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Solanum lycopersicum mRNA Solyc02g077560.2.1

mRNA details  
Name
Solyc02g077560.2.1
Type
mRNA
Length
2,865
Organism
Solanum lycopersicum
Description
Auxin response factor 3 (AHRD V1 **** Q2LAJ4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch02:42460284..42466816
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0032776
  • GO:0005634
  • GO:0006355
Length
6533
Nb exon
12
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g077560.2.1 Auxin response factor 3 (AHRD V1 **** Q2LAJ4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGTGAAGGACACTCACATAAAGTGTGATTTGATATGTAGAGAAAAAGCATTTCACTTTTTAGAGAGAGAAAGAAGAGAGAGAAAGAGAGGTCATCTTCTTTATGCAATGCGGTGAGTGCGCAGTTGAACTAGCAAAAGGGTTTAAAGATGATGTGTGGACTTATTGATCTGAATACTGTGGATAACGATGATGCCGGAGAAGAAACGACGGCGCCGGTGTCATTGGATTCACCGGCGTCGTCGTCGGCGGCATCAGGAAGTTCGGATTTAACGTCGTCAACTACGCCAGCGGTGGCATCGGTGTGTATGGAGCTTTGGCATGCGTGTGCTGGACCGTTGATTTCGCTGCCGAAGAAAGGAAGTGCGGTTGTGTACCTGCCTCAAGGTCACTTGGAACATTTATCTGAGTACCCGTCCATAGCCTGTAATCTCCCTCCTCATGTGTTTTGTCGCGTTGTAGATGTGAAGCTACAAGCAGATGCGGCTACTGATGAGGTCTATGCACAAGTCTCACTAGTTCCTGACAATCAGCAGATTGAGCAGAAATGGAAGGATGGAGACATTGATGCTGATATTGAAGAAGAGGAAATAGAAGGTGCTGGAAAATCAATAACACCACACATGTTCTGCAAAACTCTTACTGCATCGGATACCAGCACTCATGGTGGTTTCTCTGTCCCTCGGCGGGCAGCAGAAGATTGTTTTGCTCCCTTGGATTACAGACAACAGAGGCCCTCGCAGGAGCTGGTAGCCAAAGATCTACATGGTATAGAGTGGAAATTTCGGCATATCTATCGGGGTCAGCCACGGCGGCATCTGCTCACTACAGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTTTCTGGTGACGCTGTTCTTTTCTTGAGGACTGGTGATGGAGAGCTTAGGTTAGGAGTGAGACGAGCTGCCCAAGCAAAAACATGTTCTAGTTATCTGGCTCCTTGTAGCAAACCGTTGAATGTTAGTGGCATTGTAGATGCTGTTAACGTTATATCTAGCAGAAATGCTTTCAACATTTGTTACAACCCAAGGGATAGCTCATCGGATTTCATTGTACCTTACCACAAATTCTCTAAGACTCTTGCACATCCCTTTTCAGCTGGAATGAGGTTTAAAATGCGTGTCGAAACAGAAGATGCAGCTGAGCAAAGGTTCACTGGACTAGTTGTGGGAGTCAGCAATGTAGATCCAGTTCGATGGCCAGGTTCTAAATGGAGGTGCCTATTGGTCAGATGGGATGATCTTGATGTTTCTAGACATAATAGGGTTTCACCATGGGAGATTGAGCCATCTGGTTCAGCTCCTGTGCCCAGCAGCTTGGTGATGCCTTCTGCTAAGAGGACCAGGGTTGGCTTCCCTATTTCAAAGGCAGATTTTCCAATTCCTAGAGAAGGAATTGCAGTATCAGACTTTGGGGAACCTTCTAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGAGGATGCATGCTCCTTATGGCGGACTTGATGCTCGGAGTCCTCGTCCAGCAGGCACAAGATGCTTTCCTGGTTTTCCTAGTTCTGGGATATCTAGAATGGGAAACAGCATCAGACCCCTGTTTGGTGACACTGACAAGTCCCATGAAAGCATTGGCTTTAGTGAATCTCTTCGATTCAATAAGGTCTTGCAAGGTCAAGAAATTTTTACAAGCCCTCCTTATGGGAGAGCTCAAGCTGGTATCCAAATGCAGGAGAAAAGTAGGACCGGTATTTTTGTCGGTATTCAGGTTCCAAACCATGGAAACAGGTGGCCTGCTCCAAATCAGGATAATAACACTCCTTGCAAGCCAATTAATCCTGTCTCAGCATCATCACCGCCTTCTGCACTCAATTTTCAGCATCCGAGCCCTCCAGCATCAAAGTTCCAGGCTATGTTCAATCATAAACATGATCTTGTTAACCAGGCTTCGTTAGATCTGTCTGAGAACTGTTGTAGGTATCCGTATCTCTCATCTGGTTCACATACCGAGGACATCAGTCAGAAGGAAGGTACTCAAGGAATCAGCTCGTTTGGTTTCTTAAAGGAGCAAAAGCAAACAGGACTTTCATATCTTTCTCTTGGGACACAGTCGTCATTCAAAGGCAATCAAAACTTAGTTTCCACTTGTAAAACTGGTTGCAGGATCTTTGGGTTCCCCTTGACCGAGAGTAAAATAAGTGCAACTAGAGCGGATACTCCCTCTGAAGCTGTATACTCACATGGTCTAGAAACTACATTTCTCCCTTCCAGTGATGGAAAGTTGCAGCCGGGGCCACCATTGATGACTAACGTTGTGGGGACAAATTTTACCAAAGTAAATGACCTCTATGCAGCAAGAGATGTGCTTCTTGATATTGCTCTGTAGCAGGTGTTTGTTGTGAGGTTGTGCTAGAATATGTAGACTGAAGGATGTGTGTGCAGCATTATTGATTATTAGCTTTTAGTTGGCGTTGTAATCTTCTGGCTGTTGAGTGCGCAAGCATTTGGTTGCCAGTAGAATGCTTATCCAGAGATGAGAATTGAGAGTTATTAATGAAGATTGATACCGTTGAGGAACGTATGTTCTTGAAAATTTGGTGTATATGTTCCTGTGACGCTGATGTACTATGTAACAATTGGAAGCTGTGTTTGCTGCATCAAAGATGTCTGTATGATAGTTGTACTCTACTTGAGATGACTTCTGTATTTGTATATTTACCTAGTCTAGATTTGCTGTGAACTAACTCGAGCTCCTATAAATCGGTAAGTTTGTTGTAGGAGCTCTCGTCTCAGGAACACAATACTGTACTGAATTTTGTAAGGAATTGTCATGTATATTCCTGCAATTAAACAAGCTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g077560.2.1SL2.50ch02:42460562..42466019748+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g077560.2SL2.50ch02:42460284..424668166,533+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g077560.2.1.1SL2.50ch02:42460284..42460422139+n/a
exonexon:Solyc02g077560.2.1.10SL2.50ch02:42464726..42464888163+1
exonexon:Solyc02g077560.2.1.11SL2.50ch02:42465043..424662211,179+n/a
exonexon:Solyc02g077560.2.1.12SL2.50ch02:42466546..42466816271+2
exonexon:Solyc02g077560.2.1.2SL2.50ch02:42460554..42460889336+n/a
exonexon:Solyc02g077560.2.1.3SL2.50ch02:42461054..4246111057+n/a
exonexon:Solyc02g077560.2.1.4SL2.50ch02:42461513..42461695183+n/a
exonexon:Solyc02g077560.2.1.5SL2.50ch02:42461816..4246190085+n/a
exonexon:Solyc02g077560.2.1.6SL2.50ch02:42461987..4246207791+n/a
exonexon:Solyc02g077560.2.1.7SL2.50ch02:42462151..42462315165+2
exonexon:Solyc02g077560.2.1.8SL2.50ch02:42463050..42463169120+1
exonexon:Solyc02g077560.2.1.9SL2.50ch02:42463280..4246335576+1
intronintron:Solyc02g077560.2.1.1SL2.50ch02:42460423..42460553n/a+n/a
intronintron:Solyc02g077560.2.1.10SL2.50ch02:42464889..42465042n/a+n/a
intronintron:Solyc02g077560.2.1.11SL2.50ch02:42466222..42466545n/a+n/a
intronintron:Solyc02g077560.2.1.2SL2.50ch02:42460890..42461053n/a+n/a
intronintron:Solyc02g077560.2.1.3SL2.50ch02:42461111..42461512n/a+n/a
intronintron:Solyc02g077560.2.1.4SL2.50ch02:42461696..42461815n/a+n/a
intronintron:Solyc02g077560.2.1.5SL2.50ch02:42461901..42461986n/a+n/a
intronintron:Solyc02g077560.2.1.6SL2.50ch02:42462078..42462150n/a+n/a
intronintron:Solyc02g077560.2.1.7SL2.50ch02:42462316..42463049n/a+n/a
intronintron:Solyc02g077560.2.1.8SL2.50ch02:42463170..42463279n/a+n/a
intronintron:Solyc02g077560.2.1.9SL2.50ch02:42463356..42464725n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17727975%2Fdetails feature 17727975
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