BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= lgn_224862
         (1086 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15520.1                                                           335   2e-92
At5g15390.1                                                            55   5e-08
At2g19870.1                                                            45   6e-05
At4g38020.1                                                            32   0.49 
At4g24480.1                                                            30   1.9  
At5g55720.1                                                            28   7.1  
At3g02330.1                                                            28   9.3  

>At4g15520.1
          Length = 223

 Score =  335 bits (860), Expect = 2e-92
 Identities = 163/215 (75%), Positives = 189/215 (87%), Gaps = 3/215 (1%)
 Frame = +3

Query: 183 ESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVRFRHFHSLAD 362
           ES+V+VHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+RFRHFHSL +
Sbjct: 5   ESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLIE 64

Query: 363 AKTFLKE-RDCDICGVEITENAVAVNEHPFKRSTAFLLGNEGTGLSAKECEICDFFVYIP 539
           A+ +LKE +DCDICGVEI + A AVNEHPFKR+TAFLLGNEG+GLSAKE EICDFFVYIP
Sbjct: 65  ARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIP 124

Query: 540 QYGCGTASLNVTVAASIVLHQFGVWAGFSERTREGNKFIVAERHFKQAKKNYCMESSESV 719
           QYGCGTASLNVTVAASIVLH FGVWAGFSER R+G+KFIVA+R  +Q ++N+C  + ESV
Sbjct: 125 QYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEESV 184

Query: 720 AEERRLKRENLSNGFFEDAGKE--ESPSNLLDTLF 818
            EER+L++E+  NGFF+D G E   S S+LLD LF
Sbjct: 185 IEERKLRKESAENGFFDDNGNENGSSSSDLLDGLF 219


>At5g15390.1
          Length = 351

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
 Frame = +3

Query: 150 YREEMENEKKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVG-----RRDFNAFGSH 314
           +R  +EN +     ++V  ++   N+    RSA A G+  + +V      R + N   S 
Sbjct: 144 FRRVVEN-RSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSM 202

Query: 315 GSTSHVRFRHFHSLADAKTFLKERDCDICGVEITENAVAVNEHPFKRSTAFLLGNEGTGL 494
           G+   +    + +  +    LK R   I    +  + V++ +  +   TA ++GNEG G+
Sbjct: 203 GAEKWLDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGI 262

Query: 495 SAKECEICDFFVYIPQYGCGTASLNVTVAASIVLH--------QFGVWAGFSERTREGNK 650
           S +  E+ D    IP  G    S NV+VAA I++H        + G     SE  +E   
Sbjct: 263 SDEALELSDLRCSIPMNGM-VDSFNVSVAAGILMHHAVSDRTTRLGSHGDLSEAEKE--- 318

Query: 651 FIVAERHFKQAKKNYCM 701
            ++AE   + ++ + C+
Sbjct: 319 ILMAEFSLRHSRSSICI 335


>At2g19870.1
          Length = 590

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 25/168 (14%)
 Frame = +3

Query: 171 EKKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFGSHGSTSHVRFRH 344
           E+K   +V +  +    N+G + RSA  FG + +++  +     +A  S  S   +    
Sbjct: 413 EEKYSLWVALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVME 472

Query: 345 FHSLADAKTFLK---ERDCDICGVEITENAVAVNEHPFKRSTAFLLGNEGTGLSAKECEI 515
                +   FL+   E    + G  ++  AVA+NE      T  +LGNEGTGL       
Sbjct: 473 LRYCKNMMQFLEASAENGWRVVGGSVSPKAVALNEVLPGSPTILVLGNEGTGLRPLVERS 532

Query: 516 CDFFVYIP--------------------QYGCGTASLNVTVAASIVLH 599
           C   V I                     +      SLNV+VAA + LH
Sbjct: 533 CTDLVRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLH 580


>At4g38020.1
          Length = 353

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +3

Query: 450 KRSTAFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLH 599
           ++    +LG+EG GLS +  ++C   V IP  G    SLNV+VA  I L+
Sbjct: 299 EKPLCLILGSEGNGLSEQARKVC-VLVSIPMAG-DFESLNVSVAGGIFLY 346


