BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_147849 (1125 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g45590.1 148 6e-36 At2g30640.1 30 3.3 At2g24990.1 28 7.4 At2g24090.1 28 9.7 >At5g45590.1 Length = 174 Score = 148 bits (373), Expect = 6e-36 Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 6/173 (3%) Frame = +1 Query: 64 MQRWCSKLRSLAALRSTPNAHHYPLTPHRLLHTATNPIINKPFTQSILSPTFKPLCHGGP 243 MQR+C+KLRS++ L+S N Y +PHRL+H + +P + T + + K Sbjct: 1 MQRFCTKLRSIS-LQSNRNLSFYGASPHRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAA 59 Query: 244 VSFPTHSS-----LLPLSFMQVRYITAKQRKRKLKSR-KPMTPITSKVKKIKMKFYSSYK 405 FP++ S +P F+QVR IT+K++ K K + +P TPITSKVKK+K+KFYSS+K Sbjct: 60 GVFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFYSSFK 119 Query: 406 DRFRVMKDGQIRRWKEGKRHNAHXXXXXXXXXXXQPATVPLAYAKVMKKLSFC 564 DRF+ + DG IRRWKEGKRHNAH QP VP AYAKVMKKL+FC Sbjct: 120 DRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFC 172 >At2g30640.1 Length = 755 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +3 Query: 285 HASAVHHCKTEEKEV-EKQEAHDSNHIKSQENQNE 386 HA A+ + T +E+ EKQ + + SQENQNE Sbjct: 66 HALALQNSGTHSEEIHEKQLVEGKDEVDSQENQNE 100 >At2g24990.1 Length = 538 Score = 28.5 bits (62), Expect = 7.4 Identities = 24/100 (24%), Positives = 37/100 (37%) Frame = +1 Query: 220 KPLCHGGPVSFPTHSSLLPLSFMQVRYITAKQRKRKLKSRKPMTPITSKVKKIKMKFYSS 399 +P HGG S P SSL P+S + +KL S +P+ ++K+ +S Sbjct: 66 RPNAHGGHGSRPNSSSLQPIS----------NKAQKLTSHVRASPLEGWEGRVKVGMSNS 115 Query: 400 YKDRFRVMKDGQIRRWKEGKRHNAHXXXXXXXXXXXQPAT 519 R G +R + G+ N P T Sbjct: 116 VTTAIR----GSLRDTEIGRSRNTDKADRATVEQALDPRT 151 >At2g24090.1 Length = 146 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 370 KKIKMKFYSSYKDRFRVMKDGQIRRWKEGKRH 465 K KMK + + RFRV G+I R + GK+H Sbjct: 73 KGYKMKTHKASAKRFRVTGRGKIVRRRSGKQH 104 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,032,505 Number of Sequences: 28581 Number of extensions: 430208 Number of successful extensions: 1257 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1253 length of database: 12,141,370 effective HSP length: 101 effective length of database: 9,254,689 effective search space used: 2526530097 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_178902 (840 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g45590.1 129 3e-30 At3g46990.1 28 5.0 At2g24990.1 28 5.0 At3g42120.1 25 5.7 At2g24090.1 28 6.5 At4g06624.1 28 8.5 >At5g45590.1 Length = 174 Score = 129 bits (323), Expect = 3e-30 Identities = 76/174 (43%), Positives = 103/174 (59%), Gaps = 6/174 (3%) Frame = +2 Query: 59 MQRWCSKLRSLAAVRSTPNTXXXXXXXXXXXXTATNPIINKPFTHSILSPTFKPLCHGGP 238 MQR+C+KLRS++ ++S N + +P + T + + K Sbjct: 1 MQRFCTKLRSIS-LQSNRNLSFYGASPHRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAA 59 Query: 239 VSFPTHSS-----LLPLSFMQVRYITAKQRKRKLKSR-KPMTPITSKVKKIKMKFYSSYK 400 FP++ S +P F+QVR IT+K++ K K + +P TPITSKVKK+K+KFYSS+K Sbjct: 60 GVFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFYSSFK 119 Query: 401 DRFRVMKDGQIRRWKEGKRHNAHXXXXXXXXXXXQPATVPLAYAKVMKKLSFCS 