BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_145123 (847 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g51040.1 231 3e-61 At1g59900.1 34 0.12 At5g08580.1 33 0.16 At4g29100.1 30 1.7 At5g51590.1 30 2.2 At3g12380.1 30 2.2 At1g62540.1 30 2.2 At1g62560.1 29 2.9 At1g73880.1 29 2.9 At4g01990.1 28 5.0 At5g13970.1 28 6.5 At3g47500.1 28 6.5 At5g25280.2 28 6.5 At5g25280.1 28 6.5 At4g31970.1 28 8.5 At5g05570.1 28 8.5 At1g62600.1 28 8.5 >At5g51040.1 Length = 189 Score = 231 bits (590), Expect = 3e-61 Identities = 113/185 (61%), Positives = 139/185 (75%), Gaps = 6/185 (3%) Frame = +3 Query: 57 RALLFTIPRIINSSKTASVATSTLQSHN-----LYRPLAGTFSRFISSNETSSP-MNIDL 218 R L + RII S+ ++ + N ++R +RF N S+ +IDL Sbjct: 4 RKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLGARFFCENTASAQNFDIDL 63 Query: 219 SDEESKRRLFNRLIYRSKQRGYLELDLVLGKWVEEHIQSMDENGIKSLVHVLDLENPDLW 398 S+EE+KRR NRL+YRSKQRG+LELDLVLG WVEE++ SMDENG+KSL+HVL+LENPDLW Sbjct: 64 SNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENPDLW 123 Query: 399 KWLTGQEQPPDAISTNPVFSAVHEKVMNNLNNHTSPETRAVPGKPWVRGWDDIKRGRDAP 578 KWLT QEQPP+A+S+NPVFSA+HEKVM NLN H +PETRA G+PWVRGWDD KRGRDAP Sbjct: 124 KWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGRDAP 183 Query: 579 IAGNQ 593 I+GNQ Sbjct: 184 ISGNQ 188 >At1g59900.1 Length = 390 Score = 33.9 bits (76), Expect = 0.12 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +1 Query: 79 LESSIPLKQHLLQPPHSSLTISTGL*LEHFRVLFLLMRLHRR*ISIFPTKRAKDVC 246 +E+S+P HL PP S+ S+ L+ FR + L+ R+ S++ K + C Sbjct: 34 IETSLPFTAHLCDPPSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFC 89 >At5g08580.1 Length = 392 Score = 33.5 bits (75), Expect = 0.16 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 15/82 (18%) Frame = +3 Query: 303 LGKWVEEHIQSMDENG--------IKSLVHVLDLENPDLWKWLTGQE------QPPDAIS 440 +G W EEH + D NG +H D +NP L WL +E IS Sbjct: 211 MGWWKEEHFNASDANGDGLLNLTEFNDFLHPADTKNPKLLLWLCKEEVRERDSDKDGKIS 270 Query: 441 TNPVFSAVHEKVMN-NLNNHTS 503 F + + V N +NH S Sbjct: 271 FEEFFHGLFDTVRNYEEDNHNS 292 >At4g29100.1 Length = 408 Score = 30.0 bits (66), Expect = 1.7 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Frame = +3 Query: 384 NPDLWKWLTGQEQPPDAISTNPVF-------SAVHEKVMNNLNNHTSPETRAVPGKPWVR 542 NP+L WL + PP++ S + + ++MN+ N+H + GK + Sbjct: 86 NPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEERLEMMNHHNHHDEQQHHGFQGKIRLE 145 Query: 543 GWDD 554 W++ Sbjct: 146 NWEE 149 >At5g51590.1 Length = 420 Score = 29.6 bits (65), Expect = 2.2 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = +3 Query: 423 PPDAISTNPVFSAVHEKVMNNLNNHTSPETRAVPGKPWVRGWDDIKRGRDAPIAGN 590 PP + S P + VH NN NH ++PG+ DD++ D G+ Sbjct: 355 PPVSFSHEPSTNTVHGYYANNTANHIKDLFSSLPGEDREEDEDDLEGEDDEEFGGH 410 >At3g12380.1 Length = 591 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = -2 Query: 474 PFHAQ----QKTQDLCLLHLGVAPDQSATSTNLDSPGQGHEQGT*FHFHPWIVYVPPP 313 PFH+ +K +DL L H +APD ++ + E+ T + PWI PPP Sbjct: 85 PFHSSRFTWEKAEDLKLEHCYIAPDYASEIRLFQEGRKEAEEKTSYWQLPWI---PPP 139 >At1g62540.1 Length = 458 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = +3 Query: 363 VHVLDLENPDLWKWLTGQEQPPDAISTNPVFSAVHEKVMNNLNNHTSPETRAVPGKPWVR 542 V VL+ E W+ + D +S +P S VH V +L + E P+V Sbjct: 36 VVVLEREKEVGGLWIYSPKAESDPLSLDPTRSIVHSSVYESLRTNLPRECMGFTDFPFVP 95 Query: 543 GWDDIKR 563 +DD R Sbjct: 96 RFDDESR 102 >At1g62560.1 Length = 463 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/54 (25%), Positives = 25/54 (46%) Frame = +3 Query: 402 WLTGQEQPPDAISTNPVFSAVHEKVMNNLNNHTSPETRAVPGKPWVRGWDDIKR 563 W+ + D +S +P S VH + +L + E+ V P++ +DD R Sbjct: 49 WVYTPKSDSDPLSLDPTRSKVHSSIYESLRTNVPRESMGVRDFPFLPRFDDESR 102 >At1g73880.1 Length = 474 Score = 29.3 bits (64), Expect = 2.9 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 321 EHIQSMDENGIKSLVHVLDLENPDLWKWLTGQEQPPDAI 437 E++Q + +G ++H L + L W+T PP AI Sbjct: 86 ENVQDLPPSGFPLMIHALGNLHAPLISWITSHPSPPVAI 124 >At4g01990.1 Length = 503 Score = 28.5 bits (62), Expect = 5.0 Identities = 16/87 (18%), Positives = 36/87 (41%) Frame = +3 Query: 255 LIYRSKQRGYLELDLVLGKWVEEHIQSMDENGIKSLVHVLDLENPDLWKWLTGQEQPPDA 434 L+ K++ D+ W++ D +G++ ++ + E ++ W T Sbjct: 197 LVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIY 256 Query: 435 ISTNPVFSAVHEKVMNNLNNHTSPETR 515 I A E+ + +L N+ +P+ R Sbjct: 257 IKVGLYGKA--EEALKSLENNMNPDVR 281 >At5g13970.1 Length = 405 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 294 DLVLGKWVEEHIQSMDENGIKSLV 365 D +LG + E H+ S DENG+K ++ Sbjct: 202 DNLLGAFKESHVGSSDENGLKPIL 225 >At3g47500.1 