BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 220763
         (668 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g21110.1                                                           281   3e-76
At1g59790.1                                                            29   2.7  
At4g10990.1                                                            28   3.5  
At3g63100.1                                                            28   4.6  
At4g17850.1                                                            28   6.0  
At5g55430.1                                                            28   6.0  
At3g16270.1                                                            28   6.0  
At1g80410.1                                                            27   7.8  

>At4g21110.1
          Length = 146

 Score =  281 bits (718), Expect = 3e-76
 Identities = 124/145 (85%), Positives = 132/145 (91%)
 Frame = +2

Query: 92  MPRVKTNRIKYPEGWELIEPTLAELDVKMREAGNDSNDGKRKCEALWPIFKVAHQRSRYV 271
           MP+VKTNR+KYPEGWELIEPTL ELD KMREA  DS+DGKRKCE LWPIFKV+HQRSRYV
Sbjct: 1   MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60

Query: 272 YDLYYGRNEISKELYEFCLEQGYADRNLIAKWKKPGYERLCCLHCIQPRDHNFATTCACR 451
           YDLYY R EISKELYEFCL+QGYADR+LIAKWKK GYERLCCL CIQPRDHN+ TTC CR
Sbjct: 61  YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 120

Query: 452 VPKHLRETAVIECVHCGCQGCASGD 526
           VPKHLRE  V+ECVHCGCQGCASGD
Sbjct: 121 VPKHLREEKVVECVHCGCQGCASGD 145


>At1g59790.1
          Length = 375

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 KTNRIKYPEGWELIEPTLAELDVKMREAGNDSNDGKRKCEALWPIFKVAHQRSRYVYDLY 283
           +  +IK+ EGW  I+  + +L +++ E   +      +C  L+ I          +YD+ 
Sbjct: 8   RPRQIKFEEGWSNIQKGITKL-IRILEGEPEPTFYFSECFKLYTI----------IYDMC 56

Query: 284 YGRNEISKELYE 319
             R++ S++LYE
Sbjct: 57  VQRSDYSQQLYE 68


>At4g10990.1
          Length = 1204

 Score = 28.5 bits (62), Expect = 3.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 322  LFGTRLCRSQLDCKVEKAWIRASLLLALHTAPGSQLCDYL 441
            +F  R    ++DC   +  I+A  L  LH   G+QL D L
Sbjct: 975  VFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADIL 1014


>At3g63100.1
          Length = 200

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 14/49 (28%), Positives = 17/49 (34%)
 Frame = +2

Query: 377 GYERLCCLHCIQPRDHNFATTCACRVPKHLRETAVIECVHCGCQGCASG 523
           G +R CC HC   R H++   C               C HC   G   G
Sbjct: 47  GVDRGCCRHCCGGRRHDYGRDCC-------------HCDHCHGHGYGHG 82


>At4g17850.1
          Length = 188

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 119 KYPEGWELIEPTLAELDVKMREAGNDSNDG-KRKCEALWPIFKVAHQRS 262
           K P+ W   + T  E+D    E GN+     KRK +A+   F+ A + S
Sbjct: 74  KVPDSWSCYDCT-KEVDEMREEKGNEETSSRKRKADAVTNFFETAEKTS 121


>At5g55430.1
          Length = 150

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 488 CVHCGCQGCASGD*FAFPIAVC 553
           C+ CGC+GC+ G  F      C
Sbjct: 126 CIRCGCRGCSGGCRFCPGCCAC 147


>At3g16270.1
          Length = 691

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 150 GSINSQPSGYFIRFVLTLGIFSFGYGRKYLRSPAPASYCYNYGKYAS 10
           G + SQ  G+    +L  G+  F + +  + +PA AS   NY   AS
Sbjct: 557 GILGSQNPGFIQNTMLPGGVMPFNFPQGMMMNPAFASQPLNYAAMAS 603


>At1g80410.1
          Length = 898

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 562 QMFLLAFQSIRNLLSVMTKDSDGLFSL*PFIL 657
           Q FLLAFQ+++ LL +  ++ D   SL  F L
Sbjct: 682 QKFLLAFQAVKQLLKLGAENPDSHRSLVKFFL 713


