BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_215678 (972 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g20050.1 292 2e-79 At1g17180.1 32 0.55 At4g18520.1 31 1.2 At2g20000.1 29 4.7 At1g30410.1 29 4.7 At1g10450.1 28 6.1 At3g08960.1 23 6.5 At1g17170.1 28 8.0 At2g40370.1 28 8.0 >At1g20050.1 Length = 224 Score = 292 bits (747), Expect = 2e-79 Identities = 136/215 (63%), Positives = 171/215 (79%) Frame = +1 Query: 91 AHPYVPHDLKLPGFVPLFLSQSEIVGVYGISSVLVVVFMWIFSGFVPKLSKTDRVLMCWW 270 AHPYVP DL LPG+VP+ +S S IV +Y SS+LVV +W+ G K +K D++LMCWW Sbjct: 5 AHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFG--RKKAKLDKLLMCWW 62 Query: 271 IFTGLTHMVLEGYFVFTPDFYQKTSPVYLAEVWKEYSKGDSRYVGRDAAVVSVEGVTAVI 450 FTGLTH++LEGYFVF+P+F++ + YLAEVWKEYSKGDSRYVGRD+AVVSVEG+TAVI Sbjct: 63 TFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITAVI 122 Query: 451 EGPACLLAVYAIATKKAYRHVLQLSICLGQLYGTAIYFITALLEGDNFSTSPFYYYAYYV 630 GPA LLA+YAIA +K+Y +VLQL+I + QLYG +YFITA+LEGDNF+T+ FYYY+YY+ Sbjct: 123 VGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYI 182 Query: 631 FANHFWVWIPSLIVIHCWKKICAAVRVHEQKTKTR 735 AN +WV IPSLI CWKKICAA + +T+ Sbjct: 183 GANCWWVLIPSLISFRCWKKICAAAAIANNNVETK 217 >At1g17180.1 Length = 222 Score = 32.0 bits (71), Expect = 0.55 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -1 Query: 621 SVVIEGACRKIIAFQKSCYEVYSRAIELPQTNG*LKYVP 505 S IE C K+IA+ K C E S A LP + +K+VP Sbjct: 172 SFSIEAECPKLIAWGKRCVERESVAKSLPDSEKIIKFVP 210 >At4g18520.1 Length = 582 Score = 30.8 bits (68), Expect = 1.2 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 167 VYMASHPYWLWCSCGYSQDLFLNYQRL 247 VY+ S WL+C CG S+D F Q+L Sbjct: 384 VYIGSTLVWLYCKCGESRDAFNVLQQL 410 >At2g20000.1 Length = 745 Score = 28.9 bits (63), Expect = 4.7 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -2 Query: 266 QHMSTLSVFDNLGTNPENIHMNTTTSTDEMPYTPTISDCERNRGTK--PGNFRSCGT*G 96 Q+M LS L T E + +T +T Y+P S ++ G K GNF S G G Sbjct: 165 QYMQQLSTSLGLNTYNEERNSTSTKNTSSEDYSPRQSKHTQSHGLKDISGNFHSHGVNG 223 >At1g30410.1 Length = 1496 Score = 28.9 bits (63), Expect = 4.7 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 14/78 (17%) Frame = +1 Query: 250 RVLMCW---------WIFTGLTHMV-----LEGYFVFTPDFYQKTSPVYLAEVWKEYSKG 387 R CW W+ L + + L G F D Q PV L+ + + +G Sbjct: 275 RFQRCWTEESRRPKPWLLRALNNSLGGRFWLAGIFKIGNDLSQFVGPVILSHLLRSMQEG 334 Query: 388 DSRYVGRDAAVVSVEGVT 441 D +VG A + GVT Sbjct: 335 DPAWVGYVYAFIIFVGVT 352 >At1g10450.1 Length = 1174 Score = 28.5 bits (62), Expect = 6.1 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +2 Query: 2 NYSLPFLLHHRSQERV--LKSGTEKKWQAREKLTP 100 +Y + F LH ER+ K +EKKW+A + TP Sbjct: 898 SYYVLFRLHQMLYERIQTAKKHSEKKWKAADNTTP 