Length = 449 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +3 Query: 459 AVHEKVMNNLNNHTSPETRAVPGKPWVRGWD 551 +V E MNN NN+ +PG PW W+ Sbjct: 270 SVVEAQMNNNNNNNMNGYACIPGVPWPYTWN 300 >At5g25280.2 Length = 221 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -1 Query: 664 SNNESLYKTTNQFFFDTFKQKNNYWFPAIGASRPLLISSHPLTQGF 527 S+ S + + + FF + Q N++ + +R L +S P+TQ F Sbjct: 46 SSTSSSFSSPSTAFFSSHNQNNHHQHRSASPTRVNLFTSAPMTQSF 91 >At5g25280.1 Length = 221 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -1 Query: 664 SNNESLYKTTNQFFFDTFKQKNNYWFPAIGASRPLLISSHPLTQGF 527 S+ S + + + FF + Q N++ + +R L +S P+TQ F Sbjct: 46 SSTSSSFSSPSTAFFSSHNQNNHHQHRSASPTRVNLFTSAPMTQSF 91 >At4g31970.1 Length = 524 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 270 KQRGYLELDLVLGKWVEEHIQSMDENGIK 356 KQ G ELD++L +W+E H Q +G K Sbjct: 253 KQTGR-ELDVILERWIENHRQQRKVSGTK 280 >At5g05570.1 Length = 1125 Score = 27.7 bits (60), Expect = 8.5 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 57 FANSPFLLCSEQLVKLY 7 FANS FL+CSE ++LY Sbjct: 798 FANSLFLMCSEDALRLY 814 >At1g62600.1 Length = 453 Score = 27.7 bits (60), Expect = 8.5 Identities = 16/57 (28%), Positives = 23/57 (40%) Frame = +3 Query: 402 WLTGQEQPPDAISTNPVFSAVHEKVMNNLNNHTSPETRAVPGKPWVRGWDDIKRGRD 572 W+ PD +S +P S VH V +L + E P+V D+ RD Sbjct: 49 WIYTDHIEPDPLSVDPTRSVVHSSVYGSLRTNLPRECMGYRDFPFVIR-SDVSESRD 104 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,773,401 Number of Sequences: 28581 Number of extensions: 413336 Number of successful extensions: 1132 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1090 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1130 length of database: 12,141,370 effective HSP length: 99 effective length of database: 9,311,851 effective search space used: 1694756882 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_176660 (763 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g51040.1 225 2e-59 At5g08580.1 33 0.23 At4g29100.1 32 0.39 At1g29300.1 32 0.39 At1g59900.1 32 0.51 At3g12380.1 30 1.5 At1g73880.1 29 2.5 At3g06580.1 29 3.3 At4g01990.1 28 4.3 At5g13970.1 28 5.6 At3g47500.1 28 5.6 At5g65820.1 28 7.3 At4g31970.1 28 7.3 At4g31950.1 27 9.6 At4g31940.1 27 9.6 At4g31530.1 27 9.6 At4g09020.1 27 9.6 At3g30170.1 27 9.6 >At5g51040.1 Length = 189 Score = 225 bits (574), Expect = 2e-59 Identities = 110/185 (59%), Positives = 138/185 (74%), Gaps = 6/185 (3%) Frame = +1 Query: 139 RALLFTIPRIINSSKTASVATSTLPSHN-----LYRPLAGTFSRFISSNETSSP-MNINL 300 R L + RII S+ ++ + N ++R +RF N S+ +I+L Sbjct: 4 RKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLGARFFCENTASAQNFDIDL 63 Query: 301 SDEESKRRLFNRLIYRSKQRGYLELDLVLGKWVEEHIQSMDENGIKSLVHVLDLENPDLW 480 S+EE+KRR NRL+YRSKQRG+LELDLVLG WVEE++ SMDENG+KSL+HVL+LENPDLW Sbjct: 64 SNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENPDLW 123 Query: 481 KWLTGQEQPPDAISTNPVFSAVREKVMNNLNNHTSPETRAVPGKPWVRGWDDIKKGRDAP 660 KWLT QEQPP+A+S+NPVFSA+ EKVM NLN H +PETRA G+PWVRGWDD K+GRDAP Sbjct: 124 KWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGRDAP 183 Query: 661 IAGNQ 675 I+GNQ Sbjct: 184 ISGNQ 188 >At5g08580.1 Length = 392 Score = 32.7 bits (73), Expect = 0.23 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%) Frame = +1 Query: 385 LGKWVEEHIQSMDENG--------IKSLVHVLDLENPDLWKWLTGQE 501 +G W EEH + D NG +H D +NP L WL +E Sbjct: 211 MGWWKEEHFNASDANGDGLLNLTEFNDFLHPADTKNPKLLLWLCKEE 257 >At4g29100.1 Length = 408 Score = 32.0 bits (71), Expect = 0.39 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Frame = +1 Query: 466 NPDLWKWLTGQEQPPDAISTNPVF-------SAVREKVMNNLNNHTSPETRAVPGKPWVR 624 NP+L WL + PP++ S + + R ++MN+ N+H + GK + Sbjct: 86 NPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEERLEMMNHHNHHDEQQHHGFQGKIRLE 145 Query: 625 GWDD 636 W++ Sbjct: 146 NWEE 149 >At1g29300.1 Length = 460 Score = 32.0 bits (71), Expect = 0.39 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = -3 Query: 209 SVEVATDAVLEELMIRGMVKRSALRKFAIFSLQKATTLSSIEDQWKL 69 +++ A AV+EEL +KRS LRK S Q A L+ I++Q L Sbjct: 117 AIQAADTAVVEELRALSELKRSFLRKELNLSPQVAIMLAEIQEQQSL 163 >At1g59900.1 Length = 390 Score = 31.6 bits (70), Expect = 0.51 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +2 Query: 161 LESSIPLKQHLLQPPHSRLTISTGL*LEHFRVLFLLMRLHRR*ISIFLTKRAKDVC 328 +E+S+P HL PP + S+ L+ FR + L+ R+ S++ K + C Sbjct: 34 IETSLPFTAHLCDPPSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFC 89 >At3g12380.1 Length = 591 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = -1 Query: 556 