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,921,845
Number of Sequences: 28581
Number of extensions: 318731
Number of successful extensions: 788
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,141,370
effective HSP length: 96
effective length of database: 9,397,594
effective search space used: 1184096844
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= stgn_183343
         (678 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g21110.1                                                           283   8e-77
At3g63100.1                                                            28   4.7  
At4g17850.1                                                            28   4.7  
At5g55430.1                                                            28   6.1  
At1g59790.1                                                            27   8.0  

>At4g21110.1
          Length = 146

 Score =  283 bits (723), Expect = 8e-77
 Identities = 125/145 (86%), Positives = 133/145 (91%)
 Frame = +3

Query: 90  MPRVKTNRIKYPEGWELIEPTLAELDAKMREAGNDSNDGKRKCEALWPIFKVAHQRSRYV 269
           MP+VKTNR+KYPEGWELIEPTL ELDAKMREA  DS+DGKRKCE LWPIFKV+HQRSRYV
Sbjct: 1   MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60

Query: 270 YDLYYGRNEISKELYEFCLEQGYADRNLIAKWKKPGYERLCCLHCIQPRDHNFATTCACR 449
           YDLYY R EISKELYEFCL+QGYADR+LIAKWKK GYERLCCL CIQPRDHN+ TTC CR
Sbjct: 61  YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 120

Query: 450 VPKHLREASVIECVHCGCQGCASGD 524
           VPKHLRE  V+ECVHCGCQGCASGD
Sbjct: 121 VPKHLREEKVVECVHCGCQGCASGD 145


>At3g63100.1
          Length = 200

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 14/49 (28%), Positives = 17/49 (34%)
 Frame = +3

Query: 375 GYERLCCLHCIQPRDHNFATTCACRVPKHLREASVIECVHCGCQGCASG 521
           G +R CC HC   R H++   C               C HC   G   G
Sbjct: 47  GVDRGCCRHCCGGRRHDYGRDCC-------------HCDHCHGHGYGHG 82


>At4g17850.1
          Length = 188

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 117 KYPEGWELIEPTLAELDAKMREAGNDSNDG-KRKCEALWPIFKVAHQRS 260
           K P+ W   + T  E+D    E GN+     KRK +A+   F+ A + S
Sbjct: 74  KVPDSWSCYDCT-KEVDEMREEKGNEETSSRKRKADAVTNFFETAEKTS 121


>At5g55430.1
          Length = 150

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 486 CVHCGCQGCASGD*FAFPIAVC 551
           C+ CGC+GC+ G  F      C
Sbjct: 126 CIRCGCRGCSGGCRFCPGCCAC 147


>At1g59790.1
          Length = 375

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = +3

Query: 102 KTNRIKYPEGWELIEPTLAELDAKMREAGNDSNDGKRKCEALWPIFKVAHQRSRYVYDLY 281
           +  +IK+ EGW  I+  + +L  ++ E   +      +C  L+ I          +YD+ 
Sbjct: 8   RPRQIKFEEGWSNIQKGITKL-IRILEGEPEPTFYFSECFKLYTI----------IYDMC 56

Query: 282 YGRNEISKELYE 317
             R++ S++LYE
Sbjct: 57  VQRSDYSQQLYE 68


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,113,641
Number of Sequences: 28581
Number of extensions: 320822
Number of successful extensions: 829
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,141,370
effective HSP length: 96
effective length of database: 9,397,594
effective search space used: 1212289626
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cangn_196954
         (738 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g21110.1                                                           285   2e-77
At5g49140.1                                                            32   0.28 
At1g02260.1                                                            30   1.4  
At5g51660.1                                                            29   3.1  
At4g24810.1                                                            28   7.0  
At5g55430.1                                                            28   7.0  

>At4g21110.1
          Length = 146

 Score =  285 bits (729), Expect = 2e-77
 Identities = 123/145 (84%), Positives = 138/145 (95%)
 Frame = +2

Query: 101 MPKVKTNRVKYPEGWELIEPTLSELQAKMREAENDPHDGKRKCEALWPIFKIAHQKSRYI 280
           MPKVKTNRVKYPEGWELIEPTL EL AKMREAE D HDGKRKCE LWPIFK++HQ+SRY+
Sbjct: 1   MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60

Query: 281 FDLFHRRKEISKELYEFCMDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 460
           +DL++RR+EISKELYEFC+DQGYADR+LIAKWKK GYERLCCLRC+QPRDHN+ TTCVCR
Sbjct: 61  YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 120

