Solanum lycopersicum mRNA Solyc10g055720.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc10g055720.1.1
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Length
1,692
|
|
Description
Kinase family protein (AHRD V1 ***- D7MEZ1_ARALY); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like
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|
Location(s)
SL2.50ch10:57247560..57256957
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0008152
- GO:0006468
- Length
- 9398
- Nb exon
- 16
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc10g055720.1.1 Kinase family protein (AHRD V1 ***- D7MEZ1_ARALY); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like
ATGGTGATGGAGGATACGGAGAGTTGTGGTAGTAGAGTGGTGGATTCAGCGCCGGCGAACAGCCGGCAACACAGAAAAAAGTTGGAGGTATATAATGAGGTTCTTCGTAGACTCAAGGAATCTGATAACGATGAGGCTCAACAGCCTGGGTTTGAGGATGAGCTTTGGTCTCACTTTAATCGTCTTCCTACTAGGTATGCCTTAGATGTGAATGTAAGTGCTGAAGATGTACTCAGGCACAAGCGGTTACTACATCTCGCCCATGATCCAGCTAATAGACCTGCCTTTGATGTCCGGCTAGTGCAGGTTACTCAAGCTCCTGATGGAAACTCAGCAGATCCTGTTCCGTTAAACTCTGCAACCAAGGAAATTAGCCGAAGTGTCTTTCCTCTACCTGCCTTTGGTTCTTCCCCTAATCTCGAAGCACTTGCTCTTGAAGCTAGCAAATCTGAAGTTCAAGATGAGGATGTTACAGTCACTTGTGGAAATTTGTTACGGCCAATGCATGAAATTACGTTTTCAACTGATGACAAGCCCAAGCTCCTCAGCCAGTTAACTTCATTACTAGCCGAGCTTGGGCTGAACATCCAGGAAGCACATGTATTTTCCTCAATTGATGGCTACTCCCTAGATGTTTTCGTTGTTGATGGTTGGCCCTATGAGGAAATTGAGCAGCTTCGAATGGCACTGAAAAGGGAAATTCTGAAGATTGAGAAGTCTTCACCTAGTCAAAGTCCATCAGAATCTTTTAGAAAGGAGGACAAAACACTCATCAAATGTGAACTTGATCCTGTGACAATACCTTGTGATGGTGTTGATGTCTGGGAAATTGATCATCAGCTTCTCAACTTTGGCAACAAGATTGCTTCTGGTTCATATGGTGACTTATACAAAGGTACATACTGCAGTCAGGAAGTAGCTATCAAGATCCTCAAATCTGAGCGCTTGAACACAGAATTGCAAAAGGAGTTTGCCCAAGAAGTTTATATCATGAGAAAAGTTCGTCATAAAAATGTTGTTCGATTCATAGGGGCATGTACCAGGCCTCCAAACTTGTGTATAGTAACAGAGTACATGTCTGGAGGAAGCGTATATGACTACTTACACAAACAGAAGGGCAGTTTCAAGTTCCCTACTTTGCTCAAAGTAGCAATTGATGTGTCAAAAGGGATGAATTACCTGCACCAGAATAACATCATACATAGAGACTTGAAGGCTGCCAATCTACTGATGGATGAAAATGAAGTTGTTAAAGTGGCTGATTTTGGTGTTGCCAGAGTGAAGGCACAAACTGGTGTCATGACGGCAGAGACAGGGACTTATAGATGGATGGCCCCTGAGATTATAGAACACAAGCCATATGATCACAAAGCAGATATTTTCAGTTTTGGGGTTCTGTTATGGGAATTAATGACCGGAAAGCTTCCATATGAGTACTTGACCCCACTACAAGCTGCCATTGGAGTTGTCCAGAAGGGGTTGCGACCTGCTATTCCCAAACATACTCATCCAAAAATTGCCGAGTTACTGGAGAAATGCTGGCAACGAGATCCAACATCAAGGCCTGATTTTCCTGAGATAATAGAGACATTGCAGCAAGTAGCAAAAGAGGTTGCAGATGAAGAAGATGATCGCCGCAAGGAGAAGCCATCCGGAGGATTCTTTTCAGTCCTCAGACGTGGACACCACTAA
ATGGTGATGGAGGATACGGAGAGTTGTGGTAGTAGAGTGGTGGATTCAGCGCCGGCGAACAGCCGGCAACACAGAAAAAAGTTGGAGGTATATAATGAGGTTCTTCGTAGACTCAAGGAATCTGATAACGATGAGGCTCAACAGCCTGGGTTTGAGGATGAGCTTTGGTCTCACTTTAATCGTCTTCCTACTAGGTATGCCTTAGATGTGAATGTAAGTGCTGAAGATGTACTCAGGCACAAGCGGTTACTACATCTCGCCCATGATCCAGCTAATAGACCTGCCTTTGATGTCCGGCTAGTGCAGGTTACTCAAGCTCCTGATGGAAACTCAGCAGATCCTGTTCCGTTAAACTCTGCAACCAAGGAAATTAGCCGAAGTGTCTTTCCTCTACCTGCCTTTGGTTCTTCCCCTAATCTCGAAGCACTTGCTCTTGAAGCTAGCAAATCTGAAGTTCAAGATGAGGATGTTACAGTCACTTGTGGAAATTTGTTACGGCCAATGCATGAAATTACGTTTTCAACTGATGACAAGCCCAAGCTCCTCAGCCAGTTAACTTCATTACTAGCCGAGCTTGGGCTGAACATCCAGGAAGCACATGTATTTTCCTCAATTGATGGCTACTCCCTAGATGTTTTCGTTGTTGATGGTTGGCCCTATGAGGAAATTGAGCAGCTTCGAATGGCACTGAAAAGGGAAATTCTGAAGATTGAGAAGTCTTCACCTAGTCAAAGTCCATCAGAATCTTTTAGAAAGGAGGACAAAACACTCATCAAATGTGAACTTGATCCTGTGACAATACCTTGTGATGGTGTTGATGTCTGGGAAATTGATCATCAGCTTCTCAACTTTGGCAACAAGATTGCTTCTGGTTCATATGGTGACTTATACAAAGGTACATACTGCAGTCAGGAAGTAGCTATCAAGATCCTCAAATCTGAGCGCTTGAACACAGAATTGCAAAAGGAGTTTGCCCAAGAAGTTTATATCATGAGAAAAGTTCGTCATAAAAATGTTGTTCGATTCATAGGGGCATGTACCAGGCCTCCAAACTTGTGTATAGTAACAGAGTACATGTCTGGAGGAAGCGTATATGACTACTTACACAAACAGAAGGGCAGTTTCAAGTTCCCTACTTTGCTCAAAGTAGCAATTGATGTGTCAAAAGGGATGAATTACCTGCACCAGAATAACATCATACATAGAGACTTGAAGGCTGCCAATCTACTGATGGATGAAAATGAAGTTGTTAAAGTGGCTGATTTTGGTGTTGCCAGAGTGAAGGCACAAACTGGTGTCATGACGGCAGAGACAGGGACTTATAGATGGATGGCCCCTGAGATTATAGAACACAAGCCATATGATCACAAAGCAGATATTTTCAGTTTTGGGGTTCTGTTATGGGAATTAATGACCGGAAAGCTTCCATATGAGTACTTGACCCCACTACAAGCTGCCATTGGAGTTGTCCAGAAGGGGTTGCGACCTGCTATTCCCAAACATACTCATCCAAAAATTGCCGAGTTACTGGAGAAATGCTGGCAACGAGATCCAACATCAAGGCCTGATTTTCCTGAGATAATAGAGACATTGCAGCAAGTAGCAAAAGAGGTTGCAGATGAAGAAGATGATCGCCGCAAGGAGAAGCCATCCGGAGGATTCTTTTCAGTCCTCAGACGTGGACACCACTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc10g055720.1.1 | SL2.50ch10:57247559..57256957 | 564 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc10g055720.1 | SL2.50ch10:57247560..57256957 | 9,398 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc10g055720.1.1.1 | SL2.50ch10:57256764..57256957 | 194 | - | n/a |
| exon | exon:Solyc10g055720.1.1.10 | SL2.50ch10:57251828..57251901 | 74 | - | 1 |
| exon | exon:Solyc10g055720.1.1.11 | SL2.50ch10:57251535..57251710 | 176 | - | 2 |
| exon | exon:Solyc10g055720.1.1.12 | SL2.50ch10:57249929..57250024 | 96 | - | n/a |
| exon | exon:Solyc10g055720.1.1.13 | SL2.50ch10:57248872..57248952 | 81 | - | n/a |
| exon | exon:Solyc10g055720.1.1.14 | SL2.50ch10:57248736..57248789 | 54 | - | n/a |
| exon | exon:Solyc10g055720.1.1.15 | SL2.50ch10:57248477..57248611 | 135 | - | n/a |
| exon | exon:Solyc10g055720.1.1.16 | SL2.50ch10:57247560..57247640 | 81 | - | n/a |
| exon | exon:Solyc10g055720.1.1.2 | SL2.50ch10:57256316..57256427 | 112 | - | 1 |
| exon | exon:Solyc10g055720.1.1.3 | SL2.50ch10:57255796..57255869 | 74 | - | n/a |
| exon | exon:Solyc10g055720.1.1.4 | SL2.50ch10:57255534..57255650 | 117 | - | 1 |
| exon | exon:Solyc10g055720.1.1.5 | SL2.50ch10:57255165..57255219 | 55 | - | 1 |
| exon | exon:Solyc10g055720.1.1.6 | SL2.50ch10:57254579..57254689 | 111 | - | n/a |
| exon | exon:Solyc10g055720.1.1.7 | SL2.50ch10:57253296..57253346 | 51 | - | n/a |
| exon | exon:Solyc10g055720.1.1.8 | SL2.50ch10:57252725..57252897 | 173 | - | n/a |
| exon | exon:Solyc10g055720.1.1.9 | SL2.50ch10:57252537..57252644 | 108 | - | 1 |
| intron | intron:Solyc10g055720.1.1.10 | SL2.50ch10:57251902..57252536 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.11 | SL2.50ch10:57251711..57251827 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.12 | SL2.50ch10:57250025..57251534 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.13 | SL2.50ch10:57248953..57249928 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.14 | SL2.50ch10:57248790..57248871 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.15 | SL2.50ch10:57248612..57248735 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.16 | SL2.50ch10:57247641..57248476 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.2 | SL2.50ch10:57256428..57256763 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.3 | SL2.50ch10:57255870..57256315 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.4 | SL2.50ch10:57255651..57255795 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.5 | SL2.50ch10:57255220..57255533 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.6 | SL2.50ch10:57254690..57255164 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.7 | SL2.50ch10:57253347..57254578 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.8 | SL2.50ch10:57252898..57253295 | n/a | - | n/a |
| intron | intron:Solyc10g055720.1.1.9 | SL2.50ch10:57252645..57252724 | n/a | - | n/a |
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