932 >At3g08960.1 Length = 755 Score = 23.5 bits (49), Expect(2) = 6.5 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = -1 Query: 723 LLLVDADSSTYFLPAVDHYETWYPNPE 643 +LL + YF+ E WY NPE Sbjct: 323 VLLCNVLVRRYFVLTASDLEEWYQNPE 349 Score = 23.1 bits (48), Expect(2) = 6.5 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = -2 Query: 596 EKLSPSKRAVMKYIAVP*SCPKQMDS*STCLYAFLVAIAYTARRHAGPSMTAVTPSTLTT 417 EKL P A+ + ++ S L +V+I A + PS+T +TP+ L Sbjct: 362 EKLRPCAEALYMVL---------FENYSQLLGPIVVSILQEAMNNCPPSVTEITPALLLK 412 Query: 416 AAS 408 A+ Sbjct: 413 DAA 415 >At1g17170.1 Length = 219 Score = 28.1 bits (61), Expect = 8.0 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = -1 Query: 621 SVVIEGACRKIIAFQKSCYEVYSRAIELPQTNG*LKYV 508 +V IE C K++A+ K C E S A LP++ + ++ Sbjct: 171 NVSIESECSKLVAWAKRCLERESVAKALPESEKVITFI 208 >At2g40370.1 Length = 581 Score = 28.1 bits (61), Expect = 8.0 Identities = 10/35 (28%), Positives = 16/35 (45%) Frame = +1 Query: 781 HCHISIFFVWLLSLIVCIRNNTGLLSLFLKSAHSL 885 HCH+ W L++ + N G+L + H L Sbjct: 543 HCHLDAHISWGLAMAFLVENGNGVLQTIEQPPHDL 577 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,602,965 Number of Sequences: 28581 Number of extensions: 510646 Number of successful extensions: 1289 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1288 length of database: 12,141,370 effective HSP length: 100 effective length of database: 9,283,270 effective search space used: 2070169210 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= stgn_174634 (924 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g20050.1 292 2e-79 At2g17860.1 30 1.5 At3g06550.1 30 2.0 At4g18520.1 30 2.6 At1g17180.1 29 3.3 At4g35870.1 28 5.7 At1g30410.1 28 5.7 At5g40480.1 28 5.7 At2g05480.1 28 7.5 At1g04940.1 28 9.7 At5g57040.1 28 9.7 At2g43070.1 28 9.7 At2g20000.1 28 9.7 At1g30420.1 28 9.7 >At1g20050.1 Length = 224 Score = 292 bits (747), Expect = 2e-79 Identities = 136/215 (63%), Positives = 171/215 (79%) Frame = +2 Query: 74 AHPYVPHDLKLPGFVPLFLSQSEIVGVYGISSLLVVVFMWIFSGFVPKLSKTDRVLMCWW 253 AHPYVP DL LPG+VP+ +S S IV +Y SSLLVV +W+ G K +K D++LMCWW Sbjct: 5 AHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFG--RKKAKLDKLLMCWW 62 Query: 254 IFTGLTHMVLEGYFVFTPDFYQKTSPVYLAEVWKEYSKGDSRYVGRDAAVLSVEGVTAVI 433 FTGLTH++LEGYFVF+P+F++ + YLAEVWKEYSKGDSRYVGRD+AV+SVEG+TAVI Sbjct: 63 TFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITAVI 122 Query: 434 EGPACLLAVYAIATKKAYRHVLQLSICLGQLYGTAIYFITAVLEGDNFSTSPFYYYAYYV 613 GPA LLA+YAIA +K+Y +VLQL+I + QLYG +YFITA+LEGDNF+T+ FYYY+YY+ Sbjct: 123 VGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYI 182 Query: 614 FANHFWVWIPSLIVIHCWKKICAAVNVHEQKTKTR 718 AN +WV