Query: 461 VPQHLREEKVIECVHCGCKGCASGD 535
           VP+HLREEKV+ECVHCGC+GCASGD
Sbjct: 121 VPKHLREEKVVECVHCGCQGCASGD 145


>At5g49140.1
          Length = 981

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +3

Query: 222 ENARLCGLFSKLPIRRAGIFLISFTGGKRFPRNYMSSAWIKDMLIEI 362
           E ++  GL  K  +R++ IF++ F+      +NY SS+W  D L+EI
Sbjct: 52  ERSQTIGLELKEAVRQSKIFVVIFS------KNYASSSWCLDELVEI 92


>At1g02260.1
          Length = 501

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -2

Query: 476 LDAVELGRHRLFESCDPE-VACTSN-SRAVHNQVFSISQSNFDQHILDPCRTHIIPWKS 306
           +DA E  R+R   + + E ++C SN SR  HN   S  +SN   ++    R   + WKS
Sbjct: 250 MDAAETLRNRAGSAGESELISCNSNASREQHNDAESQGESNNTNNMFQTKRWRRVLWKS 308


>At5g51660.1
          Length = 1443

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +2

Query: 350 ADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCRVPQHLREEKVIECVHCGCKG 520
           AD N     K+  YE +CC         + +   +C + Q +R E + E    GCKG
Sbjct: 528 ADANATGVSKQSNYELVCC-------SGHGKNGALCVLRQSIRPEMITEVELPGCKG 577


>At4g24810.1
          Length = 411

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 IFKIAHQKSRYIFDLFHRRKEISKEL-YEF 331
           IF +  QK+   FDLF   KEI K++ YEF
Sbjct: 165 IFALYMQKTDIKFDLFSMTKEIEKQIGYEF 194


>At5g55430.1
          Length = 150

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 497 CVHCGCKGCASG 532
           C+ CGC+GC+ G
Sbjct: 126 CIRCGCRGCSGG 137


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,264,696
Number of Sequences: 28581
Number of extensions: 333547
Number of successful extensions: 894
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,141,370
effective HSP length: 97
effective length of database: 9,369,013
effective search space used: 1386613924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_124836
         (780 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g21110.1                                                           285   2e-77
At1g59790.1                                                            32   0.52 
At5g65160.1                                                            29   3.4  
At5g55430.1                                                            29   3.4  
At3g01175.1                                                            29   3.4  
At2g26710.1                                                            28   5.8  
At5g16030.1                                                            27   9.9  

>At4g21110.1
          Length = 146

 Score =  285 bits (729), Expect = 2e-77
 Identities = 124/145 (85%), Positives = 137/145 (94%)
 Frame = +2

Query: 74  MPKVKTNRVRYPEGWELIEPTLNELQAKMREAENDPNDNKRKCEALWPIFKIAHQKSRYI 253
           MPKVKTNRV+YPEGWELIEPTL EL AKMREAE D +D KRKCE LWPIFK++HQ+SRY+
Sbjct: 1   MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60

Query: 254 FDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFQTTCVCR 433
           +DLYYRR+EISKELYEFCLDQGYADR+LIAKWKK GYERLCCLRC+QPRDHN+ TTCVCR
Sbjct: 61  YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 120

Query: 434 VPKHLREEKVIECVHCGCRGCASGD 508
           VPKHLREEKV+ECVHCGC+GCASGD
Sbjct: 121 VPKHLREEKVVECVHCGCQGCASGD 145


>At1g59790.1
          Length = 375

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 18/72 (25%), Positives = 37/72 (51%)
 Frame = +2

Query: 86  KTNRVRYPEGWELIEPTLNELQAKMREAENDPNDNKRKCEALWPIFKIAHQKSRYIFDLY 265
           +  ++++ EGW  I+  + +L  ++ E E +P     +C  L+ I          I+D+ 
Sbjct: 8   RPRQIKFEEGWSNIQKGITKL-IRILEGEPEPTFYFSECFKLYTI----------IYDMC 56

Query: 266 YRRKEISKELYE 301
            +R + S++LYE
Sbjct: 57  VQRSDYSQQLYE 68


>At5g65160.1
          Length = 594

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = +2

Query: 233 HQKSRYIFDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHN 409
           H+    + +LY R  E+ K +Y F      ADR  IAK K        C    + RD N
Sbjct: 304 HRAHHRLGNLYLRLGEVEKSIYHFKHSGPEADREDIAKAKTVQTHLNKCTEAKRLRDWN 362


