BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_147201 (782 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g12590.1 424 e-119 At4g22440.1 32 0.40 At1g03060.1 30 1.5 At1g36105.1 29 2.6 At4g02660.1 28 5.8 At4g26540.1 28 7.6 At4g25270.1 28 7.6 At5g49060.1 28 7.6 At1g56460.1 27 9.9 >At4g12590.1 Length = 247 Score = 424 bits (1090), Expect = e-119 Identities = 210/241 (87%), Positives = 226/241 (93%) Frame = +2 Query: 59 MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMKGSSQIPDPKIVKEGQVIIRARN 238 MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLM+ S+ PD K+VKEGQV+IRARN Sbjct: 1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMR-STPTPDAKMVKEGQVVIRARN 59 Query: 239 LRAGANYIPAKSFRARKAYYSNEENGLLHVPKGQAANPQAQMFSDPNMAMDMMKKNLSMI 418 L+ GAN+IP KSFRAR+ Y+SNEENGLLHVPKG+A NPQA MFSDPNMAMDMMKKNLSMI Sbjct: 60 LKVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMI 119 Query: 419 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVDVSYVSSRSWYFLNLFG 598 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFR+MLQNGIDLSTVDVSYVSSRSWYFLNLFG Sbjct: 120 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 179 Query: 599 LRGLFSLILGEENATDDTQRMMQMSGFGMDPSKTLGAEKDGLDIVQHDWVLPKFELRAES 778 LRGLFSLILG+ENA DDTQRMMQM GFG D SK+LGAEKDGLDI+QH+W LP+FE RAES Sbjct: 180 LRGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAES 239 Query: 779 V 781 V Sbjct: 240 V 240 >At4g22440.1 Length = 89 Score = 32.0 bits (71), Expect = 0.40 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 Query: 125 MVLIGVLRYFVSKLMKGSSQIPDPKIVKEGQ 217 MVLIG++RYFVSKL + S P PK V + Sbjct: 1 MVLIGIIRYFVSKLKRYS---PTPKKVHRSE 28 >At1g03060.1 Length = 3602 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 Query: 44 LSKAKMAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVS 160 LS A M E ++LD + WV P+S+ + L+G L VS Sbjct: 1566 LSNADMVEHVLLDWTL--WVTSPVSIQIALLGFLENLVS 1602 >At1g36105.1 Length = 567 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%) Frame = +2 Query: 2 REKNQIRSKKKERDLSKAKMAEDLV--LDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMKG 175 + K R KK+++ SKA+ ED++ + + D V FV + G Sbjct: 17 KRKRNKREGKKKKNKSKAEDVEDVIDRFEFEVEDSV--------------GNFVDEFSVG 62 Query: 176 SSQIPDPKIVKEGQVIIRARNLR 244 ++IPD E +++R R +R Sbjct: 63 RNEIPDSSDEDEDPIVLRDRRIR 85 >At4g02660.1 Length = 3472 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 44 LSKAKMAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKL 166 LS A M E ++LD + WV P+S+ + +G L +S L Sbjct: 1520 LSNADMVEHVLLDWTL--WVTAPVSIQIASLGFLENLISIL 1558 >At4g26540.1 Length = 1090 Score = 27.7 bits (60), Expect = 7.6 Identities = 23/85 (27%), Positives = 33/85 (38%) Frame = +2 Query: 371 DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVD 550 D N+ + +S + T+ FAW N LT L +L +D Sbjct: 366 DNNLITGEIPSLMSNLRSLTMFFAWQN-------------KLTGNIPQSLSQCRELQAID 412 Query: 551 VSYVSSRSWYFLNLFGLRGLFSLIL 625 +SY S +FGLR L L+L Sbjct: 413 LSYNSLSGSIPKEIFGLRNLTKLLL 437 >At4g25270.1 Length = 528 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +2 Query: 389 DMMK-KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVDVSYVS 565 D++K +N+ +IP +W N +G++ + FR M+QNGI+ V +S V Sbjct: 245 DIVKARNVFDMIPHKDYVSW-NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303 Query: 566 SR 571 +R Sbjct: 304 AR 305 >At5g49060.1 Length = 355 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +2 Query: 365 FSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGI 532 FS+P+ ++ KN S IP+T ++F+ A FPL+ RA L+ + Sbjct: 257 FSEPDYSLH---KNQSYQIPKTTQNTEISFYVRSASAFDEKFPLSSSARANLEGNV 309 >At1g56460.1 Length = 503 Score = 27.3 bits (59), Expect = 9.9 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Frame = +2 Query: 2 REKNQIRSKKKERDLSKAKMAEDLVLDTAIRDWVLIPLSVVMVL---IGVLRYFVSKLMK 172 R+K + + KK++ D +K K A+ + + WV+ P ++ +G+ F S Sbjct: 404 RKKKEDKIKKRQEDKAKEKAADSIARRSDTVKWVMGPSGTIVTFPEELGLPSIFNST--- 460 Query: 173 GSSQIPDPKIVKEGQVIIRARNLRAGANYIPAKSFRARKA 292 P P+ G R + +P S R KA Sbjct: 461 -PHSYPPPRERCAGPECTNPYKYRDSESNLPLCSLRCYKA 499 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,563,035 Number of Sequences: 28581 Number of extensions: 340702 Number of successful extensions: 945 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 911 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 944 length of database: 12,141,370 effective HSP length: 98 effective length of database: 9,340,432 effective search space used: 1513149984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_184006 (779 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g12590.1 424 e-119 At4g22440.1 32 0.40 At1g03060.1 30 1.5 At4g21430.1 29 3.4 At4g02660.1 28 5.8 At5g49060.1 28 7.6 At4g26540.1 28 7.6 At4g25270.1 28 7.6 At2g35170.1 27 9.9 >At4g12590.1 Length = 247 Score = 424 bits (1089), Expect = e-119 Identities = 209/239 (87%), Positives = 225/239 (94%) Frame = +1 Query: 61 MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMKGSSQIPDPKIVKEGQVIIRARN 240 MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLM+ S+ PD K+VKEGQV+IRARN Sbjct: 1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMR-STPTPDAKMVKEGQVVIRARN 59 Query: 241 LRAGANYIPAKSFRARKAYYSNEENGLLHVPKGQAANPQAQMFSDPNMAMDMMKKNLSMI 420 L+ GAN+IP KSFRAR+ Y+SNEENGLLHVPKG+A NPQA MFSDPNMAMDMMKKNLSMI Sbjct: 60 LKVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMI 119 Query: 421 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVDVSYVSSRSWYFLNLFG 600 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFR+MLQNGIDLSTVDVSYVSSRSWYFLNLFG Sbjct: 120 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 179 Query: 601 LRGLFSLILGEENATDDTQRMMQMSGFGMDPSKTLGAEKDGLDIVQHDWVLPKFEQRAE 777 LRGLFSLILG+ENA DDTQRMMQM GFG D SK+LGAEKDGLDI+QH+W LP+FEQRAE Sbjct: 180 LRGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAE 238 >At4g22440.1 Length = 89 Score = 32.0 bits (71), Expect = 0.40 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 127 MVLIGVLRYFVSKLMKGSSQIPDPKIVKEGQ 219 MVLIG++RYFVSKL + S P PK V + Sbjct: 1 MVLIGIIRYFVSKLKRYS---PTPKKVHRSE 28 >At1g03060.1 Length = 3602 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 46 LSKAKMAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVS 162 LS A M E ++LD + WV P+S+ + L+G L VS Sbjct: 1566 LSNADMVEHVLLDWTL--WVTSPVSIQIALLGFLENLVS 1602 >At4g21430.1 Length = 729 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -2 Query: 754 VAPNHAEQCLIRPFLLPKSCWGPYQIRSFASCV 656 V P +QC+ +LP C PYQIR SCV Sbjct: 629 VEPWSFDQCVGEAVILPAGC--PYQIRKNKSCV 659 >At4g02660.1 Length = 3472 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +1 Query: 46 LSKAKMAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKL 168 LS A M E ++LD + WV P+S+ + +G L +S L Sbjct: 1520 LSNADMVEHVLLDWTL--WVTAPVSIQIASLGFLENLISIL 1558 >At5g49060.1 Length = 355 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 367 FSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGI 534 FS+P+ ++ KN S IP+T ++F+ A FPL+ RA L+ + Sbjct: 257 FSEPDYSLH---KNQSYQIPKTTQNTEISFYVRSASAFDEKFPLSSSARANLEGNV 309 >At4g26540.1 Length = 1090 Score = 27.7 bits (60), Expect = 7.6 Identities = 23/85 (27%), Positives = 33/85 (38%) Frame = +1 Query: 373 DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVD 552 D N+ + +S + T+ FAW N LT L +L +D Sbjct: 366 DNNLITGEIPSLMSNLRSLTMFFAWQN-------------KLTGNIPQSLSQCRELQAID 412 Query: 553 VSYVSSRSWYFLNLFGLRGLFSLIL 627 +SY S +FGLR