BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= lgn_164737
         (612 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g04910.1                                                           160   7e-40
At3g25510.1                                                            29   2.3  
At1g64180.1                                                            28   3.0  
At1g59620.1                                                            28   5.1  
At4g04000.1                                                            27   6.7  
At1g19260.1                                                            27   6.7  

>At5g04910.1
          Length = 218

 Score =  160 bits (404), Expect = 7e-40
 Identities = 79/134 (58%), Positives = 99/134 (73%)
 Frame = +3

Query: 171 VAVLRRFVGVQQRRAEAYARLKRGFEDYMASGVESTYQQLCSEITDEFNDCSKQVLEMES 350
           + +LR  + +QQRRA+AYA LK GF +Y+ SG E+ YQ+LCSEIT EF++CSKQV EMES
Sbjct: 45  LVLLRSLLEIQQRRAQAYANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMES 104

Query: 351 QFLTAHCFREDLSLLLRSVQNQEKMKLQLTATIQVLKRAGRPSERPVSHENCRFSKPTGH 530
            FL     R DL+ LL  +Q QEK KL L     VLK+AGRPSER ++HENC+F KP  H
Sbjct: 105 LFLNPEVGRADLAKLLSDIQTQEKQKLHL-----VLKKAGRPSERMLTHENCKFKKPMQH 159

Query: 531 ECVHIQKITEASGT 572
           ECVH+ +ITEA+GT
Sbjct: 160 ECVHLHEITEAAGT 173


>At3g25510.1
          Length = 1982

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 21/87 (24%), Positives = 39/87 (44%)
 Frame = +3

Query: 282 QQLCSEITDEFNDCSKQVLEMESQFLTAHCFREDLSLLLRSVQNQEKMKLQLTATIQVLK 461
           +++C  ++DE  D S++++ M+           DLS     V N  +  LQ  + +Q ++
Sbjct: 530 REICEALSDETMDSSRRIIGMDF----------DLSKNGEEVTNISEKGLQRMSNLQFIR 579

Query: 462 RAGRPSERPVSHENCRFSKPTGHECVH 542
             GR   R  S  N    + + + C H
Sbjct: 580 FDGRSCARHSS--NLTVVRSSDNNCAH 604


>At1g64180.1
          Length = 594

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +3

Query: 138 GNHGERDSLKIVAVLRRFVGVQQRRAEAYARLKRGFEDYMASGVESTYQQ--LCSEITDE 311
           G+  E+  L  V V  R     QRR+++ + L+  FED MA  + S  ++    +E+  E
Sbjct: 449 GDETEKPELIKVGVSER----PQRRSQSPSSLQVKFEDQMAWAMSSNEKKKTRANEMEPE 504

Query: 312 FNDCSKQVLEMESQFLTAH 368
              C K+   +  + +  H
Sbjct: 505 TEKCGKETNNVVGEMIRTH 523


>At1g59620.1
          Length = 843

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 246 EDYMASGVESTYQQLCSEITDEFNDCSKQVLEMESQFLTAHCFRED 383
           E  ++ GVE  +  L  E +D F    KQ  E+ S      CF ED
Sbjct: 3   ETLLSFGVEKLWDLLVRE-SDRFQGVKKQFNELRSDLNKLRCFLED 47


>At4g04000.1
          Length = 1078

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 114 PILQPCSTSSSNLFLPQFPTKSKVYI*HGFTHILK 10
           PIL  C + + + F+PQ      V I H   H LK
Sbjct: 503 PILHSCISENQSAFVPQRAISDNVLITHEALHYLK 537


>At1g19260.1
          Length = 770

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
 Frame = +3

Query: 165 KIVAVLRRFVGVQQRRAEAYARLKRGFEDYMAS------GVESTYQQLCSEITDEFNDCS 326
           K   V  RF+GV   +  +   LK   +   A        +        S +  EFN   
Sbjct: 289 KYGVVKERFIGVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGQGYDGASNMKGEFNGLR 348

Query: 327 KQVLEMESQFLTAHCFREDLSLLLRSV 407
             +L+  S     HCF   L L++ +V
Sbjct: 349 SLILKESSSAYYVHCFAHQLQLVVMAV 375