>At5g55430.1
          Length = 150

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 470 CVHCGCRGCASG 505
           C+ CGCRGC+ G
Sbjct: 126 CIRCGCRGCSGG 137


>At3g01175.1
          Length = 402

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = -2

Query: 407 YDHEVACSVDSRDVHIQAFSTLQLSSGQHSPDPSKTHTIPWRFPS------SCNKGQRCS 246
           +  EV C ++SR         L+LS+  H+P P+ + +  ++  S      S  KG+   
Sbjct: 82  FKKEVTCHIESRQEIKNTLDNLELSTSTHNPVPAFSFSFKYQVDSHLKVRISMQKGKILE 141

Query: 245 DSSD 234
           +  D
Sbjct: 142 EEED 145


>At2g26710.1
          Length = 521

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 165 KLKTIQMIIKENVRHYGPFLR*PIRRVATSLTFITGGRKSP 287
           KLKT+ MI+ E++R Y P +   IRR  + +    GG K P
Sbjct: 371 KLKTLSMILNESLRLYPPIVA-TIRRAKSDVKL--GGYKIP 408


>At5g16030.1
          Length = 340

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 374 RDVHIQAFSTLQLSSGQHSPDPSKTHTI 291
           RDV IQ+ +++ LSSG  SP P+KT  I
Sbjct: 199 RDVGIQSTTSVDLSSG--SPSPAKTPPI 224


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,562,116
Number of Sequences: 28581
Number of extensions: 351541
Number of successful extensions: 855
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,141,370
effective HSP length: 98
effective length of database: 9,340,432
effective search space used: 1503809552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At4g21110.1
         (438 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g21110.1                                                           318   8e-88
At1g13350.1                                                            30   0.53 
At1g59790.1                                                            30   0.70 
At3g63100.1                                                            28   1.6  
At5g65160.1                                                            28   2.6  
At5g55430.1                                                            27   3.5  
At5g51660.1                                                            27   4.5  
At3g17430.1                                                            27   5.9  
At3g10590.1                                                            26   7.7  
At5g47490.1                                                            26   7.7  
At1g49860.1                                                            26   7.7  
At4g11190.1                                                            26   7.7  
At5g46500.1                                                            26   7.7  

>At4g21110.1
          Length = 146

 Score =  318 bits (815), Expect = 8e-88
 Identities = 145/145 (100%), Positives = 145/145 (100%)
 Frame = +1

Query: 1   MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 180
           MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV
Sbjct: 1   MPKVKTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYV 60

Query: 181 YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 360
           YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR
Sbjct: 61  YDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCR 120

Query: 361 VPKHLREEKVVECVHCGCQGCASGD 435
           VPKHLREEKVVECVHCGCQGCASGD
Sbjct: 121 VPKHLREEKVVECVHCGCQGCASGD 145


>At1g13350.1
          Length = 759

 Score = 30.0 bits (66), Expect = 0.53
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +2

Query: 59  LLFESLMPR*EKLRLIHMMVRESVKLYGQSSKFLIRGVGMYMTFITEGKKYLKS 220
           L+FESL          H+ +RE VK YG++    + GV +Y T +    K+LK+
Sbjct: 520 LVFESL----------HLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKN 563


>At1g59790.1
          Length = 375

 Score = 29.6 bits (65), Expect = 0.70
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +1

Query: 13  KTNRVKYPEGWELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYVYDLY 192
           +  ++K+ EGW  I+  + +L  ++ E E +      +C  L+ I          +YD+ 
Sbjct: 8   RPRQIKFEEGWSNIQKGITKL-IRILEGEPEPTFYFSECFKLYTI----------IYDMC 56

Query: 193 YRREEISKELYE 228
            +R + S++LYE
Sbjct: 57  VQRSDYSQQLYE 68


>At3g63100.1
          Length = 200

 Score = 28.5 bits (62), Expect = 1.6
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = +1

Query: 286 GYERLCCLRCIQPRDHNYGTTCVCRVPKHLREEKVVECVHCGCQGCASG 432
           G +R CC  C   R H+YG  C               C HC   G   G
Sbjct: 47  GVDRGCCRHCCGGRRHDYGRDC-------------CHCDHCHGHGYGHG 82


