BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= lgn_153372
         (719 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56940.1                                                           212   1e-55
At4g34620.1                                                           141   3e-34
At3g24550.1                                                            28   3.9  
At3g30630.1                                                            28   3.9  
At1g49490.1                                                            27   8.7  

>At5g56940.1
          Length = 136

 Score =  212 bits (540), Expect = 1e-55
 Identities = 98/115 (85%), Positives = 108/115 (93%)
 Frame = +2

Query: 77  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 256
           MVVR+RLSRFGCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL FDR+K
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 257 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPES 421
           YWLSVGAQPSDPVQRLLFR+G+LPPPPM+AMG+KGG RDTR VDPMTGR    E+
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAEN 115


>At4g34620.1
          Length = 114

 Score =  141 bits (356), Expect = 3e-34
 Identities = 63/111 (56%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 77  MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 256
           M V++RL+R GCK++PFYRV+ AD +S RDGK +EVLG+Y+PL G++   R+ L FDR+K
Sbjct: 1   MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIK 60

Query: 257 YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDT-RLVDPMTGRI 406
           YWLSVGAQP+D V+ +LFRAG++PP PM+ +G K G + T + V P+TG I
Sbjct: 61  YWLSVGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEI 111


>At3g24550.1
          Length = 653

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
 Frame = +2

Query: 152 RSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLKYWLSVGA-QPSD---------PVQR 301
           +  R  +H +   YY P P   G K  G    + +YW    A +PSD         P   
Sbjct: 163 KKKRRRRHDDEAAYYVPPPPPSGPKAGGPYGGQQQYWQQQNASRPSDNHVVTSLPPPKPP 222

Query: 302 LLFRAGVLPPPPMLAMGQKGG 364
              R    PPPP   M   GG
Sbjct: 223 SPPRKPPPPPPPPAFMSSSGG 243


>At3g30630.1
          Length = 786

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
 Frame = +2

Query: 164 DGKHLEVLGYYNPLPGQDGGKRMGLNFDRLKYWLSVGAQPSD---PVQRLLFRAG--VLP 328
           +G  LE + Y N   G  G      N   L Y  +  A P D   P QR    +G     
Sbjct: 274 EGNQLEEVSYINNQSGYKGYNNFKTNNPNLSYRSTNIANPQDQVYPPQRQQAISGNYQQQ 333

Query: 329 PPPMLAMGQKGGP 367
           PPP  A  Q  GP
Sbjct: 334 PPPRFAPQQHQGP 346


>At1g49490.1
          Length = 848

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +2

Query: 326 PPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAVPTVGSEVDEDK 469
           PPPP  +           +  P   +  TP S  + VPT  SE D+ +
Sbjct: 632 PPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQ 679


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,347,685
Number of Sequences: 28581
Number of extensions: 330394
Number of successful extensions: 768
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,141,370
effective HSP length: 97
effective length of database: 9,369,013
effective search space used: 1330399846
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cangn_197233
         (615 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56940.1                                                           120   2e-46
At4g34620.1                                                            87   7e-27
At1g57943.1                                                            27   6.7  

>At5g56940.1
          Length = 136

 Score =  120 bits (301), Expect(2) = 2e-46
 Identities = 54/66 (81%), Positives = 60/66 (90%)
 Frame = +3

Query: 108 MVVSLRLLRFGCKNKPFYRVMGADSRSPRDGKHLEVLGYYNPLPDQDGGKRIGLNFYRLK 287
           MVV +RL RFGCKN+PF+RVM ADSRSPRDGKHLEVLGY+NPLP QDGGKR+GL F R+K
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 288 YWLSVG 305
           YWLSVG
Sbjct: 61  YWLSVG 66



 Score = 82.8 bits (203), Expect(2) = 2e-46
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = +1

Query: 301 LAAQPSEPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRIMTSES 453
           + AQPS+PVQRLLFR+G+LPPPPM+AMG+KGG RDTR VDPMTGR + +E+
Sbjct: 65  VGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAEN 115


>At4g34620.1
          Length = 114

 Score = 87.4 bits (215), Expect(2) = 7e-27
 Identities = 38/66 (57%), Positives = 50/66 (75%)
 Frame = +3

Query: 108 MVVSLRLLRFGCKNKPFYRVMGADSRSPRDGKHLEVLGYYNPLPDQDGGKRIGLNFYRLK 287
           M V +RL R GCK++PFYRV+ AD +S RDGK +EVLG+Y+PL  ++   R+ L F R+K
Sbjct: 1   MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIK 60

Query: 288 YWLSVG 305
           YWLSVG
Sbjct: 61  YWLSVG 66



 Score = 50.4 bits (119), Expect(2) = 7e-27
 Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = +1