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,513,542
Number of Sequences: 28581
Number of extensions: 252998
Number of successful extensions: 829
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,141,370
effective HSP length: 95
effective length of database: 9,426,175
effective search space used: 1018026900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cangn_198454
         (894 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g04910.1                                                           212   2e-55
At5g10900.1                                                            30   1.9  
At1g57780.1                                                            28   5.4  
At1g26680.1                                                            28   7.1  
At4g02350.1                                                            28   7.1  
At5g52280.1                                                            28   9.3  
At4g13670.1                                                            28   9.3  
At5g13680.1                                                            28   9.3  

>At5g04910.1
          Length = 218

 Score =  212 bits (540), Expect = 2e-55
 Identities = 115/220 (52%), Positives = 148/220 (67%), Gaps = 17/220 (7%)
 Frame = +1

Query: 16  ITVEEFEKKVVISEE-----ESNCGEND----SLKIGA--------VLRRFLDVQQRRAL 144
           ++ E+F+KKV + +      E+ CG +     S  +G+        +LR  L++QQRRA 
Sbjct: 1   MSAEDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQ 60

Query: 145 AYARLKRGFQDYMASGVESAYQQLCSDITVEFSDCSKQVLEMESQFLTAHCFREDLALLL 324
           AYA LK GF +Y+ SG E+ YQ+LCS+IT EFS+CSKQV EMES FL     R DLA LL
Sbjct: 61  AYANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLL 120

Query: 325 RSVQNQEKMKLKLTAKIQVLKRAGRPSERLVSHENCRFSKPSGHECVHIQKITEASGTXX 504
             +Q QEK KL L     VLK+AGRPSER+++HENC+F KP  HECVH+ +ITEA+GT  
Sbjct: 121 SDIQTQEKQKLHL-----VLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEE 175

Query: 505 XXXXXXXXXXLKEAIKGVQDAVTTINEHLEEVRYEIAALE 624
                     LKEAI+GVQDAVT+INE+LE++RYEI ALE
Sbjct: 176 AEADAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALE 215


>At5g10900.1
          Length = 601

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
 Frame = +1

Query: 1   RSMKPITVEEFEKKVVISEEESNCGENDSLKIGAVLRRFLD--VQQRRALAYARLKRGF- 171
           R  +P TV+  E      E E   G  D    G ++   +   ++ +  L +     G  
Sbjct: 116 RKYEPETVDHLEDMTEPIEMEIYLGNGDGGDFGDIVLEPISWPLESQLTLEWVETLMGLL 175

Query: 172 -QDYMASGVESAYQQLCSDITVEFSDCSKQVLEMESQFLTAH-CFREDLALLLRSVQNQE 345
            Q    + V      L   + V   DC+ Q+LE E+  +  + C  +   +++  +  Q 
Sbjct: 176 NQSTWKNSVSEFSLILPHSVAVSLVDCASQILEKEANCVKINGCSEDSRVIVVGDLHGQ- 234

Query: 346 KMKLKLTAKIQVLKRAGRPSE 408
                L   +++  ++GRPS+
Sbjct: 235 -----LHDLLKIFDQSGRPSQ 250


>At1g57780.1
          Length = 265

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = +1

Query: 226 ITVEFSDCSKQVLEMESQFLTAHCFR--EDLALLLRSVQNQEK----MKLKLTAKIQVLK 387
           I++ F DC+K++ ++  QF    C    +D  +L+    N  K    +K K   KI+++ 
Sbjct: 39  ISMNFEDCAKKIRKVACQFEVKSCITDIDDQKVLVSGDFNLHKLVKTLKKKTGKKIEIVT 98

Query: 388 RAGRPSE 408
           +  + SE
Sbjct: 99  KNEKSSE 105


>At1g26680.1
          Length = 921

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 279 VSNCPLLPRGSGSTFEICSKSGKDEAETDCQNTSLEKSWPPLRASGES 422
           +S CP       +  E    +  +E+E DC     +K W   RAS E+
Sbjct: 356 LSLCPTQSNNHKTPLECSEGNKSEESEEDCLEVKKKKYWSRCRASVEN 403


>At4g02350.1
          Length = 772

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +1

Query: 157 LKRGFQDYMASGVESAYQQLCSDITVEFSDCSKQVLEMESQFLTAHCFREDLALLLRSVQ 336
           LKR  +D +A   E     LC D+    S  + + L+++ Q L +  F E+L  LL   +
Sbjct: 627 LKRVLRDVLAHISEKIVGTLCGDLVKRLSMAAIKGLDVDIQLLDS--FTENLTPLLTDKE 684