>At5g65160.1
          Length = 594

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = +1

Query: 160 HQRSRYVYDLYYRREEISKELYEFCLDQGYADRSLIAKWKKSGYERLCCLRCIQPRDHN 336
           H+    + +LY R  E+ K +Y F      ADR  IAK K        C    + RD N
Sbjct: 304 HRAHHRLGNLYLRLGEVEKSIYHFKHSGPEADREDIAKAKTVQTHLNKCTEAKRLRDWN 362


>At5g55430.1
          Length = 150

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 397 CVHCGCQGCASG 432
           C+ CGC+GC+ G
Sbjct: 126 CIRCGCRGCSGG 137


>At5g51660.1
          Length = 1443

 Score = 26.9 bits (58), Expect = 4.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 250 ADRSLIAKWKKSGYERLCCLRCIQPRDHNYGTTCVCRVPKHLREEKVVECVHCGCQG 420
           AD +     K+S YE +CC           G  CV R  + +R E + E    GC+G
Sbjct: 528 ADANATGVSKQSNYELVCC-----SGHGKNGALCVLR--QSIRPEMITEVELPGCKG 577


>At3g17430.1
          Length = 376

 Score = 26.6 bits (57), Expect = 5.9
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
 Frame = -1

Query: 423 ASLTAAVNAFDHFLFTQVFGNTAYTCCSIVVVSWLYAAQAA*TFV---------SRLFPF 271
           A+    ++AF  F  +  FGNTAY   S+  +  L A     TF+          R   F
Sbjct: 80  ATCVVPISAF--FASSLWFGNTAYLHISVAFIQMLKALMPVATFIMAVVCGTDKPRCDVF 137

Query: 270 GNQTAICIALVQAEFIELFRYFFPSVIKVIYIPTPLMR 157
            N   + + +V + + E+      +V +V  I    +R
Sbjct: 138 SNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALR 175


>At3g10590.1
          Length = 207

 Score = 26.2 bits (56), Expect = 7.7
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -1

Query: 279 FPFGNQTAICIALVQAEFIELFRYFFPSVIKVIYIPTPL 163
           FP  N+  + +A    + +E  +Y++  ++  +Y+P PL
Sbjct: 22  FPPDNKRLVNVAQHLPKPLEEVKYYYEKLVNDVYLPKPL 60


>At5g47490.1
          Length = 1362

 Score = 26.2 bits (56), Expect = 7.7
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = +1

Query: 28  KYPEGW--ELIEPTLRELDAKMREAETDSHDGKRKCETLWPIFKVSHQRSRYVYDLYYRR 201
           +YP GW  + I    R LD+  +  +T      ++ +       V H R   V+D+Y + 
Sbjct: 319 QYP-GWYYDTIAQEWRSLDSYNQAFQTTGQANDQQVQNGNSFTAVDHSRESNVHDVYDKN 377

Query: 202 EEISKELYEFCLDQGYADRSLIAK 273
           + +  + ++     G  D+S   K
Sbjct: 378 QILRTQKFDIQSQHGSWDQSYYDK 401


>At1g49860.1
          Length = 255

 Score = 26.2 bits (56), Expect = 7.7
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 8/43 (18%)
 Frame = -1

Query: 372 VFGNTAYTCC--------SIVVVSWLYAAQAA*TFVSRLFPFG 268
           ++GN+A   C         +V V WL       TF+S L PFG
Sbjct: 13  IWGNSAALFCINEKGLDFELVFVDWLAGEAKTKTFLSTLNPFG 55


>At4g11190.1
          Length = 185

 Score = 26.2 bits (56), Expect = 7.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 140 GQSSKFLIRGVGMYMTFITEGKKYLKSSMN 229
           G     + RG+  +MT + EG KY +  M+
Sbjct: 147 GTGDFVMTRGIATFMTDLVEGSKYFRVKMD 176


>At5g46500.1
          Length = 418

 Score = 26.2 bits (56), Expect = 7.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 427 SRILDSRSERIRPLSLHASVWEHGIHMLFHSCGLL 323
           S  L S   R++ +SLH S  +H    LF +CG L
Sbjct: 4   SPTLTSHCSRLKCVSLHISKLKHLEDALFPACGAL 38


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,786,306
Number of Sequences: 28581
Number of extensions: 207178
Number of successful extensions: 660
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,141,370
effective HSP length: 90
effective length of database: 9,569,080
effective search space used: 526299400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)