Query: 301 LAAQPSEPVQRLLFRAGVLPPPPMLAMGQKGGPRDT-RLVDPMTGRIM 441
           + AQP++ V+ +LFRAG++PP PM+ +G K G + T + V P+TG I+
Sbjct: 65  VGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEIL 112


>At1g57943.1
          Length = 399

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +3

Query: 168 MGADSRSPRDGKHLEVLGYYNPLPDQDGGKRIGLNFYRLKYWLSVGCTAF 317
           M     S +  +H E     NP PDQ    R  L   + K+W+SV    F
Sbjct: 1   MEMSKASKQTTRHEESEHVQNPEPDQILSPRRSLELKQRKWWISVSLCLF 50


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,780,527
Number of Sequences: 28581
Number of extensions: 288263
Number of successful extensions: 725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,141,370
effective HSP length: 95
effective length of database: 9,426,175
effective search space used: 1027453075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_131510
         (509 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56940.1                                                           210   4e-55
At4g34620.1                                                           140   4e-34
At3g17950.1                                                            30   0.95 
At2g32850.1                                                            29   1.2  
At2g32850.2                                                            29   1.2  
At2g24960.1                                                            27   6.2  
At3g28880.1                                                            27   6.2  
At5g03230.1                                                            27   8.1  
At5g24190.1                                                            27   8.1  
At5g66950.1                                                            27   8.1  
At3g25850.1                                                            27   8.1  

>At5g56940.1
          Length = 136

 Score =  210 bits (534), Expect = 4e-55
 Identities = 100/137 (72%), Positives = 117/137 (85%)
 Frame = +2

Query: 83  MAVRIRLSRFGCRNKPFYRAMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 262
           M VRIRLSRFGC+N+PF+R MAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL FDR+K
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 263 YWLSVGAQPSETVQRLLFRSGVLPPPPMLAMGRKGGPKDTRWVDPMTGRVFASEPSKNAN 442
           YWLSVGAQPS+ VQRLLFRSG+LPPPPM+AMGRKGG +DTR VDPMTGR   +E     N
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAE-----N 115

Query: 443 PKSDSNDDKVDEDESAA 493
              ++ND++  E+++ A
Sbjct: 116 KTVNANDNQPKEEDTEA 132


>At4g34620.1
          Length = 114

 Score =  140 bits (353), Expect = 4e-34
 Identities = 61/111 (54%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 83  MAVRIRLSRFGCRNKPFYRAMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 262
           M V+IRL+R GC+++PFYR + AD +S RDGK +EVLG+Y+PL G++   R+ L FDR+K
Sbjct: 1   MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIK 60

Query: 263 YWLSVGAQPSETVQRLLFRSGVLPPPPMLAMGRKGGPKDT-RWVDPMTGRV 412
           YWLSVGAQP++TV+ +LFR+G++PP PM+ +G K G K T + V P+TG +
Sbjct: 61  YWLSVGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEI 111


>At3g17950.1
          Length = 212

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 178 LAVSRRSAIGGHRPVERLVPAPKPRQPYPHRHFSFFKFSKD 56
           +A+SR S+    R  +R  P     +P PHR   +++F +D
Sbjct: 64  VAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRD 104


>At2g32850.1
          Length = 651

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 20/69 (28%), Positives = 24/69 (34%)
 Frame = +2

Query: 278 GAQPSETVQRLLFRSGVLPPPPMLAMGRKGGPKDTRWVDPMTGRVFASEPSKNANPKSDS 457
           G+  S T      R    PPPP       GGP    W          SE +KN  PK D 
Sbjct: 321 GSSKSATKPSPAPRRSPPPPPPSSGESDSGGPLGAFWATQHAKTSVVSEDNKNM-PKFDE 379

Query: 458 NDDKVDEDE 484
            +    + E
Sbjct: 380 PNSNTSKSE 388


>At2g32850.2
          Length = 671

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 20/69 (28%), Positives = 24/69 (34%)
 Frame = +2

Query: 278 GAQPSETVQRLLFRSGVLPPPPMLAMGRKGGPKDTRWVDPMTGRVFASEPSKNANPKSDS 457
           G+  S T      R    PPPP       GGP    W          SE +KN  PK D 
Sbjct: 321 GSSKSATKPSPAPRRSPPPPPPSSGESDSGGPLGAFWATQHAKTSVVSEDNKNM-PKFDE 379

Query: 458 NDDKVDEDE 484
            +    + E
Sbjct: 380 PNSNTSKSE 388


>At2g24960.1
          Length = 798

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 403 CHWINPPCILWSSFSSHC 350
           C  I PPCI W+    HC
Sbjct: 524 CSNIGPPCIEWTRVMDHC 541