Query: 337 NQEKMK 354
            +E  K
Sbjct: 685 AREMKK 690


>At5g52280.1
          Length = 854

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
 Frame = +1

Query: 229 TVEFSDCSKQVLEMESQFL--------TAHCFREDLALLLRSVQNQEKMKLKLTAKIQVL 384
           ++E+S+C   V E+ESQ           A  + ED+  ++R    QE+  +K    ++  
Sbjct: 513 SLEYSECLITVNELESQVKELKKELEDQAQAYDEDIDTMMREKTEQEQRAIKAEENLRKT 572

Query: 385 K-RAGRPSERLVSHENCR------FSKPSGHECVHIQKITEAS 492
           +      +ERL   E C+       SK S HE +  + + EA+
Sbjct: 573 RWNNAITAERL--QEKCKRLSLEMESKLSEHENLTKKTLAEAN 613


>At4g13670.1
          Length = 388

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +1

Query: 22  VEEFEKKVVISEEESNCGENDSLKIGAVLRRFLDVQQR----RALAYARLKRGF 171
           VEE EK+V+I+EE+    E     +  + RR L V       +AL  A LK GF
Sbjct: 150 VEEEEKRVIIAEEKVRVSE----PVKKIKRRILKVGSEGDDVQALQEALLKLGF 199


>At5g13680.1
          Length = 1320

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 91   KIGAVLRRFLDVQQRRALAYARLK 162
            K+G  L R+L V+QRR L  A+LK
Sbjct: 1128 KVGKYLTRYLAVRQRRLLLAAKLK 1151


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,930,817
Number of Sequences: 28581
Number of extensions: 343528
Number of successful extensions: 895
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,141,370
effective HSP length: 99
effective length of database: 9,311,851
effective search space used: 1843746498
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_125515
         (715 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g04910.1                                                           213   1e-55
At5g27470.1                                                            33   0.12 
At4g12290.1                                                            30   1.3  
At1g78580.1                                                            29   2.3  
At5g41790.1                                                            29   3.0  
At3g54870.1                                                            29   3.0  
At3g03130.1                                                            29   3.0  
At4g11150.1                                                            28   3.9  
At5g61200.1                                                            28   3.9  
At4g39580.1                                                            27   8.6  

>At5g04910.1
          Length = 218

 Score =  213 bits (541), Expect = 1e-55
 Identities = 114/219 (52%), Positives = 152/219 (69%), Gaps = 12/219 (5%)
 Frame = +1

Query: 13  EDFEKKVSISDEPD---KMDTEDTVVLSATKIVG---------LLRKFLAVQQRRAQAYA 156
           EDF+KKVS+ D      + +   + V S +  VG         LLR  L +QQRRAQAYA
Sbjct: 4   EDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQAYA 63

Query: 157 KLKSGFEDYMVSGSESAYQQLCSEITVEFNDCSREVLDLESLFRSADFFREDLACLLKSV 336
            LKSGF +Y+ SG+E+ YQ+LCSEIT EF++CS++V ++ESLF + +  R DLA LL  +
Sbjct: 64  NLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDI 123

Query: 337 QTQEKQKLQLTATIQVLKKVGRPSERLVSHENCRFNRAIGHQCVHINKITEASGTXXXXX 516
           QTQEKQKL L     VLKK GRPSER+++HENC+F + + H+CVH+++ITEA+GT     
Sbjct: 124 QTQEKQKLHL-----VLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEA 178

Query: 517 XXXXXXXLKEAIRGVQNAVITINEHLEEVRYEIAALETE 633
                  LKEAIRGVQ+AV +INE+LE++RYEI ALE +
Sbjct: 179 DAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALEAD 217


>At5g27470.1
          Length = 452

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +1

Query: 178 DYMVSGSESAYQ------QLCSEITVEFNDCSREVLDLESLFRSADFFREDLAC 321
           D M+  SE  YQ      Q+ S ++   ND + +  DLE+ F S++ FRE ++C
Sbjct: 309 DEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELVSC 362


>At4g12290.1
          Length = 567

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 172 FEDYMVSGSESAYQQLCSEITVEFNDCSREVLDLESLFRSAD---FFREDLACLLKS 333
           F+ YM +G      Q      V  NDC R    ++ +F +AD   F RE++ C+ +S
Sbjct: 198 FKTYMDAGEYGFGLQAMP--LVPLNDCPRNAAYMDGVFAAADGTPFVRENMVCIFES 252