PFHAQ----QKTQDLCLLHLGVAPDQSATSTNLDSPGQGHEQGT*FHFRPWIVYVPPP 395 PFH+ +K +DL L H +APD ++ + E+ T + PWI PPP Sbjct: 85 PFHSSRFTWEKAEDLKLEHCYIAPDYASEIRLFQEGRKEAEEKTSYWQLPWI---PPP 139 >At1g73880.1 Length = 474 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 403 EHIQSMDENGIKSLVHVLDLENPDLWKWLTGQEQPPDAI 519 E++Q + +G ++H L + L W+T PP AI Sbjct: 86 ENVQDLPPSGFPLMIHALGNLHAPLISWITSHPSPPVAI 124 >At3g06580.1 Length = 497 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +1 Query: 157 IPRIINSSKTASVATSTLPSHNLYRPLAGTFSRFISSNETSSPMNINLSDEESKRRL 327 +P I+N+ T+ + L++ A +S + +N NLSDEE ++L Sbjct: 339 LPSIVNNDPTSLAVLNAATHFKLHQRAAHVYSEARRVHGFKDTVNSNLSDEEKLKKL 395 >At4g01990.1 Length = 503 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/87 (18%), Positives = 36/87 (41%) Frame = +1 Query: 337 LIYRSKQRGYLELDLVLGKWVEEHIQSMDENGIKSLVHVLDLENPDLWKWLTGQEQPPDA 516 L+ K++ D+ W++ D +G++ ++ + E ++ W T A Sbjct: 197 LVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLA--A 254 Query: 517 ISTNPVFSAVREKVMNNLNNHTSPETR 597 I E+ + +L N+ +P+ R Sbjct: 255 IYIKVGLYGKAEEALKSLENNMNPDVR 281 >At5g13970.1 Length = 405 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +1 Query: 376 DLVLGKWVEEHIQSMDENGIKSLV 447 D +LG + E H+ S DENG+K ++ Sbjct: 202 DNLLGAFKESHVGSSDENGLKPIL 225 >At3g47500.1 Length = 449 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +1 Query: 541 AVREKVMNNLNNHTSPETRAVPGKPWVRGWD 633 +V E MNN NN+ +PG PW W+ Sbjct: 270 SVVEAQMNNNNNNNMNGYACIPGVPWPYTWN 300 >At5g65820.1 Length = 638 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -2 Query: 564 VHNLFTHSRKHRICAYCIWGLLLTSQPLPQIWILQVKDMNKGLNSIF 424 +H LF+ + C+YCI + + P P + +K + K N F Sbjct: 542 IHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREF 588 >At4g31970.1 Length = 524 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 352 KQRGYLELDLVLGKWVEEHIQSMDENGIK 438 KQ G ELD++L +W+E H Q +G K Sbjct: 253 KQTGR-ELDVILERWIENHRQQRKVSGTK 280 >At4g31950.1 Length = 513 Score = 27.3 bits (59), Expect = 9.6 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 370 ELDLVLGKWVEEHIQSMDENGIK 438 ELD++L +W+E H Q +G K Sbjct: 247 ELDVILERWIENHRQQRKVSGTK 269 >At4g31940.1 Length = 525 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 352 KQRGYLELDLVLGKWVEEHIQSMDENGIK 438 KQ G ELD++L +W+E H Q +G K Sbjct: 254 KQTGS-ELDVILERWIENHRQQRKFSGTK 281 >At4g31530.1 Length = 325 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = -3 Query: 176 ELMIRGMVKRSALRKFAIFSLQKATTLSSIEDQWKLQI 63 +L++ ++KR+ + + L KAT L +D++ LQ+ Sbjct: 87 QLVVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQV 124 >At4g09020.1 Length = 765 Score = 27.3 bits (59), Expect = 9.6 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Frame = +1 Query: 214 SHNLYRPLAGTFSRFISSNETSS---PMNINLSDEESKRRLFNRLIYRSKQRGYLELDL- 381 S + Y P + FS +++ +SS PM + LS ++ R+F+R I K R L++ Sbjct: 7 SSSTYDPFSSNFSPSLTNAFSSSFTIPMGLKLSRRVTRARIFSRKI---KDRSTLKVTCR 63 Query: 382 -VLGKWVEEHIQSMDE 426 + VEE +M E Sbjct: 64 RAHERVVEEEASTMTE 79 >At3g30170.1 Length = 996 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = +1 Query: 349 SKQRGYLELDLVLGKW-VEEHI-QSMDENGIKSLVH----VLDLENPDLWKW 486 +KQR ++ LD KW ++ H+ ++ +G +V V+++EN D W W Sbjct: 403 AKQRPFIGLDGAFLKWDIKGHLLAAVGRDGDNKIVPIAWAVVEIENDDNWDW 454 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,971,484 Number of Sequences: 28581 Number of extensions: 401744 Number of successful extensions: 1101 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1099 length of database: 12,141,370 effective HSP length: 97 effective length of database: 9,369,013 effective search space used: 1461566028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_198037 (602 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g51040.1 232 1e-61 At5g08580.1 33 0.15 At5g36950.1 32 0.34 At1g59900.1 31 0.45 At1g73880.1 29 1.7 At3g12380.1 29 2.2 At5g02990.1 29 2.2 At5g42580.1 28 2.9 At4g34050.1 28 2.9 At1g80370.1 28 2.9 At1g51770.1 28 3.8 At5g13970.1 28 3.8 At4g31970.1 28 5.0 At4g31950.1 28 5.0 At1g62560.1 27 6.5 At4g31940.1 27 6.5 At3g30170.1 27 6.5 At1g64880.1 27 6.5 At4g01990.1 27 8.5 >At5g51040.1 Length = 189 Score = 232 bits (592), Expect = 1e-61 Identities = 106/143 (74%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +2 Query: 131 SRFLSSNEASSLN-NIDLSDEESKRRLFNRLIYRSKQRGYLELDLVLGKWVEEHIQSMDE 307 +RF N AS+ N +IDLS+EE+KRR NRL+YRSKQRG+LELDLVLG WVEE++ SMDE Sbjct: 46 ARFFCENTASAQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDE 105 Query: 308 NGIKSLVHVLDLENPDLWKWLTGQEQPPDAINTNPVFSAVHEKVMNNLDKHASPETRAVP 