>At4g24480.1
          Length = 964

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
 Frame = +3

Query: 702 ESSESVAEERRLKRENLSNGFFEDAGKEE-----------SPSNLLDTLFDD*CQGEEK 845
           +SS +V E    +R+N SNG  ED+ KE+           S S+ +  LF D  + E+K
Sbjct: 31  KSSSNVGESFGFQRDNKSNGVGEDSNKEKESTVFSSNPLLSKSSAVSDLFSDDRKSEKK 89


>At5g55720.1
          Length = 393

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 639 EGNKFIVAERHF-KQAKKNYCMESSESVAEER-RLKRENLSNG-FFEDAGKEESPS 797
           +GN FI +   F K+  K    +  E   E   + + + + NG FF  +GKE+SPS
Sbjct: 304 QGNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDSPS 359


>At3g02330.1
          Length = 862

 Score = 28.1 bits (61), Expect = 9.3
 Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = -2

Query: 491 SSTLIAQQESSTSLKRMFIYSNRIFCNFNSTYITISFLEE---GFSIGKGVEVAETDVRS 321
           ++ + A +++    + +F++ + +         T   + +   G S+G G+E+  + V+S
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKS 469

Query: 320 GAVATESVEISTADEY 273
           G  +  SV  S  D Y
Sbjct: 470 GMASNSSVGCSLIDMY 485


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,912,942
Number of Sequences: 28581
Number of extensions: 544554
Number of successful extensions: 1773
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 12,141,370
effective HSP length: 101
effective length of database: 9,254,689
effective search space used: 2406219140
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= stgn_175257
         (1193 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15520.1                                                           333   9e-92
At5g15390.1                                                            54   2e-07
At2g19870.1                                                            44   2e-04
At4g38020.1                                                            32   0.56 
At1g51405.1                                                            29   4.7  
At1g08620.1                                                            28   8.0  
At4g26990.1                                                            28   8.0  

>At4g15520.1
          Length = 223

 Score =  333 bits (855), Expect = 9e-92
 Identities = 162/215 (75%), Positives = 188/215 (87%), Gaps = 3/215 (1%)
 Frame = +2

Query: 137 ESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVRFRHFHSLAD 316
           ES+V+VHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+RFRHFHSL +
Sbjct: 5   ESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLIE 64

Query: 317 AKTFLKE-RDCDICGVEITENAVPVNEHPFKRSTAFLLGNEGTGLSAKECEICDFFVYIP 493
           A+ +LKE +DCDICGVEI + A  VNEHPFKR+TAFLLGNEG+GLSAKE EICDFFVYIP
Sbjct: 65  ARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIP 124

Query: 494 QYGCGTASLNVTVAASIVLHQFGVWAGFSERTREGNKFIVAERPFKQAKKNYCMESSESV 673
           QYGCGTASLNVTVAASIVLH FGVWAGFSER R+G+KFIVA+RP +Q ++N+C  + ESV
Sbjct: 125 QYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEESV 184

Query: 674 AEERRLKRENLSNGFFEVAGKE--ESPSNLLDTLF 772
            EER+L++E+  NGFF+  G E   S S+LLD LF
Sbjct: 185 IEERKLRKESAENGFFDDNGNENGSSSSDLLDGLF 219


>At5g15390.1
          Length = 351

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
 Frame = +2

Query: 146 VLVHNIAKRHNVGTLARSATAFGVSEMILVG-----RRDFNAFGSHGSTSHVRFRHFHSL 310
           ++V  ++   N+    RSA A G+  + +V      R + N   S G+   +    + + 
Sbjct: 157 LVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTP 216

Query: 311 ADAKTFLKERDCDICGVEITENAVPVNEHPFKRSTAFLLGNEGTGLSAKECEICDFFVYI 490
            +    LK R   I    +  + V + +  +   TA ++GNEG G+S +  E+ D    I
Sbjct: 217 KECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCSI 276

Query: 491 PQYGCGTASLNVTVAASIVLH--------QFGVWAGFSERTREGNKFIVAERPFKQAKKN 646
           P  G    S NV+VAA I++H        + G     SE  +E    ++AE   + ++ +
Sbjct: 277 PMNGM-VDSFNVSVAAGILMHHAVSDRTTRLGSHGDLSEAEKE---ILMAEFSLRHSRSS 332

Query: 647 YCM 655
            C+
Sbjct: 333 ICI 335


>At2g19870.1
          Length = 590

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 25/168 (14%)
 Frame = +2

Query: 125 EKKLESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFGSHGSTSHVRFRH 298
           E+K   +V +  +    N+G + RSA  FG + +++  +     +A  S  S   +    
Sbjct: 413 EEKYSLWVALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVME 472