IPSLI CWKKICAA + +T+ Sbjct: 183 GANCWWVLIPSLISFRCWKKICAAAAIANNNVETK 217 >At2g17860.1 Length = 254 Score = 30.4 bits (67), Expect = 1.5 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Frame = -3 Query: 622 ICKDIVSVVIEGACRKIVAFQDSCYEVYSRAIELPQ--TNG*LKYVPVCLLSSYSIHCKK 449 +C + + V +E A VA + +C A P+ NG C S YS+ KK Sbjct: 165 LCPEQLKVTVEAAGTGAVACKSAC-----EAFGTPEFCCNGAFGTPDTCQPSEYSVFFKK 219 Query: 448 ACWPLYDSC--DPFNTKNCSISAYVS*ITF 365 C Y D +T CS + YV ITF Sbjct: 220 TCPTAYSYAYDDGTSTFTCSGADYV--ITF 247 >At3g06550.1 Length = 420 Score = 30.0 bits (66), Expect = 2.0 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Frame = +1 Query: 763 TLSRFYFFVWLLSLIVF----IRNNAGMEYYLCSRNLLIPAEICHSISMFSVY 909 +L+RF +W L+ +V + NN+ M YY+C + L + ++ + S Y Sbjct: 230 SLARFAQMMWRLNFLVIFSCIVLNNSYMLYYICPMHTLFTLMVYGALGIMSKY 282 >At4g18520.1 Length = 582 Score = 29.6 bits (65), Expect = 2.6 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 12/51 (23%) Frame = +3 Query: 150 VYMASHPYWLWCSCGYSQGLFLNYQRL------------TGCSCAGGFSRA 266 VY+ S WL+C CG S+ F Q+L +GCS G S A Sbjct: 384 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 434 >At1g17180.1 Length = 222 Score = 29.3 bits (64), Expect = 3.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 604 SVVIEGACRKIVAFQDSCYEVYSRAIELPQTNG*LKYVP 488 S IE C K++A+ C E S A LP + +K+VP Sbjct: 172 SFSIEAECPKLIAWGKRCVERESVAKSLPDSEKIIKFVP 210 >At4g35870.1 Length = 818 Score = 28.5 bits (62), Expect = 5.7 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Frame = +2 Query: 338 LAEVWKEYSKGDSRYVGRDAA-VLSVEGVTAVIEGPACLLAVYAIATKKAYRHVLQLSIC 514 L VWK + +R+ G DAA L +EG + V+ +LAV + Y LS Sbjct: 82 LLAVWKATCREIARHCGADAAQFLLIEGGSFVLLFSIAVLAVSVMLPLNLYAGTALLSDE 141 Query: 515 LGQLYGTAIYFITAVLEGDNFSTSPFYYYAYYVFANHFWV 634 L + IT + +G F + V +HF + Sbjct: 142 LSKT------MITHIQKGSALLWLHFVFVVIVVVISHFGI 175 >At1g30410.1 Length = 1496 Score = 28.5 bits (62), Expect = 5.7 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 14/78 (17%) Frame = +2 Query: 233 RVLMCW---------WIFTGLTHMV-----LEGYFVFTPDFYQKTSPVYLAEVWKEYSKG 370 R CW W+ L + + L G F D Q PV L+ + + +G Sbjct: 275 RFQRCWTEESRRPKPWLLRALNNSLGGRFWLAGIFKIGNDLSQFVGPVILSHLLRSMQEG 334 Query: 371 DSRYVGRDAAVLSVEGVT 424 D +VG A + GVT Sbjct: 335 DPAWVGYVYAFIIFVGVT 352 >At5g40480.1 Length = 1920 Score = 28.5 bits (62), Expect = 5.7 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Frame = +2 Query: 86 VPHDLKLPGFVPLFLSQSEIVGVYGISSLLVVVFMWIFSGFVPKLSKTDRVLMCWWIFTG 265 V D ++ G + Q + V +L++ + W SG + SK M W++ +G Sbjct: 313 VVEDTRVAGHI-----QGSSINVVTPDTLILYISPWSMSGDLITESKPFPSSMHWYVVSG 367 Query: 266 LTHMVLEGYFVFTPDFYQ----KTSPVYL----AEVWKEYSKGD---SRYVGRDAAVLS 409 +++ F PD ++ +T + L ++ WK S D S Y R++ +L+ Sbjct: 368 RQYLIQMKIFSGRPDAHEIYITETDDIKLYGKDSDYWKIVSLPDELSSEYGQRNSRILN 426 >At2g05480.1 Length = 238 Score = 28.1 bits (61), Expect = 7.