487 NG+KSL+HVL+LENPDLWKWLT QEQPP+A+++NPVFSA+HEKVM NL+KHA+PETRA Sbjct: 106 NGVKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAA 165 Query: 488 GKPWVRGWDDIKKGRDAPIAGNQ 556 G+PWVRGWDD K+GRDAPI+GNQ Sbjct: 166 GQPWVRGWDDFKRGRDAPISGNQ 188 >At5g08580.1 Length = 392 Score = 32.7 bits (73), Expect = 0.15 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%) Frame = +2 Query: 266 LGKWVEEHIQSMDENG--------IKSLVHVLDLENPDLWKWLTGQE 382 +G W EEH + D NG +H D +NP L WL +E Sbjct: 211 MGWWKEEHFNASDANGDGLLNLTEFNDFLHPADTKNPKLLLWLCKEE 257 >At5g36950.1 Length = 587 Score = 31.6 bits (70), Expect = 0.34 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = +2 Query: 113 PFAGTFSRFLSSNEASSLN---NIDLSDEESKRRLFNRLIYRSKQRG 244 PF SRF SS A+S N + LS S RR+ NR I R ++ G Sbjct: 50 PFPSHISRFCSSQSANSQNENRHTTLSSPVSSRRVNNRKISRRRKAG 96 >At1g59900.1 Length = 390 Score = 31.2 bits (69), Expect = 0.45 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +3 Query: 42 LESSIPPTGHLLQPPHSILTISTGLLLEHFRVFFLQMRL 158 +E+S+P T HL PP + S+ LL+ FR L R+ Sbjct: 34 IETSLPFTAHLCDPPSRSVESSSQELLDFFRTMALMRRM 72 >At1g73880.1 Length = 474 Score = 29.3 bits (64), Expect = 1.7 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +2 Query: 284 EHIQSMDENGIKSLVHVLDLENPDLWKWLTGQEQPPDAI 400 E++Q + +G ++H L + L W+T PP AI Sbjct: 86 ENVQDLPPSGFPLMIHALGNLHAPLISWITSHPSPPVAI 124 >At3g12380.1 Length = 591 Score = 28.9 bits (63), Expect = 2.2 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = -1 Query: 437 PFHAQ----QKTQDLYLLHLGVAPDQSATSTNPDSPGQGHEQGT*FHFRPWIVCVPPP 276 PFH+ +K +DL L H +APD ++ + E+ T + PWI PPP Sbjct: 85 PFHSSRFTWEKAEDLKLEHCYIAPDYASEIRLFQEGRKEAEEKTSYWQLPWI---PPP 139 >At5g02990.1 Length = 549 Score = 28.9 bits (63), Expect = 2.2 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = -2 Query: 592 IMSSYPRQKKELLIPSYRRISAFLDVIPPSHPRFSWNSTSLWRSMFVKVVHNLFMHSRKH 413 I+SS P+Q+K L IPS+ P HP++ ST L + ++ + R + Sbjct: 86 ILSSTPKQQKLLPIPSF----------PYQHPKY---STILLVDSLIYIIGGIVNRQRSN 132 Query: 412 RICI 401 R+ I Sbjct: 133 RVLI 136 >At5g42580.1 Length = 500 Score = 28.5 bits (62), Expect = 2.9 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 8/72 (11%) Frame = +3 Query: 51 SIPPTGHL-----LQPPHSI---LTISTGLLLEHFRVFFLQMRLPR*IILIFPMKRANDV 206 S+P GHL PH L+ G LL H R+F M L + + + R NDV Sbjct: 44 SLPIIGHLHHLLSSSLPHKSFQKLSFKYGPLL-HLRIFNFPMVLVSSASMAYEVFRTNDV 102 Query: 207 YLTDLFIVVNKE 242 ++ F+ VNK+ Sbjct: 103 NVSYRFVPVNKD 114 >At4g34050.1 Length = 260 Score = 28.5 bits (62), Expect = 2.9 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Frame = -2 Query: 601 YIVIMSSYPRQKKELLIPSYRRISAFLDVIPPSHPRFSWN--STSLWRSMFVKVVHNLFM 428 YI+ S YPR+ + + R ++A HP WN +TS F+ ++ L Sbjct: 44 YILETSVYPREPESM--KELREVTA-------KHP---WNIMTTSADEGQFLNMLIKLVN 91 Query: 427 HSRKHRICIYCIWGLLLTSQPLPQIRILQVKDMNK 323 I +Y + LL T+ LP+ + D+N+ Sbjct: 92 AKNTMEIGVYTGYSLLATALALPEDGKILAMDVNR 126 >At1g80370.1 Length = 462 Score = 28.5 bits (62), Expect = 2.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 203 VVCSLHRKDQYYSARKPHLKKENAKMFQQKACRD 102 ++CSL+ D YY+ R LK+ F +K RD Sbjct: 192 LLCSLYAPDIYYNLRVAELKRRPFPDFMEKTQRD 225 >At1g51770.1 Length = 400 Score = 28.1 bits (61), Expect = 3.8 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Frame = -2 Query: 556 LIPSYRRISAFLD--VIPPSHPRFSWNSTSL-WRSMFVKVVHNLFMHSRKHRICIYCIWG 386 L+ +Y S LD + PPS+ + N + L WR+ ++ N + R ++ Sbjct: 67 LLSTYNHESVTLDSFIRPPSNVWHTMNDSELLWRAS-IEPQRNGYPFRRVPKLAF----- 120 Query: 385 LLLTSQPLPQIRILQ-VKDMNKGLNSIFVHGLYVFLHPFSKNKV 257 + L PLP + + ++GL SI+VH L + FS++ V Sbjct: 121 MFLAKGPLPFAPLWEKFCKGHEGLYSIYVHSLPSYKSDFSRSSV 164 >At5g13970.1 Length = 405 Score = 28.1 bits (61), Expect = 3.8 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 257 DLVLGKWVEEHIQSMDENGIKSLV 328 D +LG + E H+ S DENG+K ++ Sbjct: 202 DNLLGAFKESHVGSSDENGLKPIL 225 >At4g31970.1 Length = 524 Score = 27.7 bits (60), Expect = 5.