Query: 299 FHSLADAKTFLK---ERDCDICGVEITENAVPVNEHPFKRSTAFLLGNEGTGLSAKECEI 469
                +   FL+   E    + G  ++  AV +NE      T  +LGNEGTGL       
Sbjct: 473 LRYCKNMMQFLEASAENGWRVVGGSVSPKAVALNEVLPGSPTILVLGNEGTGLRPLVERS 532

Query: 470 CDFFVYIP--------------------QYGCGTASLNVTVAASIVLH 553
           C   V I                     +      SLNV+VAA + LH
Sbjct: 533 CTDLVRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLH 580


>At4g38020.1
          Length = 353

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +2

Query: 404 KRSTAFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLH 553
           ++    +LG+EG GLS +  ++C   V IP  G    SLNV+VA  I L+
Sbjct: 299 EKPLCLILGSEGNGLSEQARKVC-VLVSIPMAG-DFESLNVSVAGGIFLY 346


>At1g51405.1
          Length = 488

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 707 KDFPSSVFAPQQQ-IQMIPCSNFSLPV*KVFQPQ*TCSLH--VFSQRIQPKLQIDAEQWK 537
           K++ SS+ AP    +Q + C        K  + +  CS H  V  ++I  +++ +AEQW 
Sbjct: 286 KEYGSSLVAPSSSSVQDMYCKGI-----KAHEEKKDCSRHCKVVMRKIADEVRAEAEQWS 340

Query: 536 QQQ 528
           Q Q
Sbjct: 341 QMQ 343


>At1g08620.1
          Length = 1184

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 969  LLHGGGWLARLLRFPNSNSSTVHSINNLNPRLICF 865
            +L G  W +R   FP    S V  IN L+P  +CF
Sbjct: 964  VLSGKSWCSRRAIFPKGFRSRVKYINILDPTNMCF 998


>At4g26990.1
          Length = 475

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 15/28 (53%), Positives = 15/28 (53%)
 Frame = +2

Query: 677 EERRLKRENLSNGFFEVAGKEESPSNLL 760
           EE  L  E LSNGF   A K  S  NLL
Sbjct: 189 EEDNLMPEPLSNGFHNAAAKPSSTDNLL 216


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,912,840
Number of Sequences: 28581
Number of extensions: 581318
Number of successful extensions: 1761
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 12,141,370
effective HSP length: 102
effective length of database: 9,226,108
effective search space used: 2721701860
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_121467
         (1141 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15520.1                                                           346   1e-95
At5g15390.1                                                            58   9e-09
At2g19870.1                                                            49   7e-06
At4g38020.1                                                            32   0.52 
At5g04190.1                                                            30   3.4  

>At4g15520.1
          Length = 223

 Score =  346 bits (888), Expect = 1e-95
 Identities = 165/216 (76%), Positives = 195/216 (90%), Gaps = 3/216 (1%)
 Frame = +3

Query: 129 YESYVLIHNIAKRHNVGTLARSCTAFGVSELILVGRRDFNAFGSHGSTSHLNFRHFHSLS 308
           +ESYV++HNIAKRHNVGTLARS TAFGV+ELILVGRRDFNAFGSHGS SH+ FRHFHSL 
Sbjct: 4   FESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLI 63

Query: 309 LAKSFLKE-RDCDICGVEITDDAVAVNQHPFKRSTAFLLGNEGTGLSAKECEICDFFVYI 485
            A+++LKE +DCDICGVEI D A AVN+HPFKR+TAFLLGNEG+GLSAKE EICDFFVYI
Sbjct: 64  EARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYI 123

Query: 486 PQYGCGTASLNVTVAASIVLHHFGVWAGFSERTREGNKFVVAERPTKQERKNYCAETTES 665
           PQYGCGTASLNVTVAASIVLHHFGVWAGFSER R+G+KF+VA+RP +Q R+N+CA T ES
Sbjct: 124 PQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEES 183

Query: 666 IVEERRLKRENTSNGFFDESVKDD--SSSNLLDGLF 767
           ++EER+L++E+  NGFFD++  ++  SSS+LLDGLF
Sbjct: 184 VIEERKLRKESAENGFFDDNGNENGSSSSDLLDGLF 219