562 DRF+ + DG IRRWKEGKRHNAH QP VP AYAKVMKKL+FC+ Sbjct: 120 DRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFCN 173 >At3g46990.1 Length = 548 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 250 GERNGATMAKGFKGGREY*MCEGFVNNGIGS 158 G R+GA + GF+GGR C+G + I S Sbjct: 454 GVRSGANIVSGFEGGRS--SCDGLFHGSINS 482 >At2g24990.1 Length = 538 Score = 28.5 bits (62), Expect = 5.0 Identities = 24/100 (24%), Positives = 37/100 (37%) Frame = +2 Query: 215 KPLCHGGPVSFPTHSSLLPLSFMQVRYITAKQRKRKLKSRKPMTPITSKVKKIKMKFYSS 394 +P HGG S P SSL P+S + +KL S +P+ ++K+ +S Sbjct: 66 RPNAHGGHGSRPNSSSLQPIS----------NKAQKLTSHVRASPLEGWEGRVKVGMSNS 115 Query: 395 YKDRFRVMKDGQIRRWKEGKRHNAHXXXXXXXXXXXQPAT 514 R G +R + G+ N P T Sbjct: 116 VTTAIR----GSLRDTEIGRSRNTDKADRATVEQALDPRT 151 >At3g42120.1 Length = 410 Score = 25.0 bits (53), Expect(2) = 5.7 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = +3 Query: 117 PITTLFLLIVFSTLLPIPLLTNPSHIQYSLPPLNPFAMV---APFRSPLTRLSSPFLS 281 P+TT V S P+ L P ++YS PP P + F + RLS P +S Sbjct: 288 PVTT-----VTSPTAPLLLDPPPKRLRYSSPPPKPPDFINKSLKFPKTVLRLSKPRVS 340 Score = 21.6 bits (44), Expect(2) = 5.7 Identities = 7/20 (35%), Positives = 12/20 (60%) Frame = +2 Query: 50 RAKMQRWCSKLRSLAAVRST 109 R ++QRWC L ++ +T Sbjct: 240 RIELQRWCRSTPPLVSIDTT 259 >At2g24090.1 Length = 146 Score = 28.1 bits (61), Expect = 6.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 365 KKIKMKFYSSYKDRFRVMKDGQIRRWKEGKRH 460 K KMK + + RFRV G+I R + GK+H Sbjct: 73 KGYKMKTHKASAKRFRVTGRGKIVRRRSGKQH 104 >At4g06624.1 Length = 620 Score = 27.7 bits (60), Expect = 8.5 Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 5/137 (3%) Frame = +2 Query: 17 QPKAKNLSPK*RAKMQRWCSKLRSLAAVRSTPNTXXXXXXXXXXXXTATNPIINKPFTHS 196 Q K+ + K +K+Q+WC K L A T P + P + Sbjct: 446 QSKSLTEAHKNNSKLQKWCKKQDRLIAKCFKLLTDKLSCSSSTTAIPQVQPPMEMP-SRR 504 Query: 197 ILSPTFKPLCHGGPVSF--PTHSSLLPLSFMQVRYIT---AKQRKRKLKSRKPMTPITSK 361 I +PT +P V HSS + R T + R R + SR+ + + Sbjct: 505 INAPTHRPELSEQRVPHVQARHSSFESREHKRRRKATLTRSSSRSRLIHSRRSLDRGAGR 564 Query: 362 VKKIKMKFYSSYKDRFR 412 ++ ++KF S R R Sbjct: 565 SRRREVKFPQSGAGRHR 581 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,219,252 Number of Sequences: 28581 Number of extensions: 376007 Number of successful extensions: 1108 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1106 length of database: 12,141,370 effective HSP length: 98 effective length of database: 9,340,432 effective search space used: 1690618192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_197595 (777 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g45590.1 119 2e-27 At2g30640.1 30 1.2 At4g39480.1 30 1.5 At2g23180.1 30 2.0 At4g29210.1 29 3.4 At5g22680.1 29 3.4 At5g12400.1 29 3.4 At5g11180.1 28 4.4 At5g16505.1 28 5.8 At1g24340.1 28 7.5 At5g16780.1 28 7.5 At5g02270.1 27 9.8 At2g32770.2 27 9.8 At2g32770.1 27 9.8 At1g23180.1 27 9.8 >At5g45590.1 Length = 174 Score = 119 bits (297), Expect = 2e-27 Identities = 73/172 (42%), Positives = 93/172 (54%), Gaps = 6/172 (3%) Frame = +3 Query: 39 