L L+L Sbjct: 413 LSYNSLSGSIPKEIFGLRNLTKLLL 437 >At4g25270.1 Length = 528 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +1 Query: 391 DMMK-KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVDVSYVS 567 D++K +N+ +IP +W N +G++ + FR M+QNGI+ V +S V Sbjct: 245 DIVKARNVFDMIPHKDYVSW-NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303 Query: 568 SR 573 +R Sbjct: 304 AR 305 >At2g35170.1 Length = 485 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 379 LGQRTFAPVDSQLGPWEHGVIHFP 308 LG TF D+Q G WE GV+ P Sbjct: 381 LGMYTFRNGDTQAGHWEDGVLSCP 404 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,449,970 Number of Sequences: 28581 Number of extensions: 333312 Number of successful extensions: 891 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 861 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 890 length of database: 12,141,370 effective HSP length: 98 effective length of database: 9,340,432 effective search space used: 1503809552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_199571 (666 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g12590.1 343 8e-99 At4g25270.1 32 0.31 At4g22440.1 32 0.31 At4g26540.1 28 5.9 At5g49060.1 28 5.9 >At4g12590.1 Length = 247 Score = 343 bits (879), Expect(2) = 8e-99 Identities = 171/192 (89%), Positives = 184/192 (95%) Frame = +3 Query: 36 MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMKGSSQLPDPKIVKEGQVIIRARS 215 MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLM+ S+ PD K+VKEGQV+IRAR+ Sbjct: 1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMR-STPTPDAKMVKEGQVVIRARN 59 Query: 216 LRAGANYIPAKSFRARKAYYSNEENGLLHVPKGQAQNPQAQMFSDPNMAMDMMKKNLSMI 395 L+ GAN+IP KSFRAR+ Y+SNEENGLLHVPKG+AQNPQA MFSDPNMAMDMMKKNLSMI Sbjct: 60 LKVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMI 119 Query: 396 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVDVSYVSSRSWYFLNLFG 575 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFR+MLQNGIDLSTVDVSYVSSRSWYFLNLFG Sbjct: 120 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 179 Query: 576 LRGLFSLILGEE 611 LRGLFSLILG+E Sbjct: 180 LRGLFSLILGDE 191 Score = 35.4 bits (80), Expect(2) = 8e-99 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +2 Query: 611 NATDDTQRMMQMSGFGMD 664 NA DDTQRMMQM GFG D Sbjct: 192 NAIDDTQRMMQMGGFGFD 209 >At4g25270.1 Length = 528 Score = 32.0 bits (71), Expect = 0.31 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = +3 Query: 366 DMMK-KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVDVSYVS 542 D++K +N+ +IP +W N +G++ + FR M+QNGI+ V +S V Sbjct: 245 DIVKARNVFDMIPHKDYVSW-NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303 Query: 543 SRSWYFLNLFGLRGLFSLILGEEMQLTILNA 635 +R F + L G + + G E +L++ NA Sbjct: 304 ARVLSFKHGRQLHG-WVIRRGMEWELSVANA 333 >At4g22440.1 Length = 89 Score = 32.0 bits (71), Expect = 0.31 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +3 Query: 102 MVLIGVLRYFVSKLMKGSSQLPDPKIVKEGQ 194 MVLIG++RYFVSKL + S P PK V + Sbjct: 1 MVLIGIIRYFVSKLKRYS---PTPKKVHRSE 28 >At4g26540.1 Length = 1090 Score = 27.7 bits (60), Expect = 5.9 Identities = 23/85 (27%), Positives = 33/85 (38%) Frame = +3 Query: 348 DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGIDLSTVD 527 D N+ + +S + T+ FAW N LT L +L +D Sbjct: 366 DNNLITGEIPSLMSNLRSLTMFFAWQN-------------KLTGNIPQSLSQCRELQAID 412 Query: 528 VSYVSSRSWYFLNLFGLRGLFSLIL 602 +SY S +FGLR L L+L Sbjct: 413 LSYNSLSGSIPKEIFGLRNLTKLLL 437 >At5g49060.1 Length = 355 Score = 27.7 bits (60), Expect = 5.9 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +3 Query: 342 FSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRAMLQNGI 509 FS+P+ ++ KN S IP+T ++F+ A FPL+ RA L+ + Sbjct: 257 