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Solanum lycopersicum mRNA Solyc10g009070.2.1

mRNA details  
Name
Solyc10g009070.2.1
Type
mRNA
Length
2,821
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 **** Q8JGR2_DANRE); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch10:3093051..3105113
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005634
  • GO:0005524
Length
12063
Nb exon
11
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc10g009070.2.1 ATP-dependent RNA helicase (AHRD V1 **** Q8JGR2_DANRE); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TACAAAACCCAGGGAATTAGGTCCAAAAACCCTCTGTTCATTCTTTTCTTCAGTGAGCCACCAAAACTTTCTTCGCTTCCAACTCTCCAATGGCGATTCTGGTTAGCTCCAAAGCGGAGCTTAAACGTAGAGAGAAGCAGAAGAAGAAGGCAAAATCAGGAGGATTTGAGTCATTAGGTTTAAGCTCTAATATCTTCAGAGGAATCAAACGAAAAGGTTATAGAGTTCCTACGCCTATTCAGCGTAAGACAATGCCACTTATACTCTCTGGATTCGATGTTGTTGCTATGGCCCGTACTGGTTCTGGTAAAACGGCGGCTTTCCTTGTGCCTATGCTTGAGAAATTGAAGCAGCATGTGCCTCAAGCTGGTGTTAGAGCTCTAATTCTTTCTCCAACTAGGGATTTGGCGCTTCAAACGCTTAAGTTTACCAAAGAACTTGGCCGATTCACAGATATTAGGGTTAGTTTGTTGGTTGGTGGTGATAGTATGGAAAGCCAGTTTGAAGAATTGGCACAAAGTCCTGATATTATAATTGCAACTCCTGGTCGGCTCATGCACCATTTATCTGAGGTTGATGATATGTCACTGCGCACTGTGGAATATGTTGTTTTTGATGAAGCTGATTGTTTGTTTAGCATGGGTTTTGCTGAGCAATTGCATAGAATTCTCACCCATCTAGGTGAGAACCGCCAGACTCTGCTTTTTAGTGCAACTTTACCCAGTGCCCTTGCTGAATTTGCTAAGGCTGGGCTTCGAGACCCTCAGCTTGTGAGGCTTGATTTGGATACAAAGATAAGTCCAGACTTGAAGGTTGCATTTTTCACTGTAAGACAGGAGGAGAAGCATGCTGCACTTCTGTATCTGATTCGTGAACAAATAACTTCTGATCAGCAGACTATAGTTTTTGTTTCCACCAAGTATCACGTTGAGTTCCTCAACATTCTTTTAAGAGAAGAGGGCATTGAAGCTTCTGTTTGTTATGGTGATATGGATCACGATGCTCGCAAAATTCATGTTTCTAGATTTAGAGCAAGAAAAACCATGGTGCTCATTGTGACGGATGTGGCTGCTAGAGGAATTGATATTCCACTGCTTGATAATGTTATCAACTTTGATTTTCCTACCAAACCTAAACTTTTTGTTCATCGAGTTGGGCGAGCTGCAAGGGCTGGTCGTATTGGCACTGCATATTCTCTTGTCACATCCGACGACATGGCTTATTTGTTAGATCTTCATCTCTTTCTATCTAAACCAATCAGGGCTGCACCAACTGAGGAAGAGGTTTTACAAGATGTGGATGGAGTCCTGTCCAAAATAGATCAAGCAGTTGCCAATGGAGAAACTGTCTATGGACGTTTTCCACAAACTGTTCTAGATCTCCTCTCAGATAGAGTTCGGGAAATCATTGATCATTCAACTGAATTAGAAACTCTGCAAAGGCCATGTACGAAAGCATTTGGGTTGTACTCAAAGACAAAATCAAAGCCTTCTAAAGAGTCCATTAAAAGAGTAAAAGACCTACCCCGCGAAGGGTTGCATCCAATGTTCAAAAATGACCTCCGTGGTAATGAATTATCAGCAATGGCCTTTTCTGAACGCTTGAAGGCCTTCAGACCTAAGCAGACAATCCTGGAAGCTGAAGGTGAAGCCGCTAAGTCAAAAAAACAAAATCAATGGGTTGATGTGATGAAGATGAAAAGAGCTATTCATGAGGAGGTCATTAATAAAGTTCGTCAACAGCGCTCGAGTGTTCCCGCTTCAAAGGAAGATGATTTTGATCCCACTCCTTCAAAAAGGAAGGACAAACAAGTTTCTGGTTCTAAAAGGAAAGCAAAGATTTTTAAAGACGAAGAGTACTTCATAAGTGCGGTGCCAACAAATCAGCATTTTGAGGCTGGACTCTCCGTGAGGGGAAACCATGGTTTTGAATCAAAAAGGTTGGATGCTGCTGTTCTAGATTTGGTAGCTGATGACAAGAATGGGTTGCAGAAACAAAAAGTTTCATATCATTGGGATAAGAGGAGCAAGAAATACATCAAGCTCAACAATGGAGATCGTGTTACAGCTAGTGGGAAGATAAAGACAGAGAGTGGTTCTAAGGCGAAAACCAACAAAACTGGGATATACAAGAAGTGGAAAGACCAATCACACAAGAGAATATCTCTTAATGGAACTAATGATGGGAATTCTGCTGCACAATCAACTAGTTTAGCTGGTGGTCCTAGAGGTCAAGGTGGTGGCAGAAATTTCAGAGGTGGGAGAAACAATAGGTCAGTACCTAATGCCCACGTGCGATCAGAAATTAAAGATGTTGATCAAGTTCGAAAGGAAAGAGAGAAGAAGGCCCAAAGAGCATCATATTTGAAGACCAAGAAGGGGAAAAAGTCTTACAAAGGTGGCAAAAAGGGAAATGGAAAGGGTAAGGGTAAGGGAAGACATGGTTGATTCCAGCTTATCAACTCATTTACTCATGACGGGGATCTCCATTTTGCAAGCTTTACACATGCAAATCCAGAAGAGCACTAGGGAACATTCTTTCACAGGAGTTGACTTATCTTTTCTTATAATTCAGTGGAAATAAAGTGAAATTTCCATTGTATACTTGTGCAGCTTGGTATGCAATAGGCGGCCATTTTTACAGTATTTATCGGTGGGAGCATCGCCTGTGGACATACTGTGTATGAAACTTCCAGCTTCTCTCTGTCGAATGGTTCCATGCTTTTTATAGAGGTGAAATAGCACAACTCTACAAGTACTTTTGATAGAAAAGTTGTACCAGATTAACTATTCGTTTAGGAATATAATTTACATCTGCTTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc10g009070.2.1SL2.50ch10:3093424..3105024786-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc10g009070.2SL2.50ch10:3093051..310511312,063-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc10g009070.2.1.1SL2.50ch10:3104661..3105113453-2
exonexon:Solyc10g009070.2.1.10SL2.50ch10:3093980..3094118139-2
exonexon:Solyc10g009070.2.1.11SL2.50ch10:3093051..3093654604-n/a
exonexon:Solyc10g009070.2.1.2SL2.50ch10:3103222..31043831,162-1
exonexon:Solyc10g009070.2.1.3SL2.50ch10:3103074..310312855-n/a
exonexon:Solyc10g009070.2.1.4SL2.50ch10:3099929..310002496-n/a
exonexon:Solyc10g009070.2.1.5SL2.50ch10:3098521..309856646-2
exonexon:Solyc10g009070.2.1.6SL2.50ch10:3097631..309770474-n/a
exonexon:Solyc10g009070.2.1.7SL2.50ch10:3097427..309747953-1
exonexon:Solyc10g009070.2.1.8SL2.50ch10:3095963..309604482-n/a
exonexon:Solyc10g009070.2.1.9SL2.50ch10:3095821..309587757-n/a
intronintron:Solyc10g009070.2.1.10SL2.50ch10:3094119..3095820n/a-n/a
intronintron:Solyc10g009070.2.1.11SL2.50ch10:3093655..3093979n/a-n/a
intronintron:Solyc10g009070.2.1.2SL2.50ch10:3104384..3104660n/a-n/a
intronintron:Solyc10g009070.2.1.3SL2.50ch10:3103129..3103221n/a-n/a
intronintron:Solyc10g009070.2.1.4SL2.50ch10:3100025..3103073n/a-n/a
intronintron:Solyc10g009070.2.1.5SL2.50ch10:3098567..3099928n/a-n/a
intronintron:Solyc10g009070.2.1.6SL2.50ch10:3097705..3098520n/a-n/a
intronintron:Solyc10g009070.2.1.7SL2.50ch10:3097480..3097630n/a-n/a
intronintron:Solyc10g009070.2.1.8SL2.50ch10:3096045..3097426n/a-n/a
intronintron:Solyc10g009070.2.1.9SL2.50ch10:3095878..3095962n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17947503%2Fdetails feature 17947503
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