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 783 EIES*QCYSVEAFGYQCLESPQRVLVFCSWTLTAAH 676 E ++ Q + + F +Q L PQ+++ SW LT H Sbjct: 173 EAQNDQAFEFQRF-FQRLTGPQKIIALVSWRLTGIH 207 >At1g04940.1 Length = 502 Score = 27.7 bits (60), Expect = 9.7 Identities = 20/86 (23%), Positives = 35/86 (40%) Frame = +2 Query: 452 LAVYAIATKKAYRHVLQLSICLGQLYGTAIYFITAVLEGDNFSTSPFYYYAYYVFANHFW 631 +A I +K + H + + +G L A+ I V + P Y + F HFW Sbjct: 169 VAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKW-----MPLGVY-WGKFGMHFW 222 Query: 632 VWIPSLIVIHCWKKICAAVNVHEQKT 709 + + + I A+ H+Q+T Sbjct: 223 TAVAFAYLFTVLESIRCALAAHKQRT 248 >At5g57040.1 Length = 198 Score = 27.7 bits (60), Expect = 9.7 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = +3 Query: 174 WLWCSCGYSQGLFL-NYQRLTGCSCAGGFSRA*PTWSLRDISFLLQISTKRLVLFTLLKS 350 WLW + L N LTG GG R ++RD+S L +I K + +T+ KS Sbjct: 119 WLWVGSEMIHLMELPNPDPLTGRPEHGGRDRH-ACIAIRDVSNLKEILDKAGIAYTMSKS 177 Query: 351 GKNTAKVIQDT*AEMLQF 404 G+ A +D A L+F Sbjct: 178 GR-PAIFTRDPDANALEF 194 >At2g43070.1 Length = 544 Score = 27.7 bits (60), Expect = 9.7 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 108 LVLFP-YSSHSQKLLVYMASHPYWLWCSCGYSQGLFLNY 221 L+L P + K+ + S+ Y+LW + GY GL L Y Sbjct: 468 LILAPLFDLRYDKIKKRVISNGYFLWLTIGYGIGLLLTY 506 >At2g20000.1 Length = 745 Score = 27.7 bits (60), Expect = 9.7 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -1 Query: 249 QHMSTLSVFDNLGTNPENIHMNTTTSKD--EMPYTPTISDCERNRGTK--PGNFRSCGT* 82 Q+M LS +LG N N N+T++K+ Y+P S ++ G K GNF S G Sbjct: 165 QYMQQLST--SLGLNTYNEERNSTSTKNTSSEDYSPRQSKHTQSHGLKDISGNFHSHGVN 222 Query: 81 G 79 G Sbjct: 223 G 223 >At1g30420.1 Length = 1489 Score = 27.7 bits (60), Expect = 9.7 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 14/78 (17%) Frame = +2 Query: 233 RVLMCW---------WIFTGLTHMV-----LEGYFVFTPDFYQKTSPVYLAEVWKEYSKG 370 R CW W+ L + + L G F D Q PV L+ + + +G Sbjct: 275 RFQRCWTEESRRPKPWLLRALNNSLGRRFWLGGIFKVGHDLSQFVGPVILSHILQSMIEG 334 Query: 371 DSRYVGRDAAVLSVEGVT 424 D +VG A L GVT Sbjct: 335 DPAWVGYVYAFLIFFGVT 352 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,347,681 Number of Sequences: 28581 Number of extensions: 477272 Number of successful extensions: 1225 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1224 length of database: 12,141,370 effective HSP length: 99 effective length of database: 9,311,851 effective search space used: 1936865008 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_120126 (1138 