>At1g78580.1
          Length = 943

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 185 WCQEVSQLTNNFAVRSLLNSMTVQEKSLIWNHSFAALISFGRI 313
           W   V  +   F  R+  +    ++ SLIWN+ +A  I FGR+
Sbjct: 689 WVDSVKHVFKYFTERTPRSHFETRDTSLIWNYKYAD-IEFGRL 730


>At5g41790.1
          Length = 1306

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 9/168 (5%)
 Frame = +1

Query: 187  VSGSESAYQQLCSEITVEFNDCSREVLDLESLFRSADFFREDLACLLKSVQTQ----EKQ 354
            +  +ES  Q+L SE        + +  +L SL    +  + +L+  L+ ++ Q    E +
Sbjct: 617  IKRAESTIQELSSESERLKGSHAEKDNELFSLRDIHETHQRELSTQLRGLEAQLESSEHR 676

Query: 355  KLQLTATIQVLKKVGRPSERLVSHENCRFNRA---IGHQCVHINKITEASGTXXXXXXXX 525
             L+L+ +++  ++  R     +S  +    R    +       +K+ E            
Sbjct: 677  VLELSESLKAAEEESRTMSTKISETSDELERTQIMVQELTADSSKLKEQLAEKESKLFLL 736

Query: 526  XXXXLKEA--IRGVQNAVITINEHLEEVRYEIAALETE*LVHSILVEQ 663
                 K    I+ ++  V T+   LE VR  I  LETE    + +VEQ
Sbjct: 737  TEKDSKSQVQIKELEATVATLELELESVRARIIDLETEIASKTTVVEQ 784


>At3g54870.1
          Length = 942

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 265 LDLESLFRSADFFREDLACLLKSVQTQEKQKLQLTATIQVLKKVGRPSERLVSHE 429
           LD + L +  +   E++  + + +  +EKQ+ Q+ + +  LKK  R SE +V  +
Sbjct: 704 LDYDDLLQQKEKLGEEVRDMKERLLLEEKQRKQMESELSKLKKNLRESENVVEEK 758


>At3g03130.1
          Length = 521

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
 Frame = +1

Query: 13  EDFEKKVSISDEPDKMDTEDTVVLS-ATKIVGLLRKFLAVQQRRAQAYAKLKSGFEDYMV 189
           E FE KVS SD   K+D+  TV+++  +K +      LAV++    +       + DY +
Sbjct: 347 EAFESKVSASDNVSKVDSVATVLIADESKELDFSSSPLAVEELEEDS-----DEWSDYEI 401

Query: 190 SGSESAYQQLCSEITVEFNDC-SREVLDLES 279
                       E+ +E N C S E +++ES
Sbjct: 402 -----------GEVELEENSCGSEESIEIES 421


>At4g11150.1
          Length = 231

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 25/80 (31%), Positives = 41/80 (51%)
 Frame = +1

Query: 1   KKQMEDFEKKVSISDEPDKMDTEDTVVLSATKIVGLLRKFLAVQQRRAQAYAKLKSGFED 180
           KK  +D+EKK   +D   K+D   ++ L+A++I  L  +   V   + QA   L +    
Sbjct: 49  KKIRQDYEKKEKQADVRKKIDY--SMQLNASRIKVLQAQDDIVNAMKDQAAKDLLN---- 102

Query: 181 YMVSGSESAYQQLCSEITVE 240
             VS  E AY+QL  ++ V+
Sbjct: 103 --VSRDEYAYKQLLKDLIVQ 120


>At5g61200.1
          Length = 390

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +1

Query: 238 EFNDCSREVLDLE-------SLFRSADFFREDLACLLKSVQTQEKQKLQLTAT 375
           E ND S  VLDLE        L    ++ RE+L C  KS Q    Q+L+ T T
Sbjct: 106 EMNDLSEHVLDLEVRVTKSGKLEEEVNYLREEL-CSSKSEQLLLLQELESTET 157


>At4g39580.1
          Length = 376

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 94  KIVGLLR--KFLAVQQRRAQAYAKLKSGFEDYMVSGSESAYQQLCSEITVEFND 249
           K++GL R  KFL   +    AY +  +   D  V  S       C+EIT+E +D
Sbjct: 291 KLMGLERLIKFLCYSRVNLAAYGEKMAVLWDTFVPSSSKNKMIWCAEITIERHD 344