FSEPDYSLH---KNQSYQIPKTTQNTEISFYVRSASAFDEKFPLSSSARANLEGNV 309 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,802,848 Number of Sequences: 28581 Number of extensions: 262906 Number of successful extensions: 709 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 686 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 708 length of database: 12,141,370 effective HSP length: 96 effective length of database: 9,397,594 effective search space used: 1174699250 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_122923 (1314 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g12590.1 416 e-116 At4g22440.1 33 0.28 >At4g12590.1 Length = 247 Score = 416 bits (1069), Expect = e-116 Identities = 211/246 (85%), Positives = 222/246 (90%) Frame = +3 Query: 192 MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSSQLPDPKIVKEGQVIIXXXX 371 MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS+ PD K+VKEGQV+I Sbjct: 1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPT-PDAKMVKEGQVVIRARN 59 Query: 372 XXXXXXFIPAKSFRARKVYYSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 551 FIP KSFRAR+ Y+SNEENGLL VPKG+AQN QA MFSDPNMAMDMMKKNLSMI Sbjct: 60 LKVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMI 119 Query: 552 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 731 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG Sbjct: 120 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 179 Query: 732 LRGLFSLILGEENATDDTQRMMQMSGFGMDPSKSLSAEKDGLDIVQHEWALPKFEQRAEA 911 LRGLFSLILG+ENA DDTQRMMQM GFG D SKSL AEKDGLDI+QHEWALP+FEQRAE+ Sbjct: 180 LRGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAES 239 Query: 912 VLRKLV 929 VLRKLV Sbjct: 240 VLRKLV 245 >At4g22440.1 Length = 89 Score = 33.5 bits (75), Expect = 0.28 Identities = 18/31 (58%), Positives = 21/31 (67%) Frame = +3 Query: 258 MVLIGVLRYFVSKLMRSSSQLPDPKIVKEGQ 350 MVLIG++RYFVSKL R S P PK V + Sbjct: 1 MVLIGIIRYFVSKLKRYS---PTPKKVHRSE 28 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,092,497 Number of Sequences: 28581 Number of extensions: 588229 Number of successful extensions: 1445 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1375 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1444 length of database: 12,141,370 effective HSP length: 103 effective length of database: 9,197,527 effective search space used: 3071974018 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At4g12590.1 (741 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g12590.1 488 e-138 At4g22440.1 38 0.007 At4g15360.1 31 0.63 At3g20140.1 30 1.4 At1g54740.1 28 4.1 At1g80070.1 28 4.1 At4g38780.1 28 5.4 At4g26540.1 28 5.4 At2g40210.1 28 7.0 At1g64590.1 28 7.0 At4g12910.1 27 9.2 At4g36870.1 27 9.2 At4g25270.1 27 9.2 >At4g12590.1 Length = 247 Score = 488 bits (1257), Expect = e-138 Identities = 246/246 (100%), Positives = 246/246 (100%) Frame = +1 Query: 1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 180 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL Sbjct: 1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60 Query: 181 KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 360 KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII Sbjct: 61 KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120 Query: 361 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 540 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180 Query: 541 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 720 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240 Query: 721 LRKLVK 738 LRKLVK Sbjct: 241 LRKLVK 246 >At4g22440.1 Length = 89 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = +1 Query: 67 MVLIGILRYFVSKLMRSTPTP 