>At3g28880.1
          Length = 763

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 415 KNTSCHWINPPCILWSSFSSHCQHRWW 335
           K   C W N   I W++F   C+H+ W
Sbjct: 668 KEGMCFWCNKNMIRWANFP--CRHKLW 692


>At5g03230.1
          Length = 167

 Score = 26.6 bits (57), Expect = 8.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 395 PMTGRVFASEPSKNANPKSDSNDDKVDEDES 487
           P   ++  SE   +A P  DS+DD  D+D+S
Sbjct: 84  PDWSKILKSEYRGHAIPDDDSDDDDEDDDDS 114


>At5g24190.1
          Length = 246

 Score = 26.6 bits (57), Expect = 8.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 370 SSFSSHCQHRWWRQHS*SEKKTLNSLGR 287
           SS ++H  H+WW Q S   K   N L R
Sbjct: 211 SSMAAHGLHQWWEQDSVLRKNWKNCLIR 238


>At5g66950.1
          Length = 871

 Score = 26.6 bits (57), Expect = 8.1
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +2

Query: 158 RSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSETVQRLLFRSGV 328
           RS  DG+H  ++  Y P    + G  +  N   +K     G    E VQ+L  R G+
Sbjct: 731 RSDSDGEHKNLVQIYGPKIKYERGSSVAFNIRDLK----SGMVHPEIVQKLAEREGI 783


>At3g25850.1
          Length = 259

 Score = 26.6 bits (57), Expect = 8.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 341 PMLAMGRKGGPKDTRWVDPMTGRVFASEPSKNANPKSDSNDDKVDEDESA 490
           P LA   K   KD  W     G+ F +EP +    + + + +K  ED+S+
Sbjct: 206 PSLAFHLKCAMKDDVW----DGKEFEAEPKEELEDELEDDSEKEIEDDSS 251


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,997,915
Number of Sequences: 28581
Number of extensions: 307233
Number of successful extensions: 1080
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,141,370
effective HSP length: 93
effective length of database: 9,483,337
effective search space used: 720733612
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At5g56940.1
         (408 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56940.1                                                           280   1e-76
At4g34620.1                                                           143   4e-35
At4g19390.1                                                            33   0.053
At5g49320.1                                                            29   1.00 
At4g00920.1                                                            28   1.7  
At1g20900.1                                                            27   2.9  
At5g50280.1                                                            27   3.8  
At3g51580.1                                                            27   3.8  
At3g24550.1                                                            27   3.8  
At1g24300.1                                                            27   4.9  
At4g39740.1                                                            26   6.5  
At2g13310.1                                                            26   6.5  
At1g61080.1                                                            26   6.5  
At2g29800.1                                                            26   8.4  

>At5g56940.1
          Length = 136

 Score =  280 bits (717), Expect = 1e-76
 Identities = 135/135 (100%), Positives = 135/135 (100%)
 Frame = +1

Query: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 180
           MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK
Sbjct: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 60

Query: 181 YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNA 360
           YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNA
Sbjct: 61  YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNA 120

Query: 361 NDNQPKEEDTEAKSA 405
           NDNQPKEEDTEAKSA
Sbjct: 121 NDNQPKEEDTEAKSA 135


>At4g34620.1
          Length = 114

 Score =  143 bits (360), Expect = 4e-35
 Identities = 65/113 (57%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIK 180
           M V+IRL+R GCK+RPF+RV+ AD +S RDGK +EVLG+++PL G++   R+ LKFDRIK
Sbjct: 1   MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIK 60

Query: 181 YWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDT-RPVDPMTGRYVD 336
           YWLSVGAQP+D V+ +LFR+GL+PP PMV +G K G + T + V P+TG  ++
Sbjct: 61  YWLSVGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEILN 113


>At4g19390.1
          Length = 274

 Score = 33.1 bits (74), Expect = 0.053
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 2   WLYVSDCRDLDAKIGHFLGLWLLIADLQETGSILRS*VTSILCQARTVVRGWVSSSIELS 181
           WL V    +L  K+GH + + LLI    ++  ++ + VT +LC         +S SI  S
Sbjct: 209 WLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLC---------ISVSIFFS 259

Query: 182 TGYLLVLS 205
           +  L +LS
Sbjct: 260 SACLFLLS 267


>At5g49320.1
          Length = 258

 Score = 28.9 bits (63), Expect = 1.00
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 369 VIIGINCFILCIHI-ATSHRINWACVSC 289
           +I G++CF+LC++  AT  +  W   +C
Sbjct: 36  IIFGLSCFVLCLYAEATRSQATWGSKTC 63