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,972,132
Number of Sequences: 28581
Number of extensions: 261265
Number of successful extensions: 670
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,141,370
effective HSP length: 97
effective length of database: 9,369,013
effective search space used: 1311661820
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At5g04910.1
         (654 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g04910.1                                                           347   4e-96
At4g09180.1                                                            31   0.67 
At1g24460.1                                                            29   2.0  
At1g62140.1                                                            29   2.6  
At5g04770.1                                                            28   4.4  
At3g19600.1                                                            28   4.4  
At1g22275.1                                                            28   5.7  
At1g76220.1                                                            27   7.5  
At1g18170.1                                                            27   7.5  
At1g36810.1                                                            27   9.7  
At5g13970.1                                                            27   9.7  
At5g60230.1                                                            27   9.7  
At3g09730.1                                                            27   9.7  

>At5g04910.1
          Length = 218

 Score =  347 bits (889), Expect = 4e-96
 Identities = 181/217 (83%), Positives = 181/217 (83%)
 Frame = +1

Query: 1   MSAEDFQKKVSLRDSLSGDIENECXXXXXXXXXXXXXXXXASQTLVLLRSLLEIQQRRAQ 180
           MSAEDFQKKVSLRDSLSGDIENEC                ASQTLVLLRSLLEIQQRRAQ
Sbjct: 1   MSAEDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQ 60

Query: 181 AYANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLL 360
           AYANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLL
Sbjct: 61  AYANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLL 120

Query: 361 SDIQTQEKQKLHLVLKKAGRPSERMLTHENCKFKKPMQHECVHLHXXXXXXXXXXXXXXX 540
           SDIQTQEKQKLHLVLKKAGRPSERMLTHENCKFKKPMQHECVHLH               
Sbjct: 121 SDIQTQEKQKLHLVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEADA 180

Query: 541 XXXXXLKEAIRGVQDAVTSINEYLEDIRYEIEALEAD 651
                LKEAIRGVQDAVTSINEYLEDIRYEIEALEAD
Sbjct: 181 EFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALEAD 217


>At4g09180.1
          Length = 263

 Score = 30.8 bits (68), Expect = 0.67
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 169 RRAQAYANLKSGFSEYVES-GAEALYQKLCSEITTEFSECSKQVREMESLFLNPE 330
           R+    A+  SG   +++S G +A Y  L   I  + S  SK+ REME+LF +PE
Sbjct: 94  RQNSTPADFLSGSDGFIQSFGIQANYDYLSGNI--DVSPGSKRSREMEALFSSPE 146


>At1g24460.1
          Length = 1731

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +1

Query: 139 LLRSLLEIQQRRAQAYANL--KSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMES 312
           L +SL E      + YA L  +S   E  E   + L Q L +E T E  EC  +++EM +
Sbjct: 377 LEQSLTEKTDELEKCYAELNDRSVSLEAYELTKKELEQSL-AEKTKELEECLTKLQEMST 435

Query: 313 LFLNPEVGRADLAKLLSDIQTQEKQKL 393
                E+ + +LAK  SD      Q++
Sbjct: 436 ALDQSELDKGELAK--SDAMVASYQEM 460


>At1g62140.1
          Length = 557

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 35  SEIPSPAILRTNAAVPVSGLLVRRW 109
           S IPSPA    +   P+SGLL+  W
Sbjct: 321 SSIPSPATSPRSFGTPISGLLILHW 345


>At5g04770.1
          Length = 584

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 86  SGLLVRRWAPASPLKPWSCFGVCWRFSSAELRLTPISKV 202
           + L+ RR+ P  P KPW        FS   L  T I K+
Sbjct: 434 NALIFRRYVPVGPTKPWPTLCFLTLFSITSLVFTLIWKL 472


>At3g19600.1
          Length = 602

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -1

Query: 282 FTELRCNLAAQLLIKCFSTRLHIL*ESTFEIGVSLSSALLNLQQTPKQDQ 133
           F  L+ +  A  L KCF+T+L  L E    + + L   LL+    P   Q
Sbjct: 358 FDGLQLSHEAVALTKCFTTKLSCLNEKKLHLVLDLDHTLLHTVMVPSLSQ 407


>At1g22275.1
          Length = 857

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 23/90 (25%), Positives = 45/90 (50%)
 Frame = +1

