Solanum lycopersicum mRNA Solyc01g100320.2.1
 mRNA details
|
| Name | Type |
Length
1,419
|
Organism |
|
Description
Thioredoxin/protein disulfide isomerase (AHRD V1 **** Q2U681_ASPOR); contains Interpro domain(s) IPR005788 Disulphide isomerase
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|
Location(s)
SL2.50ch01:90386154..90392614
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016853
- GO:0045454
- GO:0005783
- Length
- 6461
- Nb exon
- 12
- Sifter term
- GO:0003756
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g100320.2.1 Thioredoxin/protein disulfide isomerase (AHRD V1 **** Q2U681_ASPOR); contains Interpro domain(s) IPR005788 Disulphide isomerase
CTCAATTTATTGTTTGTTTGTTTCTTTTTTCTCCTCTTTTTGAAAATAATATAACTCACAATAACAAGAATAGGAGCTAGTAAAAATGGGGAGATCACAGATCTGTAGTGCTTTAGCAATTTTAGCTTTGTTCTTCTTCTCTTCAGCTTTGGCAGATGATGTCGTTGTTTTGACCGAAGAAAACTTCGACAAGGAGATCGGTCAAGATCGCGCTGCTCTCGTTGAGTTCTACGCTCCTTGGTGTGGGCACTGTAAAAAGCTTGCTCCTGAGTATGAAAAGCTtggtgcaagTTTCAAGAAAGCAAAGTCTGTTTTGATCGGAAAGATTGATTGTGATGAACATAAGAGTGTTTGCAGCAAATATGGGGTTCAAGGTTACCCCACTATCCAATGGTTTCCAAAGGGATCACTGGAGCCAAAAAAATACGAAGGTGCACGATCTGCTGAAGCCCTTGCCGAGTACGTGAACAGCGAAGCAGGGACTAATGTGAAGATTGCTTCTATCCCGTCTAGCGTTGTGGTGCTATCTTCAGATAACTTTGATGAAATTGTGCTAGATGAGACCAAGGATGTGTTGGTTGAATTTTATGCACCATGGTGTGGTCATTGCAAAAGCCTTGCTCCTATTTACGAAAAGGTAGCTACAGCGTTCAGGCAAGAGGAAGATGTTATTATTGCGAACCTTGATGCCGATAATCACAAGGATCTTGCAGAGAAGTATGGTGTAAGTGGCTATCCCACACTGAAATTCTTCCCCAAGGGAAACAAAGCTGGTGAGGATTATGATGGTGGCCGAGATGCAGATGACTTTGTGAACTTCATCAATGAGAAGTGTGGAACTAGCCGTGATTCAAAAGGACAATTTACTTCAAAGGCGGGTATTGTCGAATCACTGGATACATTAGTGAAGGAGTTCGTCGGTGCCACAAACGAGGAAAAAAAAGCTGTATTTAGCAAGATGGAAGATGAAGCTGGAAAACTGAAGGGTTCTGCTGCAAGGTATGGCAAGATTTACCTAAAGGCTGCCAAGAGTTCCATGGAAAAAGGAGCTGATTACGCCAACAATGAGATTCAGCGATTAGAGCGCATGCTTGCCAAGTCAATCAGCCCCACTAAGGCGGATGAGTTCACCCTCAAGAAGAACATTTTGGCGACGTTTGCATAAGTCCTTGCTAGTGTTGCAGCTTGTGATTATACTGCCTGGCTTGGTATCACGTGAGTTTTGCCTTAGGTCGAGAATTGCATTATCTGGTTAATCTTCTGTTGTACTTTTTTGTACTGAGAAGTATTGGACACCACAGATCTATTTAGGCATTTTGTTTAGGCCAGTAGCTATATCAGCTTAGACTTTATGTCAGTTATGATTATCAGCTTCTTTTGAACAAGTAATTAGTAAAGTATTATCATCACAAAACAAAA
CTCAATTTATTGTTTGTTTGTTTCTTTTTTCTCCTCTTTTTGAAAATAATATAACTCACAATAACAAGAATAGGAGCTAGTAAAAATGGGGAGATCACAGATCTGTAGTGCTTTAGCAATTTTAGCTTTGTTCTTCTTCTCTTCAGCTTTGGCAGATGATGTCGTTGTTTTGACCGAAGAAAACTTCGACAAGGAGATCGGTCAAGATCGCGCTGCTCTCGTTGAGTTCTACGCTCCTTGGTGTGGGCACTGTAAAAAGCTTGCTCCTGAGTATGAAAAGCTtggtgcaagTTTCAAGAAAGCAAAGTCTGTTTTGATCGGAAAGATTGATTGTGATGAACATAAGAGTGTTTGCAGCAAATATGGGGTTCAAGGTTACCCCACTATCCAATGGTTTCCAAAGGGATCACTGGAGCCAAAAAAATACGAAGGTGCACGATCTGCTGAAGCCCTTGCCGAGTACGTGAACAGCGAAGCAGGGACTAATGTGAAGATTGCTTCTATCCCGTCTAGCGTTGTGGTGCTATCTTCAGATAACTTTGATGAAATTGTGCTAGATGAGACCAAGGATGTGTTGGTTGAATTTTATGCACCATGGTGTGGTCATTGCAAAAGCCTTGCTCCTATTTACGAAAAGGTAGCTACAGCGTTCAGGCAAGAGGAAGATGTTATTATTGCGAACCTTGATGCCGATAATCACAAGGATCTTGCAGAGAAGTATGGTGTAAGTGGCTATCCCACACTGAAATTCTTCCCCAAGGGAAACAAAGCTGGTGAGGATTATGATGGTGGCCGAGATGCAGATGACTTTGTGAACTTCATCAATGAGAAGTGTGGAACTAGCCGTGATTCAAAAGGACAATTTACTTCAAAGGCGGGTATTGTCGAATCACTGGATACATTAGTGAAGGAGTTCGTCGGTGCCACAAACGAGGAAAAAAAAGCTGTATTTAGCAAGATGGAAGATGAAGCTGGAAAACTGAAGGGTTCTGCTGCAAGGTATGGCAAGATTTACCTAAAGGCTGCCAAGAGTTCCATGGAAAAAGGAGCTGATTACGCCAACAATGAGATTCAGCGATTAGAGCGCATGCTTGCCAAGTCAATCAGCCCCACTAAGGCGGATGAGTTCACCCTCAAGAAGAACATTTTGGCGACGTTTGCATAAGTCCTTGCTAGTGTTGCAGCTTGTGATTATACTGCCTGGCTTGGTATCACGTGAGTTTTGCCTTAGGTCGAGAATTGCATTATCTGGTTAATCTTCTGTTGTACTTTTTTGTACTGAGAAGTATTGGACACCACAGATCTATTTAGGCATTTTGTTTAGGCCAGTAGCTATATCAGCTTAGACTTTATGTCAGTTATGATTATCAGCTTCTTTTGAACAAGTAATTAGTAAAGTATTATCATCACAAAACAAAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g100320.2.1 | SL2.50ch01:90386693..90392529 | 360 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g100320.2 | SL2.50ch01:90386154..90392614 | 6,461 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g100320.2.1.1 | SL2.50ch01:90392375..90392614 | 240 | - | 1 |
| exon | exon:Solyc01g100320.2.1.10 | SL2.50ch01:90387153..90387252 | 100 | - | n/a |
| exon | exon:Solyc01g100320.2.1.11 | SL2.50ch01:90386449..90386759 | 311 | - | n/a |
| exon | exon:Solyc01g100320.2.1.12 | SL2.50ch01:90386154..90386162 | 9 | - | n/a |
| exon | exon:Solyc01g100320.2.1.2 | SL2.50ch01:90391674..90391758 | 85 | - | n/a |
| exon | exon:Solyc01g100320.2.1.3 | SL2.50ch01:90390617..90390714 | 98 | - | 1 |
| exon | exon:Solyc01g100320.2.1.4 | SL2.50ch01:90390463..90390518 | 56 | - | 2 |
| exon | exon:Solyc01g100320.2.1.5 | SL2.50ch01:90389017..90389134 | 118 | - | 1 |
| exon | exon:Solyc01g100320.2.1.6 | SL2.50ch01:90388844..90388871 | 28 | - | n/a |
| exon | exon:Solyc01g100320.2.1.7 | SL2.50ch01:90388664..90388755 | 92 | - | 1 |
| exon | exon:Solyc01g100320.2.1.8 | SL2.50ch01:90387667..90387823 | 157 | - | n/a |
| exon | exon:Solyc01g100320.2.1.9 | SL2.50ch01:90387450..90387574 | 125 | - | 1 |
| intron | intron:Solyc01g100320.2.1.10 | SL2.50ch01:90387253..90387449 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.11 | SL2.50ch01:90386760..90387152 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.12 | SL2.50ch01:90386163..90386448 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.2 | SL2.50ch01:90391759..90392374 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.3 | SL2.50ch01:90390715..90391673 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.4 | SL2.50ch01:90390519..90390616 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.5 | SL2.50ch01:90389135..90390462 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.6 | SL2.50ch01:90388872..90389016 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.7 | SL2.50ch01:90388756..90388843 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.8 | SL2.50ch01:90387824..90388663 | n/a | - | n/a |
| intron | intron:Solyc01g100320.2.1.9 | SL2.50ch01:90387575..90387666 | n/a | - | n/a |
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