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g20050.1 188 4e-64 At4g25090.1 32 0.68 At5g32215.1 29 4.4 At3g49310.1 28 7.6 At3g45410.1 28 7.6 At3g16760.2 28 9.9 At5g32293.1 28 9.9 At3g16760.1 28 9.9 >At1g20050.1 Length = 224 Score = 188 bits (477), Expect(2) = 4e-64 Identities = 88/135 (65%), Positives = 108/135 (80%) Frame = +1 Query: 193 EVEHPYVPRDLKLPGFVPAFLPPSTIVGAYLLASLLAVSIVWIGSGRIHKISKLDRILMC 372 E+ HPYVPRDL LPG+VP + S+IV YL +SLL VS+VW+ GR K +KLD++LMC Sbjct: 3 ELAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR--KKAKLDKLLMC 60 Query: 373 WWIFTGLTHMVLEGYFVFTPDFYKKTTSVYLAEVWKEYSKGDSRYAARDSGVVSIEGVTA 552 WW FTGLTH++LEGYFVF+P+F+K TS YLAEVWKEYSKGDSRY RDS VVS+EG+TA Sbjct: 61 WWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITA 120 Query: 553 VLEGPFCFLTLFAIA 597 V+ GP L ++AIA Sbjct: 121 VIVGPASLLAIYAIA 135 Score = 75.5 bits (184), Expect(2) = 4e-64 Identities = 35/70 (50%), Positives = 44/70 (62%) Frame = +3 Query: 600 KKSYRYVIQLAISLGQLYGTIVYFLTSYLDGDNXXXXXXXXXXXXXXXXXXWVLIPTAIS 779 +KSY YV+QLAIS+ QLYG +VYF+T+ L+GDN WVLIP+ IS Sbjct: 137 EKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLIPSLIS 196 Query: 780 VHCWKRICEA 809 CWK+IC A Sbjct: 197 FRCWKKICAA 206 >At4g25090.1 Length = 850 Score = 32.0 bits (71), Expect = 0.68 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 15/82 (18%) Frame = +1 Query: 268 IVGAYLLASLLAVSIVWIGSGRIHK-----ISKLDRILMCWWIFTGLTH---------MV 405 +V +L+ +++ W G++ K + KL W+ TH +V Sbjct: 448 LVMVFLMVIAFTLAMPWFRRGKLEKKLPGPLKKLASFNAFWY-----THHLFVIVYILLV 502 Query: 406 LEGYFVF-TPDFYKKTTSVYLA 468 L GY+++ ++YKKTT +YLA Sbjct: 503 LHGYYIYLNKEWYKKTTWMYLA 524 >At5g32215.1 Length = 912 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 599 AAIANRVRKQKGPSNTAVTPSIETTPESR 513 +A+ R+R Q PSN+ PS +TP+ R Sbjct: 779 SAVEERIRAQPQPSNSITRPSTASTPDLR 807 >At3g49310.1 Length = 461 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 416 ILYLLQTFTRRQPQFTLLKSGRSIAKVIQDTLRVTLELFLLKE 544 I+Y+L T+ PQ+ +L GR + + L E +L+ E Sbjct: 110 IVYILSCITKHSPQYKVLMVGRILGGIATSLLFSAFESWLIAE 152 >At3g45410.1 Length = 665 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/70 (27%), Positives = 34/70 (48%) Frame = +1 Query: 208 YVPRDLKLPGFVPAFLPPSTIVGAYLLASLLAVSIVWIGSGRIHKISKLDRILMCWWIFT 387 Y+ +DL LP F P + +GA++ S+ A+S + + S R +S Sbjct: 609 YLNQDLPLP----IFSPSTPGIGAFMPVSMEALSAIGVSSVRNSSVSMF----------- 653 Query: 388 GLTHMVLEGY 417 +TH +L+G+ Sbjct: 654 -VTHTILDGH 662 >At3g16760.2 Length = 457 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = -2 Query: 768 LGLKPKRHLQGRSMHNSKTSLQQNYPHPSRMSRNIQWCHTAAPKK 634 LG R L G+ S S + P P+ W H APK+ Sbjct: 22 LGSSQGRPLNGQKSQTSSYSSSNSQPRPAWQPGKPSWTHQPAPKQ 66 >At5g32293.1 