MQRWCSKLRSIAALRSTANSHYPFVPYRVIHTATNSIVNRTFTYSIFSPSFKPICNGGSF 218 MQR+C+KLRSI+ + S Y P+R+IH + + + T T F+ S K + Sbjct: 1 MQRFCTKLRSISLQSNRNLSFYGASPHRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAAG 60 Query: 219 SFPTHSS-----LLPLSFTQVRYITAKQRKRKLKSR-KPMTPITXXXXXXXXXXXXXXXD 380 FP++ S +P F QVR IT+K++ K K + +P TPIT D Sbjct: 61 VFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFYSSFKD 120 Query: 381 RFRVLKDGQIRRWKEGKRHNAHXXXXXXXXXXXQPATVPVAYAKVMKKLNFC 536 RF+ L DG IRRWKEGKRHNAH QP VP AYAKVMKKLNFC Sbjct: 121 RFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFC 172 >At2g30640.1 Length = 755 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +2 Query: 257 HASAVHHCKTEEKEV-EKQKAHDSDHIKSQENQNK 358 HA A+ + T +E+ EKQ D + SQENQN+ Sbjct: 66 HALALQNSGTHSEEIHEKQLVEGKDEVDSQENQNE 100 >At4g39480.1 Length = 990 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -3 Query: 559 SIELQMLQQKLSFFITFA*ATGTVAGCLSRRFDFLDFKCAL 437 +++LQ + Q+ +F TF ATG GCLS ++F AL Sbjct: 639 AVDLQDMFQRFTFDTTFVLATGYDPGCLSVEMPEVEFARAL 679 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -3 Query: 556 IELQMLQQKLSFFITFA*ATGTVAGCLSRRFDFLDFKCAL 437 ++LQ + Q+ +F TF ATG GCLS ++F AL Sbjct: 170 VDLQDVFQRFTFDTTFVLATGYDPGCLSVEMPEIEFARAL 209 >At2g23180.1 Length = 517 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 556 IELQMLQQKLSFFITFA*ATGTVAGCLSRRFDFLDFKCAL 437 ++LQ + Q+ +F +F ATG GCLS ++F AL Sbjct: 171 VDLQDVFQRFTFDTSFVLATGVDPGCLSTEMPQIEFARAL 210 >At4g29210.1 Length = 638 Score = 28.9 bits (63), Expect = 3.4 Identities = 24/94 (25%), Positives = 33/94 (35%) Frame = +3 Query: 39 MQRWCSKLRSIAALRSTANSHYPFVPYRVIHTATNSIVNRTFTYSIFSPSFKPICNGGSF 218 M RW + LR SH+ V + S VN F + SPS + N Sbjct: 407 MNRW-------SQLRDQGTSHFCVVDADRNSVSMTSTVNYRFGAGVLSPSTGIVLNNEMD 459 Query: 219 SFPTHSSLLPLSFTQVRYITAKQRKRKLKSRKPM 320 F T + + P + KR L S P+ Sbjct: 460 DFSTPTEITPDMLPPAPTNFIEPNKRPLSSMTPL 493 >At5g22680.1 Length = 236 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 161 LHIFNIFSQL*THLQWRLLFIPHSLVSPPSFFHASAVHHCKTEEKEV 301 L + ++F L + L L F P L+S F ++HHC EK++ Sbjct: 134 LVVSSLFHYLVSGLDGFLSFAPQFLLSSLEFVEIKSIHHCHLCEKKL 180 >At5g12400.1 Length = 1596 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Frame = -3 Query: 688 LS*KT*NKTCYMFALEMILYTELTQEDNQHNQKKCH-----SSESGSKSIELQM 542 LS K N+ + F E Y L D+ H+Q KCH S+SGS I ++ Sbjct: 1500 LSRKAGNERVHQFHRERY-YVPLENSDSDHDQPKCHLCGSIESKSGSTFISCEL 1552 >At5g11180.1 Length = 907 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +3 Query: 168 YSIFSPSFKPICNGGSFSFPTHSSLLPLSFTQVRYITAKQRKRKLKSR 311 Y+I P+FK +G F+FP S L+P Q+ IT + + ++++ Sbjct: 702 YTIIEPTFK--ADGFGFAFPLGSPLVPDLSRQILNITEGETMKAIENK 747 >At5g16505.1 Length = 598 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 Query: 39 MQRWCSKLRSIAALRSTANSHYPFVP 116 MQ W K RS+AAL T Y F+P Sbjct: 147 MQAWRGKERSMAALHGTYEEGYRFLP 172 >At1g24340.1 Length = 708 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -2 Query: 128 NNTIGNKRVMTIRS*TEGGNRPELRAPSLHLCSDLGF 18 +N +GN+R+ ++S EGG +L+ P+ DLGF Sbjct: 489 SNPLGNQRLSRLKSIFEGGKSLQLQFPA----EDLGF 