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Solanum lycopersicum mRNA Solyc12g042070.1.1

mRNA details  
Name
Solyc12g042070.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g042070.1.1
Length
2,487
  
Description
Auxin response factor 2 (AHRD V1 ***- Q2LAJ3_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch12:40782124..40786819
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0046983
Length
4696
Nb exon
14
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g042070.1.1 Auxin response factor 2 (AHRD V1 ***- Q2LAJ3_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGGCTACTTCTGAGAATTGCCGGAACGCTGCCGGCGCCGGAAAAGTTGATGCTGAGAAAGCGTTGTACACGGAGCTATGGCGAGCATGTGCAGGTCCGCTTGTGACAGTGCCATGTGAAGGCGAGCTGGTGTTCTATTTCCCACAAGGTCATATTGAACAGGTTGAAGCATCAACAAACCAAGCTTCAGACCAGCAGATGCCAGTATATAATCTTCCTTCTAAGATCCTCTGTCGTGTGATTAACGTCCTGCTGAAGGCTGAACCCGATACAGATGAGGTGTATGCACAAGTGACTTTGTTGCCAGAACCAAATCAAGATGAGAATGTGGTATCAAAGGAACCGATGCCCTCTCCGCCACCACGATTCCATGTGCACTCTTTTTGTAAGACATTAACAGCCTCTGATACCAGCACTCATGGAGGATTTTCTGTCTTGAGACGGCATGCTGATGAATGCCTCCCGCCTCTGGATATGTCTCGGCAGCCTCCAACACAGGAGTTGGTGGCCAAAGATTTGCATGCAAATGAGTGGCGCTTCAGGCACATATTCCGGGGCCAGCCTAGGAGGCACCTTCTTCAGAGTGGTTGGAGTGTCTTTGTTAGTTCGAAAAGGCTTGTTGCAGGGGATGCATTCATATTTCTTAGAGGTGAGAATGGGGAGCTTCGTGTTGGAGTCCGACGTGCCATGAGACAGCAGGGTAATGCTCCATCATCAGTGATATCCAGTCATAGCATGCATCTTGGTGTCCTTGCTACAGCTTGGCATGCTATTCAGACGAAAACACTGTTCACAGTATATTATAAACCAAGGACGAGCCCTGCTGACTTTATAGTTCCATATGATCAGTATATGGAGTCTCTGAAAAACAATTACTCCATCGGGATGAGGTTTAAAATGAGGTTTGAAGGTGAAGAAGCTCCAGAACAGAGGTTTACTGGAACTATAGTTGGCATTGAAAATGCTGACCTCAAAAGGTGGCCTGAGTCAAAATGGAGATGCCTGAAGGTTCGATGGGATGAAACTTCTGCTATTCCTAGGCCAGACCGAGTTTCACCCTGGAAAGTAGAGCCAGCTCTTAGCCCTCCTGCACTTAATCCACTTCCAATACCAAGGCAGAAAAGGCCGCGATCAAATGTTCTGCCCTCGTCTCCTGATTCTTCTGTACTTACTAGGGAAGGTTCATCCAAAGTAGTTGTAGACACTTCACAAGCCAGTGGGTTTTCAAGAGTTTTGCAAGGTCAAGAAATATCAACCTTGAGAGGCAATTTTGTAGAAAATAACGAGTCGGACTCTTCTGAGAAGCCACCTATATGGCAACCATTACTGGATGACGAGAAGGCTGATGTTCATTCTGCGTCAAGGAAATGTATATCAGATAAACGGCTTCCTTTAGGGAGGCCTGAATCATCTTTTACAGATCTTTTATCAGGTTTTGGGGGGCAATCTAGTTCATCTCATGGATTCCATTCACCCACTGGGGGCCAAACAGCACCTGCTAGCTGGGTTAAGCGACAAGCTCTGGATAAGGAAACTGATTTCAGCTTACTGGCAAAACAATGGTCTCTAGTGTCTTCTGGTCTCTCACTTAATCTGATGGAATCAGGATTGAAGGGTGCAGATACTCTGTATCAAATGCGGGGAACATCTCGACTCAATTGTTTTAACGAGTATCCAACCTTCCCTGGTCATAGACCTGACAATCAGCAGGGAAATTGGTTAATGCCCCCGTCCGTGCTGCCTTATATTCAGATGTCCGCTCATTCTGGAGAAATTATGCCTAAACCCATGGCTTCACCACAGCCCGAAGCCATGAAACCCAAAGAAGGGAACTGCAAACTATTTGGCATTCCCCTTGTAAGTAAATGTGCCACCATAGATCCTGTCATGTTGCGGAAAAATTCCCCGATTCACTCAACAAGTAACATGCACTTTGGTATACATCCACATCAATTCCCTATAATTGAATCTGATCAAAGGTCTGAGCAATCAAAGGGATCAAAGCTACCAGATGATGGCTTCATAGTTCATGATCAGGAAGAACAATTCCAAACCTCTCATCCTGGTACTCGAGATAGAGAGGGCAAAGGCCTTGTTCATTCAACAAGGAGTTGCACCAAGGTTCATAAACAGGGTACAGCCCTTGGAAGGTCTGTTGATCTTGCAAAGTTCAACAACTATGAAGAATTGATAGCTGAACTGGATCACATTTTTGATTTTAATGGTGAGCTCAAGGCTCGTAACAAGAACTGGCTGGTTGTATATACTGATGATGAGGGTGACATGATGCTTGTTGGAGATGATCCATGGGAATTTTGTGGTATGGTTCGGAAGATTTTTATCTACACGAAAGATGAGGTGCAGCGGATGAACCCTGGGACTCTCAATTCAAAAGGCGAGGACAATTCTTCTGTTGCAGAAGGCTCTGATGCTAAAGAAGTGAAGAATCTACAGCTTCACATTGATTCCAGTCCGGAAGATTCTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g042070.1.1SL2.50ch12:40782123..40786819829+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g042070.1SL2.50ch12:40782124..407868194,696+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g042070.1.1.1SL2.50ch12:40782124..4078216946+n/a
exonexon:Solyc12g042070.1.1.10SL2.50ch12:40784859..4078493476+1
exonexon:Solyc12g042070.1.1.11SL2.50ch12:40785030..40785201172+n/a
exonexon:Solyc12g042070.1.1.12SL2.50ch12:40785302..40786242941+2
exonexon:Solyc12g042070.1.1.13SL2.50ch12:40786323..40786510188+n/a
exonexon:Solyc12g042070.1.1.14SL2.50ch12:40786642..40786819178+1
exonexon:Solyc12g042070.1.1.2SL2.50ch12:40782319..40782434116+2
exonexon:Solyc12g042070.1.1.3SL2.50ch12:40782603..4078269896+n/a
exonexon:Solyc12g042070.1.1.4SL2.50ch12:40782828..4078288457+n/a
exonexon:Solyc12g042070.1.1.5SL2.50ch12:40783010..40783165156+n/a
exonexon:Solyc12g042070.1.1.6SL2.50ch12:40783252..4078333685+n/a
exonexon:Solyc12g042070.1.1.7SL2.50ch12:40784053..4078414391+2
exonexon:Solyc12g042070.1.1.8SL2.50ch12:40784232..40784396165+1
exonexon:Solyc12g042070.1.1.9SL2.50ch12:40784539..40784658120+1
intronintron:Solyc12g042070.1.1.10SL2.50ch12:40784659..40784858n/a+n/a
intronintron:Solyc12g042070.1.1.11SL2.50ch12:40784935..40785029n/a+n/a
intronintron:Solyc12g042070.1.1.12SL2.50ch12:40785202..40785301n/a+n/a
intronintron:Solyc12g042070.1.1.13SL2.50ch12:40786243..40786322n/a+n/a
intronintron:Solyc12g042070.1.1.14SL2.50ch12:40786511..40786641n/a+n/a
intronintron:Solyc12g042070.1.1.2SL2.50ch12:40782170..40782318n/a+n/a
intronintron:Solyc12g042070.1.1.3SL2.50ch12:40782435..40782602n/a+n/a
intronintron:Solyc12g042070.1.1.4SL2.50ch12:40782699..40782827n/a+n/a
intronintron:Solyc12g042070.1.1.5SL2.50ch12:40782885..40783009n/a+n/a
intronintron:Solyc12g042070.1.1.6SL2.50ch12:40783166..40783251n/a+n/a
intronintron:Solyc12g042070.1.1.7SL2.50ch12:40783337..40784052n/a+n/a
intronintron:Solyc12g042070.1.1.8SL2.50ch12:40784144..40784231n/a+n/a
intronintron:Solyc12g042070.1.1.9SL2.50ch12:40784397..40784538n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F18003807%2Fdetails feature 18003807
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