCTCAATGATTATGTTGGATTTTATGGAAGAGAGAGATCCACACAAGAAAAGTTGCCTCTTAGAACAGATCAGGATACTCTTAAAGAAGGATACCGATTCATACGAACTGAGGAAGATGATATGAATCCATCTTGGGAGCAAAGGCTGGTGAAGCGCTACTATGACAAGCTATTCAAAGAATATTGTATAGCTGATATGACACACTATAAGAGTGGCAAGATTGGTCTGAGATGGAGGACCGAAAAGGAAGTGACATCTGGTAAAGGGCATTTTGTCTGTGGTAACAAACACTGCAATGAGAGAGATGGTCTAGCAAGTTACGAGGTGAATTTTTCATATGTTGAAGCAGAAGAAAACAAACAAGCCCTGGTGAAATTGGTAGCCTGTGAGAGATGTGCAGAAAAGCTTCTTTATAAAAAGAGGAAAGAGAAGGATCAATCTAAAGAAGACCTGAAAGATAAGCATCGAAGGAAAAGGGGAAGATCTGTGAGTGATGATGAACATAAGGATGATAATTACGAACGAAGGAAAATGGGAAGATCTGTAAGTGATGATGAAAATAAGGATGATAATTACAAACCAAGGAAAAATGAAAGATCTGTAAGTGATGATGATACTAAGGATGATAATTACGAACGAAGGAAAGGAAGGAGTAGAGGGTCAAAGGGCCCAACTTCATCTGATAATCCGGATAATGAGAATATGGATGAGTATCTGGAGGGAATGTTTCCTTGACAGGAGGTTACTGATGTTTTTGTAGAAATTTTGAAGTTTTCATTAAATTTGTTTAGATTGCAACTAGGTATTTTTGTTTGGACAATGGAGAGGAAATTTGGTTGGAAAAGCTCGAGTAAGGTTGTATTTTTGAAAGGCTAGACTGGTTAAGAAATATATGAAGGAACGTGGAAACGCTGGAAGTGGGGAGCTCAAGTATTCTATTGGGTTGTCTGATCATCCATTTAAAATCAAGAAGTGTAGCAAGTGATGTTTCTACTTAGTTTTCAACAGTTTTTTTGCTAATAAGTAGCTCCTCGGAATGTAAATATATGATCCATGTACACTTATGTTGGTTATGAAGTTTACTCCTTTGACCTAATGGATGTCTCATCTTCAATATTGTAGATCAATTTAACGCACAAGTTCA
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400053679 | PGSC_DMv3_219_ch04:56117572..56118417 | n/a | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400030817 | PGSC_DMv3_219_ch04:56111964..56118826 | 6,863 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400208906 | PGSC_DMv3_219_ch04:56111964..56112087 | 124 | + | n/a |
| exon | PGSC0003DME400208908 | PGSC_DMv3_219_ch04:56117357..56118826 | 1,470 | + | n/a |
| intron | PGSC0003DMI400132479 | PGSC_DMv3_219_ch04:56112088..56117356 | n/a | + | n/a |
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mRNA details
mRNA details