129 MVLIGI+RYFVSKL R +PTP Sbjct: 1 MVLIGIIRYFVSKLKRYSPTP 21 >At4g15360.1 Length = 528 Score = 31.2 bits (69), Expect = 0.63 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -1 Query: 210 FRRDKISTDFKIPSSNNNLPFFNHLSIRSWSRTHKLRDKVS 88 F++ K S F +PSS +LP HL + THK K+S Sbjct: 29 FKKPKDSRSFVLPSSPPSLPIIGHLHLLLSVLTHKSLQKLS 69 >At3g20140.1 Length = 511 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 210 FRRDKISTD-FKIPSSNNNLPFFNHLSIRSWSRTHKLRDKVS 88 F++ K+S D F +P S +LP HL + + THK K+S Sbjct: 30 FKKPKVSQDGFGLPPSPLSLPIIGHLHLLFSNLTHKSLQKLS 71 >At1g54740.1 Length = 281 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -1 Query: 204 RDKISTDFKIPSSNNNLPFFNHLSIRSWSRTHKLRDKVSQNTD*N--HHYGERNQNPI 37 R K S D + S+N+ F + R W + S+N D N HHY R+++ I Sbjct: 200 RCKSSHDVSVNSNNDVAHFHDDHDTREWMYNSGFKIVASRNHDENNHHHYHHRHRHHI 257 >At1g80070.1 Length = 2383 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/75 (28%), Positives = 32/75 (42%) Frame = +1 Query: 73 LIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNLKVGANFIPPKSFRARRFYFSNEEN 252 LIG++ YF + + D + E ++ R +K+G N P F FY E Sbjct: 1314 LIGLMTYFREATVHTQELLDLLVKCENKIQTR---IKIGLNSKMPSRFPPVIFYTPKEIG 1370 Query: 253 GLLHVPKGEAQNPQA 297 GL + G PQ+ Sbjct: 1371 GLGMLSMGHILIPQS 1385 >At4g38780.1 Length = 2353 Score = 28.1 bits (61), Expect = 5.4 Identities = 21/75 (28%), Positives = 32/75 (42%) Frame = +1 Query: 73 LIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNLKVGANFIPPKSFRARRFYFSNEEN 252 LIG++ YF + + D + E ++ R +K+G N P F FY E Sbjct: 1286 LIGLMTYFREATVHTQELLDLLVKCENKIQTR---VKIGLNSKMPSRFPPVIFYTPKEIG 1342 Query: 253 GLLHVPKGEAQNPQA 297 GL + G PQ+ Sbjct: 1343 GLGMLSMGHILIPQS 1357 >At4g26540.1 Length = 1090 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/85 (27%), Positives = 33/85 (38%) Frame = +1 Query: 310 DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVD 489 D N+ + +S + T+ FAW N LT L +L +D Sbjct: 366 DNNLITGEIPSLMSNLRSLTMFFAWQN-------------KLTGNIPQSLSQCRELQAID 412 Query: 490 VSYVSSRSWYFLNLFGLRGLFSLIL 564 +SY S +FGLR L L+L Sbjct: 413 LSYNSLSGSIPKEIFGLRNLTKLLL 437 >At2g40210.1 Length = 372 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = -2 Query: 734 TSFLNTDSARCSNRGSAHSCWIM--SKPSFSAPRLFDASNPNP 612 T F+NTD + S W+ S P + P+ + NPNP Sbjct: 200 TRFINTDIFKQSKSYYFFDEWVFPPSPPKYEIPQQMENGNPNP 242 >At1g64590.1 Length = 335 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +3 Query: 246 GEWFATCSQGRSSKSTSC 299 G++F+ C++ RSSKS SC Sbjct: 288 GKYFSDCNEARSSKSGSC 305 >At4g12910.1 Length = 485 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 186 DFKIPSSNNNLPFFNHLSIRSWSRTHKL 103 +F++P NN+LP HL+ SWS+ + Sbjct: 104 NFELPKKNNSLPLL-HLNPYSWSKVSNI 130 >At4g36870.1 Length = 639 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = -1 Query: 174 PSSN--NNLPFFNHLSIRSWSRTHKLRDKVSQNTD*NHHYGERNQNPISDRRIEN 16 PS+N ++ + NH+S+ H + Q++ +HH+ +Q I +EN Sbjct: 177 PSTNTTHHQNYTNHMSMHQLPHQHHQQISTWQSSPDHHHHHHNSQTEIGTVHVEN 231 >At4g25270.1 Length = 528 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +1 Query: 328 DMMK-KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVS 504 D++K +N+ +IP +W N +G++ + FR M+QNGI+ V +S V Sbjct: 245 DIVKARNVFDMIPHKDYVSW-NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303 Query: 505 SR 510 +R Sbjct: 304 AR 305 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,230,362 Number of Sequences: 28581 Number of extensions: 308526 Number of successful extensions: 923 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 923 length of database: 12,141,370 effective HSP length: 97 effective length of database: 9,369,013 effective search space used: 1395982937 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)