521 >At5g16780.1 Length = 821 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = +2 Query: 272 HHCKTEEKEVEKQKAHDSDHIKSQENQ 352 H K +EK+ +++K D DH + +E + Sbjct: 37 HRSKDKEKDYDREKIRDKDHRRDKEKE 63 >At5g02270.1 Length = 329 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 257 ERKREERRVSGE*KGAAIANGFKAGRKY*ICEGSVDNGISSS 132 E + EE RV+G+ + NG+ AGR + G DN + SS Sbjct: 283 ETRTEESRVTGD-PARMLNNGWAAGRLHSTVAGGEDNFVLSS 323 >At2g32770.2 Length = 429 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 556 CSCCHSRWSGISSDCVGC 609 CS CH +G SSDC C Sbjct: 165 CSSCHCDQNGTSSDCGSC 182 >At2g32770.1 Length = 517 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 556 CSCCHSRWSGISSDCVGC 609 CS CH +G SSDC C Sbjct: 246 CSSCHCDQNGTSSDCGSC 263 >At1g23180.1 Length = 835 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/25 (40%), Positives = 19/25 (76%) Frame = +3 Query: 240 LLPLSFTQVRYITAKQRKRKLKSRK 314 LLP+S TQ++++T + RK+ + R+ Sbjct: 20 LLPISSTQIQFLTVEARKQSRRIRR 44 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,977,911 Number of Sequences: 28581 Number of extensions: 342033 Number of successful extensions: 1139 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1078 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1136 length of database: 12,141,370 effective HSP length: 98 effective length of database: 9,340,432 effective search space used: 1494469120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_132112 (656 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g45590.1 134 4e-32 At5g19910.1 31 0.68 At3g08820.1 30 1.5 At2g24090.1 29 2.0 At5g56890.1 29 2.6 At1g73590.1 28 3.4 At1g23080.1 28 4.4 At1g23080.2 28 4.4 At5g04290.1 28 5.8 At3g08850.1 27 7.5 At4g27340.1 27 7.5 At3g23950.1 27 7.5 At4g38600.2 27 9.8 At4g38600.1 27 9.8 At1g70940.1 27 9.8 At1g58300.1 27 9.8 At1g03790.1 27 9.8 >At5g45590.1 Length = 174 Score = 134 bits (337), Expect = 4e-32 Identities = 82/178 (46%), Positives = 101/178 (56%), Gaps = 10/178 (5%) Frame = +3 Query: 87 MQRWCSKLRSLA-----SALHYSAKPRNPASISIRTLHISPNLLNKSTAQFPIFPSFKSL 251 MQR+C+KLRS++ + Y A P R +H SP+ T F + Sbjct: 1 MQRFCTKLRSISLQSNRNLSFYGASPH-------RLIHHSPSPSRHLTTTTLGFANSTKW 53 Query: 252 QNVPQVXXXXXXXXXXXXXX----FFQVRHITAKQRKRKLKSR-QPLTPITSKVKKIKMK 416 VP F QVR+IT+K++ K K + +P TPITSKVKK+K+K Sbjct: 54 SFVPAAGVFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIK 113 Query: 417 CYSSFKGRFRVMKDGQIRRWKEGKRHNAHLKSKKAXXXXXXPGTVPLAYAKVMKKLNF 590 YSSFK RF+ + DG IRRWKEGKRHNAHLKSKK+ PG VP AYAKVMKKLNF Sbjct: 114 FYSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 171 >At5g19910.1 Length = 197 Score = 30.8 bits (68), Expect = 0.68 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +1 Query: 121 LRHCITQQSPE-IPPQFPYGPSTFLLIYSTNPLPNFQFSPALSPFK 255 L+H + + PE +PPQ P PST L P SPALSP + Sbjct: 127 LKHILPRPLPEPVPPQPPVAPSTSL---PPAPSATAALSPALSPMQ 169 >At3g08820.1 Length = 686 Score = 29.6 bits (65), Expect = 1.5 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = -3 Query: 381 ESMVAYSLTFFSSVLQ*YASLEKKKEGDERDWSLRGEELE-------GHFEGT*SWGKLE 