Solanum lycopersicum mRNA Solyc10g044670.1.1

mRNA details  
Name
Solyc10g044670.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc10g044670.1.1
Length
3,372
  
Description
Phytochrome A
Location(s)
SL2.50ch10:27379801..27384675
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005515
  • GO:0016020
  • GO:0018298
  • GO:0005524
  • GO:0000160
  • GO:0007165
  • GO:0006355
  • GO:0018106
  • GO:0045449
Length
4875
Nb exon
4
Sifter term
  • GO:0042802
  • GO:0009883
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g044670.1.1 Phytochrome A

ATGTCGTCTTCAAGACCTAGCCAATCTTCCACCACTTCATCAAGATCAAAGCACAGTGCTAGGATCGTTGCACAGACCTCTATAGATGCAAAGCTGCATGCAGACTTTGAGGAGTCAGGTGATTCCTTTGACTATTCAAGCTCAGTGAGGGTTACAAGTGTCGCTGGAGATGAGGAAAAACCAAAGTCAGACAAAGTTACCACCGCCTACCTTCATCAGATCCAAAAGGGCAAGTTTATCCAGCCATTTGGTTGTCTGTTAGCCCTGGATGAGAAAACATTAAAGGTCATAGCATTCAGTGAGAATGCCCCTGAAATGCTGACCATGGTTAGCCATGCTGTTCCAAGTGTTGGTGAGCATCCAGTTCTTGGCATCGGGACTGATATCAGAACGATCTTCACTGGTCCTAGTGGCGCAGCATTGCAGAAAGCCTTGGGGTTTGGGGAGGTTTCTCTGTTAAATCCTGTCCTTGTTCACTGTAAAAATTCTGGAAAGCCATTTTATGCAATTGTTCATAGGGTTACAGGTAGCTTAATCCTTGATTTTGAGCCTGTGAAGCCCTATGAAGTACCCATGACTGCTGCAGGGGCCCTGCAGTCATATAAACTAGCAGCCAAAGCCATTACTCGCTTGCAGTCCTTGCCCAGTGGCAGTATGGAAAGACTCTGTGACACAATGGTTCAGGAGGTTTTTGAACTCACAGGTTATGACAGGGTGATGGGATATAAGTTTCACGAGGATGATCATGGAGAGGTGGTGTCTGAGATCACAAAGCCTGGCCTCGAGCCTTACCTTGGTTTACATTATCCTGCTACAGATATTCCACAGGCTGCACGGTTTTTGTTTATGAAGAATAAGGTCCGAATGATTTGTGATTGCCGAGCAAAGCATGTGAAGGTAGTCCAAGATGAGAAGCTTCCATTTGATTTAACATTGTGCGGCTCTACTCTTAGGGCCCCTCACTACTGCCATTTACAGTATATGGAGAACATGAATTCAATTGCATCACTTGTAATGGCAGTTGTGGTCAATGACGGGGATGAAGAAGGAGAAAGCTCTGATTCTTCACAATCTCAAAAAAGAAAAAGGCTATGGGGCCTGGTTGTTTGCCACAACACGACCCCAAGGTTCGTTCCCTTTCCACTGAGGTATGCATGTGAGTTTCTTGCACAAGTCTTTGCCATACACGTCAACAAGGAACTGGAATTGGAAAATCAATTCCTTGAGAAAAATATTCTGCGTACTCAGACTCTCTTGTGTGATATGCTGATGCGAGATGCTCCCCTAGGTATCGTGTCACAGAGCCCCAACATTATGGATCTTGTCAAATGTGATGGTGCGGCTTTGCTCTATAAGAATAAGATACATCGATTAGGAATGAACCCAAGTGACTTTCAGCTGCAGGATATAGTATCATGGCTTTGTGAGTATCATACAGATTCCACAGGCTTGAGTACGGATAGCTTGTATGATGCTGGTTTTCCTGGGGCTCTTGCTCTTGGTGATGCAGTCTGTGGTATGGCAGCTGTGAGAATATCTGATAAGGACTGGCTGTTCTGGTTCAGGTCACACACTGCTGCTGAAGTTAGATGGGGTGGTGCAAAGCATGAACCTGGTGAGAAGGATGATGGCAGGAAAATGCATCCTAGGTCATCATTCAAAGCATTCCTGGAAGTTGTCAAGACAAGGAGTATACCCTGGAAGGATTATGAGATGGATGCAATCCACTCTTTGCAGCTCATACTAAGAAATGCTTTCAAGGATGCTGAGGTTGTGAATTCAAATACCAATTCCATCTATAAGAAGCTTAATGATCTAAAGATTGACGGAATGCAGGAACTAGAATCAGTGACTGCTGAAATGGTCCGCTTAATTGAAACAGCTTTAGTTCCTATATTAGCAGTTGATGTTGATGGGCAGGTTAATGGATGGAACACAAAAATAGCTGAATTAACTGGTCTTCCTGTTGATGAAGCAATTGGGAAACATCTTCTCACTCTCGTGGAGGATTCATCAGTTGATACCGTGAATAAGATGTTGGAATTAGCATTGCAGGGGAAAGAGGAAAAAAATGTAGAGTTTGAAATAAAAACACATGGGCCGTCAAGAGATTCTAGTCCAATCAGCTTAATCGTGAATGCATGTGCAAGCAAAGATGTTCGGGATAATGTTGTGGGTGTGTGTTTTATGGCTCATGATATAACTGGACAAAAAAGCATCATGGACAAGTTCACCCGAATCGAAGGTGACTATAGAGCGATTATCCAAAATCCTCACCCATTGATCCCACCAATATTTGGCACTGATCAATTTGGCTGGTGTTCTGAGTGGAACACTGCAATGACCAAGTTAACTGGATGGCGGCGTGATGATGTTATGGATAAAATGCTGTTAGGGGAGGTTTTTGGGACACAGGCAGCTTGCTGCCGTCTCAAGAATCAAGAAGCGTTTGTAAATTTCGGAGTTGTACTAAACAATGCTATCACTGGTCAAGAATCTGAGAAGATTCCTTTTGGTTTCTTTGCACGTTACGGGAAATATGTGGAGTGCTTACTCTGTGTGAGCAAAAGGTTAGATAAAGAGGGTGCAGTCACGGGACTCTTTTGTTTCCTGCAACTTGCAAGCCATGAGTTGCAACAAGCTCTTTATGTTCAACGATTATCAGAACAAACTGCGTTGAAAAGATTGAAAGTATTAGCTTACATAAGGAGGCAAATTAGGAATCCTCTTTCTGGGATTATATTCTCTCGGAAGATGCTAGAGGGGACTAGCTTGGGCGAAGAGCAGAAAAATATACTGCATACAAGTGCACAGTGTCAGCGTCAGCTCAACAAAATTCTTGATGATACAGATCTTGATAGCATCATAGATGGTTATTTGGATCTGGAGATGCTCGAGTTTAAGCTGCATGAAGTATTGGTAGCATCTATAAGTCAAGTCATGATGAAGAGCAACGGAAAGAATATAATGATCTCGAATGACATGGTTGAAGATCTTCTTAATGAAACTTTATACGGAGATAGTCCGAGGCTTCAACAAGTCCTTGCTAACTTTTTGTTAGTATCTGTGAACGCTACACCAAGTGGCGGCCAGCTTAGTATTTCAGGCAGGCTAACAAAAGATCGTATAGGAGAATCTGTTCAGCTTGCTCTCTTGGAATTCAGGATAAGACATACAGGGGGTGGAGTGCCAGAAGAATTGCTTGGCCAAATGTTTGGTAGTGAAGCCGATGCATCTGAAGAAGGGATCAGCTTACTTGTCAGCAGAAAACTGGTCAAGCTGATGAATGGGGAAGTTCAGTATCTAAGAGAGGCTGGGCAATCAACTTTCATTATATCCGTTGAACTCGCAGTGGCTACCAACTCAAGCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g044670.1.1SL2.50ch10:27379800..273846751,124+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g044670.1SL2.50ch10:27379801..273846754,875+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g044670.1.1.1SL2.50ch10:27379801..273818562,056+n/a
exonexon:Solyc10g044670.1.1.2SL2.50ch10:27382129..27382945817+2
exonexon:Solyc10g044670.1.1.3SL2.50ch10:27383273..27383563291+1
exonexon:Solyc10g044670.1.1.4SL2.50ch10:27384468..27384675208+1
intronintron:Solyc10g044670.1.1.1SL2.50ch10:27381857..27382128n/a+n/a
intronintron:Solyc10g044670.1.1.2SL2.50ch10:27382946..27383272n/a+n/a
intronintron:Solyc10g044670.1.1.3SL2.50ch10:27383564..27384467n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17951099%2Fdetails feature 17951099
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