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 233 KQRGYLELDLVLGKWVEEHIQSMDENGIK 319 KQ G ELD++L +W+E H Q +G K Sbjct: 253 KQTGR-ELDVILERWIENHRQQRKVSGTK 280 >At4g31950.1 Length = 513 Score = 27.7 bits (60), Expect = 5.0 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = +2 Query: 137 FLSSNEASSLNNIDLSDEESKRRLFNRLIYRSKQRGYLELDLVLGKWVEEHIQSMDENGI 316 F S+ L +DL E + + R ELD++L +W+E H Q +G Sbjct: 220 FTVSDAFPKLGWLDLQGHEKEMKQTRR-----------ELDVILERWIENHRQQRKVSGT 268 Query: 317 K 319 K Sbjct: 269 K 269 >At1g62560.1 Length = 463 Score = 27.3 bits (59), Expect = 6.5 Identities = 15/58 (25%), Positives = 28/58 (48%) Frame = +2 Query: 365 WLTGQEQPPDAINTNPVFSAVHEKVMNNLDKHASPETRAVPGKPWVRGWDDIKKGRDA 538 W+ + D ++ +P S VH + +L + E+ V P++ +DD + RDA Sbjct: 49 WVYTPKSDSDPLSLDPTRSKVHSSIYESLRTNVPRESMGVRDFPFLPRFDD--ESRDA 104 >At4g31940.1 Length = 525 Score = 27.3 bits (59), Expect = 6.5 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 233 KQRGYLELDLVLGKWVEEHIQSMDENGIK 319 KQ G ELD++L +W+E H Q +G K Sbjct: 254 KQTGS-ELDVILERWIENHRQQRKFSGTK 281 >At3g30170.1 Length = 996 Score = 27.3 bits (59), Expect = 6.5 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Frame = +2 Query: 230 SKQRGYLELDLVLGKW-VEEHI-QSMDENGIKSLVH----VLDLENPDLWKW 367 +KQR ++ LD KW ++ H+ ++ +G +V V+++EN D W W Sbjct: 403 AKQRPFIGLDGAFLKWDIKGHLLAAVGRDGDNKIVPIAWAVVEIENDDNWDW 454 >At1g64880.1 Length = 516 Score = 27.3 bits (59), Expect = 6.5 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 143 SSNEASSLNNIDLSDEESKRRLFNRLIYRSKQ 238 SS+ S + IDL +E K +FN+ R K+ Sbjct: 143 SSDSDSEYDEIDLDEERKKEDIFNKKFQRHKE 174 >At4g01990.1 Length = 503 Score = 26.9 bits (58), Expect = 8.5 Identities = 15/87 (17%), Positives = 36/87 (41%) Frame = +2 Query: 218 LIYRSKQRGYLELDLVLGKWVEEHIQSMDENGIKSLVHVLDLENPDLWKWLTGQEQPPDA 397 L+ K++ D+ W++ D +G++ ++ + E ++ W T Sbjct: 197 LVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIY 256 Query: 398 INTNPVFSAVHEKVMNNLDKHASPETR 478 I A E+ + +L+ + +P+ R Sbjct: 257 IKVGLYGKA--EEALKSLENNMNPDVR 281 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,888,045 Number of Sequences: 28581 Number of extensions: 338613 Number of successful extensions: 1004 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1001 length of database: 12,141,370 effective HSP length: 95 effective length of database: 9,426,175 effective search space used: 989748375 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_119697 (809 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g51040.1 171 2e-47 At5g13970.1 31 0.73 At5g08580.1 30 2.1 At3g45970.1 30 2.1 At3g08960.1 30 2.1 At3g12140.2 29 2.8 At3g12140.1 29 2.8 At3g32940.1 29 3.6 At4g30400.1 28 4.7 At1g28380.1 28 4.7 At4g31950.1 28 6.1 At5g62640.1 28 6.1 At1g27730.1 28 8.0 At3g20740.1 28 8.0 At4g31970.1 28 8.0 >At5g51040.1 Length = 189 Score = 171 bits (434), Expect(2) = 2e-47 Identities = 80/119 (67%), Positives = 98/119 (82%), Gaps = 4/119 (3%) Frame = +1 Query: 154 SSNQALNIDLSNEESKRRLFNR----SKQRGFLELDLILGRWVEDHIHSMDENGIKALVH 321 +S Q +IDLSNEE+KRR NR SKQRGFLELDL+LG WVE++++SMDENG+K+L+H Sbjct: 54 ASAQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIH 113 Query: 322 VLDLENPDLWKWLTGQGQPPEAVRMNPVFADVQKRVMNNLNSHASPKTRATPGQPWVEG 498 VL+LENPDLWKWLT Q QPPEAV NPVF+ + ++VM NLN HA+P+TRA GQPWV G Sbjct: 114 VLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRG 172 Score = 35.4 bits (80), Expect(2) = 2e-47 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +3 Query: 498 GWDDFKKGRDGPAVGNQ 548 GWDDFK+GRD P GNQ Sbjct: 172 GWDDFKRGRDAPISGNQ 188 >At5g13970.1 Length = 405 Score = 31.2 bits (69), Expect = 0.73 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +1 Query: 160 NQALNIDLSNEESKRRLFNRSKQRGFL-ELDLILGRWVEDHIHSMDENGIKALVHVLDLE 336 N+ ++ +S E + ++ F+ D +LG + E H+ S DENG+K ++ + + Sbjct: 172 NKLNSLHVSEELQDNLSMSTENEKPFVVSEDNLLGAFKESHVGSSDENGLKPILKRRENQ 231 Query: 337 NPDLWKWLTGQGQPPEAVRMNPVFADVQKRVMNNLNSHASPKTRATPGQPWVEGV 501 D + P+ VR + +DV+ R + + S ++P + VE V Sbjct: 232 ADD--------SKSPKRVRFS---SDVKDRTLTE-GDNDSVMEASSPNEDKVEAV 274 >At5g08580.1 Length = 392 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 8/43 (18%) Frame = +1 Query: 256 LGRWVEDHIHSMDENG--------IKALVHVLDLENPDLWKWL 360 +G W E+H ++ D NG +H D +NP L WL Sbjct: 211 MGWWKEEHFNASDANGDGLLNLTEFNDFLHPADTKNPKLLLWL 253 >At3g45970.1 Length = 266 Score = 29.6 bits (65), Expect = 2.1 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Frame = +1 Query: 61 LNSSNQTSIATSTMSSHNIYRPILGSLPCFYSSN------QALNIDLSNEESKRRLFNRS 222 LN SNQT + S+ + + +PI+G+ Q + D N+ R+ S Sbjct: 98 LNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEAS 157 Query: 223 KQRGFLELDLI 255 K+ +LE+ L+ Sbjct: 158 KKPNYLEIKLL 168 >At3g08960.1 Length = 755 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +1 Query: 160 NQALNIDLSNEESKRRLFNRSKQRGFLELDLILGRWVED 276 N AL+++LSN+ RR+ +R ++ +ILG WV + Sbjct: 437 NGALSLELSNDHPNRRIIHR-------KVAMILGHWVSE 468 >At3g12140.2 Length = 328 Score = 29.3 bits (64), Expect = 2.8 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Frame = +1 Query: 82 SIATSTMSSHNIYRPILGSLPCFYSSNQALNIDLSNEESKRRLFNRSKQRGFLELDLILG 261 S A + Y P +G+ +N+ ++ +S ES L R + Sbjct: 94 SAARKKQKTFPSYNPSIGATGNRSFNNRLVSSGISGNESAEALIGRK----------VWT 143 Query: 262 RWVEDHI--------HSMDENGIKALVHVLDLENPDLWKWLTGQGQPPEAVR 393 +W ED+ ++ DE G ALV+ + N + W+W+ + PPE +R Sbjct: 144 KWPEDNHFYEAIITQYNADE-GRHALVYDIHAAN-ETWEWVDLKEIPPEDIR 193 >At3g12140.1 Length = 328 Score = 29.3 bits (64), Expect = 2.8 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Frame = +1 Query: 82 SIATSTMSSHNIYRPILGSLPCFYSSNQALNIDLSNEESKRRLFNRSKQRGFLELDLILG 261 S A + Y P +G+ +N+ ++ +S ES L R + Sbjct: 94 SAARKKQKTFPSYNPSIGATGNRSFNNRLVSSGISGNESAEALIGRK----------VWT 143 Query: 262 RWVEDHI--------HSMDENGIKALVHVLDLENPDLWKWLTGQGQPPEAVR 393 +W ED+ ++ DE G ALV+ + N + W+W+ + PPE +R Sbjct: 144 KWPEDNHFYEAIITQYNADE-GRHALVYDIHAAN-ETWEWVDLKEIPPEDIR 193 >At3g32940.1 Length = 608 Score = 28.9 bits (63), Expect = 3.6 Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 1/96 (1%) Frame = -2 Query: 511 KSSQPPPPMAAQELLLSLEKHGCSDCSLPFSAHQQKQ-DSFLLPLEVAPDQSTTSISPDF 335 K+S P+ AQ+LL D SLP +H + DSF L P + ++ P Sbjct: 308 KNSMNLNPLFAQQLLPVPH-----DTSLPPGSHVPRPPDSFPFSLSNTPRTYSVTLPPYS 362 Query: 334 PSQGHEQGL*FHFHP*NEYDLQPISPESNPAPGTLF 227 SQ +QPI P S P TLF Sbjct: 363 GSQ-----------------IQPIGPRSTVRPSTLF 381 >At4g30400.1 Length = 473 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -2 Query: 421 SAHQQKQDSFLLPLEVAPDQSTTSISPD 338 S+HQ + SFLL LE A D S+ I D Sbjct: 184 SSHQDPRSSFLLVLESASDHSSREIGGD 211 >At1g28380.1 Length = 613 Score = 28.5 bits (62), Expect = 4.7 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -1 Query: 584 RQQLTLQDQISLLIPHRWAITSFLEIIPTPSTHGCPGVAL 465 R+QLTL+D++ +P W + I TH GV + Sbjct: 147 RKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTM 186 >At4g31950.1 Length = 513 Score = 28.1 bits (61), Expect = 6.1 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 175 IDLSNEESKRRLFNRSKQRGFLELDLILGRWVEDHIHSMDENGIK 309 +DL E + + R ELD+IL RW+E+H +G K Sbjct: 232 LDLQGHEKEMKQTRR-------ELDVILERWIENHRQQRKVSGTK 269 >At5g62640.1 Length = 521 Score = 28.1 bits (61), Expect = 6.1 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = -2 Query: 550 Y*FPTAGPSRPFLKSSQPP--PPMAAQELLLSLEKHGCSDCSLPFSAHQQKQDSFLL--- 386 Y PT P+ + PP PPM + L++ G S S S+ + +DS L+ Sbjct: 127 YYHPTLNPT-----GAPPPGKPPMYNSSIGLAISSDGASSSSAALSSITESEDSVLVNPP 181 Query: 385 PLEVAPD 365 PL PD Sbjct: 182 PLPPLPD 188 >At1g27730.1 Length = 228 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 502 QPPPPMAAQELLLSLEKHGCSDCSLPFSAHQ 410 QPPPP A ++L + CS C FS++Q Sbjct: 68 QPPPPPAVEKL-----SYKCSVCDKTFSSYQ 93 >At3g20740.1 Length = 370 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/35 (28%), Positives = 19/35 (54%) Frame = +1 Query: 301 GIKALVHVLDLENPDLWKWLTGQGQPPEAVRMNPV 405 G+K ++ V+D+ + + K L G G +R P+ Sbjct: 105 GVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPL 139 >At4g31970.1 Length = 524 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 223 KQRGFLELDLILGRWVEDHIHSMDENGIK 309 KQ G ELD+IL RW+E+H +G K Sbjct: 253 KQTG-RELDVILERWIENHRQQRKVSGTK 280 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,931,274 Number of Sequences: 28581 Number of extensions: 407382 Number of successful extensions: 1434 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1429 length of database: 12,141,370 effective HSP length: 98 effective length of database: 9,340,432 effective search space used: 1597213872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At5g51040.1 (567 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g51040.1 382 e-107 At1g73880.1 31 0.40 At1g53300.1 31 0.53 At5g08580.1 31 0.53 At5g41750.2 30 0.90 At5g41750.1 30 0.90 At4g36590.1 29 2.0 At1g80850.1 28 2.6 At5g43390.1 28 2.6 At5g41740.1 28 2.6 At2g34130.1 28 3.4 At1g42410.1 28 3.4 At4g04430.1 28 3.4 At2g13160.1 28 3.4 At2g38740.1 27 5.8 At4g25860.1 27 5.8 At1g44980.1 27 5.8 At3g52020.1 27 7.6 At1g61770.1 27 7.6 At4g01990.1 27 7.6 At2g25940.1 27 7.6 At4g28990.1 27 7.6 At5g55060.1 27 9.9 At4g28740.1 27 9.9 At4g25850.1 27 9.9 At3g19020.1 27 9.9 >At5g51040.1 Length = 189 Score = 382 bits (982), Expect = e-107 Identities = 188/188 (100%), Positives = 188/188 (100%) Frame = +1 Query: 1 MATRKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLGARFFCENTASAQNFD 180 MATRKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLGARFFCENTASAQNFD Sbjct: 1 MATRKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLGARFFCENTASAQNFD 60 Query: 181 IDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENP 360 IDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENP Sbjct: 61 IDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENP 120 Query: 361 DLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGR 540 DLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGR Sbjct: 121 DLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGR 180 Query: 541 DAPISGNQ 564 DAPISGNQ Sbjct: 181 DAPISGNQ 188 >At1g73880.1 Length = 474 Score = 31.2 bits (69), Expect = 0.40 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 292 ENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPPEAVSSN 417 ENV + +G +IH L + L W+T PP A+ S+ Sbjct: 86 ENVQDLPPSGFPLMIHALGNLHAPLISWITSHPSPPVAIVSD 127 >At1g53300.1 Length = 700 Score = 30.8 bits (68), Expect = 0.53 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 87 GGRNDRAPANHGGGANDPVNVDQSFSGS 4 GG + P N GGG+N PVNV S S Sbjct: 180 GGISPAKPTNTGGGSNSPVNVGSSSRSS 207 >At5g08580.1 Length = 392 Score = 30.8 bits (68), Expect = 0.53 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 8/47 (17%) Frame = +1 Query: 274 LGNWVEENVNSMDENG--------VKSLIHVLNLENPDLWKWLTEQE 390 +G W EE+ N+ D NG +H + +NP L WL ++E Sbjct: 211 MGWWKEEHFNASDANGDGLLNLTEFNDFLHPADTKNPKLLLWLCKEE 257 >At5g41750.2 Length = 829 Score = 30.0 bits (66), Expect = 0.90 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 387 GTASGSSEFKSGVLGVTRESHEESEQACSAR 479 GT S SS FK+ +L + ES+E + +CS R Sbjct: 642 GTLSASSRFKASILILPVESYETDDISCSLR 672 >At5g41750.1 Length = 829 Score = 30.0 bits (66), Expect = 0.90 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 387 GTASGSSEFKSGVLGVTRESHEESEQACSAR 479 GT S SS FK+ +L + ES+E + +CS R Sbjct: 642 GTLSASSRFKASILILPVESYETDDISCSLR 672 >At4g36590.1 Length = 249 Score = 28.9 bits (63), Expect = 2.0 Identities = 17/66 (25%), Positives = 32/66 (48%) Frame = +1 Query: 196 EENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENPDLWKW 375 +E ++R + LL S+++ +GNW E++V +D N LI L L + Sbjct: 118 KEKQKRMVLDLLKESREQ--------VGNWYEKDVKDLDMNETNQLISALQDVKKKLVRE 169 Query: 376 LTEQEQ 393 +++ Q Sbjct: 170 MSQYSQ 175 >At1g80850.1 Length = 328 Score = 28.5 bits (62), Expect = 2.6 Identities = 11/50 (22%), Positives = 29/50 (58%) Frame = +1 Query: 76 IPAAANRSYPIIFRNGVDLGARFFCENTASAQNFDIDLSNEENKRRTINR 225 +P + S PI+ RNG+ + A + + ++S ++ + +++ + +R + R Sbjct: 54 MPQCSPLSPPILRRNGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRR 103 >At5g43390.1 Length = 644 Score = 28.5 bits (62), Expect = 2.6 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = +1 Query: 310 DENGVKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNP 420 D+N V S I LNLE P + LTE P S NP Sbjct: 24 DDNSVISQIATLNLEEPQM--GLTENFSPTFLTSGNP 58 >At5g41740.1 Length = 1047 Score = 28.5 bits (62), Expect = 2.6 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 387 GTASGSSEFKSGVLGVTRESHEESEQACSAR 479 GT S SS FK+ +L + ES+E +CS R Sbjct: 869 GTLSASSRFKASILILPVESYETEGISCSIR 899 >At2g34130.1 Length = 460 Score = 28.1 bits (61), Expect = 3.4 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +1 Query: 277 GNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPP--EAVSSNPVFSALHEKVM 450 GNW E+ DE K + +PD+WK L + Q P E S+N + H+ Sbjct: 172 GNWKEKG----DEAKPKWI-------DPDVWKGLVQFWQDPKSEKKSNNSRNARYHDPDG 220 Query: 451 KNLNKHAAPET 483 K + KH + +T Sbjct: 221 KGIYKHRSGQT 231 >At1g42410.1 Length = 432 Score = 28.1 bits (61), Expect = 3.4 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +1 Query: 277 GNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPP--EAVSSNPVFSALHEKVM 450 GNW E+ DE K + +PD+WK L + Q P E S+N + H+ Sbjct: 170 GNWKEKG----DEAKPKWI-------DPDVWKGLVQFWQDPKSEKKSNNSRNARYHDPDG 218 Query: 451 KNLNKHAAPET 483 K + KH + +T Sbjct: 219 KGIYKHRSGQT 229 >At4g04430.1 Length = 351 Score = 28.1 bits (61), Expect = 3.4 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +1 Query: 277 GNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPP--EAVSSNPVFSALHEKVM 450 GNW E+ DE K + +PD+WK L + Q P E S+N + H+ Sbjct: 121 GNWKEKG----DEAKPKWI-------DPDVWKGLVQFWQDPKSEKKSNNSRNARYHDLDG 169 Query: 451 KNLNKHAAPET 483 K++ KH + +T Sbjct: 170 KDIYKHRSGQT 180 >At2g13160.1 Length = 438 Score = 28.1 bits (61), Expect = 3.4 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +1 Query: 277 GNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPP--EAVSSNPVFSALHEKVM 450 GNW E+ DE K + +PD+WK L + Q P E S+N + H+ Sbjct: 170 GNWKEKG----DEAKPKWI-------DPDVWKGLVQFWQDPKSEKKSNNSRNARYHDPDG 218 Query: 451 KNLNKHAAPET 483 K + KH + +T Sbjct: 219 KGIYKHRSGQT 229 >At2g38740.1 Length = 245 Score = 27.3 bits (59), Expect = 5.8 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 112 FRNGVDLGARFFCENTASAQNFDIDL 189 F NGV + +FF EN A N +I L Sbjct: 53 FNNGVPIDEKFFVENIAGKHNSEIAL 78 >At4g25860.1 Length = 381 Score = 27.3 bits (59), Expect = 5.8 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +1 Query: 292 ENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHA 471 EN+ + VK+L V+ E+ +W + E + A K++ + Sbjct: 282 ENITGLKPPTVKNLQEVMESESTIVW------SEVSEGILKKDWERAREAKILVEEKQRE 335 Query: 472 APETRAAAGQPWV-RGWDDFKRGRD 543 A + R A+G+ WV + + K G+D Sbjct: 336 ALKQREASGESWVPKHFSVVKDGKD 360 >At1g44980.1 Length = 247 Score = 27.3 bits (59), Expect = 5.8 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = +1 Query: 193 NEENKRRTINRLLYRSKQRGFLELDLVLGN--W-VEENVNSMDENGVKSLIHVLNLE 354 + N +RT N + S GF+ +D+ N W V+ V ++ NG S+I+ +E Sbjct: 145 SSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVE 201 >At3g52020.1 Length = 502 Score = 26.9 bits (58), Expect = 7.6 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +1 Query: 202 NKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLT 381 ++ +NRLLYRSK RGF +S+D N + ++ H L++ +P + Sbjct: 27 SQTHVLNRLLYRSK-RGF--------------GSSVDTNHLNAIRH-LSVSSPQNTSGVN 70 Query: 382 EQEQPPEAVSSN 417 +QEQ + N Sbjct: 71 QQEQKERDLIEN 82 >At1g61770.1 Length = 301 Score = 26.9 bits (58), Expect = 7.6 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = +2 Query: 197 KRIREERSTDCCI---GASKEGFWNLILFWGIGLRRMLIPWTKMVLNP*FMSSIWK 355 ++++EE S + + GA K W L+ G+R +L+P+T + L + S +W+ Sbjct: 185 QKLQEELSNELDLQIKGAEKPSVWELL-----GVRFILLPYTIIKLLVWYSSWVWR 235 >At4g01990.1 Length = 503 Score = 26.9 bits (58), Expect = 7.6 Identities = 16/87 (18%), Positives = 36/87 (41%) Frame = +1 Query: 226 LLYRSKQRGFLELDLVLGNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPPEA 405 L+ K++ D+ W++ + D +GV+ ++ + E ++ W T A Sbjct: 197 LVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANL--AA 254 Query: 406 VSSNPVFSALHEKVMKNLNKHAAPETR 486 + E+ +K+L + P+ R Sbjct: 255 IYIKVGLYGKAEEALKSLENNMNPDVR 281 >At2g25940.1 Length = 479 Score = 26.9 bits (58), Expect = 7.6 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 18/109 (16%) Frame = +1 Query: 259 ELDLVLG-NWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPPE-----AVSSNP 420 +L L +G N +EN ++EN ++ V N + DL + + ++ PE + Sbjct: 308 KLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQ 367 Query: 421 VFSALHEK------------VMKNLNKHAAPETRAAAGQPWVRGWDDFK 531 V A+ + ++ L HA +G+P V WD K Sbjct: 368 VLEAMSHRLHVDNSILLIGILLFGLEGHAVLNKVRPSGEPLVDDWDCLK 416 >At4g28990.1 Length = 348 Score = 26.9 bits (58), Expect = 7.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 481 TRAAAGQPWVRGWDDFKRGRDAPISG 558 TRA++ P RG++D K G D SG Sbjct: 67 TRASSSSPGRRGYEDHKHGSDLNHSG 92 >At5g55060.1 Length = 646 Score = 26.6 bits (57), Expect = 9.9 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +1 Query: 280 NWVEE-NVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVF 426 +W E N++ D + V+ + + +LW+ L E +P AV P+F Sbjct: 425 DWTENGNMSGDDSSPVRGQLSTRMQKEGNLWRELWETAKPLPAVKQAPLF 474 >At4g28740.1 Length = 348 Score = 26.6 bits (57), Expect = 9.9 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Frame = +1 Query: 325 KSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQ- 501 K L V + P+ KWL EQ++ S +PV+ +L + P +A Q Sbjct: 270 KKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSLRLDGRVRASGVGYPPWQAFVAQL 329 Query: 502 PWVRG-WDDFKRGRDAPI 552 P V+G W G D + Sbjct: 330 PPVKGMWTGLLDGMDGRV 347 >At4g25850.1 Length = 384 Score = 26.6 bits (57), Expect = 9.9 Identities = 19/84 (22%), Positives = 37/84 (44%) Frame = +1 Query: 259 ELDLVLGNWVEENVNSMDENGVKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALH 438 EL+++ +EN+ + VK+L V E+ +W + E + A Sbjct: 278 ELEVIYN--AKENITGLKPPTVKNLEEVTESESTMVW------SEVSEGILKKDWERARE 329 Query: 439 EKVMKNLNKHAAPETRAAAGQPWV 510 K++ + A+ + R A+G+ WV Sbjct: 330 AKIVVEEKQRASLKQREASGESWV 353 >At3g19020.1 Length = 957 Score = 26.6 bits (57), Expect = 9.9 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -3 Query: 295 SPQPNSPKQDQVPKT 251 SP+P PKQ+Q PKT Sbjct: 581 SPKPQPPKQEQPPKT 595 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,133,408 Number of Sequences: 28581 Number of extensions: 280793 Number of successful extensions: 908 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 908 length of database: 12,141,370 effective HSP length: 94 effective length of database: 9,454,756 effective search space used: 888747064 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)