223 +SMV + +S+++Q YAS KEG E + E L+ G S G L+ Sbjct: 271 DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALD 330 Query: 222 IGQW 211 +G+W Sbjct: 331 LGEW 334 >At2g24090.1 Length = 146 Score = 29.3 bits (64), Expect = 2.0 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +3 Query: 399 KKIKMKCYSSFKGRFRVMKDGQIRRWKEGKRHNAHLKSKK 518 K KMK + + RFRV G+I R + GK+H K+ K Sbjct: 73 KGYKMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 112 >At5g56890.1 Length = 1114 Score = 28.9 bits (63), Expect = 2.6 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Frame = +1 Query: 4 PQNPSRKPQEKHTVEDTHGHTVRPERRRCKDGAQSSGHWLRHCITQQ------SPEIPPQ 165 P +PS P H H ER++ D S H I+ + S PPQ Sbjct: 335 PSSPSPPPLSSH-------HQHHQERKKIADSPAPSP-LPPHLISPKKSNRKGSMTPPPQ 386 Query: 166 FPYGPSTFLLIYSTNPLPNFQFSPALSPFKMSLKFLTP 279 + PS P+P+ SPA +P S+K ++P Sbjct: 387 SHHAPSP--------PIPDSLISPAHAPVSFSMKRISP 416 >At1g73590.1 Length = 623 Score = 28.5 bits (62), Expect = 3.4 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +1 Query: 175 GPSTFLLIYSTNPLPNFQFSPALSPFKMSLKFLTPQTPIPLISLFLFF 318 G + F+ +++ PL +F F A +P+ M+L+FL + +I L L F Sbjct: 41 GINRFVALFAV-PLLSFHFIAANNPYAMNLRFLAADSLQKVIVLSLLF 87 >At1g23080.1 Length = 620 Score = 28.1 bits (61), Expect = 4.4 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 175 GPSTFLLIYSTNPLPNFQFSPALSPFKMSLKFLTPQTPIPLISLFL 312 G + F+ I++ PL +F F + +P+ M+L+F+ T LI L L Sbjct: 41 GINRFVAIFAV-PLLSFHFISSNNPYAMNLRFIAADTLQKLIMLTL 85 >At1g23080.2 Length = 528 Score = 28.1 bits (61), Expect = 4.4 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 175 GPSTFLLIYSTNPLPNFQFSPALSPFKMSLKFLTPQTPIPLISLFL 312 G + F+ I++ PL +F F + +P+ M+L+F+ T LI L L Sbjct: 41 GINRFVAIFAV-PLLSFHFISSNNPYAMNLRFIAADTLQKLIMLTL 85 >At5g04290.1 Length = 1494 Score = 27.7 bits (60), Expect = 5.8 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -3 Query: 327 ASLEKKKEGDERDWSLRGEELEGHFEGT*SWGKLEIG--QWIC*VN*EKCGGSVWKLRRD 154 +S KK +G + D G E F+G SWGK + G W + GGS+W + D Sbjct: 976 SSWGKKDDGQKDDG---GSSWEKKFDGGSSWGKKDDGGSSW----GKKDDGGSLWGKKDD 1028 Query: 153 FGA 145 G+ Sbjct: 1029 GGS 1031 >At3g08850.1 Length = 1345 Score = 27.3 bits (59), Expect = 7.5 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 96 WCSKLRSLASALHYSAKPRNPASISIRTLHISPNLLNKSTAQFPI 230 W + SL ++L AK +P S +I +LH+SP L ST P+ Sbjct: 735 WKPQSSSLLTSLPSIAKFHDPGSATIVSLHMSP-LTRASTDSQPV 778 >At4g27340.1 Length = 638 Score = 27.3 bits (59), Expect = 7.5 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -3 Query: 138 SNAVPKPVTGALSTIFASSSLRPHCVPVSVFYCVFFLGLSA 16 +N++P PV + S F L+P+ P ++ +CVF LS+ Sbjct: 10 ANSLPFPVISSYSARFI---LKPYPKPKTLIFCVFSSNLSS 47 >At3g23950.1 Length = 419 Score = 27.3 bits (59), Expect = 7.5 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = +1 Query: 61 HTVRPERRRCKDGAQSSGHWLRHCITQQSPEIPPQFPYGPSTFLLIYSTNPLPNF 225 H + R+C DG S +W + P F GP+ LL+ S LP + Sbjct: 355 HKESEDERKCMDGCTLSFNWCNEYMETVHRYFSPSFQGGPN--LLLASQYVLPRW 407 >At4g38600.2 Length = 1795 Score = 26.9 bits (58), Expect = 9.8 