Length = 912 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 596 AIANRVRKQKGPSNTAVTPSIETTPESR 513 A+ +VR Q PSN+ PS +TP+ R Sbjct: 780 AVEEKVRAQPQPSNSIARPSTASTPDLR 807 >At3g16760.1 Length = 476 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = -2 Query: 768 LGLKPKRHLQGRSMHNSKTSLQQNYPHPSRMSRNIQWCHTAAPKK 634 LG R L G+ S S + P P+ W H APK+ Sbjct: 22 LGSSQGRPLNGQKSQTSSYSSSNSQPRPAWQPGKPSWTHQPAPKQ 66 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,208,739 Number of Sequences: 28581 Number of extensions: 605972 Number of successful extensions: 1533 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1454 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1532 length of database: 12,141,370 effective HSP length: 101 effective length of database: 9,254,689 effective search space used: 2563548853 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g20050.1 (672 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g20050.1 369 e-103 At4g33380.1 33 0.19 At5g26210.1 30 0.93 At1g54930.1 29 2.7 At5g53570.1 28 3.5 At3g46730.1 28 6.0 At2g40070.1 28 6.0 At5g41070.1 27 7.8 At5g56360.1 27 7.8 At5g35430.1 27 7.8 >At1g20050.1 Length = 224 Score = 369 bits (948), Expect = e-103 Identities = 181/223 (81%), Positives = 181/223 (81%) Frame = +1 Query: 1 MEELAHPYVPRDLNLPGYVPXXXXXXXXXXXXXXXXXXXXXXXXXXFGRKKAKLDKLLMC 180 MEELAHPYVPRDLNLPGYVP FGRKKAKLDKLLMC Sbjct: 1 MEELAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGRKKAKLDKLLMC 60 Query: 181 WWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITA 360 WWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITA Sbjct: 61 WWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITA 120 Query: 361 VIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSY 540 VIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSY Sbjct: 121 VIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSY 180 Query: 541 YIGANCWWVLIPSLISFRCWKKICXXXXXXXXXVEXXXXXXXR 669 YIGANCWWVLIPSLISFRCWKKIC VE R Sbjct: 181 YIGANCWWVLIPSLISFRCWKKICAAAAIANNNVETKTKKKTR 223 >At4g33380.1 Length = 329 Score = 32.7 bits (73), Expect = 0.19 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = -1 Query: 555 VSPDVVGVIVERVCGKVVSFQDSSNEINQTSVELANRNRKLKHVAIRLLLSNGINS 388 +SP+V +V+ + ++ SF+D SN V RN KL+ + NG+NS Sbjct: 102 LSPNVKHKLVDEILQRLKSFEDKSNVTQLREVVETWRNEKLEEAKELIQGQNGVNS 157 >At5g26210.1 Length = 256 Score = 30.4 bits (67), Expect = 0.93 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -1 Query: 246 KLRGENEIALENNMSETSECPPTHKQLIKFSFLPPEEKPDEGDNKEGRTEVD 91 K +G+++ ++ NN S S+ + F PE K DE + +EG E D Sbjct: 142 KKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKDDEEEEEEGVEEED 193 >At1g54930.1 Length = 354 Score = 28.9 bits (63), Expect = 2.7 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -1 Query: 561 PTVSPDVVGVIVERVCGKVVSFQDSSNEINQTSVELANRNRKLKHVAIRLLLS 403 P+V+P + VE +CG + +SS++ TS + N N K +H+ R S Sbjct: 188 PSVAPKHLDTQVETLCGNALEAVESSSQ--NTSDLVLNANNKPEHIHQRAATS 238 >At5g53570.1 Length = 551 Score = 28.5 bits (62), Expect = 3.