>At5g15390.1
          Length = 351

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
 Frame = +3

Query: 123 KRYESYVLIHNIAKRHNVGTLARSCTAFGVSELILVG-----RRDFNAFGSHGSTSHLNF 287
           + Y   +++  ++   N+    RS  A G+  + +V      R + N   S G+   L+ 
Sbjct: 151 RSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDI 210

Query: 288 RHFHSLSLAKSFLKERDCDICGVEITDDAVAVNQHPFKRSTAFLLGNEGTGLSAKECEIC 467
             + +       LK R   I    +  D V++    +   TA ++GNEG G+S +  E+ 
Sbjct: 211 EFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELS 270

Query: 468 DFFVYIPQYGCGTASLNVTVAASIVLHH--------FGVWAGFSERTREGNKFVVAERPT 623
           D    IP  G    S NV+VAA I++HH         G     SE  +E    ++AE   
Sbjct: 271 DLRCSIPMNGM-VDSFNVSVAAGILMHHAVSDRTTRLGSHGDLSEAEKE---ILMAEFSL 326

Query: 624 KQERKNYC 647
           +  R + C
Sbjct: 327 RHSRSSIC 334


>At2g19870.1
          Length = 590

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 25/169 (14%)
 Frame = +3

Query: 120 EKRYESYVLIHNIAKRHNVGTLARSCTAFGVSELILVGRRD--FNAFGSHGSTSHLNFRH 293
           E++Y  +V +  +    N+G + RS   FG + +++  +     +A  S  S   L    
Sbjct: 413 EEKYSLWVALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVME 472

Query: 294 FHSLSLAKSFLK---ERDCDICGVEITDDAVAVNQHPFKRSTAFLLGNEGTGLSAKECEI 464
                    FL+   E    + G  ++  AVA+N+      T  +LGNEGTGL       
Sbjct: 473 LRYCKNMMQFLEASAENGWRVVGGSVSPKAVALNEVLPGSPTILVLGNEGTGLRPLVERS 532

Query: 465 CDFFVYIP--------------------QYGCGTASLNVTVAASIVLHH 551
           C   V I                     +      SLNV+VAA + LHH
Sbjct: 533 CTDLVRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLHH 581


>At4g38020.1
          Length = 353

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +3

Query: 399 KRSTAFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLH 548
           ++    +LG+EG GLS +  ++C   V IP  G    SLNV+VA  I L+
Sbjct: 299 EKPLCLILGSEGNGLSEQARKVC-VLVSIPMAG-DFESLNVSVAGGIFLY 346


>At5g04190.1
          Length = 407

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 443 KPRSLITKKKSSASLERMLIHSHSIVRNLHPTYITIP 333
           KPR  + K  S   +   ++HSH  + +  P  +TIP
Sbjct: 157 KPRIAVPKTGSDRIVSNRIVHSHQTISSPEPIRLTIP 193


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,188,720
Number of Sequences: 28581
Number of extensions: 546323
Number of successful extensions: 1564
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1558
length of database: 12,141,370
effective HSP length: 101
effective length of database: 9,254,689
effective search space used: 2572803542
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At4g15520.1
         (669 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15520.1                                                           396   e-111
At5g15390.1                                                            50   1e-06
At2g19870.1                                                            44   8e-05
At4g38020.1                                                            33   0.18 
At1g69830.1                                                            27   7.8  
At1g49040.1                                                            27   7.8  
At1g49040.2                                                            27   7.8  
At3g24390.1                                                            27   7.8  
At4g01760.1                                                            27   7.8  

>At4g15520.1
          Length = 223

 Score =  396 bits (1018), Expect = e-111
 Identities = 195/195 (100%), Positives = 195/195 (100%)
 Frame = +1

Query: 1   MAGFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFH 180
           MAGFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFH
Sbjct: 1   MAGFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFH 60

Query: 181 SLIEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFF 360
           SLIEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFF
Sbjct: 61  SLIEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFF 120

Query: 361 VYIPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGT 540
           VYIPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGT
Sbjct: 121 VYIPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGT 180