Identities = 23/74 (31%), Positives = 29/74 (39%) Frame = +3 Query: 3 TTKPQQKAPRKTHSRRHSRAHSEA*ETTMQRWCSKLRSLASALHYSAKPRNPASISIRTL 182 T K P SRR+ R S A Q S +P+NPAS++I Sbjct: 594 TDKDNDCVPGSARSRRYRRRSSNANSDGNQ---------------SEEPKNPASLTIGAN 638 Query: 183 HISPNLLNKSTAQF 224 H N L+ TA F Sbjct: 639 H---NSLDTPTASF 649 >At4g38600.1 Length = 1813 Score = 26.9 bits (58), Expect = 9.8 Identities = 23/74 (31%), Positives = 29/74 (39%) Frame = +3 Query: 3 TTKPQQKAPRKTHSRRHSRAHSEA*ETTMQRWCSKLRSLASALHYSAKPRNPASISIRTL 182 T K P SRR+ R S A Q S +P+NPAS++I Sbjct: 594 TDKDNDCVPGSARSRRYRRRSSNANSDGNQ---------------SEEPKNPASLTIGAN 638 Query: 183 HISPNLLNKSTAQF 224 H N L+ TA F Sbjct: 639 H---NSLDTPTASF 649 >At1g70940.1 Length = 641 Score = 26.9 bits (58), Expect = 9.8 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +1 Query: 175 GPSTFLLIYSTNPLPNFQFSPALSPFKMSLKFLTPQTPIPLISLFL 312 G + F+ I++ PL +F F +P+ M+L+F+ T +I L L Sbjct: 41 GINRFVAIFAV-PLLSFHFISTNNPYAMNLRFIAADTLQKIIMLSL 85 >At1g58300.1 Length = 284 Score = 26.9 bits (58), Expect = 9.8 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -2 Query: 499 ALCRFPSFQRLICPSFITL 443 A CRFP+ +RL C S+++L Sbjct: 8 ASCRFPASRRLDCESYVSL 26 >At1g03790.1 Length = 394 Score = 26.9 bits (58), Expect = 9.8 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +1 Query: 133 ITQQSPEIPPQFPYGPSTFLLIYSTN-PLPNFQFSPALSPFKMSLKFLTPQTPI 291 + QQ P P QF PST Y TN P NF FS +P + + T T + Sbjct: 319 LQQQQPSSPLQFALSPST--PSYLTNSPQANF-FSDDFTPRRRQMNDFTAMTAV 369 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,671,889 Number of Sequences: 28581 Number of extensions: 325219 Number of successful extensions: 1021 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1018 length of database: 12,141,370 effective HSP length: 96 effective length of database: 9,397,594 effective search space used: 1146506468 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At5g45590.1 (522 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g45590.1 313 5e-86 At4g32980.1 30 1.0 At4g39480.1 28 2.2 At5g59780.3 28 3.8 At5g59780.1 28 3.8 At5g59780.2 28 3.8 At2g23180.1 27 6.5 At3g50320.1 27 8.5 At4g22260.1 27 8.5 At1g47370.1 27 8.5 At3g45990.1 27 8.5 >At5g45590.1 Length = 174 Score = 313 bits (801), Expect = 5e-86 Identities = 152/173 (87%), Positives = 152/173 (87%) Frame = +1 Query: 1 MQRFCTKLRSISLQSNRNLSFYGASPHRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAAG 180 MQRFCTKLRSISLQSNRNLSFYGASPHRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAAG Sbjct: 1 MQRFCTKLRSISLQSNRNLSFYGASPHRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAAG 60 Query: 181 VFPSNVSSMGTTFVPHHFVQVRNITSXXXXXXXXXXWRPRTPITSKVKKVKIKFYSSFKD 360 VFPSNVSSMGTTFVPHHFVQVRNITS WRPRTPITSKVKKVKIKFYSSFKD Sbjct: 61 VFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFYSSFKD 120 Query: 361 RFKPLNDGTIRRWKEGKRHNAHXXXXXXXXXXXQPGLVPPAYAKVMKKLNFCN 519 RFKPLNDGTIRRWKEGKRHNAH QPGLVPPAYAKVMKKLNFCN Sbjct: 121 RFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFCN 173 >At4g32980.1 Length = 474 Score = 29.6 bits (65), Expect = 1.0 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 4/79 (5%) Frame = +1 Query: 25 RSISLQSNRNLSFYGASPHRLIHHSPSPSRHL---TTTTLGF-ANSTKWSFVPAAGVFPS 192 RSI +Q NRN+ F PH H RH + GF ANS +F G Sbjct: 73 RSIDVQDNRNVEFMAPPPHPPPLHPLDHLRHYDDSSNNMWGFEANSEFQAFSGVVGPSEP 132 Query: 193 NVSSMGTTFVPHHFVQVRN 249 +S+ G P RN Sbjct: 133 MMSTFGEEDFPFLISNKRN 151 >At4g39480.1 Length = 990 Score = 28.5 bits (62), Expect = 2.