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -1 Query: 222 ALENNMSETSECPPTHKQLIKFSFLPPEEKPDEGDNKEGRTE 97 AL + S+T C L+ SF +EK E DN +E Sbjct: 217 ALNTDSSDTDSCEDNEDVLLLSSFAHSDEKKPEEDNSNNNSE 258 >At3g46730.1 Length = 848 Score = 27.7 bits (60), Expect = 6.0 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = -1 Query: 507 VVSFQDSSNEINQTSVELANRNRKLKHVAIRLLLSNGINS*ERSWANDNSSDPFNRYNCR 328 VV +D ++ V+L + N K K I + G+ + NS D R++CR Sbjct: 162 VVGLED---DVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKRRFDCR 218 Query: 327 ISTYVSR 307 TYVS+ Sbjct: 219 AWTYVSQ 225 >At2g40070.1 Length = 581 Score = 27.7 bits (60), Expect = 6.0 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -2 Query: 407 LAMA*IARREAGPTITAVIPSTDTTAESLPTYLESPLL 294 +A A A A PTI+ + PS+ A+ +PT ++P L Sbjct: 294 IASASAATTTANPTISQIKPSSPAPAKPMPTPSKNPAL 331 >At5g41070.1 Length = 394 Score = 27.3 bits (59), Expect = 7.8 Identities = 12/46 (26%), Positives = 24/46 (52%) Frame = -1 Query: 267 SRSVVLEKLRGENEIALENNMSETSECPPTHKQLIKFSFLPPEEKP 130 ++ +++E+LR N + + + S ++ P HK S +PP P Sbjct: 202 NKDLLIERLRWINLLTNQASSSSSTSTPNQHKNSSFISLIPPPPPP 247 >At5g56360.1 Length = 648 Score = 27.3 bits (59), Expect = 7.8 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 6/100 (6%) Frame = +1 Query: 280 VWKEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAIYAI------AKEKSYSYVLQLA 441 V KEY + S+ S + S+E GP Y+ +K+ Y+Y + Sbjct: 487 VRKEYDESSSKLNKIQSRISSLEKKLKQDFGPEK--EFYSFHGRCFESKQGKYTYKVCAY 544 Query: 442 ISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCW 561 Q G Y T + E D F NS+ + SY G CW Sbjct: 545 KEATQEEG---YSKTRLGEWDKFE-NSYQFMSYTNGEKCW 580 >At5g35430.1 Length = 787 Score = 27.3 bits (59), Expect = 7.8 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -1 Query: 462 VELANRNR--KLKHVAIRLLLSNGINS*ERSWANDNSSD 352 VELA N+ KL R+ LSNGI S +ND+ SD Sbjct: 497 VELAGSNQLSKLSLPLARVCLSNGIYLLNESLSNDSKSD 535 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,174,974 Number of Sequences: 28581 Number of extensions: 246164 Number of successful extensions: 835 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 834 length of database: 12,141,370 effective HSP length: 96 effective length of database: 9,397,594 effective search space used: 1193494438 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)