>At4g00920.1
          Length = 315

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 98  CFPSLGDLLSAAITLKNGRFLHPNLDSLIRTT 3
           CFPS G++  +A+ +K G   +  +DSLI  T
Sbjct: 49  CFPSFGNITISALKVKCGGQFYHLVDSLILNT 80


>At1g20900.1
          Length = 312

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -2

Query: 320 VIGSTGRVSRAPPLRPIATIGGGGSKPDLNRRR*TGSDG*APTDNQYLIRSNLRPILLPP 141
           V+G  G VS     +P+    GGG          +G  G      ++ I S    +L PP
Sbjct: 143 VLGGNGTVSNVTLRQPVTPGNGGGV---------SGGGGVVTLHGRFEILSLTGTVLPPP 193

Query: 140 SWPGKG 123
           + PG G
Sbjct: 194 APPGAG 199


>At5g50280.1
          Length = 724

 Score = 26.9 bits (58), Expect = 3.8
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
 Frame = +1

Query: 214 PVQRLLFRSGLLPPPPMVAMGRKGGARDTRPV------DPMTGRYVDAENKTVNANDNQP 375
           PV  LL RS     P  ++      +  +  +      D +  +    EN T+N+ +++ 
Sbjct: 26  PVPYLLLRSSFFRKPLSLSATSPSSSSSSPSIFLSCFDDALPDKIQQPENSTINSEESEC 85

Query: 376 KEEDTE 393
           +EED E
Sbjct: 86  EEEDDE 91


>At3g51580.1
          Length = 391

 Score = 26.9 bits (58), Expect = 3.8
 Identities = 15/67 (22%), Positives = 25/67 (37%)
 Frame = +1

Query: 121 NPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDT 300
           NP P  DG   +      +    S    P +P         + PPPP++ +  K   +  
Sbjct: 50  NPQPIGDGKSNVTSSEPTLPTSNSTNTNPKEP-------DSMSPPPPLIPVNEKNDTKVL 102

Query: 301 RPVDPMT 321
              +PM+
Sbjct: 103 NTTEPMS 109


>At3g24550.1
          Length = 653

 Score = 26.9 bits (58), Expect = 3.8
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
 Frame = +1

Query: 76  RSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGA-QPSD---------PVQR 225
           +  R  +H +   Y+ P P   G K  G    + +YW    A +PSD         P   
Sbjct: 163 KKKRRRRHDDEAAYYVPPPPPSGPKAGGPYGGQQQYWQQQNASRPSDNHVVTSLPPPKPP 222

Query: 226 LLFRSGLLPPPPMVAMGRKGGA 291
              R    PPPP   M   GG+
Sbjct: 223 SPPRKPPPPPPPPAFMSSSGGS 244


>At1g24300.1
          Length = 1418

 Score = 26.6 bits (57), Expect = 4.9
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +1

Query: 244 LLPPPPMVAMGRKGGARDTRPVDPMTGRYVD 336
           LLP     AMG   GA D RP+D      VD
Sbjct: 616 LLPNRSYDAMGEPTGAIDNRPIDSRRNTQVD 646


>At4g39740.1
          Length = 277

 Score = 26.2 bits (56), Expect = 6.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 105 LKMLPVSWRSAISSHNPKKWPIFASKSRQSDTYNH 1
           LKM+  +     S HN K  P+F +   Q DT +H
Sbjct: 156 LKMMSKAVDKLESKHNEKILPVFVTLDPQRDTPSH 190


>At2g13310.1
          Length = 447

 Score = 26.2 bits (56), Expect = 6.5
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 256 PPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDNQPKEEDTEAKSA 405
           PP+ AM R+G +  TRP        V A    V     Q   E T A +A
Sbjct: 391 PPLAAMLRRGSSTQTRP--------VSANEPPVATAPEQQANEKTAAAAA 432


>At1g61080.1
          Length = 908

 Score = 26.2 bits (56), Expect = 6.5
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +1

Query: 205 PSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTG 324
           P  P   +   +G  PPPP   M    GA    P  P  G
Sbjct: 590 PPPPPPPMPLANGATPPPPPPPMAMANGAAGPPPPPPRMG 629


>At2g29800.1
          Length = 415

 Score = 25.8 bits (55), Expect = 8.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 274 GRKGGARDTRPVDPMTGRYVDAENKTVNANDNQPKEED 387
           G  GG  + +P +P      + EN+  N N N+  EED
Sbjct: 11  GSNGGVPNQKPEEPHKNPQEEKENQ--NENPNEADEED 46


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,162,107
Number of Sequences: 28581
Number of extensions: 218510
Number of successful extensions: 642
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,141,370
effective HSP length: 89
effective length of database: 9,597,661
effective search space used: 441492406
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)