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 515 QKLSFFMTFAYAGGTSPGCLNLRFDFFDFKCAL 417 Q+ +F TF A G PGCL++ +F AL Sbjct: 177 QRFTFDTTFVLATGYDPGCLSVEMPEIEFARAL 209 Score = 28.1 bits (61), Expect = 2.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 515 QKLSFFMTFAYAGGTSPGCLNLRFDFFDFKCAL 417 Q+ +F TF A G PGCL++ +F AL Sbjct: 647 QRFTFDTTFVLATGYDPGCLSVEMPEVEFARAL 679 >At5g59780.3 Length = 236 Score = 27.7 bits (60), Expect = 3.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 219 CSSSLCSSTKYHF*GKNGKMEEEVE 293 CSSS+ ++T G NGKM +E E Sbjct: 129 CSSSMTTTTSQDTGGSNGKMNQECE 153 >At5g59780.1 Length = 171 Score = 27.7 bits (60), Expect = 3.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 219 CSSSLCSSTKYHF*GKNGKMEEEVE 293 CSSS+ ++T G NGKM +E E Sbjct: 64 CSSSMTTTTSQDTGGSNGKMNQECE 88 >At5g59780.2 Length = 215 Score = 27.7 bits (60), Expect = 3.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 219 CSSSLCSSTKYHF*GKNGKMEEEVE 293 CSSS+ ++T G NGKM +E E Sbjct: 108 CSSSMTTTTSQDTGGSNGKMNQECE 132 >At2g23180.1 Length = 517 Score = 26.9 bits (58), Expect = 6.5 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 515 QKLSFFMTFAYAGGTSPGCLNLRFDFFDFKCAL 417 Q+ +F +F A G PGCL+ +F AL Sbjct: 178 QRFTFDTSFVLATGVDPGCLSTEMPQIEFARAL 210 >At3g50320.1 Length = 145 Score = 26.6 bits (57), Expect = 8.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 240 LNKVMRNKGSAHGANIRRKNSGGGNEAPFGGIG 142 LNK+ R+KG N+ R N GG GG+G Sbjct: 48 LNKMGRDKGEHLLNNLGRDNDEGGLSLRVGGMG 80 >At4g22260.1 Length = 352 Score = 26.6 bits (57), Expect = 8.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 31 ISLQSNRNLSFYGASPHRLIHHSPSPSRHL 120 ++L+ +R Y +S HRL+HH P SR L Sbjct: 19 VTLRRSRAAVSYSSS-HRLLHHLPLSSRRL 47 >At1g47370.1 Length = 364 Score = 26.6 bits (57), Expect = 8.5 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = +1 Query: 289 WRPRTPITSKVKKVKIKFYSSFKDRFKPLNDGTIR 393 W +++ KV I F+ K +FK D T+R Sbjct: 328 WNQTKTTRARIGKVLIHFWEKLKKKFKDTYDRTVR 362 >At3g45990.1 Length = 134 Score = 26.6 bits (57), Expect = 8.5 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 Query: 301 TPITSKVKKVKIKFYSSFKDRFKPLNDG 384 +P T+K++K I YSS KDRFK DG Sbjct: 85 SPSTAKMRKKMI--YSSTKDRFKRELDG 110 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,176,963 Number of Sequences: 28581 Number of extensions: 190682 Number of successful extensions: 584 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 584 length of database: 12,141,370 effective HSP length: 93 effective length of database: 9,483,337 effective search space used: 758666960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)