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Solanum lycopersicum mRNA Solyc09g015930.2.1

mRNA details  
Name
Solyc09g015930.2.1
Type
mRNA
Length
2,142
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 **** D3TRA6_GLOMM); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch09:11381642..11399733
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
18092
Nb exon
14
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g015930.2.1 ATP-dependent RNA helicase (AHRD V1 **** D3TRA6_GLOMM); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TGTGGTTAATACTCTTTTGGTTTCTTGTGTCCAGAAAAATAAATAGTCTCATCTTATCCCGCGAAAAAAGAAAGGAAATAGATAGTAATACCCTAACGGCGAGCGACGGAGAATGTCTTATGTACCTCCTCACCTGAGAAATTCTGCTGCCGGAAAAACCACTACCACCCCTACTATAAACAGTATAGGCGCCGATCACTTCTCTTCCAAACACACATCCAGAATTTCTTCTCTCGAAAAGTCTTCCAACGGTTACTCCAGTTCAGCTCGCCGGAGTTCCCTCAATTACTCCTTGCCCAACACTTTTGCTGTCCCTGACCCCATCTTTCCTCACTGGAAGCCTTCCGAACGTGTTCTTCGTCTTAAATCCGAGCAGATAGAAGAGATTCGACTGCGGCTTAATGTAGATGTCAATGTTTCTCCAGTCTCATGTCCTGCACCCTCACCTATTGAGTCATTTCCTGATATGTGCTTGCATGCAAGTATAATGAAGGATATTGAAAAGCATGGCTACACTGCACCGACTTCTATTCAGGCTCAAGCCATGCCTGTTGCTCTTAGTGGCAGGGATCTCTTGGGGTGTGCAGAAACTGGTAGTGGGAAGACTGCTGCATTCAGCATACCTATGATACAGCATTGCCTAGCTCAACAACCTCTTCAACGTGGTGATGGACCTTTGGCATTAGTGTTGGCACCTACAAGAGAGCTTGCACAACAAATAGAGAAAGAGGTTACGGCTTTCAGCATGTCTTTGGATTCCTTTAAGACCGCAATTGTTGTAGGTGGGACAAACATTAGTGAGCAGAGGTCTGAGCTTCGAGCAGGAGTACATATAGTTGTTGCTACTCCGGGAAGACTTATAGATCATTTACAACAAGGAAATACTTCCCTCGGTAGGATTGCTTTTGTAGTTTTGGATGAGGCTGATAGAATGCTTGACATGGGGTTTGAACCTCAGATAAGAGAGGTGATGCGAAATCTTCCGGTAAAACATCAAACACTGCTCTTCAGTGCCACCATGCCAGCAGAAATTGAAGCATTGGCACAGGATTACTTGACTAATCCTGTGCGAATAAAAGTTGGAAAAGTAAGCAGCCCGACAGCAAATGTTTCCCAAACTTTAGAGAAGGTACCCGAAAATGATAAGATTGATCGCCTTCTGGATTTGCTGGTTGAGGAGGCTGCTCAAGCTGAAAAATCTGGCCATCCTTTCCCTTTGACCATTGTATTTGTGGAACGGAAGACAAAATGTGATGAAGTAGCAGAAGCTTTAACGCAGCAGGGTTTGCTTGCAACTGCACTTCATGGTGGTCGTAGCCAAAATGAAAGAGAGGCTGCCCTTCGTGATTTCAGACATGGACCTATCAATATCTTGGTTTCTACTGATGTTGCGTCTAGGGGGTTGGATGTCACTGGAGTTGCACATGTAATTAACCTAGATCTTCCAAAGACCATGGAAGATTATGTACACCGGATTGGAAGGACTGGTCGTGCAGGGTCAACGGGCCGAGCTACTTCATTCTACACTGATCGTGATATGTATCTTGTGGCTCAAATAAGAAGAGCAATAGCTGATATTGGTTCTGGCAATGATGTAACCATTGCTATGGGAAAGACTGCAAGAAGAAAGGAGAGAGAAGCTGCAGCTGCGGAAAAAGAAGCAAGGAGTGAATTGTCTAAATTCTCTTTAGTAGGGTCCACGGTAAATGTGGAGGATAAGTATAGGCACATGATTGCCCCATCGATGATTAAAAAGGAGGGAGCTGCAGATGACGCTTGGGATGACTGATGTTTGTTGTATGTGCCTCTACTCCGATGGTAGTAGCGATGCTCCAATGTGTGTACATTTGTTGTGCAAAAACATCTTTAACATGCAAGAATGGAAATCAGCAACATAAGGAGCTGCTAGCCCTTGAAACCCTTTGTGTGTAGTATTTAGTGTTTTACACGTTCTTTGGTTCTTATCCATGAAGGGTACATTGAGCAGTTTTGCAGGCCGGGTAGGAAATGTGCTAAAAATGACTTGTCAAGTCTTAATTCCATTTGTCTAGATTTTTGATAATACTTTACACGCACACTGTTTTATTCTGCACAAGGCTGTAGTAGTGGGATATTCTCGAGTATTTACATCAACTTCTTTCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g015930.2.1SL2.50ch09:11381753..11399380559+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g015930.2SL2.50ch09:11381642..1139973318,092+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g015930.2.1.1SL2.50ch09:11381642..11382017376+n/a
exonexon:Solyc09g015930.2.1.10SL2.50ch09:11395416..11395547132+n/a
exonexon:Solyc09g015930.2.1.11SL2.50ch09:11398355..1139842975+n/a
exonexon:Solyc09g015930.2.1.12SL2.50ch09:11398825..1139891490+n/a
exonexon:Solyc09g015930.2.1.13SL2.50ch09:11399009..1139908375+n/a
exonexon:Solyc09g015930.2.1.14SL2.50ch09:11399207..11399733527+n/a
exonexon:Solyc09g015930.2.1.2SL2.50ch09:11382444..1138253693+n/a
exonexon:Solyc09g015930.2.1.3SL2.50ch09:11382637..11382801165+n/a
exonexon:Solyc09g015930.2.1.4SL2.50ch09:11382923..1138301896+n/a
exonexon:Solyc09g015930.2.1.5SL2.50ch09:11383690..1138376475+n/a
exonexon:Solyc09g015930.2.1.6SL2.50ch09:11383977..11384138162+n/a
exonexon:Solyc09g015930.2.1.7SL2.50ch09:11384851..1138493181+n/a
exonexon:Solyc09g015930.2.1.8SL2.50ch09:11385607..1138570599+n/a
exonexon:Solyc09g015930.2.1.9SL2.50ch09:11390813..1139090896+n/a
intronintron:Solyc09g015930.2.1.1SL2.50ch09:11382018..11382443n/a+n/a
intronintron:Solyc09g015930.2.1.10SL2.50ch09:11395548..11398354n/a+n/a
intronintron:Solyc09g015930.2.1.11SL2.50ch09:11398430..11398824n/a+n/a
intronintron:Solyc09g015930.2.1.12SL2.50ch09:11398915..11399008n/a+n/a
intronintron:Solyc09g015930.2.1.13SL2.50ch09:11399084..11399206n/a+n/a
intronintron:Solyc09g015930.2.1.2SL2.50ch09:11382537..11382636n/a+n/a
intronintron:Solyc09g015930.2.1.3SL2.50ch09:11382802..11382922n/a+n/a
intronintron:Solyc09g015930.2.1.4SL2.50ch09:11383019..11383689n/a+n/a
intronintron:Solyc09g015930.2.1.5SL2.50ch09:11383765..11383976n/a+n/a
intronintron:Solyc09g015930.2.1.6SL2.50ch09:11384139..11384850n/a+n/a
intronintron:Solyc09g015930.2.1.7SL2.50ch09:11384932..11385606n/a+n/a
intronintron:Solyc09g015930.2.1.8SL2.50ch09:11385706..11390812n/a+n/a
intronintron:Solyc09g015930.2.1.9SL2.50ch09:11390909..11395415n/a+n/a
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http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17925839%2Fdetails feature 17925839
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