Solanum lycopersicum mRNA Solyc03g115650.2.1
 mRNA details
|
| Name | Type |
Length
773
|
Organism |
|
Description
Eukaryotic translation initiation factor 5A (AHRD V1 **** D6N3G5_GOSHI); contains Interpro domain(s) IPR001884 Translation elongation factor, IF5A
|
|
Location(s)
SL2.50ch03:65287614..65290545
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0045905
- Length
- 2932
- Sifter term
- GO:0003743
- GO:0047485
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g115650.2.1 Eukaryotic translation initiation factor 5A (AHRD V1 **** D6N3G5_GOSHI); contains Interpro domain(s) IPR001884 Translation elongation factor, IF5A
CTAAAATTTGAGCGTTATACGACTGCGTCACTTAAACGCTTTATCATATCATATATATACACGAAAAGAAACAGGCAAGCAAATCCCTCAGTCCCAGTAGTCCCAAATTTCTCCTTCTCCTTAATCCTCTCCACCGGCGAACCGGCGAAGATCAAAACGATGTCGGACGAAGAGCACCACTTCGAATCCAAGGCCGATGCCGGAGCTTCAAAGACGTATCCTCAACAAGCTGGTACTATTCGTAAAGGTGGTCACATCGTCATAAAAAATCGTCCTTGCAAGGTGGTTGAAGTTTCAACTTCCAAGACAGGCAAGCACGGTCATGCTAAATGTCACTTCGTGGCAATTGACATTTTCACTGGAAAGAAACTTGAGGATATTGTTCCCTCTTCTCACAATTGTGATGTTCCTCATGTGAATAGGACTGATTATCAACTTATTGATATCTCTGAGGATGGCTTTGTGAGTCTGTTGACTGAAAATGGTAACACCAAGGATGACTTGAGACTCCCAACTGATGATACTCTTCTGGCTCAGGTAACACAGGTCAAAGATGGTTTTGCTGAGGGGAAAGACCTGGTTCTATCAGTGATGTCTGCCATGGGAGAGGAGCAGATTTGTGGTATCAAGGACATTGGCCCTAAGTAGCTGCAGATGGTATTGGTGTATGTTTACAGAGTTTCTATAAAAGATGTATTAAGAACCAAAACTTCTTTACTTTCTCTTGCAGTTGCTCTATATAACTGCCATTTAACTATTATTATATGCAAAAT
CTAAAATTTGAGCGTTATACGACTGCGTCACTTAAACGCTTTATCATATCATATATATACACGAAAAGAAACAGGCAAGCAAATCCCTCAGTCCCAGTAGTCCCAAATTTCTCCTTCTCCTTAATCCTCTCCACCGGCGAACCGGCGAAGATCAAAACGATGTCGGACGAAGAGCACCACTTCGAATCCAAGGCCGATGCCGGAGCTTCAAAGACGTATCCTCAACAAGCTGGTACTATTCGTAAAGGTGGTCACATCGTCATAAAAAATCGTCCTTGCAAGGTGGTTGAAGTTTCAACTTCCAAGACAGGCAAGCACGGTCATGCTAAATGTCACTTCGTGGCAATTGACATTTTCACTGGAAAGAAACTTGAGGATATTGTTCCCTCTTCTCACAATTGTGATGTTCCTCATGTGAATAGGACTGATTATCAACTTATTGATATCTCTGAGGATGGCTTTGTGAGTCTGTTGACTGAAAATGGTAACACCAAGGATGACTTGAGACTCCCAACTGATGATACTCTTCTGGCTCAGGTAACACAGGTCAAAGATGGTTTTGCTGAGGGGAAAGACCTGGTTCTATCAGTGATGTCTGCCATGGGAGAGGAGCAGATTTGTGGTATCAAGGACATTGGCCCTAAGTAGCTGCAGATGGTATTGGTGTATGTTTACAGAGTTTCTATAAAAGATGTATTAAGAACCAAAACTTCTTTACTTTCTCTTGCAGTTGCTCTATATAACTGCCATTTAACTATTATTATATGCAAAAT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g115650.2.1 | SL2.50ch03:65287772..65289983 | 163 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g115650.2 | SL2.50ch03:65287614..65290545 | 2,932 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g115650.2.1.1 | SL2.50ch03:65287614..65287895 | 282 | + | n/a |
| exon | exon:Solyc03g115650.2.1.2 | SL2.50ch03:65289141..65289263 | 123 | + | n/a |
| exon | exon:Solyc03g115650.2.1.3 | SL2.50ch03:65289362..65289418 | 57 | + | n/a |
| exon | exon:Solyc03g115650.2.1.4 | SL2.50ch03:65289514..65289592 | 79 | + | n/a |
| exon | exon:Solyc03g115650.2.1.5 | SL2.50ch03:65289877..65290101 | 225 | + | n/a |
| exon | exon:Solyc03g115650.2.1.6 | SL2.50ch03:65290539..65290545 | 7 | + | 2 |
| intron | intron:Solyc03g115650.2.1.1 | SL2.50ch03:65287896..65289140 | n/a | + | n/a |
| intron | intron:Solyc03g115650.2.1.2 | SL2.50ch03:65289264..65289361 | n/a | + | n/a |
| intron | intron:Solyc03g115650.2.1.3 | SL2.50ch03:65289419..65289513 | n/a | + | n/a |
| intron | intron:Solyc03g115650.2.1.4 | SL2.50ch03:65289593..65289876 | n/a | + | n/a |
| intron | intron:Solyc03g115650.2.1.5 | SL2.50ch03:65290102..65290538 | n/a | + | n/a |
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