Query: 139 LLRSLLEIQQRRAQAYANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLF 318
           LL S+   + ++ +    L S     +E  ++  Y+KL ++   +  E     +E ES  
Sbjct: 424 LLESVRTSEDKKKELSIKLSS-----LEIESKDKYEKLQADAQRQVGELETLQKESESHQ 478

Query: 319 LNPEVGRADLAKLLSDIQTQEKQKLHLVLK 408
           L  ++    LAK ++ +QT  ++K HL+L+
Sbjct: 479 LQADL----LAKEVNQLQTIIEEKGHLILQ 504


>At1g76220.1
          Length = 257

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +1

Query: 121 ASQTLVLLRSLLEIQQ--RRAQAYANLKS--GFSEYVESGAEALYQKLCSEITTEFSECS 288
           A + L +L++L E+ +   R Q     KS  GF +  +   E L   +CS I     E  
Sbjct: 41  ARRKLGVLKNLYEVVEVFLRFQTTKTQKSFTGFEDVSDGFIEVL--DICSTIRDVLMEIK 98

Query: 289 KQVREMES 312
           +QVRE+ES
Sbjct: 99  EQVRELES 106


>At1g18170.1
          Length = 248

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 116 PEPTVELVDPTPEPPHSFSISPERESLRETFFWKSSAL 3
           PEP      P P PP   +   +R+   ET  W +S+L
Sbjct: 35  PEPESSSPPPPPPPPQPLASQQKRKKNVETTDWVASSL 72


>At1g36810.1
          Length = 556

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 27/89 (30%), Positives = 37/89 (41%)
 Frame = +2

Query: 35  SEIPSPAILRTNAAVPVSGLLVRRWAPASPLKPWSCFGVCWRFSSAELRLTPISKVDSQS 214
           S  P  A L    AVPV+  +     PA+PL P            A+L   PI   DS S
Sbjct: 118 SRNPIVAALAVAPAVPVAPAVPAIVPPAAPLDPIKEVPRIEPVLEADL---PIVPPDSSS 174

Query: 215 MWSLVLKHFIRSCAARLQRSSVNVRNKCA 301
              L L   +R  + R+QR++     + A
Sbjct: 175 TLELPLIRRMRRPSLRIQRANAGAPARAA 203


>At5g13970.1
          Length = 405

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 244 QKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDIQTQE 381
           +K  SE    FS+  KQ  E + L ++ E GR+   +  SD   +E
Sbjct: 45  EKELSESLNSFSDNGKQEHESDDLSIDEEKGRSSELQKPSDYDDEE 90


>At5g60230.1
          Length = 251

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
 Frame = +2

Query: 155 WRFSSAELRLTPISKVDSQSMWSLVLKHF---IRSCAARL--QRSSVNVRNKCAKWNLCF 319
           W+ + A+    PISK  S+   SL        + SC   L  +     + ++C    L  
Sbjct: 7   WKGAEAKALAEPISKSVSELQLSLAETESSGTLSSCNVLLAVEPEQAELLDRCCFGRLVL 66

Query: 320 *IQKLEELILLNFSATFKLKRSRNCI 397
             +K+++ I L+F   F L  +  CI
Sbjct: 67  SAEKIKKWIQLSFEEAFFLHYNLKCI 92


>At3g09730.1
          Length = 406

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1   MSAEDFQKKVSLRDSLSGDIENECXXXXXXXXXXXXXXXXASQTLVLLRSLLEIQQRRAQ 180
           M  E   +K++L ++   D+  EC                AS+    L  LL I+Q+  Q
Sbjct: 264 MELESELQKLNLAET--SDVMEECKDLVNGAESYQCGGISASELDKKLSHLL-IEQQEGQ 320

Query: 181 AY---ANLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLA 351
                A L++  S+  E  AE    K+C    TEF    +   E E           DL 
Sbjct: 321 INELEAELQTTQSKLQEKEAELQALKVCVRRLTEFPLLDRSDDEHEE----------DLN 370

Query: 352 KLLSDIQTQEKQKLHLVLKKAGRPSERMLTHENCKFKKPMQHECVHL 492
           + LS   +Q  +  H   K+                K+PM+  C+H+
Sbjct: 371 QDLSVSWSQHNKTDHEARKQI------------IGMKRPMESSCIHV 405


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,242,496
Number of Sequences: 28581
Number of extensions: 219507
Number of successful extensions: 840
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,141,370
effective HSP length: 96
effective length of database: 9,397,594
effective search space used: 1137108874
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)