Query: 541 EESVIEERKLRKESA 585
           EESVIEERKLRKESA
Sbjct: 181 EESVIEERKLRKESA 195


>At5g15390.1
          Length = 351

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
 Frame = +1

Query: 22  VVVHNIAKRHNVGTLARSATAFGVTELILVG-----RRDFNAFGSHGSASHIRFRHFHSL 186
           +VV  ++   N+    RSA A G+  + +V      R + N   S G+   +    + + 
Sbjct: 157 LVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTP 216

Query: 187 IEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVY 366
            E    LK  +   I    +     ++ +  +   TA ++GNEG G+S +  E+ D    
Sbjct: 217 KECFKVLKS-RGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCS 275

Query: 367 IPQYGCGTASLNVTVAASIVLHH--------FGVWAGFSERVRDGSKFIVADRPVRQGRR 522
           IP  G    S NV+VAA I++HH         G     SE  ++    ++A+  +R  R 
Sbjct: 276 IPMNGM-VDSFNVSVAAGILMHHAVSDRTTRLGSHGDLSEAEKE---ILMAEFSLRHSRS 331

Query: 523 NFCAGTE 543
           + C   E
Sbjct: 332 SICIAYE 338


>At2g19870.1
          Length = 590

 Score = 43.9 bits (102), Expect = 8e-05
 Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 24/166 (14%)
 Frame = +1

Query: 10  FESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRD--FNAFGSHGSASHIRFRHFHS 183
           +  +V +  +    N+G + RSA  FG T +++  +     +A  S  SA  +       
Sbjct: 416 YSLWVALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVMELRY 475

Query: 184 LIEARNYLKE--EKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDF 357
                 +L+   E    + G  ++  A A+NE      T  +LGNEG+GL       C  
Sbjct: 476 CKNMMQFLEASAENGWRVVGGSVSPKAVALNEVLPGSPTILVLGNEGTGLRPLVERSCTD 535

Query: 358 FVYIP--------------------QYGCGTASLNVTVAASIVLHH 435
            V I                     +      SLNV+VAA + LHH
Sbjct: 536 LVRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLHH 581


>At4g38020.1
          Length = 353

 Score = 32.7 bits (73), Expect = 0.18
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +1

Query: 301 LLGNEGSGLSAKEYEICDFFVYIPQYGCGTASLNVTVAASIVLH 432
           +LG+EG+GLS +  ++C   V IP  G    SLNV+VA  I L+
Sbjct: 305 ILGSEGNGLSEQARKVC-VLVSIPMAG-DFESLNVSVAGGIFLY 346


>At1g69830.1
          Length = 888

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 439 GVWAGFSERVRDGSKFIVADRPVRQGRRNFCAG 537
           GVW  F  R+    + +VAD P  QGR N  +G
Sbjct: 595 GVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSG 627


>At1g49040.1
          Length = 1188

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 347 ISYSFADNPDPSLPRRNAVFLLKGCSLTAEAPSAISTPHISQSFSSL 207
           I+Y  ++ P P+  +   +F ++ C L+ EAP   S P    S   L
Sbjct: 164 IAYMVSNVPLPTPGKDRVLFAVENCLLSVEAPPEDSLPQADISLQPL 210


>At1g49040.2
          Length = 910

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 347 ISYSFADNPDPSLPRRNAVFLLKGCSLTAEAPSAISTPHISQSFSSL 207
           I+Y  ++ P P+  +   +F ++ C L+ EAP   S P    S   L
Sbjct: 164 IAYMVSNVPLPTPGKDRVLFAVENCLLSVEAPPEDSLPQADISLQPL 210


>At3g24390.1
          Length = 1116

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +1

Query: 211 EEKDCDICGVEIA---DGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIPQYG 381
           +E+D D+ G   +   D    ++EH    N +    N+G   SA E EI D    I  Y 
Sbjct: 566 KEEDLDVPGEPDSNKEDMQGFIDEHDGANNESDFTANDGLNSSAAEEEILDTGFLIVPYA 625

Query: 382 CGTAS 396
             T S
Sbjct: 626 GSTQS 630


>At4g01760.1
          Length = 668

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 175 FHSLIEARNYLKEEKDCDICGVEIAD 252
           F S ++ +++LK  + CD+CG  I D
Sbjct: 73  FLSRLQRQHWLKVVRSCDLCGKNIGD 98


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,017,511
Number of Sequences: 28581
Number of extensions: 284248
Number of successful extensions: 950
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,141,370
effective HSP length: 96
effective length of database: 9,397,594
effective search space used: 1184096844
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)