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Solanum lycopersicum mRNA Solyc01g005030.2.1

mRNA details  
Name
Solyc01g005030.2.1
Type
mRNA
Length
3,523
Organism
Solanum lycopersicum
Description
Serine/threonine-protein kinase 36 (AHRD V1 *-*- STK36_HUMAN); contains Interpro domain(s) IPR004240 Nonaspanin (TM9SF)
Location(s)
SL2.50ch01:47011..54276
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0016021
Length
7266
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g005030.2.1 Serine/threonine-protein kinase 36 (AHRD V1 *-*- STK36_HUMAN); contains Interpro domain(s) IPR004240 Nonaspanin (TM9SF)

CTGAGAAAATGGCTAAAGATATGAAAGGATCTCCTTTGGCAGCCTCTTTCGATTATGAGCTTTATGAAGGAGATCCTGATCATCTTAGAACTGTTGTTGCTGCACCTGCCCCAGCCGGTCCGTACATTGATCCTGCTTCAATCAAACTTAAACATAGGATCGGACGTGGATACTTTGGTGATGTTTGGTCAGCCACACATCATCAATCAGCTACTGAGTACGATGAGCATCATGAAGTAGCTGTAAAAAGGTTACATCCTATAAATGAGGATCAGGTAAAGGCTTTCTTAAGTAAGTTCGAGGATTTATGGGTGAAGTTGAAGTCTAAACAAATCCAAGGTGTTTGTTGGCTGCATGGTATCACTGTAATATCTGGAAAGATCTGTATAGTTATGAGATCCTATGAGGGGTCAGTTGGTGATAAAATGGCTCGTCTGAAAAGAGGGAAGCTCCAGTTACCTGATGTGCTTAGATATGGTATTGAATTGGGTAAAGTAATACAAGAATTGCATTCAATGAATGTCCTGGTTCTGAACCTTAAGCCAACTAATTTTCTTCTGAACGAACATGATGAAGTGTTCCTCGGAGACTTTGGTATACCGTATCTTCTCCTTGGAGTTCAACCGCCTGATTCAGATTTAGCACTAAGGCGTGGGACTCCGAATTACATGGCTCCGGAACAGTGGGAACCTGAGGTTAGAGGCCCAATAACTTGTGAGACTGATGCTTGGGGATTTGGATGCAGCGTTATCGAGATGTTGACTGGTGTTCAGCCCTGGTTCGGTAAATCAGTCTATGATATCTACCGTTTGGTGGTGATAAACCAAGAAAAGCCACAACTTCCTGGTGGCCTCCCCACTGCTATTGAGAATGTTCTCAATGGCTGTTTTGAGTATGATCTCCGCAATCGACCTCTGATGGTGGACATTTTGCAAGCATTTGAAAGCTCAAAGAATGCTGTTTATAGTGAAGGAGAGGGGAGCGACATAGGAGGAACTCTGTCTGAGAAAAGCAAAACCTGTGGCTTTACCACATGGTTCCTTTCAAAAGATCATCTTCAAGTGGGAGATACTATTCGCTCCAGAAAAATGTTCAACTCCAGAAATTCTCAAGATTTGGCTGTGTTGGAAGGAAGTGTTGTTGGTCTCGAGAAAGATACTGATCGAGATGGATTTGTTCTGGTACGAGTCCCCAATTTACGGAGCCCTCTTCGGGTAAATGCATCAACCATAGAGAGGGTTACATGTGGTTTGGCAACTGGGGATTGGGTGCGCTTGGTCAATGAAAGTAAGAATCACTTCTCTGTGGGCATCTTACACTCGGTGCAGCGTGATGGAAGCATCAGTGTTGGTATTTTAGGCTTAGAAACATTATGGACAGGACATTCTTCTGAAGTCGAAAAAGTTGACCCATATTTCTTGGGACAATTCGTGCAATTGAAATCAAATGTTGAAACTCCCAGGTTTGAATGGCCTAAGAAATGGGGAGGAGGATGGGCTACTGGTAGAATATCACAGATACTTCCAAATGGTTGTCTTGTCGTTCAATTTCCAGGAAGGTTGGTATTTGGTGATGAACCTAATACTTTCTTAGCTGATCCAGATGAGGTGATGGAAGTATCATTTGATACATGTCCTGGCATTATCAAGAAGTATCAGCACCTCGAGGACTTTCACTGGTGTATTCGACCACTTTCTATTGCGTTTAGCCTACTTACAGCAGCAAAGCTTGGTGTATCTGTAGGAAAATGCATTAATGCGAAGCTGAAGAAGGATCATGATCATCGTACTAAGGATGGTGAGGTTGGTGGCAAGCCGGCCTGGCTTCGACCAAATATCCTGTTTAAGGAAGGTGCTAGTGAATCATACAGATATTATGATCTGCCATTCTGCATACCAGATCATGTGAAATTAGAAGAAAATAAGGAAGATGTAGGTGAAGTTTTAAATGGGGATCGACTCATGAGTGGTCCTTATGCACTCGATTTCTTGGTAGATAAAGACTCGGAAATTCTTTGTCGAAAGAAGTTAACAAAGGATGAAGTTGCTCAGTTTCGAAGAGCAGTCGATAAGGACTATTACTTTGAGATGTACTACGATGAGTTGCCCATATGGGGCCTTATCGGAAGAGTTGAGAATAGGGAAGTGACAGAGGATACAAAATATTACAGCTACTTTCTATACAAACACATACATTTCGATATCCACTATAATAGGGACCGTGTTATTGAGATCACTGCACGAATGGATCCACATTCTGTTTTGGACCTGACAGAGGATAGGGAAGTCGATGCTGAGTTCACATACACTGCGAAATGGAAGGGAACGGATATTCTGTTTGAGAATCGGATGGATAAGTTCCTGCAGACTACTCTACCGCATATCCATTGGTTCTCGATTATCAATTCTTGTGTCACTGTCCTCCTTTTAACCGGCTTCCTTGCCACGATTCTTATGCGAGTCCTTAAGAATGATTTTGTCAAGTATGCACATGATGAAGAAGCAGTTAACGATCAAGAGGAGACAGGATGGAAGTACATACACGGTGATGTCTTTAGGTTCCCGAAACACAAATCATTGTTTGCTGCAGCACTCGGTTGTGGTGCTCAGCTCTTTACATTGACAATTTTTATATTCCTGATGGCGCTTGTCGGGGTGTTTTATCCTTACAATAGAGGAGCTCTATTCACTGCCCTGCTGGTTATATATGCACTCACTTCTGGCGTTGGTGGATACACATCAACCTCTTTCTATTGCCAGCTTGAAGGAACTAATTGGGTAAAGAATCTGATCTGGACAGGATGTCTCTTCTTTGGGCCTCTCGCGTTAACGTTCTGCTTTCTCAATTCTGTTGCAGTTAGTTATAGTTCTAGTGCTGCTCTACCATTCAATACAATTATGTTAATAGTACTTATGTTGACATTAGTGACATCTCCACTGCTCGTATTAGGCGGAATTGCTGGCAAAAATAGCAGAACAAATTTCCAAGCTCCATGTCGAACCACAAAGTATCCCAGAGAAATTCCAGTACTCCCTTGGTACTGTAGCACCATCCCTCAGATGGCAATGACAGGGTTCTTACCATTTAGTGCCATCTACGTCGAGCTTTATTACATATTTGAAAGTGTATGGGGTCAAAAAATCTACACAATTTACAGCATGTTGTTTATAGTCTTTGTTCTTCTGCTGATAGTAACCGTGTTTGTCACTGTTGCATCGACTTATTTCCAACTAGCCGCGGAAGATCATAAATGGTGGTGGAGGTCGTTTCTCTGTGGTGGATCAACTGGCCTATTTATCTACACCTATTGCTTGTACTACTACGCGAGATCAGGCATGTCTGGTTTCATGCAAACCTCGTGTTTCTTCGGATACATGGCTTGCATATGCTATGGTTTCTTCCTCATGTTCGGGACCATTGGTTTCCGCGCATCATTGCTCTTTGTTCGTCACATTTATCGATCAATCAAGTGTGAGTAAACAACACTATAGACTATATATAGTTAAAGGTGTATATTTGTGTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g005030.2.1SL2.50ch01:47030..542321,153+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g005030.2SL2.50ch01:47011..542767,266+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g005030.2.1.1SL2.50ch01:47011..47390380+n/a
exonexon:Solyc01g005030.2.1.10SL2.50ch01:54016..54276261+n/a
exonexon:Solyc01g005030.2.1.2SL2.50ch01:48014..4810592+n/a
exonexon:Solyc01g005030.2.1.3SL2.50ch01:48439..48912474+n/a
exonexon:Solyc01g005030.2.1.4SL2.50ch01:49025..49936912+1
exonexon:Solyc01g005030.2.1.5SL2.50ch01:51317..5135741+1
exonexon:Solyc01g005030.2.1.6SL2.50ch01:51523..52105583+1
exonexon:Solyc01g005030.2.1.7SL2.50ch01:52271..52408138+2
exonexon:Solyc01g005030.2.1.8SL2.50ch01:52498..52654157+1
exonexon:Solyc01g005030.2.1.9SL2.50ch01:53171..53655485+1
intronintron:Solyc01g005030.2.1.1SL2.50ch01:47391..48013n/a+n/a
intronintron:Solyc01g005030.2.1.2SL2.50ch01:48106..48438n/a+n/a
intronintron:Solyc01g005030.2.1.3SL2.50ch01:48913..49024n/a+n/a
intronintron:Solyc01g005030.2.1.4SL2.50ch01:49937..51316n/a+n/a
intronintron:Solyc01g005030.2.1.5SL2.50ch01:51358..51522n/a+n/a
intronintron:Solyc01g005030.2.1.6SL2.50ch01:52106..52270n/a+n/a
intronintron:Solyc01g005030.2.1.7SL2.50ch01:52409..52497n/a+n/a
intronintron:Solyc01g005030.2.1.8SL2.50ch01:52655..53170n/a+n/a
intronintron:Solyc01g005030.2.1.9SL2.50ch01:53656..54015n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17666110%2Fdetails feature 17666110
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