Solanum lycopersicum mRNA Solyc03g118420.2.1

mRNA details  
Name
Solyc03g118420.2.1
Type
mRNA
Length
3,639
Organism
Solanum lycopersicum
Description
NF-X1 finger transcription factor (AHRD V1 **-- C5GCI1_AJEDR); contains Interpro domain(s) IPR000967 Zinc finger, NF-X1-type
Location(s)
SL2.50ch03:67298877..67302668
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0008270
Length
3792
Nb exon
3
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g118420.2.1 NF-X1 finger transcription factor (AHRD V1 **-- C5GCI1_AJEDR); contains Interpro domain(s) IPR000967 Zinc finger, NF-X1-type

CACCAAGGCGAATTTTTAGCCCTATTTATACCTTTCATTACTCCTCTTTTCTTCATCCTCCTCCGTCATCTTCTCCACAGAAAATTCAGTAGCCGACTCCGGAGAATCAAAACTCTCTTCTGTTTCTGGATTTTGTCTTCGGCGGGCTGTTTGATCTTTGTTTCATCGAATCAGAAATCTGTCGTTGGATAGGTTAATAAGAAATTCAAGTCAGAATATGAGCTTTCCTGCACAAAACAATAGAAGGAATAACAACAGTAATCGGCCTAGAAACAATAATAATAATCCTGTTGTTCAAAGTGGTGGTGCTCGTCGTGAGTGGGTAGCTAGGGGATCTGCTCCAACCAACACTGTTCCATTTTCAGCTGCCCCTGTTACCCCGGTAACAACAACCACTGTTGTGACCCCTGTGTTTGGTGGGAATGGAAGAGACAATGAGAATGTGTCATCTGCACCGTTTAATCGATTTCAAAATCAAAATCAGACCTATGGGGAACCTAAATTCAATAGGGGGATGTATGGGAATCAGAGGGGAAGGGGCAGGGGGAGCTATAATCATCAGGAGAACAAGATGGAGAGGCCGGTCAGGGAGGTCAGTGGGAGGATTAATCAAGAGCGGGTGAAAGATCCTAATTTGCCTCAACTTGTGCAAGAAATAGAGGAGAAGCTTTTGAAGGGAAACATCGAGTGCATGATATGCTACGATATGGTGAGGAGGTCTGCGCCCATGTGGTCATGTTCGAGCTGCTACTCGATTTTTCATTTGCATTGTACCAAGAAATGGGCAAGAGCTCCAACTTCTGTTGACACATCTGCGGAGAAGAATCAAAGGTTTAATTGGCGTTGCCCAGGTTGTCAATCAGTCCAACTCACTTCGTCCAGGGACATACGGTATCTTTGCTTTTGTGGGAAGAGGCAAGACCCCCCTTCAGATTTATACTTGACTCCACATTCATGTGGGGAGCCTTGTGGCAAGAAACTTGAGAAGGAGCTTCCAGGGAATGGTCTGAGTGAAGAGGATCTTTGCCCTCATGTTTGTGTCTTACAGTGCCATCCTGGTCCTTGTCCACCTTGTAAGGCATTTGCTCCAGCTAGAAGTTGTCCCTGCGGAAAGGAAGTAATTACCACTCGTTGCTCTGATCGGAAGTCCGTTCTTACATGTGGACAGCAGTGTGGTAAGCTTCTTGACTGTGGGCGTCATCGGTGTGAACAGACTTGCCATGTTGGTCCTTGTGGCCATTGTCAAATTGTTGTGGATGCCCATTGCTTTTGTAAGAAGAAAACAGAGTCTCTTCTTTGTGGAGATATGGGTGTGAAAGGAGATATCAAGATGGAGGATGGCGTCTTTTCATGCAATTCAGTTTGTGGAAAGAAGCTTTGTTGCGGAAATCACATCTGCCGTGAGCTCTGCCATCCAGGGCCATGTGGGGACTGTGCTTTGTTGCCTAGCAAGGTCAAGACATGCTGTTGCGGTAAAACCAGCTTGGAAGAAGAAAGGCACAGTTGTTTGGATCCAATTCCAACCTGTTCCAAGGTCTGCGGAAAGCGTCTCCGTTGTGGGGTACATCGCTGTGAAGCTGTGTGCCATTCTGGTGACTGTGCACCATGTCTTGTTCCTGTGACTCAACGCTGCCGCTGTGGGTCAACCTCTCGAACAGTGGAGTGCTACAAAACGCAGGCAGAAGATGAGCAGTTCACTTGTGATAGACCTTGTGGGCAAAAGAAGAACTGTGGAAGGCACCGTTGTAGTGAGCGATGTTGCCCTCTTTCTAATCCAAAAAATTCCATAACTGGTGGTTGGAATCCTCATTTTTGTTCAATGCCGTGTGAGAAGAAGCTTAGATGTGGGCAGCATTCTTGCGAGTCGCTTTGTCACAGTGGTCACTGCCCTCCCTGCCTTGAGACAATTTTCACCGATTTGACTTGTGCTTGTGGGAGAACATCAATCCCTCCTCCGCTACCTTGTGGCACACCTCTTCCTTCGTGTCAGCTACCATGCTCGGTTTCTCAGCCTTGTGGCCATCCACCTACTCACAGCTGCCATTTTGGAGACTGCTTGCCATGTGCTGTTCCTGTAGCAAAAGAGTGCGTTGGTGGACATGTAATTTTAAGGAACATACCTTGCGGGTCAAAGGACATCCGATGTAACAAGCTTTGTGGGAAGACCAGGCAGTGTGGCTTGCACTCATGTGCTAGAACTTGTCATCCTTCGCCATGTGATGTTTCTGCTGGACCTAGCAATGGCTCCAGAGCCTCTTGTGGGCAGACGTGTGGTGCTCCTAGAAGAGATTGCAGGCACACATGTACTGCTCTCTGTCATCCCTCTTCTTCATGTCCTGATGTTAGATGTGAGTTTCCTGTCACTATTACTTGTTCTTGTGGCCGGATTACAGCAAATGTTCCTTGTGATGCTGGAGGTCAGATCGTTGACTCTGTTCTCGAAGCCTCTATAATCCACAAGCTGCCTTCATCTCTTCAACCTATTGAAATAAATGGGAAGAAGGTTCCTCTCGGTCAGAGGAAGCTTACTTGTGATGACGAGTGTGCAAAGATGGAGAAGAAAAAGGTTCTTTCTGATGCTTTTGGTATAACCCCCCCTAATCTTGAGTCCCTCCATTTTGGTGAGAATGCAGCTGTCTCTGAAGTGCTGGGGGATCTTCTTAGGCGGGACGCTAAGTGGGTGTTGTCTATAGAGGAAAGATGCAAGTTTTTGGTTCTTGGCAGGAGCAGAGGGGGGCTGAATGCGCTCAAAGTTCATGTTTTCTGCCCAATGTTGAAAGAAAAGCGGGATGCAATTAGACTGATAGCTGCAAGATGGAAGCTTTCAGTAAATGCAGCTGGTTGGGAGCCCAAAAGATTCATCGCTGTACATGTTATACCCAAGTCCAAAGCTCCAAGTCGTATACTTGGTCCTAAAGGTTGTACTGTCAATAACATTGTTCAGCCTGCTGTTTTTGATTCTCTGGTGGATATGGATCCAAGGCTTGTTGTAGCTTTGTTTGACTTGCCAAGAGATGCAGACATTAGTGCCTTAGTTCTCAGGTTTGGTGGTGAGTGCGAGCTTGTCTGGTTGAACGACAAGAATGCCTTGGCTGTGTTCAGTGATCCTGCCCGAGCAGCAACAGCTATGAGAAGGCTAGACCAGGGGTCGGCTTATTGTGGTGCTGCTGTAGTTCATCAGAGTGGTGTTGCATCAGCAGTGGCATCCACTACTAATGTTTGGGGAGTCTCTGGAGGAGCCAAGGACGCGGGAGGAGTTGCATCAGCTCTTAAGGGTAATCCATGGAAGAAGGCTGTAGTCCAGGACCCCTTCTGCCTGGAGGGCGAATGAAGCTCCACCTACTGCCTCGTCTAATAGGTGGAGTGTCTTAGAGCCTGAAATTGCTTCCAGCTTGCCCAGGACATCTATTACAATCAAGGAACCTGTTACTGAGACACAAGTGGGGGGTTCAGTTTTGCCTCCCAAACCTCAAGATGTGGGGATCGATGATATGGCAGATGTAGTGGACGATTGGGACAAGGCTTACGACTGAGAGCTTCTGGAAATGCATATTGTTTTTGCTGTCCAATTATTTCTTTCATTTTTTCTTTTTAGTGCTCAGACAGGAGCTGGTTTAGTTATGTTTAGTAGCCCTGTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g118420.2.1SL2.50ch03:67299181..673023601,038+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g118420.2SL2.50ch03:67298877..673026683,792+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g118420.2.1.1SL2.50ch03:67298877..67299050174+n/a
exonexon:Solyc03g118420.2.1.2SL2.50ch03:67299139..673022703,132+n/a
exonexon:Solyc03g118420.2.1.3SL2.50ch03:67302336..67302668333+n/a
intronintron:Solyc03g118420.2.1.1SL2.50ch03:67299051..67299138n/a+n/a
intronintron:Solyc03g118420.2.1.2SL2.50ch03:67302271..67302335n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17777091%2Fdetails feature 17777091
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